RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZZEF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055670

Ensembl transcript IDs: ENSMUST00000069395.7, ENSMUST00000172220.8, ENSMUST00000207107.2

Found 1332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCACCCAGTaGCCTAGAGAAGCAGAGGCAGTGGGCTGCAGGTGGCCAGGTCAG +
Preference number: 1 (lower is better)
Translates to: GWGQETLAWLSSATQ*PREAEAVGCRWPGQ
Trigger: CTGACCTGGCCACCTGCAGCCCACTGCCTCTGCTTCTCTAGGCCACTGGGTGGCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp TCCTTTGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTaGCTCAGCAGTGCCACCCAGTGGCCTAGAGAAGCAGAGGCAGTG +
Preference number: 1 (lower is better)
Translates to: SFGTSCPGWGQETLA*LSSATQWPREAEAV
Trigger: CACTGCCTCTGCTTCTCTAGGCCACTGGGTGGCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp GGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTaGCCAGATGGGAGCAGGGGGTGGGCTCAAAGAGAGCTGGGTGCA +
Preference number: 1 (lower is better)
Translates to: GHVAPAVGLFDEAAA*PDGSRGWAQRELGA
Trigger: TGCACCCAGCTCTCTTTGAGCCCACCCCCTGCTCCCATCTGGCCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp GTTTATTTACAGTTGCTCTTCCCGATGGGAGGGTGGGAGGAGAGCTaGGGCCACTGTCCCAAGGGAGGTCTCCAGCCTTGCCCTGCCCTG +
Preference number: 1 (lower is better)
Translates to: VYLQLLFPMGGWEES*GHCPKGGLQPCPAL
Trigger: CAGGGCAGGGCAAGGCTGGAGACCTCCCTTGGGACAGTGGCCCCAGCTCTCCTCCCACCCTCCCATCGGGAAGAGCAACTGTAAATAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp ACAAAGATGTGTGCGGGGAGCTGCTGCACAGTGACAAGCAAAGCCTaGCAGCTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: TKMCAGSCCTVTSKA*QLLPGTPALTVSWP
Trigger: TGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCCCCGCACACATCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp AGGTGGGATATGCCTCTGGCCAGATGCCTGCCCTTCAACAGCAGGTaGCTCAGGATTCTTCCTGAAAGTCCACGGCCTGCTGCTGACCCA +
Preference number: 1 (lower is better)
Translates to: RWDMPLARCLPFNSR*LRILPESPRPAADP
Trigger: TGGGTCAGCAGCAGGCCGTGGACTTTCAGGAAGAATCCTGAGGCACCTGCTGTTGAAGGGCAGGCATCTGGCCAGAGGCATATCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp CTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTaGCAAGAAGATTGCTTGGGAACTGGAGGTGGCTGGGAGGTGCTC +
Preference number: 1 (lower is better)
Translates to: LPGTPALTVSWPAKL*QEDCLGTGGGWEVL
Trigger: GAGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp CTTGCCCTGCCCTGTCCACCTGCTCTCTCTGCTCAGTCTGAGGTGTaGAGGAGTGTGAGTGTGCCATCTCCTCCCCCATCTTCTAACTGC +
Preference number: 1 (lower is better)
Translates to: LALPCPPALSAQSEV*RSVSVPSPPPSSNC
Trigger: GCAGTTAGAAGATGGGGGAGGAGATGGCACACTCACACTCCTCCACACCTCAGACTGAGCAGAGAGAGCAGGTGGACAGGGCAGGGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp TTGGGAACTGGAGGTGGCTGGGAGGTGCTCATGTTGGTTATGGGCTaGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTGCAAGTCTTAC +
Preference number: 1 (lower is better)
Translates to: LGTGGGWEVLMLVMG*CPNWATAAASCKSY
Trigger: GTAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCCAGTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp ATTGCTTGGGAACTGGAGGTGGCTGGGAGGTGCTCATGTTGGTTATaGGCTGGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTGCAAGT +
Preference number: 1 (lower is better)
Translates to: IAWELEVAGRCSCWL*AGVPTGPLLLQAAS
Trigger: ACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 90 bp CCTGTCCACCTGCTCTCTCTGCTCAGTCTGAGGTGTGGAGGAGTGTaGGTGTGCCATCTCCTCCCCCATCTTCTAACTGCTGTGTGGTCT +
Preference number: 1 (lower is better)
Translates to: PVHLLSLLSLRCGGV*VCHLLPHLLTAVWS
Trigger: AGACCACACAGCAGTTAGAAGATGGGGGAGGAGATGGCACACTCACACTCCTCCACACCTCAGACTGAGCAGAGAGAGCAGGTGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp TGGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTGCAAGTCTTACTaGAAAGGTAGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAG +
Preference number: 1 (lower is better)
Translates to: WCPNWATAAASCKSY*KGSSGWMVPSPDGK
Trigger: CTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp ACTGCTGCTGCAAGCTGCAAGTCTTACTGCAAAGGTAGCTCTGGGTaGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTC +
Preference number: 1 (lower is better)
Translates to: TAAASCKSYCKGSSG*MVPSPDGKPRQLPL
Trigger: GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGCTTGCAGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp AAGAAGATTGCTTGGGAACTGGAGGTGGCTGGGAGGTGCTCATGTTaGTTATGGGCTGGTGTCCCAACTGGGCCACTGCTGCTGCAAGCT +
Preference number: 1 (lower is better)
Translates to: KKIAWELEVAGRCSC*LWAGVPTGPLLLQA
Trigger: AGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp AAAGCCTGCCAGCTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTaGCCAGCTAAGCTGTGGCAAGAAGATTGCTTGGGAACTGGAGGT +
Preference number: 1 (lower is better)
Translates to: KACQLLPGTPALTVS*PAKLWQEDCLGTGG
Trigger: ACCTCCAGTTCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAGCTGGCAGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp TTGGTTATGGGCTGGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTaGAAGTCTTACTGCAAAGGTAGCTCTGGGTGGATGGTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: LVMGWCPNWATAAAS*KSYCKGSSGWMVPS
Trigger: AGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 90 bp AAAACAATGAAGGAACAAAGATGTGTGCGGGGAGCTGCTGCACAGTaGCAAGCAAAGCCTGCCAGCTGCTCCCAGGGACACCTGCTCTCA +
Preference number: 1 (lower is better)
Translates to: KTMKEQRCVRGAAAQ*QAKPASCSQGHLLS
Trigger: TGAGAGCAGGTGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCCCCGCACACATCTTTGTTCCTTCATTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 90 bp AGAAGTATAATCAGGTGTGTCCTGACTCCTGAACAAAGGCTCCTCTaGGGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTT +
Preference number: 1 (lower is better)
Translates to: RSIIRCVLTPEQRLL*GHCLHCRCWRAPPF
Trigger: AAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCCTCAGAGGAGCCTTTGTTCAGGAGTCAGGACACACCTGATTATACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp CAACGGGAGACTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTaGTTTGGCAAAGAGCAAAAGGTGAGAAAGAGGTTCCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: QRETSLGFRPLAKRR*FGKEQKVRKRFLWA
Trigger: GGCCCAGAGGAACCTCTTTCTCACCTTTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAGTCTCCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp AGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTaGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATGCAAACTG +
Preference number: 1 (lower is better)
Translates to: RWPGQEGPCPVREQL*CVKKGKLKLILCKL
Trigger: CAGTTTGCATAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp TCCCAAGGCCTCTTGATGCTCTTTCTGAGCCACTCTACACTGCTGTaGCTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAG +
Preference number: 1 (lower is better)
Translates to: SQGLLMLFLSHSTLL*LFGHVAPAVGLFDE
Trigger: CTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGCATCAAGAGGCCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp TCAGTGGAGACAGAATCCTTTCAGAGACGGCTTCCAGGTCTTCAGTaGTGTGACTCCCCTGGAGGAGACTGGCCTCTAGTCTCTATTCTC +
Preference number: 1 (lower is better)
Translates to: SVETESFQRRLPGLQ*CDSPGGDWPLVSIL
Trigger: GAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAGCCGTCTCTGAAAGGATTCTGTCTCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp TTCCTGAAAGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTaGCTCTGGGGAAAAAGGTCATCAGCACACAGGGCAATGCTAAAA +
Preference number: 1 (lower is better)
Translates to: FLKVHGLLLTQHPTL*LWGKRSSAHRAMLK
Trigger: TTTTAGCATTGCCCTGTGTGCTGATGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACTTTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp CGTAGGTGCTTTGGCAAAGAGCAAAAGGTGAGAAAGAGGTTCCTCTaGGCCAGCAGACACCATGTCCAATACCATGGGACCTGGACCAAG +
Preference number: 1 (lower is better)
Translates to: RRCFGKEQKVRKRFL*ASRHHVQYHGTWTK
Trigger: CTTGGTCCAGGTCCCATGGTATTGGACATGGTGTCTGCTGGCCCAGAGGAACCTCTTTCTCACCTTTTGCTCTTTGCCAAAGCACCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 90 bp GGAGACAGAATCCTTTCAGAGACGGCTTCCAGGTCTTCAGTGCTGTaGCTCCCCTGGAGGAGACTGGCCTCTAGTCTCTATTCTCTGAAT +
Preference number: 1 (lower is better)
Translates to: GDRILSETASRSSVL*LPWRRLASSLYSLN
Trigger: ATTCAGAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAGCCGTCTCTGAAAGGATTCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 90 bp TGCTGTGACTCCCCTGGAGGAGACTGGCCTCTAGTCTCTATTCTCTaGATAACTTTCCCAAGGCCTCTTGATGCTCTTTCTGAGCCACTC +
Preference number: 1 (lower is better)
Translates to: CCDSPGGDWPLVSIL*ITFPRPLDALSEPL
Trigger: GAGTGGCTCAGAAAGAGCATCAAGAGGCCTTGGGAAAGTTATTCAGAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGAGTCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp AAAGAGAGCTGGGTGCAGAGGCTTCAGGGGTTTCCTGAGCAAGGTTaGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTCCATG +
Preference number: 1 (lower is better)
Translates to: KESWVQRLQGFPEQG*RSAINPCRQMIKSM
Trigger: CATGGACTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAACCCCTGAAGCCTCTGCACCCAGCTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 90 bp CAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTaGACCATAGGTCACTCCATTTGTTTCTGCTTTTATAACCCATCC +
Preference number: 1 (lower is better)
Translates to: QYHGTWTKFPLMSGW*TIGHSICFCFYNPS
Trigger: GGATGGGTTATAAAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 90 bp GAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATaGAAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGA +
Preference number: 1 (lower is better)
Translates to: EQLWCVKKGKLKLIL*KLKHVEKTASSEWR
Trigger: TCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTTGCATAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGGCACTGCCTGCACTaGAGGTGCTGGAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGHCLH*RCWRAP
Trigger: AGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGCTGCTTGGCCAGATaGGAGCAGGGGGTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGCLAR*EQGVGS
Trigger: TGAGCCCACCCCCTGCTCCCATCTGGCCAAGCAGCC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGCTGGTGTCCCAACTaGGCCACTGCTGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGWCPN*ATAAAS
Trigger: GCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGAACAAAGGCTCCTCTaGGGGCACTGCCTGCACTGC +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLEQRLL*GHCLHC
Trigger: GCAGTGCAGGCAGTGCCCTCAGAGGAGCCTTTGTTC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGCTCCCAGGGACACCTaGTCTCACTGTGAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLAPRDT*SHCELA
Trigger: GGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGGGCTCAAAGAGAGCTaGGTGCAGAGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLGLKES*VQRLQG
Trigger: CCCCTGAAGCCTCTGCACCCAGCTCTCTTTGAGCCC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTGCCTGCACTGCAGGTaGTGGAGAGCCCCTCCATTT +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLCLHCR*WRAPPF
Trigger: AAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGATTGCTTGGGAACTaGAGGTGGCTGGGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRLLGN*RWLGGA
Trigger: AGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCTGTGGCAAGAAGATTaGTTGGGAACTGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCLWQED*LGTGGG
Trigger: GCCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTGCTCATGTTGGTTATaGGCTGGTGTCCCAACTGGG +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCCSCWL*AGVPTG
Trigger: CCCAGTTGGGACACCAGCCCATAACCAACATGAGCA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGACAGCAAGCAGTGAGTaGAGAGGAGCTATGGAGTCC +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLTASSE*RGAMES
Trigger: GGACTCCATAGCTCCTCTCCACTCACTGCTTGCTGT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCCTTCAACAGCAGGTaGCTCAGGATTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPFNSR*LRILPE
Trigger: TTCAGGAAGAATCCTGAGGCACCTGCTGTTGAAGGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCCAATGCAGTCCTTTaGCAACTCCCAGAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCANAVL*QLPEES
Trigger: AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAAAGGTAGCTCTGGGTaGATGGTGCCTTCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLKGSSG*MVPSPD
Trigger: ATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGGCTGGTGTCCCAACTaGGCCACTGCTGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKGWCPN*ATAAAS
Trigger: GCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTGGCCAGCTAAGCTGTaGCAAGAAGATTGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCWPAKL*QEDCLG
Trigger: TCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCTCTGGGTGGATGGTaGCTTCTCCTGATGGCAAGC +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPALGGW*LLLMAS
Trigger: GCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGATGGGAGCAGGGGGTaGGCTCAAAGAGAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKDGSRG*AQRELG
Trigger: ACCCAGCTCTCTTTGAGCCCACCCCCTGCTCCCATC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGCAGTGGGCTGCAGGTaGCCAGGTCAGGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALAVGCR*PGQEGP
Trigger: GGGTCCCTCCTGACCTGGCCACCTGCAGCCCACTGC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGAGCTGCTGCACAGTaGCAAGCAAAGCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGAAAQ*QAKPAS
Trigger: GCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTTCCAGGTCTTCAGTaGTGTGACTCCCCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLPGLQ*CDSPGG
Trigger: TCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGCTCTGGGTGGATGGTaGCTTCTCCTGATGGCAAGC +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKALGGW*LLLMAS
Trigger: GCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCTCCCAGGGACACCTaGTCTCACTGTGAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTAPRDT*SHCELA
Trigger: GGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGTGACAAGCAAAGCCTaGCAGCTGCTCCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKVTSKA*QLLPGT
Trigger: TGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCAC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGGGCACTGCCTGCACTaGAGGTGCTGGAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRGHCLH*RCWRAP
Trigger: AGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATGTGGCGCCTGCAGTaGGCCTTTTTGATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQMWRLQ*AFLMRR
Trigger: CCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTTGGGAACTGGAGGTaGCTGGGAGGTGCTCATGTT +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLGNWR*LGGAHV
Trigger: AACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 90 bp CAAGAAGATTGCTTGGGAACTGGAGGTGGCTGGGAGGTGCTCATGTaGGTTATGGGCTGGTGTCCCAACTGGGCCACTGCTGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: QEDCLGTGGGWEVLM*VMGWCPNWATAAAS
Trigger: GCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGGTGTGGAGGAGTGTaGGTGTGCCATCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRRCGGV*VCHLLP
Trigger: GGGGAGGAGATGGCACACTCACACTCCTCCACACCT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCAAAGAGAGCTGGGTaGAGAGGCTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSKRAG*RGFRGF
Trigger: GAAACCCCTGAAGCCTCTGCACCCAGCTCTCTTTGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCATGCCTCTGGCCAGATaGCTGCCCTTCAACAGCAGG +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTMPLAR*LPFNSR
Trigger: CCTGCTGTTGAAGGGCAGGCATCTGGCCAGAGGCAT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGGGCTCAAAGAGAGCTaGGTGCAGAGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAGLKES*VQRLQG
Trigger: CCCCTGAAGCCTCTGCACCCAGCTCTCTTTGAGCCC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGGCTGGTGTCCCAACTaGGCCACTGCTGCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRGWCPN*ATAAAS
Trigger: GCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGGAACTGGAGGTGGCTaGGAGGTGCTCATGTTGGTT +
Preference number: 2 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQGTGGG*EVLMLV
Trigger: AACCAACATGAGCACCTCCCAGCCACCTCCAGTTCC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGGAACTGGAGGTGGCTaGGAGGTGCTCATGTTGGTT +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKGTGGG*EVLMLV
Trigger: AACCAACATGAGCACCTCCCAGCCACCTCCAGTTCC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGATTGCTTGGGAACTaGAGGTGGCTGGGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: SPRPAADPASYSVALGKKRLLGN*RWLGGA
Trigger: AGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGGAGCTGCTGCACAGTaGCAAGCAAAGCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRGAAAQ*QAKPAS
Trigger: GCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGAACAAAGGCTCCTCTaGGGGCACTGCCTGCACTGC +
Preference number: 2 (lower is better)
Translates to: PAGSGSANAVLCQLPEESEQRLL*GHCLHC
Trigger: GCAGTGCAGGCAGTGCCCTCAGAGGAGCCTTTGTTC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTCCACGGCCTGCTGCTaGCCCAGCATCCTACTCTGT +
Preference number: 2 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLSTACC*PSILLC
Trigger: ACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCCACGGCCTGCTGCTaGCCCAGCATCCTACTCTGT +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMESTACC*PSILLC
Trigger: ACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACCTCAGGATTCTTCCTaGAAGTCCACGGCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAPQDSS*KSTACC
Trigger: GCAGCAGGCCGTGGACTTTCAGGAAGAATCCTGAGG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTCTGAGGGCACTGCCTaGACTGCAGGTGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSEGTA*TAGAGE
Trigger: CTCTCCAGCACCTGCAGTGCAGGCAGTGCCCTCAGA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTCTGGCCAGATGCCTaGCCTTCAACAGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLWPDA*PSTAGA
Trigger: GGCACCTGCTGTTGAAGGGCAGGCATCTGGCCAGAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGACTCTGGCCAGATGCCTaGCCTTCAACAGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRLWPDA*PSTAGA
Trigger: GGCACCTGCTGTTGAAGGGCAGGCATCTGGCCAGAG...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTCTCCAGCCTTGCCCTaGCCTGTCCACCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSPALP*PVHLLS
Trigger: AGAGAGCAGGTGGACAGGGCAGGGCAAGGCTGGAGA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGATGGGAGCAGGGGGTaGGCTCAAAGAGAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRDGSRG*AQRELG
Trigger: ACCCAGCTCTCTTTGAGCCCACCCCCTGCTCCCATC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCAGCTCCCACTCAGTaGAGACAGAATCCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPAAPTQ*RQNPFR
Trigger: TCTGAAAGGATTCTGTCTCCACTGAGTGGGAGCTGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGATTGCTTGGGAACTaGAGGTGGCTGGGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTRLLGN*RWLGGA
Trigger: AGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATGGCCAGCTAAGCTGTaGCAAGAAGATTGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPWPAKL*QEDCLG
Trigger: TCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACACCTGCTCTCACTGTaGGTTGGCCAGCTAAGCTGT +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRHLLSL*VGQLSC
Trigger: ACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGAGCTGCTGCACAGTaGCAAGCAAAGCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKGAAAQ*QAKPAS
Trigger: GCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTCCACGGCCTGCTGCTaGCCCAGCATCCTACTCTGT +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSTACC*PSILLC
Trigger: ACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCAACTGGGCCACTGCTaGTGCAAGCTGCAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTQLGHC*CKLQVL
Trigger: TAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTGACAAGCAAAGCCTaGCAGCTGCTCCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRVTSKA*QLLPGT
Trigger: TGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCAC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGTGACAAGCAAAGCCTaGCAGCTGCTCCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: PAGSGSANAVLCQLPEESVTSKA*QLLPGT
Trigger: TGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCAC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATCTGAGGGCACTGCCTaGACTGCAGGTGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSEGTA*TAGAGE
Trigger: CTCTCCAGCACCTGCAGTGCAGGCAGTGCCCTCAGA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGATGCTCCCACACCTaGAGGTTCAGGTTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTRCSHT*RFRFCQ
Trigger: TTGGCAGAACCTGAACCTGCAGGTGTGGGAGCATCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAATGTGGCGCCTGCAGTaGGCCTTTTTGATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRMWRLQ*AFLMRR
Trigger: CCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACAT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGTAGCTCTGGGTGGATaGTGCCTTCTCCTGATGGCA +
Preference number: 2 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAVALGG*CLLLMA
Trigger: TGCCATCAGGAGAAGGCACCATCCACCCAGAGCTAC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTGCTCATGTTGGTTATaGGCTGGTGTCCCAACTGGG +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTCSCWL*AGVPTG
Trigger: CCCAGTTGGGACACCAGCCCATAACCAACATGAGCA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGGGAGGTGCTCATGTTaGTTATGGGCTGGTGTCCCA +
Preference number: 2 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAGRCSC*LWAGVP
Trigger: TGGGACACCAGCCCATAACCAACATGAGCACCTCCC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGCTCAGTCTGAGGTGTaGAGGAGTGTGAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRAQSEV*RSVSVP
Trigger: TGGCACACTCACACTCCTCCACACCTCAGACTGAGC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 90 bp CTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGCTaGGTCACAGCAAAAGCCAGCCAAATGTGGCCCTGGCTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: LCQLPEESSEAKGAS*VTAKASQMWPWLLG
Trigger: TCCTAAGAGCCAGGGCCACATTTGGCTGGCTTTTGCTGTGACCAAGCTTGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGAACAAAGGCTCCTCTaGGGGCACTGCCTGCACTGC +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILEQRLL*GHCLHC
Trigger: GCAGTGCAGGCAGTGCCCTCAGAGGAGCCTTTGTTC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTGTGTCCTGACTCCTaGACAAAGGCTCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRVCPDS*TKAPLR
Trigger: CCTCAGAGGAGCCTTTGTTCAGGAGTCAGGACACAC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATCAAAGAGAGCTGGGTaGAGAGGCTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ANAVLCQLPEESSEAKGASKRAG*RGFRGF
Trigger: GAAACCCCTGAAGCCTCTGCACCCAGCTCTCTTTGA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACAACTGGGCCACTGCTaGTGCAAGCTGCAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRQLGHC*CKLQVL
Trigger: TAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGCCTGCACTGCAGGTaGTGGAGAGCCCCTCCATTT +
Preference number: 2 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKCLHCR*WRAPPF
Trigger: AAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGATGTGGCGCCTGCAGTaGGCCTTTTTGATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKMWRLQ*AFLMRR
Trigger: CCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACAT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCAGCTCCCACTCAGTaGAGACAGAATCCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTAAPTQ*RQNPFR
Trigger: TCTGAAAGGATTCTGTCTCCACTGAGTGGGAGCTGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGTAGCTCTGGGTGGATaGTGCCTTCTCCTGATGGCA +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALVALGG*CLLLMA
Trigger: TGCCATCAGGAGAAGGCACCATCCACCCAGAGCTAC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCTTGGGAACTGGAGGTaGCTGGGAGGTGCTCATGTT +
Preference number: 2 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLLGNWR*LGGAHV
Trigger: AACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATCCCCTCCCATTCTGTaGCCACTTTTCCTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSPPIL*PLFLCA
Trigger: AGCACACAGGAAAAGTGGCCACAGAATGGGAGGGGA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGCAGTGCCACCCAGTaGCCTAGAGAAGCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSSATQ*PREAEA
Trigger: TGCCTCTGCTTCTCTAGGCCACTGGGTGGCACTGCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACCCCTGTAGACAAATaGTCAAGTCCATGCATATCA +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTPVDK*SSPCIS
Trigger: TGATATGCATGGACTTGATCATTTGTCTACAGGGGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTAGTCTCTATTCTCTaGATAACTTTCCCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLVSIL*ITFPRP
Trigger: AGGCCTTGGGAAAGTTATTCAGAGAATAGAGACTAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAGGTGTGGAGGAGTGTaGGTGTGCCATCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMERCGGV*VCHLLP
Trigger: GGGGAGGAGATGGCACACTCACACTCCTCCACACCT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGCAGCTGTGGTGTGTaGAGAAGGGCAAACTTAAGC +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSSCGV*RRANLS
Trigger: GCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCAAAGAGAGCTGGGTaGAGAGGCTTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSKRAG*RGFRGF
Trigger: GAAACCCCTGAAGCCTCTGCACCCAGCTCTCTTTGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGCTCTGGGTGGATGGTaGCTTCTCCTGATGGCAAGC +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILALGGW*LLLMAS
Trigger: GCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAGGAACAAAGATGTGTaGGGGGAGCTGCTGCACAGT +
Preference number: 2 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLRNKDV*GELLHS
Trigger: ACTGTGCAGCAGCTCCCCGCACACATCTTTGTTCCT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCTCTGGCCAGATGCCTaGCCTTCAACAGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMELWPDA*PSTAGA
Trigger: GGCACCTGCTGTTGAAGGGCAGGCATCTGGCCAGAG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATGCCTCTGGCCAGATaGCTGCCCTTCAACAGCAGG +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILMPLAR*LPFNSR
Trigger: CCTGCTGTTGAAGGGCAGGCATCTGGCCAGAGGCAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAACTGCTGTGCCTTTTTaGACATGTGGCGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRTAVPF*TCGACS
Trigger: ACTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACTGCTGTGCCTTTTTaGACATGTGGCGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMETAVPF*TCGACS
Trigger: ACTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTCCCCTGGAGGAGACTaGCCTCTAGTCTCTATTCTC +
Preference number: 2 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLSPGGD*PLVSIL
Trigger: GAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCCCCTGGAGGAGACTaGCCTCTAGTCTCTATTCTC +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMESPGGD*PLVSIL
Trigger: GAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTGCTCATGTTGGTTATaGGCTGGTGTCCCAACTGGG +
Preference number: 2 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLCSCWL*AGVPTG
Trigger: CCCAGTTGGGACACCAGCCCATAACCAACATGAGCA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCCCCTCCCATTCTGTaGCCACTTTTCCTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMESPPIL*PLFLCA
Trigger: AGCACACAGGAAAAGTGGCCACAGAATGGGAGGGGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGTTGCTCTTCCCGATaGGAGGGTGGGAGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSCSSR*EGGRRA
Trigger: AGCTCTCCTCCCACCCTCCCATCGGGAAGAGCAACT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 90 bp AATTCTATGACTGGGCAGGAAGTGGTGCCAGAAGGCATAGCACCTTaGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCCAATG +
Preference number: 2 (lower is better)
Translates to: NSMTGQEVVPEGIAP*HKMLPHLQVQVLPM
Trigger: CATTGGCAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTCTGGCACCACTTCCTGCCCAGTCATAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGTGTGTCCTGACTCCTaGACAAAGGCTCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILVCPDS*TKAPLR
Trigger: CCTCAGAGGAGCCTTTGTTCAGGAGTCAGGACACAC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCCTCAGGATTCTTCCTaGAAGTCCACGGCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEPQDSS*KSTACC
Trigger: GCAGCAGGCCGTGGACTTTCAGGAAGAATCCTGAGG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTTTGCATTCTGCCTGTaGGGTGGGATATGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKFAFCL*GGICLW
Trigger: CCAGAGGCATATCCCACCTCACAGGCAGAATGCAAA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGAAAACAGCAAGCAGTaGGTGGAGAGGAGCTATGGA +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMEENSKQ*VERSYG
Trigger: TCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGTCACTTCCACACATaGCAGTTTGCCCCTAGGCAT +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRCHFHT*QFAPRH
Trigger: ATGCCTAGGGGCAAACTGGCATGTGTGGAAGTGACA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTGCCTGCACTGCAGGTaGTGGAGAGCCCCTCCATTT +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMECLHCR*WRAPPF
Trigger: AAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGATGCCTCTGGCCAGATaGCTGCCCTTCAACAGCAGG +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEMPLAR*LPFNSR
Trigger: CCTGCTGTTGAAGGGCAGGCATCTGGCCAGAGGCAT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGCGTTTATTTACAGTTaGTCTTCCCGATGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRAFIYS*SSRWEG
Trigger: ACCCTCCCATCGGGAAGAGCAACTGTAAATAAACGC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGACTGCTGTGCCTTTTTaGACATGTGGCGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKTAVPF*TCGACS
Trigger: ACTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAAAGGTAGCTCTGGGTaGATGGTGCCTTCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LSPSRQSCLLRVKGILALKGSSG*MVPSPD
Trigger: ATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAAAGGTAGCTCTGGGTaGATGGTGCCTTCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: PAGSGSANAVLCQLPEESKGSSG*MVPSPD
Trigger: ATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGGCCAGCTAAGCTGTaGCAAGAAGATTGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRWPAKL*QEDCLG
Trigger: TCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGCTCTCACTGTGAGTTaGCCAGCTAAGCTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKALTVS*PAKLWQ
Trigger: TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCAGCATCCTACTCTGTaGCTCTGGGGAAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: PAGSGSANAVLCQLPEESQHPTL*LWGKRS
Trigger: TGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGCTCAGTCTGAGGTGTaGAGGAGTGTGAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILAQSEV*RSVSVP
Trigger: TGGCACACTCACACTCCTCCACACCTCAGACTGAGC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGTCAGAGAGCAGCTGTaGTGTGTGAAGAAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: PSRQSCLLRVKGILALMEVREQL*CVKKGK
Trigger: TTTGCCCTTCTTCACACACCACAGCTGCTCTCTGAC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGTGTGTCCTGACTCCTaGACAAAGGCTCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFVCPDS*TKAPLR
Trigger: CCTCAGAGGAGCCTTTGTTCAGGAGTCAGGACACAC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCTTCCAGGTCTTCAGTaGTGTGACTCCCCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFLPGLQ*CDSPGG
Trigger: TCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGGAACAAAGATGTGTaGGGGGAGCTGCTGCACAGT +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRNKDV*GELLHS
Trigger: ACTGTGCAGCAGCTCCCCGCACACATCTTTGTTCCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGATGCTCCCACACCTaGAGGTTCAGGTTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRCSHT*RFRFCQ
Trigger: TTGGCAGAACCTGAACCTGCAGGTGTGGGAGCATCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGGGAGGTGCTCATGTTaGTTATGGGCTGGTGTCCCA +
Preference number: 2 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFGRCSC*LWAGVP
Trigger: TGGGACACCAGCCCATAACCAACATGAGCACCTCCC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCAGCATCCTACTCTGTaGCTCTGGGGAAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKQHPTL*LWGKRS
Trigger: TGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCACCCCTGTAGACAAATaGTCAAGTCCATGCATATCA +
Preference number: 2 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACTPVDK*SSPCIS
Trigger: TGATATGCATGGACTTGATCATTTGTCTACAGGGGT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCTGTGGCAAGAAGATTaGTTGGGAACTGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMELWQED*LGTGGG
Trigger: GCCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGCAGCTCCCACTCAGTaGAGACAGAATCCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILAAPTQ*RQNPFR
Trigger: TCTGAAAGGATTCTGTCTCCACTGAGTGGGAGCTGC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGCTCTCACTGTGAGTTaGCCAGCTAAGCTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFALTVS*PAKLWQ
Trigger: TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTACAGCATCCTACTCTGTaGCTCTGGGGAAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILQHPTL*LWGKRS
Trigger: TGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTG...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGATAACCTAATTCTATaGCTGGGCAGGAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILDNLIL*LGRKWC
Trigger: GCACCACTTCCTGCCCAGTCATAGAATTAGGTTATC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGCAAAGAGCAAAAGGTaGGAAAGAGGTTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEAKSKR*ERGSSG
Trigger: CCCAGAGGAACCTCTTTCTCACCTTTTGCTCTTTGC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCCCTTCAACAGCAGGTaGCTCAGGATTCTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEPFNSR*LRILPE
Trigger: TTCAGGAAGAATCCTGAGGCACCTGCTGTTGAAGGG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACTTAAGCTCATTCTATaGAAACTGAAGCACGTAGAG +
Preference number: 2 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRLKLIL*KLKHVE
Trigger: CTCTACGTGCTTCAGTTTGCATAGAATGAGCTTAAG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGTGGAGAGGAGCTATaGAGTCCAGCGTTTATTTAC +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSGEEL*SPAFIY
Trigger: GTAAATAAACGCTGGACTCCATAGCTCCTCTCCACT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAACCCCTGTAGACAAATaGTCAAGTCCATGCATATCA +
Preference number: 2 (lower is better)
Translates to: PVREQLWCVKKGKLKLILTPVDK*SSPCIS
Trigger: TGATATGCATGGACTTGATCATTTGTCTACAGGGGT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGGGAGGTCTCCAGCCTaGCCCTGCCCTGTCCACCTG +
Preference number: 3 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLGRSPA*PCPVHL
Trigger: CAGGTGGACAGGGCAGGGCAAGGCTGGAGACCTCCC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCTGCAGTGGGCCTTTTaGATGAGGCGGCTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLLQWAF*MRRLLG
Trigger: GCCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GATGAGGCGGCTGCTTGGCCAGATGGGAGCAGGGGGTaGGCTCAAAGAGAGCTGGGTGCAGAGGCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: DEAAAWPDGSRG*AQRELGAEASG
Trigger: CCCTGAAGCCTCTGCACCCAGCTCTCTTTGAGCCCACCCCCTGCTCCCATCTGGCCAAGCAGCCGCCTCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp ACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTaGCTCAGCAGTGCCACCCAGTGGCCTAGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: TSCPGWGQETLA*LSSATQWPREA
Trigger: TGCTTCTCTAGGCCACTGGGTGGCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCACTGCTGTGCCTTTTaGGACATGTGGCGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCHCCAF*DMWRLQ
Trigger: CTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGTG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp CAGGAGACATTGGCCTGGCTCAGCAGTGCCACCCAGTaGCCTAGAGAAGCAGAGGCAGTGGGCTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: QETLAWLSSATQ*PREAEAVGCRW
Trigger: CCACCTGCAGCCCACTGCCTCTGCTTCTCTAGGCCACTGGGTGGCACTGCTGAGCCAGGCCAATGTCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GGAGGTGGCTGGGAGGTGCTCATGTTGGTTATGGGCTaGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: GGGWEVLMLVMG*CPNWATAAASC
Trigger: GCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GCTTGGGAACTGGAGGTGGCTGGGAGGTGCTCATGTTaGTTATGGGCTGGTGTCCCAACTGGGCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: AWELEVAGRCSC*LWAGVPTGPLL
Trigger: CAGCAGTGGCCCAGTTGGGACACCAGCCCATAACCAACATGAGCACCTCCCAGCCACCTCCAGTTCCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp AGATGGGAGCAGGGGGTGGGCTCAAAGAGAGCTGGGTaGAGAGGCTTCAGGGGTTTCCTGAGCAAGGTTGGA +
Preference number: 3 (lower is better)
Translates to: RWEQGVGSKRAG*RGFRGFLSKVG
Trigger: TCCAACCTTGCTCAGGAAACCCCTGAAGCCTCTGCACCCAGCTCTCTTTGAGCCCACCCCCTGCTCCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTaGCTCTGGGGAAAAAGGTCATCAGCACACAGGGCA +
Preference number: 3 (lower is better)
Translates to: VHGLLLTQHPTL*LWGKRSSAHRA
Trigger: TGCCCTGTGTGCTGATGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp CCCTGTCCACCTGCTCTCTCTGCTCAGTCTGAGGTGTaGAGGAGTGTGAGTGTGCCATCTCCTCCCCCATCT +
Preference number: 3 (lower is better)
Translates to: PCPPALSAQSEV*RSVSVPSPPPS
Trigger: AGATGGGGGAGGAGATGGCACACTCACACTCCTCCACACCTCAGACTGAGCAGAGAGAGCAGGTGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 72 bp AAGGAACAAAGATGTGTGCGGGGAGCTGCTGCACAGTaGCAAGCAAAGCCTGCCAGCTGCTCCCAGGGACAC +
Preference number: 3 (lower is better)
Translates to: KEQRCVRGAAAQ*QAKPASCSQGH
Trigger: GTGTCCCTGGGAGCAGCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCCCCGCACACATCTTTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp GGCTGGTGTCCCAACTGGGCCACTGCTGCTGCAAGCTaGAAGTCTTACTGCAAAGGTAGCTCTGGGTGGATG +
Preference number: 3 (lower is better)
Translates to: GWCPNWATAAAS*KSYCKGSSGWM
Trigger: CATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGCTTGCAGCAGCAGTGGCCCAGTTGGGACACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp TGGGCCAGCAGACACCATGTCCAATACCATGGGACCTaGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACC +
Preference number: 3 (lower is better)
Translates to: WASRHHVQYHGT*TKFPLMSGWWT
Trigger: GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGACATGGTGTCTGCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTGCAGTGGGCCTTTTaGATGAGGCGGCTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLQWAF*MRRLLG
Trigger: GCCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGGAGGTCTCCAGCCTaGCCCTGCCCTGTCCACCTG +
Preference number: 3 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGRSPA*PCPVHL
Trigger: CAGGTGGACAGGGCAGGGCAAGGCTGGAGACCTCCC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp GCAAGTCTTACTGCAAAGGTAGCTCTGGGTGGATGGTaGCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: ASLTAKVALGGW*LLLMASLGSSH
Trigger: GTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GCTGCAAGTCTTACTGCAAAGGTAGCTCTGGGTGGATaGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: AASLTAKVALGG*CLLLMASLGSS
Trigger: GGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTaGGGAAAAAGGTCATCAGCACACAGGGCAATGCTA +
Preference number: 3 (lower is better)
Translates to: GLLLTQHPTLWL*GKRSSAHRAML
Trigger: TAGCATTGCCCTGTGTGCTGATGACCTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp TCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGCTTaGTCACAGCAAAAGCCAGCCAAATGTGGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SQKSLQRPKGQA*SQQKPAKCGPG
Trigger: GCCAGGGCCACATTTGGCTGGCTTTTGCTGTGACCAAGCTTGCCCCTTTGGCCTCTGAAGACTCTTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GTGTGCCATCTCCTCCCCCATCTTCTAACTGCTGTGTaGTCTGAGCCACCGCGAGTGAAGCCTCTTCACCAT +
Preference number: 3 (lower is better)
Translates to: VCHLLPHLLTAV*SEPPRVKPLHH
Trigger: ATGGTGAAGAGGCTTCACTCGCGGTGGCTCAGACCACACAGCAGTTAGAAGATGGGGGAGGAGATGGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATGGCAAGAAGATTGCTaGGGAACTGGAGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAWQEDC*GTGGGW
Trigger: CCAGCCACCTCCAGTTCCCAAGCAATCTTCTTGCCA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp ACAGAATCCTTTCAGAGACGGCTTCCAGGTCTTCAGTaGTGTGACTCCCCTGGAGGAGACTGGCCTCTAGTC +
Preference number: 3 (lower is better)
Translates to: TESFQRRLPGLQ*CDSPGGDWPLV
Trigger: GACTAGAGGCCAGTCTCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAGCCGTCTCTGAAAGGATTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp ACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGAAGATTaGTTGGGAACTGGAGGTGGCTGGGAGGTGCTCATG +
Preference number: 3 (lower is better)
Translates to: TVSWPAKLWQED*LGTGGGWEVLM
Trigger: CATGAGCACCTCCCAGCCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAGCTTAGCTGGCCAACTCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp ATTCTGCCTGTGAGGTGGGATATGCCTCTGGCCAGATaGCTGCCCTTCAACAGCAGGTGCCTCAGGATTCTT +
Preference number: 3 (lower is better)
Translates to: ILPVRWDMPLAR*LPFNSRCLRIL
Trigger: AAGAATCCTGAGGCACCTGCTGTTGAAGGGCAGGCATCTGGCCAGAGGCATATCCCACCTCACAGGCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GCAAGCTGCAAGTCTTACTGCAAAGGTAGCTCTGGGTaGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAG +
Preference number: 3 (lower is better)
Translates to: ASCKSYCKGSSG*MVPSPDGKPRQ
Trigger: CTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCTACCTTTGCAGTAAGACTTGCAGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCACTGCTGTGCCTTTTaGGACATGTGGCGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKHCCAF*DMWRLQ
Trigger: CTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGTG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACTTTCCCAAGGCCTCTaGATGCTCTTTCTGAGCCAC +
Preference number: 3 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALSQGL*MLFLSH
Trigger: GTGGCTCAGAAAGAGCATCAAGAGGCCTTGGGAAAG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 72 bp ATCCTTTCAGAGACGGCTTCCAGGTCTTCAGTGCTGTaGCTCCCCTGGAGGAGACTGGCCTCTAGTCTCTAT +
Preference number: 3 (lower is better)
Translates to: ILSETASRSSVL*LPWRRLASSLY
Trigger: ATAGAGACTAGAGGCCAGTCTCCTCCAGGGGAGTCACAGCACTGAAGACCTGGAAGCCGTCTCTGAAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp CTCTTGATGCTCTTTCTGAGCCACTCTACACTGCTGTaGCTTTTTGGACATGTGGCGCCTGCAGTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: LLMLFLSHSTLL*LFGHVAPAVGL
Trigger: AAGGCCCACTGCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp AACAATGAAGGAACAAAGATGTGTGCGGGGAGCTGCTaGACAGTGACAAGCAAAGCCTGCCAGCTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: NNEGTKMCAGSC*TVTSKACQLLP
Trigger: TGGGAGCAGCTGGCAGGCTTTGCTTGTCACTGTGCAGCAGCTCCCCGCACACATCTTTGTTCCTTCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp ACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTaGCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGG +
Preference number: 3 (lower is better)
Translates to: TPAGSGSANAVL*QLPEESSEAKG
Trigger: CCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp TGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTaGCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTC +
Preference number: 3 (lower is better)
Translates to: CTRCSHTCRFRF*QCSPLPTPRRV
Trigger: GACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTaGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTA +
Preference number: 3 (lower is better)
Translates to: GQEGPCPVREQL*CVKKGKLKLIL
Trigger: TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCTGCAGTGGGCCTTTTaGATGAGGCGGCTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFLQWAF*MRRLLG
Trigger: GCCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGGCAAGAAGATTGCTaGGGAACTGGAGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKWQEDC*GTGGGW
Trigger: CCAGCCACCTCCAGTTCCCAAGCAATCTTCTTGCCA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGCTGTGGCAAGAAGATaGCTTGGGAACTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKAVARR*LGNWRW
Trigger: CCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAGC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGCTGTGGCAAGAAGATaGCTTGGGAACTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKAVARR*LGNWRW
Trigger: CCACCTCCAGTTCCCAAGCAATCTTCTTGCCACAGC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCTGATCACCATGACCTaGGAGCAGAAGTATAATCAG +
Preference number: 3 (lower is better)
Translates to: SPRPAADPASYSVALGKKLITMT*EQKYNQ
Trigger: CTGATTATACTTCTGCTCCAAGGTCATGGTGATCAG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 72 bp TTGGAGCAGAAGTATAATCAGGTGTGTCCTGACTCCTaGACAAAGGCTCCTCTGAGGGCACTGCCTGCACTG +
Preference number: 3 (lower is better)
Translates to: LEQKYNQVCPDS*TKAPLRALPAL
Trigger: CAGTGCAGGCAGTGCCCTCAGAGGAGCCTTTGTTCAGGAGTCAGGACACACCTGATTATACTTCTGCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp AGATGCTCCCACACCTGCAGGTTCAGGTTCTGCCAATaGAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGA +
Preference number: 3 (lower is better)
Translates to: RCSHTCRFRFCQ*SPLPTPRRVFR
Trigger: TCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTGGGAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCTTTCCCAAGGCCTCTaGATGCTCTTTCTGAGCCAC +
Preference number: 3 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKLSQGL*MLFLSH
Trigger: GTGGCTCAGAAAGAGCATCAAGAGGCCTTGGGAAAG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTGGCAAGAAGATTGCTaGGGAACTGGAGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEWQEDC*GTGGGW
Trigger: CCAGCCACCTCCAGTTCCCAAGCAATCTTCTTGCCA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp TTTGGCAAAGAGCAAAAGGTGAGAAAGAGGTTCCTCTaGGCCAGCAGACACCATGTCCAATACCATGGGACC +
Preference number: 3 (lower is better)
Translates to: FGKEQKVRKRFL*ASRHHVQYHGT
Trigger: GGTCCCATGGTATTGGACATGGTGTCTGCTGGCCCAGAGGAACCTCTTTCTCACCTTTTGCTCTTTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACTGATCACCATGACCTaGGAGCAGAAGTATAATCAG +
Preference number: 3 (lower is better)
Translates to: PSRQSCLLRVKGILALMELITMT*EQKYNQ
Trigger: CTGATTATACTTCTGCTCCAAGGTCATGGTGATCAG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp ACTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTaGTTTGGCAAAGAGCAAAAGGTGAGAAAGAGGTTC +
Preference number: 3 (lower is better)
Translates to: TSLGFRPLAKRR*FGKEQKVRKRF
Trigger: GAACCTCTTTCTCACCTTTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp CTTTATAGATTAGGCACATGTTTCCACGACCCCTTATaGCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: LYRLGTCFHDPL*LPVLSPSRQSC
Trigger: GCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTCGTGGAAACATGTGCCTAATCTATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp GGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTaGACCATAGGTCACTCCATTTGTTTCTGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: GTWTKFPLMSGW*TIGHSICFCFY
Trigger: ATAAAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR TCA 72 bp TCCCCTGGAGGAGACTGGCCTCTAGTCTCTATTCTCTaGATAACTTTCCCAAGGCCTCTTGATGCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SPGGDWPLVSIL*ITFPRPLDALS
Trigger: AGAAAGAGCATCAAGAGGCCTTGGGAAAGTTATTCAGAGAATAGAGACTAGAGGCCAGTCTCCTCCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CCA 72 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTaGAGAGGAGCTATGGAGTCCAGCGTTTATTTACAG +
Preference number: 3 (lower is better)
Translates to: KLKHVEKTASSE*RGAMESSVYLQ
Trigger: CTGTAAATAAACGCTGGACTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR GCA 72 bp TGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATaGAAACTGAAGCACGTAGAGAAAACAGCAAGCAGT +
Preference number: 3 (lower is better)
Translates to: WCVKKGKLKLIL*KLKHVEKTASS
Trigger: ACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTTGCATAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGAGTCGCCCTCGGGTaGAAGGAGGCCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGVALG*KEASGW
Trigger: CCACCCGGAGGCCTCCTTTCACCCGAGGGCGACTCC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCCCAACCGTTCAGCTaGCTCCTGGCGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCAQPFS*LLAGAE
Trigger: CTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCAGCCTCAGACTCCTaGTGGGTTGCCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPASDS*WVATSG
Trigger: CCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGCTGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTCACTCACTGGCACATaGCCTGGCCACTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLSLTGT*PGHSAS
Trigger: GCTGGCCGAGTGGCCAGGGCATGTGCCAGTGAGTGA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGCCTCCGGGTGGGTGTaGATGGTGGTGAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLASGWV*MVVRAL
Trigger: AAGAGCCCTCACCACCATCCACACCCACCCGGAGGC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCCTCAGACTCCTGCTaGGTTGCCACCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCASDSC*VATSGP
Trigger: TGGCCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTGGCTCAGCTCCCCCTaGAGATTGGCTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLWLSSP*RLAPLE
Trigger: CTCCAGTGGAGCCAATCTTCAGGGGGAGCTGAGCCA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCGGGTATTTCTCCTTaGCTGTGGGGACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPGISP*LWGLAW
Trigger: CCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGCCTCTGCCGGTCACTaGTGCGGATGGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLASAGH*CGWSPL
Trigger: CAATGGTGACCATCCGCATCAGTGACCGGCAGAGGC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGGACAGGACCCAGGTTaGTTCCACTGCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLGQDPG*FHCLGT
Trigger: TGTCCCGAGGCAGTGGAAGCAACCTGGGTCCTGTCC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAGACTCCTGCTGGGTTaGCACCTCTGGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLRLLLG*HLWAKE
Trigger: CTCCTTGGCCCAGAGGTGGCAACCCAGCAGGAGTCT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGACTCCTGCTGGGTTaGCACCTCTGGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRLLLG*HLWAKE
Trigger: CTCCTTGGCCCAGAGGTGGCAACCCAGCAGGAGTCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCTGTGGGACCCGACTTaGTGGGAGGTAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLLWDPT*WEVTWL
Trigger: CAGCCATGTTACCTCCCATCAAGTCGGGTCCCACAG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGCTTGTGGGTCACCCTaGAGCACTGAGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLACGSP*STEKQL
Trigger: GAGCTGCTTCTCAGTGCTGCAGGGTGACCCACAAGC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCTTGTGGGTCACCCTaGAGCACTGAGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCACGSP*STEKQL
Trigger: GAGCTGCTTCTCAGTGCTGCAGGGTGACCCACAAGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTGCTCCGGCGCTGCTTaGCATAGCTCTGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLCSGAA*HSSAVA
Trigger: AGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGGAGCAGGTTCTGCCTaGCAGATGCCATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLGAGSA*QMPWMR
Trigger: TCTCATCCATGGCATCTGTCAGGCAGAACCTGCTCC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGAGTCGCCCTCGGGTaGAAGGAGGCCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGVALG*KEASGW
Trigger: CCACCCGGAGGCCTCCTTTCACCCGAGGGCGACTCC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGATCTGCCTGCTCCTCTaGTGCCTGGAAGGACACTGT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLICLLL*CLEGHC
Trigger: ACAGTGTCCTTCCAGGCATCAGAGGAGCAGGCAGAT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCGGGGCATTGTTGAGTaGCCGAAGGATCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRGIVE*PKDLCH
Trigger: ATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTGTGCAGAGGGGCATTaGGGGCATCATGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCCAEGH*GHHEPS
Trigger: TGATGGCTCATGATGCCCTCAATGCCCCTCTGCACA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCCAGGTTGCTTCCACTaGCTCGGGACAATGGCTATC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCPGCFH*LGTMAI
Trigger: GATAGCCATTGTCCCGAGGCAGTGGAAGCAACCTGG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCAGCCAGGACTTCACTaGTGTTCATGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCQPGLH*CSWWPG
Trigger: ACCTGGCCACCATGAACACCAGTGAAGTCCTGGCTG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCATGGCGAGCTCTTTaGCTGCAGCATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPWRAL*LQHLCS
Trigger: AGAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCGGATGGTCACCATTaGATGGGCTGTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCADGHH*MGCDAV
Trigger: CACAGCATCACAGCCCATCCAATGGTGACCATCCGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTGCTCCTCTGATGCCTaGAAGGACACTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCCSSDA*KDTVTG
Trigger: GCCAGTCACAGTGTCCTTCCAGGCATCAGAGGAGCA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGGGAGGCGAGCACATaGCGAGCATATAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCREAST*RAYRTE
Trigger: CTCAGTCCTATATGCTCGCCATGTGCTCGCCTCCCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTCTCTTCCATGGATCTaGAAGAGAGCAGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLSLPWI*KRAAGV
Trigger: GACTCCGGCTGCTCTCTTTCAGATCCATGGAAGAGA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACCAGCCCTCACCCCCTaGGGCCGCCGCTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRPALTP*GRRFVF
Trigger: GAAGACGAAGCGGCGGCCGCAGGGGGTGAGGGCTGG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGTGAGTGGGCCAGCTTaGTTCCAATTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLVSGPA*FQFQLW
Trigger: CCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCAC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACCAGCCTCAGACTCCTaGTGGGTTGCCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPPASDS*WVATSG
Trigger: CCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGCTGG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCATCTCTGGGCTTCTaGCTAGATCTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPSLGF*LDLQGF
Trigger: AAAGCCCTGGAGATCTAGCCAGAAGCCCAGAGATGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAAGGAGGCCTCCGGGTaGGTGTGGATGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPKEASG*VWMVVR
Trigger: CCTCACCACCATCCACACCCACCCGGAGGCCTCCTT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACTGGCTCCTCAGGGTaGCAGCATTGGTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTGSSG*QHWCGP
Trigger: AGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCGGTCTGGAGGAAGGTaGCATGGGTCTCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRSGGR*HGSLQN
Trigger: GTTTTGAAGAGACCCATGCCACCTTCCTCCAGACCG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCACTGGCACATGCCCTaGCCACTCGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKHWHMP*PLGQQG
Trigger: TCCCTGCTGGCCGAGTGGCCAGGGCATGTGCCAGTG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGAACTGCTCCAGGGTaGCGGACTCTTCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGTAPG*RTLHRG
Trigger: GCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCAAGACCAGCCCACACTaGGCACCAATGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLKTSPH*APMPPR
Trigger: CCGTGGTGGCATTGGTGCTCAGTGTGGGCTGGTCTT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCCGGAGGTACCCACTaGTGCTTAAGCCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPAGGTH*CLSLAR
Trigger: GCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGGAAGATGACCAGTTaGCGAGCTGCCATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRKMTS*RAAMEN
Trigger: GTTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCCATCCTTGTGTGGGTaGGTGGGCCAGCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLPSLCG*VGQLAS
Trigger: GGAAGCAAGCTGGCCCACTCACCCACACAAGGATGG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACCATCCTTGTGTGGGTaGGTGGGCCAGCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPPSLCG*VGQLAS
Trigger: GGAAGCAAGCTGGCCCACTCACCCACACAAGGATGG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGTGGCGTTCACAGCTTaGTCAATAGTGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCVAFTA*SIVEPA
Trigger: TGCTGGTTCCACTATTGATCAAGCTGTGAACGCCAC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCCGGGTATTTCTCCTTaGCTGTGGGGACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLPGISP*LWGLAW
Trigger: CCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTACCAGTACCTGAGCTaGCACTTCTGGATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLYQYLS*HFWMFS
Trigger: GCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCCAGCCCTCACCCCCTaGGGCCGCCGCTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESPALTP*GRRFVF
Trigger: GAAGACGAAGCGGCGGCCGCAGGGGGTGAGGGCTGG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCACATCACGAACTTCCTaGAGGTCACTGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCTSRTS*RSLALL
Trigger: AAGGAGTGCCAGTGACCTGCAGGAAGTTCGTGATGT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCACATTGCTGGGGATGTaGACATCACGAACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCTLLGM*TSRTSC
Trigger: GCAGGAAGTTCGTGATGTGCACATCCCCAGCAATGT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAGCTGCTGGATGAACTaGAGAGTCCTAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLSCWMN*RVLRSR
Trigger: CCTGCTTCTTAGGACTCTGCAGTTCATCCAGCAGCT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGGGTGGCAGCATTGGTaGGGGCCTGGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRGWQHW*GPGGPA
Trigger: AGCTGGACCCCCAGGCCCGCACCAATGCTGCCACCC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCAGACTCCTGCTGGGTTaGCACCTCTGGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLRLLLG*HLWAKE
Trigger: CTCCTTGGCCCAGAGGTGGCAACCCAGCAGGAGTCT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACCAGCCTCAGACTCCTaGTGGGTTGCCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQPASDS*WVATSG
Trigger: CCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGCTGG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGTAGTAGCTTTGGCTaGATCTCTAAGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGSSFG*ISKAGL
Trigger: GAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACCAGCTGCATGCACTaGCTCCTCAGGGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTSCMH*LLRVAA
Trigger: TGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTCTGAAACCTGGGTCTaGCATGAAGGGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSETWV*HEGSFT
Trigger: AGTGAAGGACCCTTCATGCCAGACCCAGGTTTCAGA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGATTCAGGAGTGGCTTaGTCAGAGCGTGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPDSGVA*SERAGR
Trigger: CCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp GCCTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTaGATGAGGCGGCTGCTTGGCCAGATGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AFLDMWRLQWAF*MRRLLGQMGAG
Trigger: CCCTGCTCCCATCTGGCCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTGGCTCAGCTCCCCCTaGAGATTGGCTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKWLSSP*RLAPLE
Trigger: CTCCAGTGGAGCCAATCTTCAGGGGGAGCTGAGCCA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAAGACCAGCCCACACTaGGCACCAATGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKKTSPH*APMPPR
Trigger: CCGTGGTGGCATTGGTGCTCAGTGTGGGCTGGTCTT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGTCACCCTGCAGCACTaGGAAGCAGCTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKVTLQH*EAALQE
Trigger: CTCCTGCAGAGCTGCTTCTCAGTGCTGCAGGGTGAC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGTCACCCTGCAGCACTaGGAAGCAGCTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQVTLQH*EAALQE
Trigger: CTCCTGCAGAGCTGCTTCTCAGTGCTGCAGGGTGAC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACAGCATCTGTGCTCTTaGGCTGCAGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPQHLCS*AAGSTR
Trigger: CCTGGTGCTTCCTGCAGCTCAAGAGCACAGATGCTG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGAGTCGCCCTCGGGTaGAAGGAGGCCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKGVALG*KEASGW
Trigger: CCACCCGGAGGCCTCCTTTCACCCGAGGGCGACTCC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCCGGGTATTTCTCCTTaGCTGTGGGGACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKPGISP*LWGLAW
Trigger: CCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCTGAAAGGACCTTCATaGCTGCAGCATCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLLKGPS*LQHLLL
Trigger: CAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGGAGCCAGGTTTTACTaGAGCCGGTCCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLGARFY*SRSLCC
Trigger: GCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTTCCGCTTCTGCCCTTaGAGGCCGGAGGTACCCACT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKFRFCP*RPEVPT
Trigger: AGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATGCAATACCACAGGCTaGTCCTGCTGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPCNTTG*SCCQVS
Trigger: GGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGGTGGCAGCATTGGTaGGGGCCTGGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGWQHW*GPGGPA
Trigger: AGCTGGACCCCCAGGCCCGCACCAATGCTGCCACCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCTTCTGGGAACACTCTaGAAACACTTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCLLGTL*KHLLRV
Trigger: AACCCTGAGCAAGTGTTTGCAGAGTGTTCCCAGAAG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAATGTAGGTCATATGTaGAGGGCCACTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLNVGHM*RATKLQ
Trigger: CTGGAGCTTAGTGGCCCTGCACATATGACCTACATT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGAAGTCCGTAGATCCTaGAGAGAGGGACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPEVRRS*REGQRW
Trigger: CCACCGCTGTCCCTCTCTCCAGGATCTACGGACTTC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGTCAGCTCTACCTCTaGAGTAGAACAGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSQLYL*SRTAAS
Trigger: ACTAGCTGCTGTTCTACTCCAGAGGTAGAGCTGACT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTCATGGGAAAGCTGCTaGATGAACTGCAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSWESC*MNCRVL
Trigger: TAGGACTCTGCAGTTCATCCAGCAGCTTTCCCATGA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAAATCAAGGAGAAAATaGCGGCAGGGATCATCAGGG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCKSRRK*RQGSSG
Trigger: CCCTGATGATCCCTGCCGCCATTTTCTCCTTGATTT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCCTCCGGGTGGGTGTaGATGGTGGTGAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTASGWV*MVVRAL
Trigger: AAGAGCCCTCACCACCATCCACACCCACCCGGAGGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCATCAAACCCTGGCAGTaGTCACACGTAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCIKPWQ*SHVNSM
Trigger: CATGGAGTTTACGTGTGACCACTGCCAGGGTTTGAT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGATTCAGGAGTGGCTTaGTCAGAGCGTGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQDSGVA*SERAGR
Trigger: CCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAGGCAGCCAAGGCCATaGTGCCCAGCATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPRQPRP*CPACSL
Trigger: GAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCACTACTGCTGGACATaGCTAGTTCATCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLHYCWT*LVHHSL
Trigger: AAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCGGGTGGCCTTGTTTaGGTAGTTGATGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPAGGLV*VVDGQA
Trigger: AGCCTGGCCATCAACTACCCAAACAAGGCCACCCGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGAACTGCTCCAGGGTaGCGGACTCTTCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGTAPG*RTLHRG
Trigger: GCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGGACATAGAGCTGACTaGTGTTGGCATTTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCGHRAD*CWHFLA
Trigger: TGCTAGAAAATGCCAACATCAGTCAGCTCTATGTCC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGCCCAACCGTTCAGCTaGCTCCTGGCGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRAQPFS*LLAGAE
Trigger: CTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGCCAGGGAATACACCTaGGAGAACTCCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLAREYT*ENSSVR
Trigger: CCTGACTGAGGAGTTCTCTCAGGTGTATTCCCTGGC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGGTGTGGATGGTGGTaGGGGCTCTTCAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGCGWW*GLFSCG
Trigger: TCCACAGCTGAAGAGCCCTCACCACCATCCACACCC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCCTCTGCCGGTCACTaGTGCGGATGGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTASAGH*CGWSPL
Trigger: CAATGGTGACCATCCGCATCAGTGACCGGCAGAGGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGTCCTGGAGGCACGTaGGCACTGGCAGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSPGGT*ALAGAS
Trigger: AGATGCACCTGCCAGTGCTCACGTGCCTCCAGGACT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCATCAAACCTCTTCTaGACCTCTAGGAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPSNLF*TSRKNE
Trigger: TTCGTTCTTCCTAGAGGTTCAGAAGAGGTTTGATGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTGACTCCTGGCGGGTaGAGAGGAACTTCACCATCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLTPGG*RGTSPS
Trigger: TGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCATTCCCTCAGAGCGTTaGGCTGTAGGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLIPSER*AVGFSS
Trigger: GGAGGAGAAGCCTACAGCGCAACGCTCTGAGGGAAT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCTGTGCTCTTGAGCTaGAGGAAGCACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSVLLS*RKHQES
Trigger: GCTCTCCTGGTGCTTCCTGCAGCTCAAGAGCACAGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGAGGACTCCTGTCACCTaGAGCTGGGGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWRTPVT*SWGGCF
Trigger: GAAGCAGCCACCCCAGCTGCAGGTGACAGGAGTCCT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGGACTCCTGTCACCTaGAGCTGGGGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTRTPVT*SWGGCF
Trigger: GAAGCAGCCACCCCAGCTGCAGGTGACAGGAGTCCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGCCCGAGGGATTCTGTaGAATACTGAATTATCCTCA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCARGIL*NTELSS
Trigger: TGAGGATAATTCAGTATTGCACAGAATCCCTCGGGC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGCCCGAGGGATTCTGTaGAATACTGAATTATCCTCA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLARGIL*NTELSS
Trigger: TGAGGATAATTCAGTATTGCACAGAATCCCTCGGGC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCCCAACCAGCTGCATaGACTGGCTCCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPQPAA*TGSSGW
Trigger: CCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGGCCTGCATCTGCCTaGTCCTCTGATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKRPASA*SSDAWK
Trigger: CTTCCAGGCATCAGAGGAGCAGGCAGATGCAGGCCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACCAGGTTGCTTCCACTaGCTCGGGACAATGGCTATC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPPGCFH*LGTMAI
Trigger: GATAGCCATTGTCCCGAGGCAGTGGAAGCAACCTGG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCCAGGTTGCTTCCACTaGCTCGGGACAATGGCTATC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLPGCFH*LGTMAI
Trigger: GATAGCCATTGTCCCGAGGCAGTGGAAGCAACCTGG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCAGTTCAGCTCCTTGTaGAGGAGGGCAGCACTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLQFSSL*RRAALL
Trigger: CAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCTGCAGAGCCTGTGCTaGACATCGGAGAAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLQSLC*TSEKVV
Trigger: GACCACCTTCTCCGATGTGCAGCACAGGCTCTGCAG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTACTGTGTGTCCAAGTaGTCAGTGATGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCYCVSK*SVMVHR
Trigger: TCTGTGTACCATCACTGACCACTTGGACACACAGTA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTACTGTGTGTCCAAGTaGTCAGTGATGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLYCVSK*SVMVHR
Trigger: TCTGTGTACCATCACTGACCACTTGGACACACAGTA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCCTGTCACCTGCAGCTaGGGTGGCTGCTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWPVTCS*GGCFCR
Trigger: CCTACAGAAGCAGCCACCCCAGCTGCAGGTGACAGG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGACCAGCTGCATGCACTaGCTCCTCAGGGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWTSCMH*LLRVAA
Trigger: TGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGCCTCAGACTCCTGCTaGGTTGCCACCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAASDSC*VATSGP
Trigger: TGGCCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCAGGGAGGCGAGCACATaGCGAGCATATAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLREAST*RAYRTE
Trigger: CTCAGTCCTATATGCTCGCCATGTGCTCGCCTCCCT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCACTGGCACATGCCCTaGCCACTCGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLHWHMP*PLGQQG
Trigger: TCCCTGCTGGCCGAGTGGCCAGGGCATGTGCCAGTG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGCGGGTGGCCTTGTTTaGGTAGTTGATGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQAGGLV*VVDGQA
Trigger: AGCCTGGCCATCAACTACCCAAACAAGGCCACCCGC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATCGGCAGCCCAATCTTaGTGTGGGCTCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSAAQS*CGLQPS
Trigger: TGAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGGAACTGCTCCAGGGTaGCGGACTCTTCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKGTAPG*RTLHRG
Trigger: GCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTCCACTGGAGTTCTTaGGGGCCTCCAGCATATTCT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLHWSS*GPPAYS
Trigger: AGAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAATATCATTGATGAGTaGATGCCAAGGCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLNIIDE*MPRPSF
Trigger: AAAGGAGGGCCTTGGCATTCACTCATCAATGATATT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTCTTTTTGTACCAGTTaGTCCAGAGACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSFCTS*SRDSFR
Trigger: TCTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAAGACCAGCCCACACTaGGCACCAATGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRKTSPH*APMPPR
Trigger: CCGTGGTGGCATTGGTGCTCAGTGTGGGCTGGTCTT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGCCCAACCGTTCAGCTaGCTCCTGGCGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKAQPFS*LLAGAE
Trigger: CTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCACTGATGCACTGACTTaGGTGCCATGCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLTDALT*VPCTGK
Trigger: CTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGCCAGGGAATACACCTaGGAGAACTCCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKAREYT*ENSSVR
Trigger: CCTGACTGAGGAGTTCTCTCAGGTGTATTCCCTGGC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCTCTTCCATGGATCTaGAAGAGAGCAGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSLPWI*KRAAGV
Trigger: GACTCCGGCTGCTCTCTTTCAGATCCATGGAAGAGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCATTCTCCGGCCTATaGTCAAACCCTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSFSGL*SNPGSG
Trigger: ACCACTGCCAGGGTTTGATCATAGGCCGGAGAATGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGTCCTGGAGGCACGTaGGCACTGGCAGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSPGGT*ALAGAS
Trigger: AGATGCACCTGCCAGTGCTCACGTGCCTCCAGGACT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAGTCCTGGAGGCACGTaGGCACTGGCAGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSPGGT*ALAGAS
Trigger: AGATGCACCTGCCAGTGCTCACGTGCCTCCAGGACT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCCAGAAGACCCAGGGTaGGGTGGTAGGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLPEDPG*GGRFHS
Trigger: TGAATGAAACCTACCACCTCACCCTGGGTCTTCTGG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGSSMN*QAAKAM
Trigger: CATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGCCAGCAGGTACTCCTaGAGCAGGCCAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEASRYS*SRPSSW
Trigger: CCAGGAGCTTGGCCTGCTTCAGGAGTACCTGCTGGC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGCCAGCAGGTACTCCTaGAGCAGGCCAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRASRYS*SRPSSW
Trigger: CCAGGAGCTTGGCCTGCTTCAGGAGTACCTGCTGGC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCATTGCACCAGGAATGTaGACTTTATCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCIAPGM*TLSSKL
Trigger: CAGCTTTGAGGATAAAGTTCACATTCCTGGTGCAAT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGCAACTCCCGGAACTaGTCCAGGGTGACGGACTCT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSNSRN*SRVTDS
Trigger: AGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATTCCCTCAGAGCGTTaGGCTGTAGGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQIPSER*AVGFSS
Trigger: GGAGGAGAAGCCTACAGCGCAACGCTCTGAGGGAAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCCTTGGTCCAGGTATaGAATACCACAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSLVQV*NTTGCS
Trigger: GGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCCCACTCATTGTTACTaGTGTCAGAATGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCPTHCY*CQNERG
Trigger: TCCTCTTTCATTCTGACAGCAGTAACAATGAGTGGG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGTGAGTGGGCCAGCTTaGTTCCAATTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPVSGPA*FQFQLW
Trigger: CCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCAC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCAGTCCCCAACCAGCTaGATGCACTGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACQSPTS*MHWLLR
Trigger: CCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACAGTCCCCAACCAGCTaGATGCACTGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRQSPTS*MHWLLR
Trigger: CCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGTAGCTCGCTCTCTGTaGTGGAAATCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPVARSL*WKSASG
Trigger: CCCAGAAGCTGATTTCCAGCACAGAGAGCGAGCTAC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCACTCACTGGCACATaGCCTGGCCACTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSLTGT*PGHSAS
Trigger: GCTGGCCGAGTGGCCAGGGCATGTGCCAGTGAGTGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACAGCCAGGACTTCACTaGTGTTCATGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQQPGLH*CSWWPG
Trigger: ACCTGGCCACCATGAACACCAGTGAAGTCCTGGCTG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACCTTGTGTGGGTGAGTaGGCCAGCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPPCVGE*ASLLPI
Trigger: AATTGGAAGCAAGCTGGCCCACTCACCCACACAAGG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCTTCCCATCCTTGTGTaGGTGAGTGGGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLPILV*VSGPAC
Trigger: GCAAGCTGGCCCACTCACCCACACAAGGATGGGAAG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACCAGAGCGGCAAAGGTaGCGTTCACAGCTTGATCAA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPPERQR*RSQLDQ
Trigger: TTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACCTGTCACCTGCAGCTaGGGTGGCTGCTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRPVTCS*GGCFCR
Trigger: CCTACAGAAGCAGCCACCCCAGCTGCAGGTGACAGG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAAGGAGGCCTCCGGGTaGGTGTGGATGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLKEASG*VWMVVR
Trigger: CCTCACCACCATCCACACCCACCCGGAGGCCTCCTT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAAGGAGGCCTCCGGGTaGGTGTGGATGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRKEASG*VWMVVR
Trigger: CCTCACCACCATCCACACCCACCCGGAGGCCTCCTT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACTGGCTCCTCAGGGTaGCAGCATTGGTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMETGSSG*QHWCGP
Trigger: AGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAACCAGCTGCATGCACTaGCTCCTCAGGGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRTSCMH*LLRVAA
Trigger: TGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTGCTCCTCTGATGCCTaGAAGGACACTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKCSSDA*KDTVTG
Trigger: GCCAGTCACAGTGTCCTTCCAGGCATCAGAGGAGCA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATGGATGTTCAGCATCTaGAAGTCCTGGAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPWMFSI*KSWRHV
Trigger: CACGTGCCTCCAGGACTTCCAGATGCTGAACATCCA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACACCTGAAACATGAGTaGGAGGACGTGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPHLKHE*EDVLQI
Trigger: GATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACTGCCTCGGGACAATaGCTATCCATGCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTASGQ*LSMLVC
Trigger: GCAAACCAGCATGGATAGCCATTGTCCCGAGGCAGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACGGTCTGGAGGAAGGTaGCATGGGTCTCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPRSGGR*HGSLQN
Trigger: GTTTTGAAGAGACCCATGCCACCTTCCTCCAGACCG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAGCAGGCCAAGCTCCTaGGCACGGTTCTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSRPSS*ARFSVT
Trigger: TGTCACCGAGAACCGTGCCCAGGAGCTTGGCCTGCT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGAAGGTGGTCCTCGGTaGTTAAGGCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKEGGPR*LRPAGT
Trigger: AGTACCTGCTGGCCTTAACCACCGAGGACCACCTTC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGGCTCAGCTCCCCCTaGAGATTGGCTCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRWLSSP*RLAPLE
Trigger: CTCCAGTGGAGCCAATCTTCAGGGGGAGCTGAGCCA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGATAACACTTGGTTACTaGCTTGAGCTTATCCATCTC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLITLGY*LELIHL
Trigger: GAGATGGATAAGCTCAAGTCAGTAACCAAGTGTTAT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGCCGGAGGTACCCACTaGTGCTTAAGCCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESAGGTH*CLSLAR
Trigger: GCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTGGAGAGTTCAGGACTaGAGTCAGTTTTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLWRVQD*SQFCLG
Trigger: TCCCAGGCAAAACTGACTTCAGTCCTGAACTCTCCA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCCATCCTTGTGTGGGTaGGTGGGCCAGCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLPSLCG*VGQLAS
Trigger: GGAAGCAAGCTGGCCCACTCACCCACACAAGGATGG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGTTCTGAGCAGGCTCTaGCTGGGCAAAATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQVLSRL*LGKIKE
Trigger: CTCCTTGATTTTGCCCAGTCAGAGCCTGCTCAGAAC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGTTCTGAGCAGGCTCTaGCTGGGCAAAATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKVLSRL*LGKIKE
Trigger: CTCCTTGATTTTGCCCAGTCAGAGCCTGCTCAGAAC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGTGGCGTTCACAGCTTaGTCAATAGTGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPVAFTA*SIVEPA
Trigger: TGCTGGTTCCACTATTGATCAAGCTGTGAACGCCAC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGCCAGGGAATACACCTaGGAGAACTCCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWAREYT*ENSSVR
Trigger: CCTGACTGAGGAGTTCTCTCAGGTGTATTCCCTGGC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGGGTGTGGATGGTGGTaGGGGCTCTTCAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLGCGWW*GLFSCG
Trigger: TCCACAGCTGAAGAGCCCTCACCACCATCCACACCC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGGGTGTGGATGGTGGTaGGGGCTCTTCAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALGCGWW*GLFSCG
Trigger: TCCACAGCTGAAGAGCCCTCACCACCATCCACACCC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCTCTTCCATGGATCTaGAAGAGAGCAGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSLPWI*KRAAGV
Trigger: GACTCCGGCTGCTCTCTTTCAGATCCATGGAAGAGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTTGGAGATGACCACCTaGAACATGAGTGGGAGGACG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLEMTT*NMSGRT
Trigger: CGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGAGGTTGTGCTTGGCTaGAAGGACCTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKEVVLG*KDLHDC
Trigger: GCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCAAGCACCAGCAGAGTaGAGATGTTGGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLQAPAE*RCWCAS
Trigger: TGAAGCACACCAACATCTTCACTCTGCTGGTGCTTG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGGAGCCAGGTTTTACTaGAGCCGGTCCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRGARFY*SRSLCC
Trigger: GCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGACAGCTCCAAGGCTaGAGAGCAGGTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARQLQG*RAGGWS
Trigger: AGACCACCCACCTGCTCTTCAGCCTTGGAGCTGTCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCGCTTCGTCTTCGCTaGTGTTACTCGGAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPLRLR*CYSERS
Trigger: GGAACGCTCCGAGTAACAGCAGCGAAGACGAAGCGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGTGTGAGCGCGCACTaGCATCTGACTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGASVSAH*HLTASR
Trigger: CCTACTGGCAGTCAGATGGCAGTGCGCGCTCACACT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCACATTGCTGGGGATGTaGACATCACGAACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLTLLGM*TSRTSC
Trigger: GCAGGAAGTTCGTGATGTGCACATCCCCAGCAATGT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATTCAGGAGCAGGTTCTaGCTGACAGATGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPFRSRF*LTDAMD
Trigger: ATCCATGGCATCTGTCAGGCAGAACCTGCTCCTGAA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTTCCGCTTCTGCCCTTaGAGGCCGGAGGTACCCACT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALFRFCP*RPEVPT
Trigger: AGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGCTTTGTTCCGCTTCTaGCCTTGCAGGCCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRALFRF*PCRPEV
Trigger: TACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAGCTGCTGGATGAACTaGAGAGTCCTAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSCWMN*RVLRSR
Trigger: CCTGCTTCTTAGGACTCTGCAGTTCATCCAGCAGCT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAACTGAGAAGCAGCTCTaGAGGAGCTTCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQTEKQL*RSFSRR
Trigger: CCTTCTGCTGAAGCTCCTGCAGAGCTGCTTCTCAGT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTCTGTGCTCTTGAGCTaGAGGAAGCACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSVLLS*RKHQES
Trigger: GCTCTCCTGGTGCTTCCTGCAGCTCAAGAGCACAGA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTCCTTCAGGGTCACTaGACAGCTTCTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLLQGH*TASSTA
Trigger: AGCTGTTGAAGAAGCTGTGCAGTGACCCTGAAGGAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATGCAATACCACAGGCTaGTCCTGCTGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGACNTTG*SCCQVS
Trigger: GGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATCCTTGGTCCAGGTATaGAATACCACAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQSLVQV*NTTGCS
Trigger: GGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAGGACTCCTGTCACCTaGAGCTGGGGTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLRTPVT*SWGGCF
Trigger: GAAGCAGCCACCCCAGCTGCAGGTGACAGGAGTCCT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCAGGACTTCAAGTATaGTCTGCCCTTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSGLQV*SALGLS
Trigger: GGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACCAGGCCTCAAACATaGCATCCTGACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTRPQT*HPDTHP
Trigger: TGGATGAGTGTCAGGATGGCATGTTTGAGGCCTGGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCAAGGAAGCAAGTCTTaGAGAGGTCCATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLQGSKS*RGPCHC
Trigger: GCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGGCTGGATGAGCCTCTaGCGGTCACTGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLGWMSL*RSLMRM
Trigger: CATCCGCATCAGTGACCGGCAGAGGCTCATCCAGCC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTGCTCCCCATCCACCTaGTCTGTACTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACCSPST*SVLVRW
Trigger: CCACCTGACCAGTACAGAGCAGGTGGATGGGGAGCA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGGGTGGCAGCATTGGTaGGGGCCTGGGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFGWQHW*GPGGPA
Trigger: AGCTGGACCCCCAGGCCCGCACCAATGCTGCCACCC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCCCCAACCAGCTGCATaGACTGGCTCCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKPQPAA*TGSSGW
Trigger: CCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCAGTCCCCAACCAGCTaGATGCACTGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALQSPTS*MHWLLR
Trigger: CCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGGCCTGCATCTGCCTaGTCCTCTGATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARPASA*SSDAWK
Trigger: CTTCCAGGCATCAGAGGAGCAGGCAGATGCAGGCCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGCAATAAAGGCAAAGTaGTGGGAGTACTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLAIKAK*WEYWLS
Trigger: GCTGAGCCAGTACTCCCAGCACTTTGCCTTTATTGC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGACAGGACCCAGGTTaGTTCCACTGCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGQDPG*FHCLGT
Trigger: TGTCCCGAGGCAGTGGAAGCAACCTGGGTCCTGTCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGGACAGGACCCAGGTTaGTTCCACTGCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEGQDPG*FHCLGT
Trigger: TGTCCCGAGGCAGTGGAAGCAACCTGGGTCCTGTCC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCACAGCTTTGGCGCTCTaGTCCTCCAGCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACTALAL*SSSLRL
Trigger: GAGTCTGAGGCTGGAGGAGCAGAGCGCCAAAGCTGT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACTGCAGAGCCTGTGCTaGACATCGGAGAAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALQSLC*TSEKVV
Trigger: GACCACCTTCTCCGATGTGCAGCACAGGCTCTGCAG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCTGCAGAGCCTGTGCTaGACATCGGAGAAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACLQSLC*TSEKVV
Trigger: GACCACCTTCTCCGATGTGCAGCACAGGCTCTGCAG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCCTAAGCACAACATCTaGCTTCATCTTCAAACGTAT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLPKHNI*LHLQTY
Trigger: ATACGTTTGAAGATGAAGCCAGATGTTGTGCTTAGG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACGTTCAGCTGACTCCTaGCGGGTGCAGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARSADS*RVQRNF
Trigger: GAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATCATGGTGAAGAGCTaGCTTCTCCGGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQIMVKS*LLRVCR
Trigger: TCGACAGACCCGGAGAAGCCAGCTCTTCACCATGAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCAGCCAGGACTTCACTaGTGTTCATGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWQPGLH*CSWWPG
Trigger: ACCTGGCCACCATGAACACCAGTGAAGTCCTGGCTG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCCTTGTGTGGGTGAGTaGGCCAGCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKPCVGE*ASLLPI
Trigger: AATTGGAAGCAAGCTGGCCCACTCACCCACACAAGG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACTTCCCATCCTTGTGTaGGTGAGTGGGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRLPILV*VSGPAC
Trigger: GCAAGCTGGCCCACTCACCCACACAAGGATGGGAAG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCCAGAGCGGCAAAGGTaGCGTTCACAGCTTGATCAA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKPERQR*RSQLDQ
Trigger: TTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGGTAGTAGCTTTGGCTaGATCTCTAAGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLGSSFG*ISKAGL
Trigger: GAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGCCTCCGGGTGGGTGTaGATGGTGGTGAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKASGWV*MVVRAL
Trigger: AAGAGCCCTCACCACCATCCACACCCACCCGGAGGC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCGGATGGTCACCATTaGATGGGCTGTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTADGHH*MGCDAV
Trigger: CACAGCATCACAGCCCATCCAATGGTGACCATCCGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATTAAGACCTTTGCCCTaGTGGGCCTTCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLRPLP*WAFIRQ
Trigger: CTGTCTGATGAAGGCCCACCAGGGCAAAGGTCTTAA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACACCTGAAACATGAGTaGGAGGACGTGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQHLKHE*EDVLQI
Trigger: GATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAATAAAGGCAAAGTGCTaGGAGTACTGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPIKAKC*EYWLSW
Trigger: CCAGCTGAGCCAGTACTCCCAGCACTTTGCCTTTAT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGATGTCCTCACTCACTaGCACATGCCCTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACDVLTH*HMPWPL
Trigger: GAGTGGCCAGGGCATGTGCCAGTGAGTGAGGACATC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGATGTCCTCACTCACTaGCACATGCCCTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRDVLTH*HMPWPL
Trigger: GAGTGGCCAGGGCATGTGCCAGTGAGTGAGGACATC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATCTCAAACCCTGTCTaGAACCGCCCCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQISNPV*NRPRCP
Trigger: TGGACATCTGGGGCGGTTCCAGACAGGGTTTGAGAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGATCTCAAACCCTGTCTaGAACCGCCCCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKISNPV*NRPRCP
Trigger: TGGACATCTGGGGCGGTTCCAGACAGGGTTTGAGAT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGCAGGCCAAGCTCCTaGGCACGGTTCTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMESRPSS*ARFSVT
Trigger: TGTCACCGAGAACCGTGCCCAGGAGCTTGGCCTGCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp CTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGCTaGGTCACAGCAAAAGCCAGCCAAATGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEESSEAKGAS*VTAKASQMWPW
Trigger: CCAGGGCCACATTTGGCTGGCTTTTGCTGTGACCAAGCTTGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGATTTTTCAAACCGTTTaGAGTGTTCTTCTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLIFQTV*SVLLRE
Trigger: TTCACGCAGAAGAACACTTCAAACGGTTTGAAAAAT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGCCGGAGGTACCCACTaGTGCTTAAGCCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKAGGTH*CLSLAR
Trigger: GCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCAGATGGCAGCCCCATTaGGAAGAGTGTTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLRWQPH*EECFSL
Trigger: AAGTGAGAAACACTCTTCTCAATGGGGCTGCCATCT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATTACTGCTGTCAGAATaGAAGAGGAACTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLLLSE*KRNCSR
Trigger: TCGGCTGCAGTTCCTCTTTCATTCTGACAGCAGTAA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGTGACTGGCAGGGCTTaGTTTTCTGAGGTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQVTGRA*FSEVES
Trigger: TGACTCTACCTCAGAAAATCAAGCCCTGCCAGTCAC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACTGTGGGACCCGACTTaGTGGGAGGTAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMELWDPT*WEVTWL
Trigger: CAGCCATGTTACCTCCCATCAAGTCGGGTCCCACAG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTGTGGGACCCGACTTaGTGGGAGGTAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLWDPT*WEVTWL
Trigger: CAGCCATGTTACCTCCCATCAAGTCGGGTCCCACAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTTGGAGATGACCACCTaGAACATGAGTGGGAGGACG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTLEMTT*NMSGRT
Trigger: CGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACGGGGCATTGTTGAGTaGCCGAAGGATCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARGIVE*PKDLCH
Trigger: ATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCTGGGTCACAGGATTTaGTTCAGGAGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLGHRI*FRSGLV
Trigger: GACCAAGCCACTCCTGAATCAAATCCTGTGACCCAG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCAGGTTGTGCTTGGCTaGAAGGACCTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTQVVLG*KDLHDC
Trigger: GCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCCGCTTCGTCTTCGCTaGTGTTACTCGGAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLPLRLR*CYSERS
Trigger: GGAACGCTCCGAGTAACAGCAGCGAAGACGAAGCGG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAGTGTGAGCGCGCACTaGCATCTGACTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSVSAH*HLTASR
Trigger: CCTACTGGCAGTCAGATGGCAGTGCGCGCTCACACT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCACTGCAATGGACAGATaGCTAAGCACAACATCTGGC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLTAMDR*LSTTSG
Trigger: GCCAGATGTTGTGCTTAGGCATCTGTCCATTGCAGT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGCTTTGTTCCGCTTCTaGCCTTGCAGGCCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLALFRF*PCRPEV
Trigger: TACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGCTTTGTTCCGCTTCTaGCCTTGCAGGCCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEALFRF*PCRPEV
Trigger: TACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGAATGGAAAGTGAGTTaGAGAGACTGCTTGCGTTCG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPEWKVS*RDCLRS
Trigger: CGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATCTGTGCTCTTGAGCTaGAGGAAGCACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGASVLLS*RKHQES
Trigger: GCTCTCCTGGTGCTTCCTGCAGCTCAAGAGCACAGA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGGCGAGCTCTTTGGCTaGAGCATCTGTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACGELFG*SICALE
Trigger: CTCAAGAGCACAGATGCTGCAGCCAAAGAGCTCGCC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCTCCTTCAGGGTCACTaGACAGCTTCTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLLQGH*TASSTA
Trigger: AGCTGTTGAAGAAGCTGTGCAGTGACCCTGAAGGAG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTCTCCACATCCAACTTaGTCAGGCCTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSPHPT*SGLLQG
Trigger: ACCCTGAAGGAGGCCTGAGCAAGTTGGATGTGGAGA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGTGAGTGGGCCAGCTTaGTTCCAATTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWVSGPA*FQFQLW
Trigger: CCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCAC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGCTGTGGACACTTCTaGAACACAGGGGCCACTACT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSCGHF*NTGATT
Trigger: AGTAGTGGCCCCTGTGTTGCAGAAGTGTCCACAGCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGCTGGATGAGCCTCTaGCGGTCACTGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKGWMSL*RSLMRM
Trigger: CATCCGCATCAGTGACCGGCAGAGGCTCATCCAGCC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGCTCCCCATCCACCTaGTCTGTACTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRCSPST*SVLVRW
Trigger: CCACCTGACCAGTACAGAGCAGGTGGATGGGGAGCA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGGCCTGCATCTGCCTaGTCCTCTGATGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRRPASA*SSDAWK
Trigger: CTTCCAGGCATCAGAGGAGCAGGCAGATGCAGGCCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAATGAGTGGGAGGACGTaGTCCAGATCTATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAMSGRT*SRSIRG
Trigger: CCCCCTGATAGATCTGGAGCACGTCCTCCCACTCAT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGTTGGAATGGCAGCTaGTTGATGCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSWNGS*LMQWSV
Trigger: CACAGACCACTGCATCAAGCAGCTGCCATTCCAACT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGTGAAGATGTTGGTGTaGTTCAGTTGGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPVKMLV*FSWNGS
Trigger: GCTGCCATTCCAACTGAAGCACACCAACATCTTCAC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGCAATAAAGGCAAAGTaGTGGGAGTACTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKAIKAK*WEYWLS
Trigger: GCTGAGCCAGTACTCCCAGCACTTTGCCTTTATTGC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGACAATGGCTATCCATaGTGGTTTGCAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPDNGYP*WFAEGD
Trigger: GTCACCTTCTGCAAACCAGCATGGATAGCCATTGTC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAGCCGGTCCCTTTGCTaGACTTCTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSRSLC*TSSPAA
Trigger: AGCTGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGACAGCTTTGGCGCTCTaGTCCTCCAGCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALTALAL*SSSLRL
Trigger: GAGTCTGAGGCTGGAGGAGCAGAGCGCCAAAGCTGT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGGAGGGCAGCACTCTTaGTCCGGCGCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILGGQHS*SGAAWH
Trigger: ATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACAGTTCAGCTCCTTGTaGAGGAGGGCAGCACTCTTG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAQFSSL*RRAALL
Trigger: CAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTTAGATTCCCTCACTTaGACCTCCATTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLLDSLT*TSIPGS
Trigger: GGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGCCCAATCTTGATGTaGGCTCCAGCCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSPILM*APALTP
Trigger: GGGGGTGAGGGCTGGAGCCCACATCAAGATTGGGCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGAACTGATGATCTCATaGTGCACATGTTATTACAGT +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLELMIS*CTCYYS
Trigger: ACTGTAATAACATGTGCACCATGAGATCATCAGTTC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGAAGTCCGTAGATCCTaGAGAGAGGGACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALEVRRS*REGQRW
Trigger: CCACCGCTGTCCCTCTCTCCAGGATCTACGGACTTC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCATGGGAAAGCTGCTaGATGAACTGCAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSWESC*MNCRVL
Trigger: TAGGACTCTGCAGTTCATCCAGCAGCTTTCCCATGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCACTGGTGTTCATGGTaGCCAGGTCACTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWHWCSW*PGHSSQ
Trigger: CTGAGAAGAGTGACCTGGCCACCATGAACACCAGTG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAAAATAAGTTGCTCCTaGGCTAATAAAGACAGACAC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLKISCS*ANKDRH
Trigger: GTGTCTGTCTTTATTAGCCCAGGAGCAACTTATTTT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACTTCCCATCCTTGTGTaGGTGAGTGGGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMELPILV*VSGPAC
Trigger: GCAAGCTGGCCCACTCACCCACACAAGGATGGGAAG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGACAGAGCTTGTCCTCTaGCGTCTATCAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWTELVL*RLSSGW
Trigger: CCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGGTAGTAGCTTTGGCTaGATCTCTAAGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQGSSFG*ISKAGL
Trigger: GAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGCGGATGGTCACCATTaGATGGGCTGTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAADGHH*MGCDAV
Trigger: CACAGCATCACAGCCCATCCAATGGTGACCATCCGC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATGCTCCTCTGATGCCTaGAAGGACACTGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRCSSDA*KDTVTG
Trigger: GCCAGTCACAGTGTCCTTCCAGGCATCAGAGGAGCA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGCTGCTTGATGCAGTaGTCTGTGAAGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSCLMQ*SVKVAM
Trigger: CATTGCCACCTTCACAGACCACTGCATCAAGCAGCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGTGCTTCAGTTGGAATaGCAGCTGCTTGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQVLQLE*QLLDAV
Trigger: CACTGCATCAAGCAGCTGCCATTCCAACTGAAGCAC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGATTCAGGAGTGGCTTaGTCAGAGCGTGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKDSGVA*SERAGR
Trigger: CCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGCTCCGGCGCTGCTTaGCATAGCTCTGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRCSGAA*HSSAVA
Trigger: AGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACATATAGGACTGAGGTaGCCTCGTTCACACGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQHIGLR*PRSHGR
Trigger: TCTTCCGTGTGAACGAGGCCACCTCAGTCCTATATG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGATGTCCTCACTCACTaGCACATGCCCTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEDVLTH*HMPWPL
Trigger: GAGTGGCCAGGGCATGTGCCAGTGAGTGAGGACATC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGGATCTTCTCCCACTaGTGCTTTTCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKRIFSH*CFSSSC
Trigger: GCAGCTGGAAGAAAAGCACCAGTGGGAGAAGATCCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGGCAGCCAAGGCCATaGTGCCCAGCATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMERQPRP*CPACSL
Trigger: GAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCACTACTGCTGGACATaGCTAGTTCATCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLHYCWT*LVHHSL
Trigger: AAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGATACAGAGTATCTCCTaGAAGCTCAAAATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLIQSIS*KLKIFP
Trigger: TGGAAAGATTTTGAGCTTCCAGGAGATACTCTGTAT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCAGTAGTAAGTGGATaGCTTTCAGGCGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSVVSG*LSGADD
Trigger: GTCATCAGCGCCTGAAAGCCATCCACTTACTACTGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCAGTAGTAAGTGGATaGCTTTCAGGCGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSVVSG*LSGADD
Trigger: GTCATCAGCGCCTGAAAGCCATCCACTTACTACTGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGCAGGCCAAGCTCCTaGGCACGGTTCTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSRPSS*ARFSVT
Trigger: TGTCACCGAGAACCGTGCCCAGGAGCTTGGCCTGCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp ACTGGGCAGGAAGTGGTGCCAGAAGGCATAGCACCTTaGCACAAGATGCTCCCACACCTGCAGGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TGQEVVPEGIAP*HKMLPHLQVQV
Trigger: AACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTCTGGCACCACTTCCTGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp GCGTGCAACGGGAGACTTCTCTGGGGTTTAGGCCGCTaGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: ACNGRLLWGLGR*QSVGALAKSKR
Trigger: CCTTTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAGTCTCCCGTTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp GGCACATGTTTCCACGACCCCTTATGCCTGCCAGTTTaGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTCFHDPLCLPV*SPSRQSCLLRV
Trigger: GACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTCGTGGAAACATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGGACATAGAGCTGACTaGTGTTGGCATTTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPGHRAD*CWHFLA
Trigger: TGCTAGAAAATGCCAACATCAGTCAGCTCTATGTCC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGATTTCTTTACTCTCTaGAAGCCAACAGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLDFFTL*KPTALR
Trigger: TCTGAGGGCTGTTGGCTTTCAGAGAGTAAAGAAATC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGAGTGAATGGAAAGTaGGTTGCAGAGACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKRVNGK*VAETAC
Trigger: GCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCAGCATCTGTGCTCTTaGGCTGCAGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKQHLCS*AAGSTR
Trigger: CCTGGTGCTTCCTGCAGCTCAAGAGCACAGATGCTG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAACAGCATCTGTGCTCTTaGGCTGCAGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKQHLCS*AAGSTR
Trigger: CCTGGTGCTTCCTGCAGCTCAAGAGCACAGATGCTG...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCAAACATGCCATCCTaGCACTCATCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSNMPS*HSSIHS
Trigger: AGAGTGGATGGATGAGTGTCAGGATGGCATGTTTGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCTGGAAGGACACTGTaGCTGGCAGGGCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPGRTL*LAGLDF
Trigger: AAAATCAAGCCCTGCCAGTCACAGTGTCCTTCCAGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGATCTGCCTGCTCCTCTaGTGCCTGGAAGGACACTGT +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLICLLL*CLEGHC
Trigger: ACAGTGTCCTTCCAGGCATCAGAGGAGCAGGCAGAT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATCTTCTACCAGTACCTaGGCTGACACTTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQSSTST*ADTSGC
Trigger: ACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCTTCTACCAGTACCTaGGCTGACACTTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSSTST*ADTSGC
Trigger: ACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCAAGCACCAGCAGAGTaGAGATGTTGGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTQAPAE*RCWCAS
Trigger: TGAAGCACACCAACATCTTCACTCTGCTGGTGCTTG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCATTGAGGGCATCATaGGCCATCAAGAAGCATATT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPALRAS*AIKKHI
Trigger: AATATGCTTCTTGATGGCTCATGATGCCCTCAATGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATGTGCAGAGGGGCATTaGGGGCATCATGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRCAEGH*GHHEPS
Trigger: TGATGGCTCATGATGCCCTCAATGCCCCTCTGCACA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKGSSMN*QAAKAM
Trigger: CATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAACCGCTTCGTCTTCGCTaGTGTTACTCGGAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKPLRLR*CYSERS
Trigger: GGAACGCTCCGAGTAACAGCAGCGAAGACGAAGCGG...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGCAACTCCCGGAACTaGTCCAGGGTGACGGACTCT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSNSRN*SRVTDS
Trigger: AGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAACTGCAATGGACAGATaGCTAAGCACAACATCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQTAMDR*LSTTSG
Trigger: GCCAGATGTTGTGCTTAGGCATCTGTCCATTGCAGT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGTCAGTGGCAGCCACTaGAATGGACAGATGCCTAAG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACVSGSH*NGQMPK
Trigger: CTTAGGCATCTGTCCATTGCAGTGGCTGCCACTGAC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGACATCACGAACTTCCTaGAGGTCACTGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWTSRTS*RSLALL
Trigger: AAGGAGTGCCAGTGACCTGCAGGAAGTTCGTGATGT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTTCAGGAGCAGGTTCTaGCTGACAGATGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWFRSRF*LTDAMD
Trigger: ATCCATGGCATCTGTCAGGCAGAACCTGCTCCTGAA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTGCTTTTTACGAACTaGCTCAGTTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLLFTN*LSSWSF
Trigger: GAAACTCCAGGAACTGAGGCAGTTCGTAAAAAGCAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCTGACTCCTGGCGGGTaGAGAGGAACTTCACCATCA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLLTPGG*RGTSPS
Trigger: TGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAAGCCACTTTCCTTTTaGTGCATCAGGTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPKPLSF*CIRSWE
Trigger: TTCCCATGACCTGATGCAGCAAAAGGAAAGTGGCTT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGCTTGTGGGTCACCCTaGAGCACTGAGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKACGSP*STEKQL
Trigger: GAGCTGCTTCTCAGTGCTGCAGGGTGACCCACAAGC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATTCCCTCAGAGCGTTaGGCTGTAGGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALIPSER*AVGFSS
Trigger: GGAGGAGAAGCCTACAGCGCAACGCTCTGAGGGAAT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCATATAAGTCTGGAGTaGGATACACCAGAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKHISLE*DTPERQ
Trigger: TTGCCGCTCTGGTGTATCGCACTCCAGACTTATATG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACATATAAGTCTGGAGTaGGATACACCAGAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQHISLE*DTPERQ
Trigger: TTGCCGCTCTGGTGTATCGCACTCCAGACTTATATG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGACTTCAAGTATGCTCTaGCCTTGGGCTTTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKTSSML*PWAFRK
Trigger: TTTGCGGAAAGCCCAAGGGCAGAGCATACTTGAAGT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTCAGGACTTCAAGTATaGTCTGCCCTTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWSGLQV*SALGLS
Trigger: GGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAATGAGTGGGAGGACGTaGTCCAGATCTATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEMSGRT*SRSIRG
Trigger: CCCCCTGATAGATCTGGAGCACGTCCTCCCACTCAT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGAGTGGGAGGACGTaGTCCAGATCTATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALMSGRT*SRSIRG
Trigger: CCCCCTGATAGATCTGGAGCACGTCCTCCCACTCAT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGCCGGTCCCTTTGCTaGACTTCTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSRSLC*TSSPAA
Trigger: AGCTGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGAGGGCAGCACTCTTaGTCCGGCGCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGGQHS*SGAAWH
Trigger: ATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACAGTTCAGCTCCTTGTaGAGGAGGGCAGCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEQFSSL*RRAALL
Trigger: CAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTCACTCACTGGCACATaGCCTGGCCACTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESLTGT*PGHSAS
Trigger: GCTGGCCGAGTGGCCAGGGCATGTGCCAGTGAGTGA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTCCTCAGTGTTGCATTaGACCTCCATTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWSSVLH*TSIPGS
Trigger: GGAACCAGGAATGGAGGTGCAATGCAACACTGAGGA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000069395.7
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGCTGAAAGTCACTACTaGTGGACATGGCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLAESHY*WTWLVH
Trigger: ATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGCTGAAAGTCACTACTaGTGGACATGGCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPAESHY*WTWLVH
Trigger: ATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCTGTGGCTGCAGCATTaGACAATCCTCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLWLQH*TILSSK
Trigger: CTTACTACTGAGGATTGTGCAATGCTGCAGCCACAG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATAGCAGCAATGTTCTaGAGAGCCTGTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQIAAMF*RACAAH
Trigger: ATGTGCAGCACAGGCTCTGCAGAACATTGCTGCTAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGTGGCAAACAGGTTGTaGTTGGCTGAAAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTVANRL*LAERTF
Trigger: GAAGGTCCTTTCAGCCAAGCACAACCTGTTTGCCAC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCCCTCAGCATCAAACTaGGCAAAGGCCTCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALPSASN*AKASSN
Trigger: GTTCGAGGAGGCCTTTGCCCAGTTTGATGCTGAGGG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACCATCTCTGGGCTTCTaGCTAGATCTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAPSLGF*LDLQGF
Trigger: AAAGCCCTGGAGATCTAGCCAGAAGCCCAGAGATGG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCATCTCTGGGCTTCTaGCTAGATCTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPSLGF*LDLQGF
Trigger: AAAGCCCTGGAGATCTAGCCAGAAGCCCAGAGATGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATGTAGCTCTGGTCAGTaGCAGCCACTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRCSSGQ*QPLQWT
Trigger: TGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATGTAGCTCTGGTCAGTaGCAGCCACTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGACSSGQ*QPLQWT
Trigger: TGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTTGTGCAGCACTGTCTaGACAAAGGCAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLCSTV*TKAGFV
Trigger: GACAAATCCTGCCTTTGTCCAGACAGTGCTGCACAA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAACCATCCCTTGTCCATaGCTCCACAAGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPTIPCP*LHKKIF
Trigger: GAAAATCTTCTTGTGGAGCCATGGACAAGGGATGGT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCTGATCTGTGTAACTTaGAAGGCAGAGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLLICVT*KAESLP
Trigger: AGGAAGTGACTCTGCCTTCCAAGTTACACAGATCAG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCGTTCAGCTGACTCCTaGCGGGTGCAGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRSADS*RVQRNF
Trigger: GAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAATCATGGTGAAGAGCTaGCTTCTCCGGGTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAIMVKS*LLRVCR
Trigger: TCGACAGACCCGGAGAAGCCAGCTCTTCACCATGAT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACCTTGTGTGGGTGAGTaGGCCAGCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRPCVGE*ASLLPI
Trigger: AATTGGAAGCAAGCTGGCCCACTCACCCACACAAGG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAAAATCAAGGAGAAAATaGCGGCAGGGATCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQKSRRK*RQGSSG
Trigger: CCCTGATGATCCCTGCCGCCATTTTCTCCTTGATTT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGAGAAGGCAAGATCACTaGGTTCCCAGCCCATATCCA +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWRRQDH*VPSPYP
Trigger: TGGATATGGGCTGGGAACCCAGTGATCTTGCCTTCT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTGTGATGCTGTGAGTTaGCAAATGGCCATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLCDAVS*QMAIGV
Trigger: TACTCCTATGGCCATTTGCCAACTCACAGCATCACA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTACTGGCTCCTCAGGGTaGCAGCATTGGTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFTGSSG*QHWCGP
Trigger: AGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGACCTTTGCCCTGGTaGGCCTTCATCAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRRPLPW*AFIRQS
Trigger: GGACTGTCTGATGAAGGCCCACCAGGGCAAAGGTCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGACCTTTGCCCTGGTaGGCCTTCATCAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMERPLPW*AFIRQS
Trigger: GGACTGTCTGATGAAGGCCCACCAGGGCAAAGGTCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGACCTTTGCCCTGGTaGGCCTTCATCAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRPLPW*AFIRQS
Trigger: GGACTGTCTGATGAAGGCCCACCAGGGCAAAGGTCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTCTGAAACCTGGGTCTaGCATGAAGGGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSETWV*HEGSFT
Trigger: AGTGAAGGACCCTTCATGCCAGACCCAGGTTTCAGA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGAGGCACGTGAGCACTaGCAGGTGCATCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALEAREH*QVHLKP
Trigger: AGGTTTCAGATGCACCTGCCAGTGCTCACGTGCCTC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGTGCTTCAGTTGGAATaGCAGCTGCTTGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTVLQLE*QLLDAV
Trigger: CACTGCATCAAGCAGCTGCCATTCCAACTGAAGCAC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTTGGTGTGCTTCAGTTaGAATGGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLVCFS*NGSCLM
Trigger: CATCAAGCAGCTGCCATTCCAACTGAAGCACACCAA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCATTATGGGGTTCATTaGCATTATCCATATAAACAC +
Preference number: 4 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCHYGVH*HYPYKH
Trigger: GTGTTTATATGGATAATGCCAATGAACCCCATAATG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCATTATGGGGTTCATTaGCATTATCCATATAAACAC +
Preference number: 4 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLHYGVH*HYPYKH
Trigger: GTGTTTATATGGATAATGCCAATGAACCCCATAATG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCACTGCCTCGGGACAATaGCTATCCATGCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACTASGQ*LSMLVC
Trigger: GCAAACCAGCATGGATAGCCATTGTCCCGAGGCAGT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGCCTCAGACTCCTGCTaGGTTGCCACCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFASDSC*VATSGP
Trigger: TGGCCCAGAGGTGGCAACCCAGCAGGAGTCTGAGGC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGCTCCGGCGCTGCTTaGCATAGCTCTGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKCSGAA*HSSAVA
Trigger: AGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGGCAGCCAAGGCCATaGTGCCCAGCATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRQPRP*CPACSL
Trigger: GAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAATCTCAAACCCTGTCTaGAACCGCCCCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRISNPV*NRPRCP
Trigger: TGGACATCTGGGGCGGTTCCAGACAGGGTTTGAGAT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
3UTR CAA 72 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTaGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSP*PTPRRVFRGQR
Trigger: CCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTCGGCAGCCCAATCTTaGTGTGGGCTCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESAAQS*CGLQPS
Trigger: TGAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCTCCACTGGAGTTCTTaGGGGCCTCCAGCATATTCT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESLHWSS*GPPAYS
Trigger: AGAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTCCACTGGAGTTCTTaGGGGCCTCCAGCATATTCT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLHWSS*GPPAYS
Trigger: AGAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCTTTTTGTACCAGTTaGTCCAGAGACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSFCTS*SRDSFR
Trigger: TCTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTTAACATCACAAGCCTaGAGAGTCAACTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTLTSQA*RVNWRG
Trigger: GCCTCTCCAGTTGACTCTTCAGGCTTGTGATGTTAA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGCAGGGTGGCCCCATaGATATTCTCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSRVAP*IFSVSL
Trigger: AAGGGACACAGAGAATATTCATGGGGCCACCCTGCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGTCACCCTGCAGCACTaGGAAGCAGCTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEVTLQH*EAALQE
Trigger: CTCCTGCAGAGCTGCTTCTCAGTGCTGCAGGGTGAC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGGAAGATGACCAGTTaGCGAGCTGCCATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARKMTS*RAAMEN
Trigger: GTTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAACTGATGCACTGACTTaGGTGCCATGCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRTDALT*VPCTGK
Trigger: CTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACTGATGCACTGACTTaGGTGCCATGCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMETDALT*VPCTGK
Trigger: CTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGACAAATCTGATGCCTaGAGACAGGTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKDKSDA*RQVSTM
Trigger: CATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTTCTGAGCAGGCTCTaGCTGGGCAAAATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRVLSRL*LGKIKE
Trigger: CTCCTTGATTTTGCCCAGTCAGAGCCTGCTCAGAAC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTTCTGTAGGAGATGCTaGACCCTGGAAATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKFCRRC*TLEMFF
Trigger: GAAGAACATTTCCAGGGTTCAGCATCTCCTACAGAA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAGGAGATCTGGTAACTaGATGTCAACAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPRRSGN*MSTKKA
Trigger: TGCCTTCTTTGTTGACATTCAGTTACCAGATCTCCT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCACTGTCATGGACACTaGTGTTTTCTTGGGACATGT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKHCHGH*CFLGTC
Trigger: ACATGTCCCAAGAAAACATCAGTGTCCATGACAGTG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCATTCTCCGGCCTATaGTCAAACCCTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSFSGL*SNPGSG
Trigger: ACCACTGCCAGGGTTTGATCATAGGCCGGAGAATGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCATTGGATGGGCTGTaGTGCTGTGAGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPLDGL*CCELAN
Trigger: ATTTGCCAACTCACAGCATCACAGCCCATCCAATGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCCTGGAAGGACACTGTaGCTGGCAGGGCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESPGRTL*LAGLDF
Trigger: AAAATCAAGCCCTGCCAGTCACAGTGTCCTTCCAGG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGATCTGCCTGCTCCTCTaGTGCCTGGAAGGACACTGT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKICLLL*CLEGHC
Trigger: ACAGTGTCCTTCCAGGCATCAGAGGAGCAGGCAGAT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATACCAGTACCTGAGCTaGCACTTCTGGATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAYQYLS*HFWMFS
Trigger: GCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTTGGAGATGACCACCTaGAACATGAGTGGGAGGACG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESLEMTT*NMSGRT
Trigger: CGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCTACTTCTGCTGGCTaGAGACGGATAATTAACTGG +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSTSAG*RRIINW
Trigger: CCAGTTAATTATCCGTCTTCAGCCAGCAGAAGTAGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGCATTGAGGGCATCATaGGCCATCAAGAAGCATATT +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQALRAS*AIKKHI
Trigger: AATATGCTTCTTGATGGCTCATGATGCCCTCAATGC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGTGCAGAGGGGCATTaGGGGCATCATGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKCAEGH*GHHEPS
Trigger: TGATGGCTCATGATGCCCTCAATGCCCCTCTGCACA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTGGGTCACAGGATTTaGTTCAGGAGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLGHRI*FRSGLV
Trigger: GACCAAGCCACTCCTGAATCAAATCCTGTGACCCAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILGSSMN*QAAKAM
Trigger: CATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAGGCCATACTCCATGTaGGTAAAGAGCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESRPYSM*VKSCHR
Trigger: CCTGTGGCAGCTCTTTACTCACATGGAGTATGGCCT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATCCTCAGTGTTGCACTaGGGGTCAAATTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQSSVLH*GSNLIE
Trigger: CTCAATCAAATTTGACCCTCAGTGCAACACTGAGGA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCATTGATGAGTGAATaGCAAGGCCCTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKSLMSE*QGPPLT
Trigger: AGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTTCAGGAGCAGGTTCTaGCTGACAGATGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACFRSRF*LTDAMD
Trigger: ATCCATGGCATCTGTCAGGCAGAACCTGCTCCTGAA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACTGCTTTTTACGAACTaGCTCAGTTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQLLFTN*LSSWSF
Trigger: GAAACTCCAGGAACTGAGGCAGTTCGTAAAAAGCAG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCTGACTCCTGGCGGGTaGAGAGGAACTTCACCATCA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKLTPGG*RGTSPS
Trigger: TGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTTCCGCTTCTGCCCTTaGAGGCCGGAGGTACCCACT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFFRFCP*RPEVPT
Trigger: AGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGGGACACGTCTAAAGTaGAGAAGTCTAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTGTRLK*RSLAGR
Trigger: TCTTCCTGCTAGACTTCTGCACTTTAGACGTGTCCC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGGGACACGTCTAAAGTaGAGAAGTCTAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWGTRLK*RSLAGR
Trigger: TCTTCCTGCTAGACTTCTGCACTTTAGACGTGTCCC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCTCCACATCCAACTTaGTCAGGCCTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSPHPT*SGLLQG
Trigger: ACCCTGAAGGAGGCCTGAGCAAGTTGGATGTGGAGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCGGGAGACAAGGAGTTaGAAGTCCAAACCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRETRS*KSKPQD
Trigger: GTCTTGGGGTTTGGACTTGCAACTCCTTGTCTCCCG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGCTGTGGACACTTCTaGAACACAGGGGCCACTACT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSCGHF*NTGATT
Trigger: AGTAGTGGCCCCTGTGTTGCAGAAGTGTCCACAGCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACAAGGAAGCAAGTCTTaGAGAGGTCCATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRQGSKS*RGPCHC
Trigger: GCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGCCGGTCCCTTTGCTaGACTTCTTCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSRSLC*TSSPAA
Trigger: AGCTGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGTAGCTCGCTCTCTGTaGTGGAAATCAGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLVARSL*WKSASG
Trigger: CCCAGAAGCTGATTTCCAGCACAGAGAGCGAGCTAC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGCTGAAAGTCACTACTaGTGGACATGGCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKAESHY*WTWLVH
Trigger: ATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATCTTTCCACTTCTGTTaGGACCCGCTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSFHFC*DPLKLC
Trigger: GCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATCTTTCCACTTCTGTTaGGACCCGCTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGASFHFC*DPLKLC
Trigger: GCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGAGGTCACTGTGGCTaGAGCATTGCACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARGHCG*SIAQSS
Trigger: TGAGGATTGTGCAATGCTGCAGCCACAGTGACCTCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCATAGCAGCAATGTTCTaGAGAGCCTGTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTIAAMF*RACAAH
Trigger: ATGTGCAGCACAGGCTCTGCAGAACATTGCTGCTAT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTTAGATTCCCTCACTTaGACCTCCATTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLDSLT*TSIPGS
Trigger: GGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTAGCCCAATCTTGATGTaGGCTCCAGCCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSPILM*APALTP
Trigger: GGGGGTGAGGGCTGGAGCCCACATCAAGATTGGGCT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAACCCTCAGCATCAAACTaGGCAAAGGCCTCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKPSASN*AKASSN
Trigger: GTTCGAGGAGGCCTTTGCCCAGTTTGATGCTGAGGG...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGCTGATCTGTGTAACTTaGAAGGCAGAGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKLICVT*KAESLP
Trigger: AGGAAGTGACTCTGCCTTCCAAGTTACACAGATCAG...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTGCTGCATCAGGTCATaGGAAAGCTGCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACCCIRS*ESCWMN
Trigger: GTTCATCCAGCAGCTTTCCCATGACCTGATGCAGCA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCACTGGTGTTCATGGTaGCCAGGTCACTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLHWCSW*PGHSSQ
Trigger: CTGAGAAGAGTGACCTGGCCACCATGAACACCAGTG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAACCATGGCGAGCTCTTTaGCTGCAGCATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKPWRAL*LQHLCS
Trigger: AGAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGG...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATATAAGTCCCAACTTTaGTGTCATAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPYKSQL*CHSVSS
Trigger: GGAAGACACGCTATGACACCAAAGTTGGGACTTATA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCCAGAGCGGCAAAGGTaGCGTTCACAGCTTGATCAA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALPERQR*RSQLDQ
Trigger: TTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACAGAGCTTGTCCTCTaGCGTCTATCAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMETELVL*RLSSGW
Trigger: CCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGAAAAGTATATACGGTaGGTGGAAGCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTEKYIR*VEAVRL
Trigger: CAGCCTCACTGCTTCCACCCACCGTATATACTTTTC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGAAGGCAAGATCACTaGGTTCCCAGCCCATATCCA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARRQDH*VPSPYP
Trigger: TGGATATGGGCTGGGAACCCAGTGATCTTGCCTTCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATCTTCTTCACTCCACTaGCTAATCACACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQSSSLH*LITLSW
Trigger: CCATGACAGTGTGATTAGCCAGTGGAGTGAAGAAGA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGACTCTGAGTTCTGCTTaGCATCAGCGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKTLSSA*HQRVHL
Trigger: AAGATGAACTCGCTGATGCCAAGCAGAACTCAGAGT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGAGGCACGTGAGCACTaGCAGGTGCATCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKEAREH*QVHLKP
Trigger: AGGTTTCAGATGCACCTGCCAGTGCTCACGTGCCTC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCACCTGAAACATGAGTaGGAGGACGTGCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALHLKHE*EDVLQI
Trigger: GATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAGACGGATAATTAACTaGCCCAGAAGACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACRRIIN*PRRPRV
Trigger: CACCCTGGGTCTTCTGGGCCAGTTAATTATCCGTCT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAGACGGATAATTAACTaGCCCAGAAGACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGARRIIN*PRRPRV
Trigger: CACCCTGGGTCTTCTGGGCCAGTTAATTATCCGTCT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCATAAAGGCAAAGTGCTaGGAGTACTGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACIKAKC*EYWLSW
Trigger: CCAGCTGAGCCAGTACTCCCAGCACTTTGCCTTTAT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAATAAAGGCAAAGTGCTaGGAGTACTGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRIKAKC*EYWLSW
Trigger: CCAGCTGAGCCAGTACTCCCAGCACTTTGCCTTTAT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCGGTCTGGAGGAAGGTaGCATGGGTCTCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRSGGR*HGSLQN
Trigger: GTTTTGAAGAGACCCATGCCACCTTCCTCCAGACCG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATCCAGTTCTTCTTCTTaGTCTCCTCGTTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQSSSSS*SPRSSS
Trigger: GCTAGATGAACGAGGAGACCAAGAAGAAGAACTGGA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACTGGAAATCAGCTTCTaGGTCACAGGATTTGATTCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPLEISF*VTGFDS
Trigger: TGAATCAAATCCTGTGACCCAGAAGCTGATTTCCAG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGCTCGCTCTCTGTGCTaGAAATCAGCTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLARSLC*KSASGS
Trigger: TGACCCAGAAGCTGATTTCCAGCACAGAGAGCGAGC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGCTCGCTCTCTGTGCTaGAAATCAGCTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRARSLC*KSASGS
Trigger: TGACCCAGAAGCTGATTTCCAGCACAGAGAGCGAGC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGGGAGGCGAGCACATaGCGAGCATATAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKREAST*RAYRTE
Trigger: CTCAGTCCTATATGCTCGCCATGTGCTCGCCTCCCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGCACTGGCACATGCCCTaGCCACTCGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKHWHMP*PLGQQG
Trigger: TCCCTGCTGGCCGAGTGGCCAGGGCATGTGCCAGTG...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACAGCATTGTCTGCTGTaGCAAACAGGTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRQHCLL*QTGCAW
Trigger: CCAAGCACAACCTGTTTGCCACAGCAGACAATGCTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGGCTGAAGAGCAGGTaGGTGGTCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRLKSR*VVFQPS
Trigger: AGATGGCTGGAAGACCACCCACCTGCTCTTCAGCCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTGTCCAAGTGGTCAGTaGTGGTACACAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLCPSGQ*WYTESS
Trigger: TGAGCTCTCTGTGTACCATCACTGACCACTTGGACA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGGAGCAGGTTCTGCCTaGCAGATGCCATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILGAGSA*QMPWMR
Trigger: TCTCATCCATGGCATCTGTCAGGCAGAACCTGCTCC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTAACATCACAAGCCTaGAGAGTCAACTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALTSQA*RVNWRG
Trigger: GCCTCTCCAGTTGACTCTTCAGGCTTGTGATGTTAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGAGTGAATGGAAAGTaGGTTGCAGAGACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRRVNGK*VAETAC
Trigger: GCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTACTGCTGTCAGAATaGAAGAGGAACTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALLLSE*KRNCSR
Trigger: TCGGCTGCAGTTCCTCTTTCATTCTGACAGCAGTAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTGGAGAGTTCAGGACTaGAGTCAGTTTTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLWRVQD*SQFCLG
Trigger: TCCCAGGCAAAACTGACTTCAGTCCTGAACTCTCCA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAACTCTGGACAAATCTaGTGCCTGAAGACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTNSGQI*CLKTGF
Trigger: GAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTTCTGTAGGAGATGCTaGACCCTGGAAATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTFCRRC*TLEMFF
Trigger: GAAGAACATTTCCAGGGTTCAGCATCTCCTACAGAA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCCCATATCCAAAAGATaGAGCAGGGCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALPISKR*SRAVWT
Trigger: TGTCCAGACAGCCCTGCTTCATCTTTTGGATATGGG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCTTGGGACATGTTCATaGGGAGATCTGGTAACTGAA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTLGTCS*GDLVTE
Trigger: TTCAGTTACCAGATCTCCTCATGAACATGTCCCAAG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCACTGTCATGGACACTaGTGTTTTCTTGGGACATGT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTHCHGH*CFLGTC
Trigger: ACATGTCCCAAGAAAACATCAGTGTCCATGACAGTG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTCAAACATGCCATCCTaGCACTCATCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSNMPS*HSSIHS
Trigger: AGAGTGGATGGATGAGTGTCAGGATGGCATGTTTGA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCCATTGGATGGGCTGTaGTGCTGTGAGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESPLDGL*CCELAN
Trigger: ATTTGCCAACTCACAGCATCACAGCCCATCCAATGG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGTGACTGGCAGGGCTTaGTTTTCTGAGGTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEVTGRA*FSEVES
Trigger: TGACTCTACCTCAGAAAATCAAGCCCTGCCAGTCAC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTGACTGGCAGGGCTTaGTTTTCTGAGGTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRVTGRA*FSEVES
Trigger: TGACTCTACCTCAGAAAATCAAGCCCTGCCAGTCAC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCCAGAAGACCCAGGGTaGGGTGGTAGGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKPEDPG*GGRFHS
Trigger: TGAATGAAACCTACCACCTCACCCTGGGTCTTCTGG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTACGGGGCATTGTTGAGTaGCCGAAGGATCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRGIVE*PKDLCH
Trigger: ATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCG...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACAAGCACCAGCAGAGTaGAGATGTTGGTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEQAPAE*RCWCAS
Trigger: TGAAGCACACCAACATCTTCACTCTGCTGGTGCTTG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGGAGCCAGGTTTTACTaGAGCCGGTCCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFGARFY*SRSLCC
Trigger: GCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAACTGGGTCACAGGATTTaGTTCAGGAGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKLGHRI*FRSGLV
Trigger: GACCAAGCCACTCCTGAATCAAATCCTGTGACCCAG...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGGCCATACTCCATGTaGGTAAAGAGCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKRPYSM*VKSCHR
Trigger: CCTGTGGCAGCTCTTTACTCACATGGAGTATGGCCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAGCAACTCCCGGAACTaGTCCAGGGTGACGGACTCT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESNSRN*SRVTDS
Trigger: AGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTCATTGATGAGTGAATaGCAAGGCCCTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWSLMSE*QGPPLT
Trigger: AGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAACTGCAATGGACAGATaGCTAAGCACAACATCTGGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGATAMDR*LSTTSG
Trigger: GCCAGATGTTGTGCTTAGGCATCTGTCCATTGCAGT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGCTGCTGGATGAACTaGAGAGTCCTAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSCWMN*RVLRSR
Trigger: CCTGCTTCTTAGGACTCTGCAGTTCATCCAGCAGCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGACTGAGAAGCAGCTCTaGAGGAGCTTCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKTEKQL*RSFSRR
Trigger: CCTTCTGCTGAAGCTCCTGCAGAGCTGCTTCTCAGT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGGCGAGCTCTTTGGCTaGAGCATCTGTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILGELFG*SICALE
Trigger: CTCAAGAGCACAGATGCTGCAGCCAAAGAGCTCGCC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAATCACTCTCATGCTTaGCAGAAACTGCCCCACATA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTNHSHA*QKLPHI
Trigger: TATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGACCAGTTGACGAGCTaGCATGGAAAACACCGAATT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACDQLTS*HGKHRI
Trigger: AATTCGGTGTTTTCCATGGCAGCTCGTCAACTGGTC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTGCAATACCACAGGCTaGTCCTGCTGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMECNTTG*SCCQVS
Trigger: GGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTCCTTGGTCCAGGTATaGAATACCACAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSLVQV*NTTGCS
Trigger: GGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTCAGGACTTCAAGTATaGTCTGCCCTTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSGLQV*SALGLS
Trigger: GGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAACCAGGCCTCAAACATaGCATCCTGACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRTRPQT*HPDTHP
Trigger: TGGATGAGTGTCAGGATGGCATGTTTGAGGCCTGGT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGACATCGGTATCGATaGCAGGGGGCAATCTCATCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRRHRYR*QGAISS
Trigger: TGATGAGATTGCCCCCTGGCATCGATACCGATGTCT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTGCTCCCCATCCACCTaGTCTGTACTGGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFCSPST*SVLVRW
Trigger: CCACCTGACCAGTACAGAGCAGGTGGATGGGGAGCA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAGTTGGAATGGCAGCTaGTTGATGCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSWNGS*LMQWSV
Trigger: CACAGACCACTGCATCAAGCAGCTGCCATTCCAACT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGTGAAGATGTTGGTGTaGTTCAGTTGGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAVKMLV*FSWNGS
Trigger: GCTGCCATTCCAACTGAAGCACACCAACATCTTCAC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGCAATAAAGGCAAAGTaGTGGGAGTACTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRAIKAK*WEYWLS
Trigger: GCTGAGCCAGTACTCCCAGCACTTTGCCTTTATTGC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGGAGGGCAGCACTCTTaGTCCGGCGCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKGGQHS*SGAAWH
Trigger: ATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCTTTCCACTTCTGTTaGGACCCGCTGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMESFHFC*DPLKLC
Trigger: GCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTCTTCAGACAACATCTaGTTCAAGATCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLSSDNI*FKISNP
Trigger: AGGGTTTGAGATCTTGAAGCAGATGTTGTCTGAAGA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACTGTGGCTGCAGCATTaGACAATCCTCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALWLQH*TILSSK
Trigger: CTTACTACTGAGGATTGTGCAATGCTGCAGCCACAG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAATATGTCTGCAGGGTTaGAGGACGTTTCTATATAAG +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPICLQG*RTFLYK
Trigger: CTTATATAGAAACGTCCTCCAACCCTGCAGACATAT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGTCAGCTCTACCTCTaGAGTAGAACAGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSQLYL*SRTAAS
Trigger: ACTAGCTGCTGTTCTACTCCAGAGGTAGAGCTGACT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGAGAGCTCATTACTTTaGCAATACTTCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPESSLL*QYFLLL
Trigger: TAGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGAGAGCTCATTACTTTaGCAATACTTCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLESSLL*QYFLLL
Trigger: TAGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAACTGCCTCAGTTCCTaGAGTTTCCATTTGTCATAT +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPNCLSS*SFHLSY
Trigger: ATATGACAAATGGAAACTCCAGGAACTGAGGCAGTT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCGTTCAGCTGACTCCTaGCGGGTGCAGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRSADS*RVQRNF
Trigger: GAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTATGTGCAGAGTGAATaGAAAGTGAGTTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKYVQSE*KVSCRD
Trigger: GTCTCTGCAACTCACTTTCCATTCACTCTGCACATA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATGTGGGTGGATTCCTTaGTCCAGGTATGCAATACCA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGACGWIP*SRYAIP
Trigger: TGGTATTGCATACCTGGACCAAGGAATCCACCCACA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTGTGGGTGGATTCCTTaGTCCAGGTATGCAATACCA +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACCGWIP*SRYAIP
Trigger: TGGTATTGCATACCTGGACCAAGGAATCCACCCACA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATTCCAATTCCAACTCTaGACAAATCTGATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPFQFQL*TNLMPE
Trigger: TTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAACAGAGCTTGTCCTCTaGCGTCTATCAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKTELVL*RLSSGW
Trigger: CCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGGAGATGCTGAACCCTaGAAATGTTCTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRGDAEP*KCSSTT
Trigger: TGTGGTGGAAGAACATTTCCAGGGTTCAGCATCTCC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGAAAAGTATATACGGTaGGTGGAAGCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACEKYIR*VEAVRL
Trigger: CAGCCTCACTGCTTCCACCCACCGTATATACTTTTC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTGGATGTTCAGCATCTaGAAGTCCTGGAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKWMFSI*KSWRHV
Trigger: CACGTGCCTCCAGGACTTCCAGATGCTGAACATCCA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGACGGATAATTAACTaGCCCAGAAGACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMERRIIN*PRRPRV
Trigger: CACCCTGGGTCTTCTGGGCCAGTTAATTATCCGTCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGCTGCTTGATGCAGTaGTCTGTGAAGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSCLMQ*SVKVAM
Trigger: CATTGCCACCTTCACAGACCACTGCATCAAGCAGCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAGCTGCTTGATGCAGTaGTCTGTGAAGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSCLMQ*SVKVAM
Trigger: CATTGCCACCTTCACAGACCACTGCATCAAGCAGCT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTGGTGTGCTTCAGTTaGAATGGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALVCFS*NGSCLM
Trigger: CATCAAGCAGCTGCCATTCCAACTGAAGCACACCAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATTTAGCAGATCGGTCTaGAGGAAGGTGGCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKFSRSV*RKVAWV
Trigger: GACCCATGCCACCTTCCTCCAGACCGATCTGCTAAA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTCTGCAGTTCATATATaGCCCGGAGAATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSAVHI*PGECAE
Trigger: CTCTGCACATTCTCCGGGCCATATATGAACTGCAGA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAAGGCCGGGACAAGCATaGCAAGATAATCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRRPGQA*QDNHVC
Trigger: ACAGACATGATTATCTTGCCATGCTTGTCCCGGCCT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACTGGAAATCAGCTTCTaGGTCACAGGATTTGATTCA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQLEISF*VTGFDS
Trigger: TGAATCAAATCCTGTGACCCAGAAGCTGATTTCCAG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCATATAGGACTGAGGTaGCCTCGTTCACACGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALHIGLR*PRSHGR
Trigger: TCTTCCGTGTGAACGAGGCCACCTCAGTCCTATATG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACATATAGGACTGAGGTaGCCTCGTTCACACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEHIGLR*PRSHGR
Trigger: TCTTCCGTGTGAACGAGGCCACCTCAGTCCTATATG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTGCACCTCCATTCCTaGTTCCTCCATGAACTGACA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALHLHS*FLHELT
Trigger: TGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATCAGTAGTAAGTGGATaGCTTTCAGGCGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSVVSG*LSGADD
Trigger: GTCATCAGCGCCTGAAAGCCATCCACTTACTACTGA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGCGGGTGGCCTTGTTTaGGTAGTTGATGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFAGGLV*VVDGQA
Trigger: AGCCTGGCCATCAACTACCCAAACAAGGCCACCCGC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAATATCATTGATGAGTaGATGCCAAGGCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTNIIDE*MPRPSF
Trigger: AAAGGAGGGCCTTGGCATTCACTCATCAATGATATT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACTTGGTTACTGACTTaGGCTTATCCATCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMETWLLT*AYPSLG
Trigger: GCCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGAGCAGGTTCTGCCTaGCAGATGCCATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGAGSA*QMPWMR
Trigger: TCTCATCCATGGCATCTGTCAGGCAGAACCTGCTCC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAATTTTTCAAACCGTTTaGAGTGTTCTTCTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPIFQTV*SVLLRE
Trigger: TTCACGCAGAAGAACACTTCAAACGGTTTGAAAAAT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATCCAAGGTCATCAGATaGGCAACCAATCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRSKVIR*ATNPAF
Trigger: AAAAGCAGGATTGGTTGCTCATCTGATGACCTTGGA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGCAGGGTGGCCCCATaGATATTCTCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSRVAP*IFSVSL
Trigger: AAGGGACACAGAGAATATTCATGGGGCCACCCTGCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAGAGTGAATGGAAAGTaGGTTGCAGAGACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLRVNGK*VAETAC
Trigger: GCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATTACTGCTGTCAGAATaGAAGAGGAACTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRLLLSE*KRNCSR
Trigger: TCGGCTGCAGTTCCTCTTTCATTCTGACAGCAGTAA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGGAGAGTTCAGGACTaGAGTCAGTTTTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKWRVQD*SQFCLG
Trigger: TCCCAGGCAAAACTGACTTCAGTCCTGAACTCTCCA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGTGGCGTTCACAGCTTaGTCAATAGTGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKVAFTA*SIVEPA
Trigger: TGCTGGTTCCACTATTGATCAAGCTGTGAACGCCAC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCAAACATGCCATCCTaGCACTCATCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMESNMPS*HSSIHS
Trigger: AGAGTGGATGGATGAGTGTCAGGATGGCATGTTTGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATCATTCTCCGGCCTATaGTCAAACCCTGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSFSGL*SNPGSG
Trigger: ACCACTGCCAGGGTTTGATCATAGGCCGGAGAATGA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTCTTCTACCAGTACCTaGGCTGACACTTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSSTST*ADTSGC
Trigger: ACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCTGAAAGGACCTTCATaGCTGCAGCATCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLLKGPS*LQHLLL
Trigger: CAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATTTTATATAAACCTTTaGGAGCCAGGGACAGGACCC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRFYINL*EPGTGP
Trigger: GGGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTTGACGAGTACAGCATaGTGGACAGAATCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACLTSTA*WTESLG
Trigger: ACCTAGAGATTCTGTCCATCATGCTGTACTCGTCAA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGCATTGAGGGCATCATaGGCCATCAAGAAGCATATT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACALRAS*AIKKHI
Trigger: AATATGCTTCTTGATGGCTCATGATGCCCTCAATGC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAACATTGCTGGGGATGTaGACATCACGAACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKTLLGM*TSRTSC
Trigger: GCAGGAAGTTCGTGATGTGCACATCCCCAGCAATGT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCTGCTTTTTACGAACTaGCTCAGTTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACLLFTN*LSSWSF
Trigger: GAAACTCCAGGAACTGAGGCAGTTCGTAAAAAGCAG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGAATGGAAAGTGAGTTaGAGAGACTGCTTGCGTTCG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALEWKVS*RDCLRS
Trigger: CGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGCGAGCTCTTTGGCTaGAGCATCTGTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGELFG*SICALE
Trigger: CTCAAGAGCACAGATGCTGCAGCCAAAGAGCTCGCC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCATGCTTGCCAGAAACTaGCCCACATATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLMLARN*PTYFSI
Trigger: TATTGAAAAATATGTGGGGCAGTTTCTGGCAAGCAT...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGACCAGTTGACGAGCTaGCATGGAAAACACCGAATT +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLDQLTS*HGKHRI
Trigger: AATTCGGTGTTTTCCATGGCAGCTCGTCAACTGGTC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCATATAAGTCTGGAGTaGGATACACCAGAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLHISLE*DTPERQ
Trigger: TTGCCGCTCTGGTGTATCGCACTCCAGACTTATATG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTATTCGAATCCCATCTaGCAGGGAATACACCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACYSNPI*QGIHLR
Trigger: TCTCAGGTGTATTCCCTGGCAGATGGGATTCGAATA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGATCCACTCTGAGTTCTaGTTGGCATCAGCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLIHSEF*LASASS
Trigger: TGAACTCGCTGATGCCAAGCAGAACTCAGAGTGGAT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAATGTGCATTTTCCTCTaGTTCTCTGGATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRMCIFL*FSGSSW
Trigger: CCAAGAGGATCCAGAGAAGCAGAGGAAAATGCACAT...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGACATCGGTATCGATaGCAGGGGGCAATCTCATCA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKRHRYR*QGAISS
Trigger: TGATGAGATTGCCCCCTGGCATCGATACCGATGTCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGGCTGGATGAGCCTCTaGCGGTCACTGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKGWMSL*RSLMRM
Trigger: CATCCGCATCAGTGACCGGCAGAGGCTCATCCAGCC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGGAGAGATCTTCACCTaGCTTTTTCTTCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQGEIFT*LFLLLI
Trigger: TATAAGCAGAAGAAAAAGGCAGGTGAAGATCTCTCC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGCTTCTGGGAACACTCTaGAAACACTTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLLGTL*KHLLRV
Trigger: AACCCTGAGCAAGTGTTTGCAGAGTGTTCCCAGAAG...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTGAAGATGTTGGTGTaGTTCAGTTGGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRVKMLV*FSWNGS
Trigger: GCTGCCATTCCAACTGAAGCACACCAACATCTTCAC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAATGTAGGTCATATGTaGAGGGCCACTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALNVGHM*RATKLQ
Trigger: CTGGAGCTTAGTGGCCCTGCACATATGACCTACATT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAATGTAGGTCATATGTaGAGGGCCACTAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLNVGHM*RATKLQ
Trigger: CTGGAGCTTAGTGGCCCTGCACATATGACCTACATT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCTGTGGCTGCAGCATTaGACAATCCTCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLLWLQH*TILSSK
Trigger: CTTACTACTGAGGATTGTGCAATGCTGCAGCCACAG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGAGGTCACTGTGGCTaGAGCATTGCACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRGHCG*SIAQSS
Trigger: TGAGGATTGTGCAATGCTGCAGCCACAGTGACCTCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGAGCCCAATCTTGATGTaGGCTCCAGCCCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKSPILM*APALTP
Trigger: GGGGGTGAGGGCTGGAGCCCACATCAAGATTGGGCT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGAACTGATGATCTCATaGTGCACATGTTATTACAGT +
Preference number: 4 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLELMIS*CTCYYS
Trigger: ACTGTAATAACATGTGCACCATGAGATCATCAGTTC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTTGTGCAGCACTGTCTaGACAAAGGCAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALLCSTV*TKAGFV
Trigger: GACAAATCCTGCCTTTGTCCAGACAGTGCTGCACAA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAACTGCCTCAGTTCCTaGAGTTTCCATTTGTCATAT +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKNCLSS*SFHLSY
Trigger: ATATGACAAATGGAAACTCCAGGAACTGAGGCAGTT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGCTGCATCAGGTCATaGGAAAGCTGCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKCCIRS*ESCWMN
Trigger: GTTCATCCAGCAGCTTTCCCATGACCTGATGCAGCA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTATGTGCAGAGTGAATaGAAAGTGAGTTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTYVQSE*KVSCRD
Trigger: GTCTCTGCAACTCACTTTCCATTCACTCTGCACATA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCCATGGCGAGCTCTTTaGCTGCAGCATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEPWRAL*LQHLCS
Trigger: AGAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTATAAGTCCCAACTTTaGTGTCATAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWYKSQL*CHSVSS
Trigger: GGAAGACACGCTATGACACCAAAGTTGGGACTTATA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAAATCAAGGAGAAAATaGCGGCAGGGATCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESKSRRK*RQGSSG
Trigger: CCCTGATGATCCCTGCCGCCATTTTCTCCTTGATTT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAAACTATATCTGTCTTTaGGGCCTGTTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQNYICL*GLFSTC
Trigger: GCATGTAGAAAACAGGCCCCAAAGACAGATATAGTT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGGAGATGCTGAACCCTaGAAATGTTCTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRGDAEP*KCSSTT
Trigger: TGTGGTGGAAGAACATTTCCAGGGTTCAGCATCTCC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAGTATGCTCTGCCCTTaGGCTTTCCGCAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSMLCP*AFRKER
Trigger: TCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAGTATGCTCTGCCCTTaGGCTTTCCGCAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSMLCP*AFRKER
Trigger: TCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGAAAAGTATATACGGTaGGTGGAAGCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLEKYIR*VEAVRL
Trigger: CAGCCTCACTGCTTCCACCCACCGTATATACTTTTC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGAGGCACGTGAGCACTaGCAGGTGCATCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFEAREH*QVHLKP
Trigger: AGGTTTCAGATGCACCTGCCAGTGCTCACGTGCCTC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCACTTGCTCAGGGTTTaGAGTAATCGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLHLLRV*SNRLLF
Trigger: GAAGAGAAGGCGATTACTCCAAACCCTGAGCAAGTG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACACTTGCTCAGGGTTTaGAGTAATCGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEHLLRV*SNRLLF
Trigger: GAAGAGAAGGCGATTACTCCAAACCCTGAGCAAGTG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGTGCTTCAGTTGGAATaGCAGCTGCTTGATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKVLQLE*QLLDAV
Trigger: CACTGCATCAAGCAGCTGCCATTCCAACTGAAGCAC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTTGGTGTGCTTCAGTTaGAATGGCAGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESLVCFS*NGSCLM
Trigger: CATCAAGCAGCTGCCATTCCAACTGAAGCACACCAA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTCTGCAGTTCATATATaGCCCGGAGAATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLSAVHI*PGECAE
Trigger: CTCTGCACATTCTCCGGGCCATATATGAACTGCAGA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGGATCTTCTCCCACTaGTGCTTTTCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRIFSH*CFSSSC
Trigger: GCAGCTGGAAGAAAAGCACCAGTGGGAGAAGATCCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATTGCACCTCCATTCCTaGTTCCTCCATGAACTGACA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRLHLHS*FLHELT
Trigger: TGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTTGCACCTCCATTCCTaGTTCCTCCATGAACTGACA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESLHLHS*FLHELT
Trigger: TGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCACTACTGCTGGACATaGCTAGTTCATCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESHYCWT*LVHHSL
Trigger: AAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAATACAGAGTATCTCCTaGAAGCTCAAAATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPIQSIS*KLKIFP
Trigger: TGGAAAGATTTTGAGCTTCCAGGAGATACTCTGTAT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGAAGGTGGTCCTCGGTaGTTAAGGCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFEGGPR*LRPAGT
Trigger: AGTACCTGCTGGCCTTAACCACCGAGGACCACCTTC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGAAGGTGGTCCTCGGTaGTTAAGGCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEEGGPR*LRPAGT
Trigger: AGTACCTGCTGGCCTTAACCACCGAGGACCACCTTC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACTGAAAATATGTCGATaGAACCTGGAACAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRLKICR*NLEQES
Trigger: GCTCTCTTGTTCCAGGTTTCATCGACATATTTTCAG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAATATCATTGATGAGTaGATGCCAAGGCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACNIIDE*MPRPSF
Trigger: AAAGGAGGGCCTTGGCATTCACTCATCAATGATATT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGATTTCTTTACTCTCTaGAAGCCAACAGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALDFFTL*KPTALR
Trigger: TCTGAGGGCTGTTGGCTTTCAGAGAGTAAAGAAATC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATTAACATCACAAGCCTaGAGAGTCAACTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKLTSQA*RVNWRG
Trigger: GCCTCTCCAGTTGACTCTTCAGGCTTGTGATGTTAA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCCAAGGTCATCAGATaGGCAACCAATCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSKVIR*ATNPAF
Trigger: AAAAGCAGGATTGGTTGCTCATCTGATGACCTTGGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTGCACTGTTGTAACTTaGCATCTGCTTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLCTVVT*HLLHPT
Trigger: AGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGATGGCAGCCCCATTaGGAAGAGTGTTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRWQPH*EECFSL
Trigger: AAGTGAGAAACACTCTTCTCAATGGGGCTGCCATCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGGAAGATGACCAGTTaGCGAGCTGCCATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRKMTS*RAAMEN
Trigger: GTTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGACAAATCTGATGCCTaGAGACAGGTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALDKSDA*RQVSTM
Trigger: CATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAACTCTGGACAAATCTaGTGCCTGAAGACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRNSGQI*CLKTGF
Trigger: GAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCTTGGGACATGTTCATaGGGAGATCTGGTAACTGAA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLLGTCS*GDLVTE
Trigger: TTCAGTTACCAGATCTCCTCATGAACATGTCCCAAG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCACTGTCATGGACACTaGTGTTTTCTTGGGACATGT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESHCHGH*CFLGTC
Trigger: ACATGTCCCAAGAAAACATCAGTGTCCATGACAGTG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCCAGAAGACCCAGGGTaGGGTGGTAGGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFPEDPG*GGRFHS
Trigger: TGAATGAAACCTACCACCTCACCCTGGGTCTTCTGG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCTACTTCTGCTGGCTaGAGACGGATAATTAACTGG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMESTSAG*RRIINW
Trigger: CCAGTTAATTATCCGTCTTCAGCCAGCAGAAGTAGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCTACTTCTGCTGGCTaGAGACGGATAATTAACTGG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSTSAG*RRIINW
Trigger: CCAGTTAATTATCCGTCTTCAGCCAGCAGAAGTAGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGAGGTTGTGCTTGGCTaGAAGGACCTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFEVVLG*KDLHDC
Trigger: GCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
CDS-3UTR TCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTTTTATATAAACCTTTaGGAGCCAGGGACAGGACCC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLFYINL*EPGTGP
Trigger: GGGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATTGACGAGTACAGCATaGTGGACAGAATCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRLTSTA*WTESLG
Trigger: ACCTAGAGATTCTGTCCATCATGCTGTACTCGTCAA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACCATCAAACCTCTTCTaGACCTCTAGGAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEPSNLF*TSRKNE
Trigger: TTCGTTCTTCCTAGAGGTTCAGAAGAGGTTTGATGG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTCCTCAGTGTTGCACTaGGGGTCAAATTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALSSVLH*GSNLIE
Trigger: CTCAATCAAATTTGACCCTCAGTGCAACACTGAGGA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTCATTGATGAGTGAATaGCAAGGCCCTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLSLMSE*QGPPLT
Trigger: AGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGAGTGTGAGCGCGCACTaGCATCTGACTGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKSVSAH*HLTASR
Trigger: CCTACTGGCAGTCAGATGGCAGTGCGCGCTCACACT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGTCAGTGGCAGCCACTaGAATGGACAGATGCCTAAG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFVSGSH*NGQMPK
Trigger: CTTAGGCATCTGTCCATTGCAGTGGCTGCCACTGAC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAAGCCACTTTCCTTTTaGTGCATCAGGTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRKPLSF*CIRSWE
Trigger: TTCCCATGACCTGATGCAGCAAAAGGAAAGTGGCTT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAATCACTCTCATGCTTaGCAGAAACTGCCCCACATA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALNHSHA*QKLPHI
Trigger: TATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACCCACTCATTGTTACTaGTGTCAGAATGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAPTHCY*CQNERG
Trigger: TCCTCTTTCATTCTGACAGCAGTAACAATGAGTGGG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACCCACTCATTGTTACTaGTGTCAGAATGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRPTHCY*CQNERG
Trigger: TCCTCTTTCATTCTGACAGCAGTAACAATGAGTGGG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCGGGAGACAAGGAGTTaGAAGTCCAAACCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMERETRS*KSKPQD
Trigger: GTCTTGGGGTTTGGACTTGCAACTCCTTGTCTCCCG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCGGGAGACAAGGAGTTaGAAGTCCAAACCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRETRS*KSKPQD
Trigger: GTCTTGGGGTTTGGACTTGCAACTCCTTGTCTCCCG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATATTCGAATCCCATCTaGCAGGGAATACACCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEYSNPI*QGIHLR
Trigger: TCTCAGGTGTATTCCCTGGCAGATGGGATTCGAATA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACTCAGCAAGGACTTCTaGTTCATCTCTAACATCCAT +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGALSKDF*FISNIH
Trigger: ATGGATGTTAGAGATGAAGCAGAAGTCCTTGCTGAG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTATGTGCATTTTCCTCTaGTTCTCTGGATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESMCIFL*FSGSSW
Trigger: CCAAGAGGATCCAGAGAAGCAGAGGAAAATGCACAT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCGAGCAATAAACATGTaGATTTTCCTCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWRAINM*IFLCFS
Trigger: AGAGAAGCAGAGGAAAATGCACATGTTTATTGCTCG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTATGTCGATGAAACCTaGAACAAGAGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLYVDET*NKRAGL
Trigger: CAAGCCTGCTCTCTTGTTCCAGGTTTCATCGACATA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATATGTCGATGAAACCTaGAACAAGAGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRYVDET*NKRAGL
Trigger: CAAGCCTGCTCTCTTGTTCCAGGTTTCATCGACATA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTGTAGCTCTGGTCAGTaGCAGCCACTGCAATGGACA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFCSSGQ*QPLQWT
Trigger: TGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGAAGTCCGTAGATCCTaGAGAGAGGGACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKEVRRS*REGQRW
Trigger: CCACCGCTGTCCCTCTCTCCAGGATCTACGGACTTC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTACTGTGTGTCCAAGTaGTCAGTGATGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALYCVSK*SVMVHR
Trigger: TCTGTGTACCATCACTGACCACTTGGACACACAGTA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAACCATCCCTTGTCCATaGCTCCACAAGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRTIPCP*LHKKIF
Trigger: GAAAATCTTCTTGTGGAGCCATGGACAAGGGATGGT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATGCTGCATCAGGTCATaGGAAAGCTGCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILCCIRS*ESCWMN
Trigger: GTTCATCCAGCAGCTTTCCCATGACCTGATGCAGCA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATGTGGGTGGATTCCTTaGTCCAGGTATGCAATACCA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKCGWIP*SRYAIP
Trigger: TGGTATTGCATACCTGGACCAAGGAATCCACCCACA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTTCATAGTTGTGGGTaGATTCCTTGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAFHSCG*IPWSRY
Trigger: ATACCTGGACCAAGGAATCCACCCACAACTATGAAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATCTTCTTCACTCCACTaGCTAATCACACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMESSSLH*LITLSW
Trigger: CCATGACAGTGTGATTAGCCAGTGGAGTGAAGAAGA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGACTCTGAGTTCTGCTTaGCATCAGCGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALTLSSA*HQRVHL
Trigger: AAGATGAACTCGCTGATGCCAAGCAGAACTCAGAGT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTGTGATGCTGTGAGTTaGCAAATGGCCATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALCDAVS*QMAIGV
Trigger: TACTCCTATGGCCATTTGCCAACTCACAGCATCACA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATTAAGACCTTTGCCCTaGTGGGCCTTCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILLRPLP*WAFIRQ
Trigger: CTGTCTGATGAAGGCCCACCAGGGCAAAGGTCTTAA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTTTAGCAGATCGGTCTaGAGGAAGGTGGCATGGGTC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFFSRSV*RKVAWV
Trigger: GACCCATGCCACCTTCCTCCAGACCGATCTGCTAAA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTTTAGCAGATCGGTCTaGAGGAAGGTGGCATGGGTC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEFSRSV*RKVAWV
Trigger: GACCCATGCCACCTTCCTCCAGACCGATCTGCTAAA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCCAGTTCTTCTTCTTaGTCTCCTCGTTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSSSSS*SPRSSS
Trigger: GCTAGATGAACGAGGAGACCAAGAAGAAGAACTGGA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGGCCGGGACAAGCATaGCAAGATAATCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKRPGQA*QDNHVC
Trigger: ACAGACATGATTATCTTGCCATGCTTGTCCCGGCCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGCTCGCTCTCTGTGCTaGAAATCAGCTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEARSLC*KSASGS
Trigger: TGACCCAGAAGCTGATTTCCAGCACAGAGAGCGAGC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGATACAGAGTATCTCCTaGAAGCTCAAAATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SPRPAADPASYSVALGKKIQSIS*KLKIFP
Trigger: TGGAAAGATTTTGAGCTTCCAGGAGATACTCTGTAT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGACATAGAGCTGACTaGTGTTGGCATTTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKGHRAD*CWHFLA
Trigger: TGCTAGAAAATGCCAACATCAGTCAGCTCTATGTCC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGATTTCTTTACTCTCTaGAAGCCAACAGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKDFFTL*KPTALR
Trigger: TCTGAGGGCTGTTGGCTTTCAGAGAGTAAAGAAATC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTGTCCAAGTGGTCAGTaGTGGTACACAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFCPSGQ*WYTESS
Trigger: TGAGCTCTCTGTGTACCATCACTGACCACTTGGACA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTGCACTGTTGTAACTTaGCATCTGCTTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKCTVVT*HLLHPT
Trigger: AGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGATGGCAGCCCCATTaGGAAGAGTGTTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRWQPH*EECFSL
Trigger: AAGTGAGAAACACTCTTCTCAATGGGGCTGCCATCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCATCAGGGATGTTCTTaGCCTCCTTCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFHQGCS*PPSHPC
Trigger: ACAAGGATGGGAAGGAGGTCAAGAACATCCCTGATG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTTCTGTAGGAGATGCTaGACCCTGGAAATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKFCRRC*TLEMFF
Trigger: GAAGAACATTTCCAGGGTTCAGCATCTCCTACAGAA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGATTCTGTGCAATACTaGATTATCCTCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRDSVQY*IILRTS
Trigger: TGAAGTCCTGAGGATAATTCAGTATTGCACAGAATC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCCCATATCCAAAAGATaGAGCAGGGCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFPISKR*SRAVWT
Trigger: TGTCCAGACAGCCCTGCTTCATCTTTTGGATATGGG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGGAGATCTGGTAACTaGATGTCAACAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRRSGN*MSTKKA
Trigger: TGCCTTCTTTGTTGACATTCAGTTACCAGATCTCCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGACATCACGAACTTCCTaGAGGTCACTGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMETSRTS*RSLALL
Trigger: AAGGAGTGCCAGTGACCTGCAGGAAGTTCGTGATGT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAATCACTCTCATGCTTaGCAGAAACTGCCCCACATA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKNHSHA*QKLPHI
Trigger: TATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCTCCTTCAGGGTCACTaGACAGCTTCTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFLLQGH*TASSTA
Trigger: AGCTGTTGAAGAAGCTGTGCAGTGACCCTGAAGGAG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTATTCGAATCCCATCTaGCAGGGAATACACCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKYSNPI*QGIHLR
Trigger: TCTCAGGTGTATTCCCTGGCAGATGGGATTCGAATA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATCCACTCTGAGTTCTaGTTGGCATCAGCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILIHSEF*LASASS
Trigger: TGAACTCGCTGATGCCAAGCAGAACTCAGAGTGGAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTACCAGGCCTCAAACATaGCATCCTGACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFTRPQT*HPDTHP
Trigger: TGGATGAGTGTCAGGATGGCATGTTTGAGGCCTGGT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTAGACATCGGTATCGATaGCAGGGGGCAATCTCATCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRHRYR*QGAISS
Trigger: TGATGAGATTGCCCCCTGGCATCGATACCGATGTCT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTAGTTGGAATGGCAGCTaGTTGATGCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSWNGS*LMQWSV
Trigger: CACAGACCACTGCATCAAGCAGCTGCCATTCCAACT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGAACTGATGATCTCATaGTGCACATGTTATTACAGT +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWELMIS*CTCYYS
Trigger: ACTGTAATAACATGTGCACCATGAGATCATCAGTTC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCCCTAAGCACAACATCTaGCTTCATCTTCAAACGTAT +
Preference number: 4 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACPKHNI*LHLQTY
Trigger: ATACGTTTGAAGATGAAGCCAGATGTTGTGCTTAGG...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAAAGCAGAAGGCCTCCTaGATCCTTATCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAKQKAS*ILITKI
Trigger: TATTTTAGTGATAAGGATCCAGGAGGCCTTCTGCTT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATTTCATAGTTGTGGGTaGATTCCTTGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEFHSCG*IPWSRY
Trigger: ATACCTGGACCAAGGAATCCACCCACAACTATGAAA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTAGAAGGCAAGATCACTaGGTTCCCAGCCCATATCCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRRQDH*VPSPYP
Trigger: TGGATATGGGCTGGGAACCCAGTGATCTTGCCTTCT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATCAAACCCTGGCAGTaGTCACACGTAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILIKPWQ*SHVNSM
Trigger: CATGGAGTTTACGTGTGACCACTGCCAGGGTTTGAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTTAAGACCTTTGCCCTaGTGGGCCTTCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMELRPLP*WAFIRQ
Trigger: CTGTCTGATGAAGGCCCACCAGGGCAAAGGTCTTAA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGGCCGGGACAAGCATaGCAAGATAATCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRPGQA*QDNHVC
Trigger: ACAGACATGATTATCTTGCCATGCTTGTCCCGGCCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAGGATCTTCTCCCACTaGTGCTTTTCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMERIFSH*CFSSSC
Trigger: GCAGCTGGAAGAAAAGCACCAGTGGGAGAAGATCCT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTACTTGGTTACTGACTTaGGCTTATCCATCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFTWLLT*AYPSLG
Trigger: GCCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAATAACACTTGGTTACTaGCTTGAGCTTATCCATCTC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRITLGY*LELIHL
Trigger: GAGATGGATAAGCTCAAGTCAGTAACCAAGTGTTAT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAAAATATGTGCAGAGTaGATGGAAAGTGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALKICAE*MESELQ
Trigger: CTGCAACTCACTTTCCATTCACTCTGCACATATTTT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAAAATATGTGCAGAGTaGATGGAAAGTGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEKICAE*MESELQ
Trigger: CTGCAACTCACTTTCCATTCACTCTGCACATATTTT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTACTTGGGACATGTTCATaGGGAGATCTGGTAACTGAA +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILLGTCS*GDLVTE
Trigger: TTCAGTTACCAGATCTCCTCATGAACATGTCCCAAG...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCTGAAAGGACCTTCATaGCTGCAGCATCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMELKGPS*LQHLLL
Trigger: CAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGACTGAGAAGCAGCTCTaGAGGAGCTTCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKTEKQL*RSFSRR
Trigger: CCTTCTGCTGAAGCTCCTGCAGAGCTGCTTCTCAGT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGACCAGTTGACGAGCTaGCATGGAAAACACCGAATT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEDQLTS*HGKHRI
Trigger: AATTCGGTGTTTTCCATGGCAGCTCGTCAACTGGTC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCACCTCAAAATAAGTTaGTCCTGGGCTAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLHLKIS*SWANKD
Trigger: GTCTTTATTAGCCCAGGAGCAACTTATTTTGAGGTG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCTCAGCAAGGACTTCTaGTTCATCTCTAACATCCAT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKLSKDF*FISNIH
Trigger: ATGGATGTTAGAGATGAAGCAGAAGTCCTTGCTGAG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGACTTCAAGTATGCTCTaGCCTTGGGCTTTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMETSSML*PWAFRK
Trigger: TTTGCGGAAAGCCCAAGGGCAGAGCATACTTGAAGT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTATCCACTCTGAGTTCTaGTTGGCATCAGCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFIHSEF*LASASS
Trigger: TGAACTCGCTGATGCCAAGCAGAACTCAGAGTGGAT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCGAGCAATAAACATGTaGATTTTCCTCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESRAINM*IFLCFS
Trigger: AGAGAAGCAGAGGAAAATGCACATGTTTATTGCTCG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGAGAGATCTTCACCTaGCTTTTTCTTCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGEIFT*LFLLLI
Trigger: TATAAGCAGAAGAAAAAGGCAGGTGAAGATCTCTCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCTTCTGGGAACACTCTaGAAACACTTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMELLGTL*KHLLRV
Trigger: AACCCTGAGCAAGTGTTTGCAGAGTGTTCCCAGAAG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGACAATGGCTATCCATaGTGGTTTGCAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFDNGYP*WFAEGD
Trigger: GTCACCTTCTGCAAACCAGCATGGATAGCCATTGTC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCTTCAGACAACATCTaGTTCAAGATCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSSDNI*FKISNP
Trigger: AGGGTTTGAGATCTTGAAGCAGATGTTGTCTGAAGA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAACTGCCTCAGTTCCTaGAGTTTCCATTTGTCATAT +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLNCLSS*SFHLSY
Trigger: ATATGACAAATGGAAACTCCAGGAACTGAGGCAGTT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAAGCAGAAGGCCTCCTaGATCCTTATCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALKQKAS*ILITKI
Trigger: TATTTTAGTGATAAGGATCCAGGAGGCCTTCTGCTT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTTCCAATTCCAACTCTaGACAAATCTGATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESFQFQL*TNLMPE
Trigger: TTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAACTATATCTGTCTTTaGGGCCTGTTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMENYICL*GLFSTC
Trigger: GCATGTAGAAAACAGGCCCCAAAGACAGATATAGTT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAGTATGCTCTGCCCTTaGGCTTTCCGCAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESMLCP*AFRKER
Trigger: TCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGACACTGATGTTTTCTTaGGACATGTTCATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLTLMFS*DMFMRR
Trigger: TCTCCTCATGAACATGTCCCAAGAAAACATCAGTGT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACACTGATGTTTTCTTaGGACATGTTCATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMETLMFS*DMFMRR
Trigger: TCTCCTCATGAACATGTCCCAAGAAAACATCAGTGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTGGATGTTCAGCATCTaGAAGTCCTGGAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKWMFSI*KSWRHV
Trigger: CACGTGCCTCCAGGACTTCCAGATGCTGAACATCCA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATCCAGTTCTTCTTCTTaGTCTCCTCGTTCATCTAGC +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSSSSS*SPRSSS
Trigger: GCTAGATGAACGAGGAGACCAAGAAGAAGAACTGGA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCAGAAGCATATTCTGGTaGGTTCATCCAAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTRSIFW*VHPNFQ
Trigger: TTGAAAATTTGGATGAACCCACCAGAATATGCTTCT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGAGAAGCATATTCTGGTaGGTTCATCCAAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWRSIFW*VHPNFQ
Trigger: TTGAAAATTTGGATGAACCCACCAGAATATGCTTCT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTCAAGAAGCATATTCTaGTGGGTTCATCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTSRSIF*WVHPNF
Trigger: AAAATTTGGATGAACCCACCAGAATATGCTTCTTGA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTCTGCAGTTCATATATaGCCCGGAGAATGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSAVHI*PGECAE
Trigger: CTCTGCACATTCTCCGGGCCATATATGAACTGCAGA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGATAACACTTGGTTACTaGCTTGAGCTTATCCATCTC +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKITLGY*LELIHL
Trigger: GAGATGGATAAGCTCAAGTCAGTAACCAAGTGTTAT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTGTCCAAGTGGTCAGTaGTGGTACACAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKCPSGQ*WYTESS
Trigger: TGAGCTCTCTGTGTACCATCACTGACCACTTGGACA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTCCAAGGTCATCAGATaGGCAACCAATCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSKVIR*ATNPAF
Trigger: AAAAGCAGGATTGGTTGCTCATCTGATGACCTTGGA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGCATCAGGGATGTTCTTaGCCTCCTTCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKHQGCS*PPSHPC
Trigger: ACAAGGATGGGAAGGAGGTCAAGAACATCCCTGATG...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGATTCTGTGCAATACTaGATTATCCTCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKDSVQY*IILRTS
Trigger: TGAAGTCCTGAGGATAATTCAGTATTGCACAGAATC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGGAGATCTGGTAACTaGATGTCAACAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILRRSGN*MSTKKA
Trigger: TGCCTTCTTTGTTGACATTCAGTTACCAGATCTCCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGCCATTGGATGGGCTGTaGTGCTGTGAGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKPLDGL*CCELAN
Trigger: ATTTGCCAACTCACAGCATCACAGCCCATCCAATGG...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTACCAGTACCTGAGCTaGCACTTCTGGATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKYQYLS*HFWMFS
Trigger: GCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTTTTATATAAACCTTTaGGAGCCAGGGACAGGACCC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFFYINL*EPGTGP
Trigger: GGGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCCATCAAACCTCTTCTaGACCTCTAGGAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFPSNLF*TSRKNE
Trigger: TTCGTTCTTCCTAGAGGTTCAGAAGAGGTTTGATGG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGATTTGAAGTGTTCTTCTaGGTGAAACTTATTAGAAGG +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRFEVFF*VKLIRR
Trigger: CCTTCTAATAAGTTTCACGCAGAAGAACACTTCAAA...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAGGCCTGTTTTCTACATaGCTGTATGAATCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKGLFST*LYESFE
Trigger: TTCAAAGGATTCATACAGGCATGTAGAAAACAGGCC...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTATGTGCATTTTCCTCTaGTTCTCTGGATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFMCIFL*FSGSSW
Trigger: CCAAGAGGATCCAGAGAAGCAGAGGAAAATGCACAT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGCAAGGAAGCAAGTCTTaGAGAGGTCCATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKQGSKS*RGPCHC
Trigger: GCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTG...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAATAGGAGTATTTCTTTaGTGTGTAGCATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRIGVFL*CVASIA
Trigger: TGCTATGGATGCTACACAGCAAAGAAATACTCCTAT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTATAGGAGTATTTCTTTaGTGTGTAGCATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESIGVFL*CVASIA
Trigger: TGCTATGGATGCTACACAGCAAAGAAATACTCCTAT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAATAGGAGTATTTCTTTaGTGTGTAGCATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: PSRQSCLLRVKGILALMEIGVFL*CVASIA
Trigger: TGCTATGGATGCTACACAGCAAAGAAATACTCCTAT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGAGAGGTCACTGTGGCTaGAGCATTGCACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKRGHCG*SIAQSS
Trigger: TGAGGATTGTGCAATGCTGCAGCCACAGTGACCTCT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTATGTCGATGAAACCTaGAACAAGAGAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFYVDET*NKRAGL
Trigger: CAAGCCTGCTCTCTTGTTCCAGGTTTCATCGACATA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGATATGTCTGCAGGGTTaGAGGACGTTTCTATATAAG +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKICLQG*RTFLYK
Trigger: CTTATATAGAAACGTCCTCCAACCCTGCAGACATAT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGCCTAAGCACAACATCTaGCTTCATCTTCAAACGTAT +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKPKHNI*LHLQTY
Trigger: ATACGTTTGAAGATGAAGCCAGATGTTGTGCTTAGG...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAAGCAGAAGGCCTCCTaGATCCTTATCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKKQKAS*ILITKI
Trigger: TATTTTAGTGATAAGGATCCAGGAGGCCTTCTGCTT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATTTCATAGTTGTGGGTaGATTCCTTGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILFHSCG*IPWSRY
Trigger: ATACCTGGACCAAGGAATCCACCCACAACTATGAAA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAAAATAAGTTGCTCCTaGGCTAATAAAGACAGACAC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRKISCS*ANKDRH
Trigger: GTGTCTGTCTTTATTAGCCCAGGAGCAACTTATTTT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATATAAGTCCCAACTTTaGTGTCATAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILYKSQL*CHSVSS
Trigger: GGAAGACACGCTATGACACCAAAGTTGGGACTTATA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACATTATGGGGTTCATTaGCATTATCCATATAAACAC +
Preference number: 4 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRHYGVH*HYPYKH
Trigger: GTGTTTATATGGATAATGCCAATGAACCCCATAATG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAAGATGATCACATTATaGGGTTCATTGGCATTATCC +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESKMITL*GSLALS
Trigger: GGATAATGCCAATGAACCCCATAATGTGATCATCTT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAAAGATGATCACATTATaGGGTTCATTGGCATTATCC +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRKMITL*GSLALS
Trigger: GGATAATGCCAATGAACCCCATAATGTGATCATCTT...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCTGAAAATATGTCGATaGAACCTGGAACAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFLKICR*NLEQES
Trigger: GCTCTCTTGTTCCAGGTTTCATCGACATATTTTCAG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTCTTTTTGTACCAGTTaGTCCAGAGACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSFCTS*SRDSFR
Trigger: TCTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGATTTTTCAAACCGTTTaGAGTGTTCTTCTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKIFQTV*SVLLRE
Trigger: TTCACGCAGAAGAACACTTCAAACGGTTTGAAAAAT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAAAATATGTGCAGAGTaGATGGAAAGTGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILKICAE*MESELQ
Trigger: CTGCAACTCACTTTCCATTCACTCTGCACATATTTT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTATTGCACCAGGAATGTaGACTTTATCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFIAPGM*TLSSKL
Trigger: CAGCTTTGAGGATAAAGTTCACATTCCTGGTGCAAT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTTTGAAGTGTTCTTCTaGGTGAAACTTATTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPSRQSCLLRVKGILALFEVFF*VKLIRR
Trigger: CCTTCTAATAAGTTTCACGCAGAAGAACACTTCAAA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTTTGAAGTGTTCTTCTaGGTGAAACTTATTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PAGSGSANAVLCQLPEESFEVFF*VKLIRR
Trigger: CCTTCTAATAAGTTTCACGCAGAAGAACACTTCAAA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTACACCTCAAAATAAGTTaGTCCTGGGCTAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILHLKIS*SWANKD
Trigger: GTCTTTATTAGCCCAGGAGCAACTTATTTTGAGGTG...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATATGTCTGCAGGGTTaGAGGACGTTTCTATATAAG +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILICLQG*RTFLYK
Trigger: CTTATATAGAAACGTCCTCCAACCCTGCAGACATAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGAGTCAGCTCTACCTCTaGAGTAGAACAGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKSQLYL*SRTAAS
Trigger: ACTAGCTGCTGTTCTACTCCAGAGGTAGAGCTGACT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTCATGGGAAAGCTGCTaGATGAACTGCAGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKSWESC*MNCRVL
Trigger: TAGGACTCTGCAGTTCATCCAGCAGCTTTCCCATGA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGGAGATGCTGAACCCTaGAAATGTTCTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKGDAEP*KCSSTT
Trigger: TGTGGTGGAAGAACATTTCCAGGGTTCAGCATCTCC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATCAAGAAGCATATTCTaGTGGGTTCATCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRSRSIF*WVHPNF
Trigger: AAAATTTGGATGAACCCACCAGAATATGCTTCTTGA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTGCACTGTTGTAACTTaGCATCTGCTTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKCTVVT*HLLHPT
Trigger: AGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGACAAATCTGATGCCTaGAGACAGGTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKDKSDA*RQVSTM
Trigger: CATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR TCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGATTCTGTGCAATACTaGATTATCCTCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEDSVQY*IILRTS
Trigger: TGAAGTCCTGAGGATAATTCAGTATTGCACAGAATC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGAAGCCACTTTCCTTTTaGTGCATCAGGTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKKPLSF*CIRSWE
Trigger: TTCCCATGACCTGATGCAGCAAAAGGAAAGTGGCTT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATGCTTGCCAGAAACTaGCCCACATATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: PVREQLWCVKKGKLKLILMLARN*PTYFSI
Trigger: TATTGAAAAATATGTGGGGCAGTTTCTGGCAAGCAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCACCTCAAAATAAGTTaGTCCTGGGCTAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFHLKIS*SWANKD
Trigger: GTCTTTATTAGCCCAGGAGCAACTTATTTTGAGGTG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGCCTGTTTTCTACATaGCTGTATGAATCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGLFST*LYESFE
Trigger: TTCAAAGGATTCATACAGGCATGTAGAAAACAGGCC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGCCCGAGGGATTCTGTaGAATACTGAATTATCCTCA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKARGIL*NTELSS
Trigger: TGAGGATAATTCAGTATTGCACAGAATCCCTCGGGC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTCGAGCAATAAACATGTaGATTTTCCTCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRAINM*IFLCFS
Trigger: AGAGAAGCAGAGGAAAATGCACATGTTTATTGCTCG...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGGAGAGATCTTCACCTaGCTTTTTCTTCTGCTTATA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFGEIFT*LFLLLI
Trigger: TATAAGCAGAAGAAAAAGGCAGGTGAAGATCTCTCC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGAGAGCTCATTACTTTaGCAATACTTCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEESSLL*QYFLLL
Trigger: TAGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGACCATCCCTTGTCCATaGCTCCACAAGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKTIPCP*LHKKIF
Trigger: GAAAATCTTCTTGTGGAGCCATGGACAAGGGATGGT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGCTGATCTGTGTAACTTaGAAGGCAGAGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKLICVT*KAESLP
Trigger: AGGAAGTGACTCTGCCTTCCAAGTTACACAGATCAG...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTTCCAATTCCAACTCTaGACAAATCTGATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEFQFQL*TNLMPE
Trigger: TTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAACTATATCTGTCTTTaGGGCCTGTTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMENYICL*GLFSTC
Trigger: GCATGTAGAAAACAGGCCCCAAAGACAGATATAGTT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTACACTGATGTTTTCTTaGGACATGTTCATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFTLMFS*DMFMRR
Trigger: TCTCCTCATGAACATGTCCCAAGAAAACATCAGTGT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTGTGATGCTGTGAGTTaGCAAATGGCCATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKCDAVS*QMAIGV
Trigger: TACTCCTATGGCCATTTGCCAACTCACAGCATCACA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAGAAGCATATTCTGGTaGGTTCATCCAAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKRSIFW*VHPNFQ
Trigger: TTGAAAATTTGGATGAACCCACCAGAATATGCTTCT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAAGATGATCACATTATaGGGTTCATTGGCATTATCC +
Preference number: 4 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEKMITL*GSLALS
Trigger: GGATAATGCCAATGAACCCCATAATGTGATCATCTT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR GCA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTCTTCAGACAACATCTaGTTCAAGATCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKSSDNI*FKISNP
Trigger: AGGGTTTGAGATCTTGAAGCAGATGTTGTCTGAAGA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CCA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTCAAGAAGCATATTCTaGTGGGTTCATCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFSRSIF*WVHPNF
Trigger: AAAATTTGGATGAACCCACCAGAATATGCTTCTTGA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CCGCGGCCCAGCCGCTCTTCCAGCCAGCGCAAGAGCGCGCCGTGGTaGCTCGACACCAGGGATTCGCAGGGAGGTGCGGGCCGCAACGCA +
Preference number: 5 (lower is better)
Translates to: PRPSRSSSQRKSAPW*LDTRDSQGGAGRNA
Trigger: TGCGTTGCGGCCCGCACCTCCCTGCGAATCCCTGGTGTCGAGGCACCACGGCGCGCTCTTGCGCTGGCTGGAAGAGCGGCTGGGCCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CGACACCAGGGATTCGCAGGGAGGTGCGGGCCGCAACGCAGCCGCTaGCTCTCGCAGCCGAGCGGGTTCCAGGAGTGCAGCGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: RHQGFAGRCGPQRSR*LSQPSGFQECSGGR
Trigger: CCTTCCGCCGCTGCACTCCTGGAACCCGCTCGGCTGCGAGAGGCAGCGGCTGCGTTGCGGCCCGCACCTCCCTGCGAATCCCTGGTGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TCACCGCGGCCCAGCCGCTCTTCCAGCCAGCGCAAGAGCGCGCCGTaGTGCCTCGACACCAGGGATTCGCAGGGAGGTGCGGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: SPRPSRSSSQRKSAP*CLDTRDSQGGAGRN
Trigger: GTTGCGGCCCGCACCTCCCTGCGAATCCCTGGTGTCGAGGCACCACGGCGCGCTCTTGCGCTGGCTGGAAGAGCGGCTGGGCCGCGGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCTCAGGGTGGCAGCATaGGTGCGGGCCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCLRVAA*VRAWGS
Trigger: GGACCCCCAGGCCCGCACCAATGCTGCCACCCTGAG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ATCCAGCGCCGCGAGCCTCCAGCAACTCCCGGAACTGCTCCAGGGTaGCGGACTCTTCACCGCGGCCCAGCCGCTCTTCCAGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: IQRREPPATPGTAPG*RTLHRGPAALPASA
Trigger: TGCGCTGGCTGGAAGAGCGGCTGGGCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCTGGAGGCTCGCGGCGCTGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TCGCCCGAACATCCAGCGCCGCGAGCCTCCAGCAACTCCCGGAACTaGTCCAGGGTGACGGACTCTTCACCGCGGCCCAGCCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPEHPAPRASSNSRN*SRVTDSSPRPSRSS
Trigger: GGAAGAGCGGCTGGGCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCTGGAGGCTCGCGGCGCTGGATGTTCGGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGAGGAGGGCAGCACTCTaGCTCCGGCGCTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLRRAAL*LRRCLA
Trigger: TGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCT...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CCCTGGTGGGCCTTCATCAGACAGTCCCCAACCAGCTGCATGCACTaGCTCCTCAGGGTGGCAGCATTGGTGCGGGCCTGGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PWWAFIRQSPTSCMH*LLRVAALVRAWGSS
Trigger: GCTGGACCCCCAGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp AGAGTCGGCAGCCCAATCTTGATGTGGGCTCCAGCCCTCACCCCCTaGGGCCGCCGCTTCGTCTTCGCTGCTGTTACTCGGAGCGTTCCC +
Preference number: 5 (lower is better)
Translates to: RVGSPILMWAPALTP*GRRFVFAAVTRSVP
Trigger: GGGAACGCTCCGAGTAACAGCAGCGAAGACGAAGCGGCGGCCGCAGGGGGTGAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CTTTGCCCTGGTGGGCCTTCATCAGACAGTCCCCAACCAGCTGCATaGACTGGCTCCTCAGGGTGGCAGCATTGGTGCGGGCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LCPGGPSSDSPQPAA*TGSSGWQHWCGPGG
Trigger: ACCCCCAGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACCAGGGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCTCCATGGCGAGCTCTTaGGCTGCAGCATCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSMASS*AAASVL
Trigger: GAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGGA...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp AGACCTTTGCCCTGGTGGGCCTTCATCAGACAGTCCCCAACCAGCTaGATGCACTGGCTCCTCAGGGTGGCAGCATTGGTGCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RPLPWWAFIRQSPTS*MHWLLRVAALVRAW
Trigger: CCAGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACCAGGGCAAAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp ACTGGCACATGCCCTGGCCACTCGGCCAGCAGGGAGGCGAGCACATaGCGAGCATATAGGACTGAGGTGGCCTCGTTCACACGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TGTCPGHSASREAST*RAYRTEVASFTRKR
Trigger: CCTCTTCCGTGTGAACGAGGCCACCTCAGTCCTATATGCTCGCCATGTGCTCGCCTCCCTGCTGGCCGAGTGGCCAGGGCATGTGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCGTTCCGCTTCTGCCCTaGCAGGCCGGAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLVPLLP*QAGGTH
Trigger: GTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAAC...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAGTTCCGCTTCTGCCCTaGCAGGCCGGAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPVPLLP*QAGGTH
Trigger: GTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAAC...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCTCAGGGTGGCAGCATaGGTGCGGGCCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLRVAA*VRAWGS
Trigger: GGACCCCCAGGCCCGCACCAATGCTGCCACCCTGAG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCAAGGAGGGCAGCACTCTaGCTCCGGCGCTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPRRAAL*LRRCLA
Trigger: TGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCT...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GCTTCTGCCCTTGCAGGCCGGAGGTACCCACTGATGCTTAAGCCTTaGACGCCCAACCGTTCAGCTGACTCCTGGCGGGTGCAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: ASALAGRRYPLMLKP*TPNRSADSWRVQRN
Trigger: GTTCCTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGCCTGCAAGGGCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGGGTGGCGTTCACAGCTaGATCAATAGTGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLGGVHS*INSGTS
Trigger: GCTGGTTCCACTATTGATCAAGCTGTGAACGCCACC...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCAGGAAGATGACCAGTaGACGAGCTGCCATGGAAAA +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCQEDDQ*TSCHGK
Trigger: TTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCTG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTCATCAGGGATGTTCTaGACCTCCTTCCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLSSGMF*TSFPSL
Trigger: CAAGGATGGGAAGGAGGTCAAGAACATCCCTGATGA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAACTCAGGGTGGCAGCATaGGTGCGGGCCTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMELRVAA*VRAWGS
Trigger: GGACCCCCAGGCCCGCACCAATGCTGCCACCCTGAG...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCGTTGGTGTGCTTCAGTaGGAATGGCAGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCVGVLQ*EWQLLD
Trigger: ATCAAGCAGCTGCCATTCCAACTGAAGCACACCAAC...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp GGATGCTTTGTTCCGCTTCTGCCCTTGCAGGCCGGAGGTACCCACTaGTGCTTAAGCCTTGCACGCCCAACCGTTCAGCTGACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GCFVPLLPLQAGGTH*CLSLARPTVQLTPG
Trigger: GCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GCTTGCTCTTGCAGTTCAGCTCCTTGTGCAGGAGGGCAGCACTCTTaGTCCGGCGCTGCTTGGCATAGCTCTGCTGTAGCTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: ACSCSSAPCAGGQHS*SGAAWHSSAVARSL
Trigger: CAGAGAGCGAGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCAAGAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TGTTCTGCAGAGCCTGTGCTGCACATCGGAGAAGGTGGTCCTCGGTaGTTAAGGCCAGCAGGTACTCCTGAAGCAGGCCAAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CSAEPVLHIGEGGPR*LRPAGTPEAGQAPG
Trigger: CCCAGGAGCTTGGCCTGCTTCAGGAGTACCTGCTGGCCTTAACCACCGAGGACCACCTTCTCCGATGTGCAGCACAGGCTCTGCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTGCCAAGGCCCTCCTTaGACTCTGAAAATATGTCGA +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLCQGPP*TLKICR
Trigger: TCGACATATTTTCAGAGTCAAAGGAGGGCCTTGGCA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCCACTTGGTTACTGACTaGAGCTTATCCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCHLVTD*SLSISG
Trigger: CCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGTG...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCACTTGGTTACTGACTaGAGCTTATCCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLHLVTD*SLSISG
Trigger: CCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGTG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGCTGCACTGTTGTAACTaGACATCTGCTTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLLHCCN*TSASSH
Trigger: GTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAG...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCTTGCAGTTCAGCTCCTaGTGCAGGAGGGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLLQFSS*CRRAAL
Trigger: GAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCAA...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TGTGAAGGTGGCAATGACATCTCGCCACAACGGGGCATTGTTGAGTaGCCGAAGGATCTCTGCCATGGAGCAGGCCCAGTCCAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: CEGGNDISPQRGIVE*PKDLCHGAGPVQAH
Trigger: GTGGGCCTGGACTGGGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CTGCAGGTCACTGGCACTCCTTCCCACAGCCACTGTCACCTGCTGTaGCATGTAGCTCTGGTCAGTGGCAGCCACTGCAATGGACAGATG +
Preference number: 5 (lower is better)
Translates to: LQVTGTPSHSHCHLL*HVALVSGSHCNGQM
Trigger: CATCTGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACATGCCACAGCAGGTGACAGTGGCTGTGGGAAGGAGTGCCAGTGACCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TCAGCTCCTTGTGCAGGAGGGCAGCACTCTTGCTCCGGCGCTGCTTaGCATAGCTCTGCTGTAGCTCGCTCTCTGTGCTGGAAATCAGCT +
Preference number: 5 (lower is better)
Translates to: SAPCAGGQHSCSGAA*HSSAVARSLCWKSA
Trigger: AGCTGATTTCCAGCACAGAGAGCGAGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCTGCACAAGGAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CCCACTCGGCTGTCCAGACAGACAGCTCCAAGGCTGAAGAGCAGGTaGGTGGTCTTCCAGCCATCTGGCACAACAGCATTGTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PTRLSRQTAPRLKSR*VVFQPSGTTALSAV
Trigger: CACAGCAGACAATGCTGTTGTGCCAGATGGCTGGAAGACCACCCACCTGCTCTTCAGCCTTGGAGCTGTCTGTCTGGACAGCCGAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGTCGGCAGCCCAATCTaGATGTGGGCTCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACVGSPI*MWAPAL
Trigger: GAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGAC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGTCGGCAGCCCAATCTaGATGTGGGCTCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAVGSPI*MWAPAL
Trigger: GAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGAC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGTTCCGCTTCTGCCCTaGCAGGCCGGAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESVPLLP*QAGGTH
Trigger: GTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAAC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAACGCCACAACGGGGCATaGTTGAGTGACCGAAGGATC +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQRHNGA*LSDRRI
Trigger: GATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCG...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGCAGAGTGAAGATGTaGGTGTGCTTCAGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCSRVKM*VCFSWN
Trigger: ATTCCAACTGAAGCACACCAACATCTTCACTCTGCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAGAGGTGCCACACTCTaGTCCTCCTCCCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKRGATL*SSSLLD
Trigger: GTCCAGAAGGGAGGAGGACAAGAGTGTGGCACCTCT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACAGACTCCTGCTGGGTaGCCACCTCTGGGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRQTPAG*PPLGQG
Trigger: TCCTTGGCCCAGAGGTGGCAACCCAGCAGGAGTCTG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGGAGGGCAGCACTCTaGCTCCGGCGCTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMERRAAL*LRRCLA
Trigger: TGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TGGGTGGATTCCTTGGTCCAGGTATGCAATACCACAGGCTGCTCCTaGTGCCAGGTCTCCACATCCAACTTGCTCAGGCCTCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: WVDSLVQVCNTTGCS*CQVSTSNLLRPPSG
Trigger: CCCTGAAGGAGGCCTGAGCAAGTTGGATGTGGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGAATCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GACACTTCTGCAACACAGGGGCCACTACTGGGTAGTAGCTTTGGCTaGATCTCTAAGGCAGGACTCCTGTCACCTGCAGCTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DTSATQGPLLGSSFG*ISKAGLLSPAAGVA
Trigger: AGCCACCCCAGCTGCAGGTGACAGGAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACCCAGTAGTGGCCCCTGTGTTGCAGAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGCTCCACTGGAGTTCTaGAGGGCCTCCAGCATATTC +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKAPLEF*RASSIF
Trigger: GAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAGC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCAGAGAGCTCATTACTTaGGCAATACTTCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCRELIT*AILPLA
Trigger: AGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTCT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGGGTGAGTGGGCCAGCTaGCTTCCAATTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKGEWAS*LPIPTL
Trigger: CAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACC...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTTTGAATACATTCTTTaGCCAGGCTCTCTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLFEYIL*PGSLGS
Trigger: TGAACCCAGAGAGCCTGGCAAAAGAATGTATTCAAA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGCTCTGGGTGGATGGTGCCTTCTCCTGATGGCAAGCCTAGGCAGCTCCCACTCCCAAGGAAGCAAGTCTaGCAGAGGTCCATGTCACTG +
Preference number: 5 (lower is better)
Translates to: SSGWMVPSPDGKPRQLPLPRKQV*QRSMSL
Trigger: CAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGG...GAGTGGGAGCTGCCTAGGCTTGCCATCAGGAGAAGGCACCATCCACCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCGCCACAACGGGGCATaGTTGAGTGACCGAAGGATC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWRHNGA*LSDRRI
Trigger: GATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGACAGACTCCTGCTGGGTaGCCACCTCTGGGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRQTPAG*PPLGQG
Trigger: TCCTTGGCCCAGAGGTGGCAACCCAGCAGGAGTCTG...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTTGCAGTTCAGCTCCTaGTGCAGGAGGGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLQFSS*CRRAAL
Trigger: GAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCAA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAATAGCCCGCTTGCTCTaGCAGTTCAGCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQIARLL*QFSSLC
Trigger: GCACAAGGAGCTGAACTGCAAGAGCAAGCGGGCTAT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TCCTCAGTGTTGCATTGCACCTCCATTCCTGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATGGTGCCCAGCATGTTCTCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSVLHCTSIPGSSMN*QAAKAMVPSMFSRQ
Trigger: CTGCCGAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAATGCAACACTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069395.7
CDS GCA 90 bp GCAATACCACAGGCTGCTCCTGCTGCCAGGTCTCCACATCCAACTTaGTCAGGCCTCCTTCAGGGTCACTGCACAGCTTCTTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: AIPQAAPAARSPHPT*SGLLQGHCTASSTA
Trigger: AGCTGTTGAAGAAGCTGTGCAGTGACCCTGAAGGAGGCCTGAGCAAGTTGGATGTGGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GTGGATTCCTTGGTCCAGGTATGCAATACCACAGGCTGCTCCTGCTaGCAGGTCTCCACATCCAACTTGCTCAGGCCTCCTTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: VDSLVQVCNTTGCSC*QVSTSNLLRPPSGS
Trigger: TGACCCTGAAGGAGGCCTGAGCAAGTTGGATGTGGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CGTCTCCATGGCCCTCGGGCTTCACTCCACCAAGGAAGCAAGTCTTaGAGAGGTCCATGTCACTGCACTGTAGACATCGGTATCGATGCC +
Preference number: 5 (lower is better)
Translates to: RLHGPRASLHQGSKS*RGPCHCTVDIGIDA
Trigger: GGCATCGATACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTGGAGTGAAGCCCGAGGGCCATGGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GACCGGTTTGGCGGCAGGCCACACCCACCAGCCATTCCCAGATCTTaGCCAATGCGAGGTGAGGTACAACCCTTTCTTCAGACAACATCT +
Preference number: 5 (lower is better)
Translates to: DRFGGRPHPPAIPRS*PMRGEVQPFLQTTS
Trigger: AGATGTTGTCTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGGTGTGGCCTGCCGCCAAACCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TTCATTCAGGTGGCCTGCGTTGGAGATGACCACCTGAAACATGAGTaGGAGGACGTGCTCCAGATCTATCAGGGGGACTGTGGGACCCGA +
Preference number: 5 (lower is better)
Translates to: FIQVACVGDDHLKHE*EDVLQIYQGDCGTR
Trigger: TCGGGTCCCACAGTCCCCCTGATAGATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAACGCAGGCCACCTGAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CAGGCAGCCAAGGCCATGGTGCCCAGCATGTTCTCTCGGCAGCCCTaGAGTACTTTCTGTAGGATCTTCTCCCACTGGTGCTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: QAAKAMVPSMFSRQP*STFCRIFSHWCFSS
Trigger: GGAAGAAAAGCACCAGTGGGAGAAGATCCTACAGAAAGTACTCCAGGGCTGCCGAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GACAGCTCCAAGGCTGAAGAGCAGGTGGGTGGTCTTCCAGCCATCTaGCACAACAGCATTGTCTGCTGTGGCAAACAGGTTGTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: DSSKAEEQVGGLPAI*HNSIVCCGKQVVLG
Trigger: GCCAAGCACAACCTGTTTGCCACAGCAGACAATGCTGTTGTGCCAGATGGCTGGAAGACCACCCACCTGCTCTTCAGCCTTGGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGCTCCACTGGAGTTCTaGAGGGCCTCCAGCATATTC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWAPLEF*RASSIF
Trigger: GAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAGC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTGGGCTGCAGGTGGCCAGGTCAGGAGGGACCCTGTCCGGTCAGAGAGCAGCTGTGTCACAGTTTTCTTTaGAACTTTTGCTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: VGCRWPGQEGPCPVREQLCHSFL*NFCSWA
Trigger: TGCCCATGAGCAAAAGTTCAAAAGAAAACTGTGACA...CAGCTGCTCTCTGACCGGACAGGGTCCCTCCTGACCTGGCCACCTGCAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATGGAATGGCAGCTGCTaGATGCAGTGGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQWNGSC*MQWSVK
Trigger: CTTCACAGACCACTGCATCAAGCAGCTGCCATTCCA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTCCCGGATAGCCCGCTaGCTCTTGCAGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLSRIAR*LLQFSS
Trigger: GGAGCTGAACTGCAAGAGCAAGCGGGCTATCCGGGA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp GATCCTGGAGAGAGGGACAGCGGTGGCATGTGCTGCAGTGCCTTCTaGGTATTGTGCAGCACTGTCTGGACAAAGGCAGGATTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DPGERDSGGMCCSAF*VLCSTVWTKAGFVS
Trigger: GGAGACAAATCCTGCCTTTGTCCAGACAGTGCTGCACAATACTCAGAAGGCACTGCAGCACATGCCACCGCTGTCCCTCTCTCCAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TTGCCTGGGATACTGCCATGTTACTGCCTAACTGATGCACTGACTTaGGTGCCATGCACTGGGAAGCAAGGCGCCCCATCAGTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: LPGILPCYCLTDALT*VPCTGKQGAPSVGR
Trigger: TCTCCCGACTGATGGGGCGCCTTGCTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGTTAGGCAGTAACATGGCAGTATCCCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TTAGATTCCCTCACTTGCACCTCCATTCCTGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATGGTGCCCAGCATGTTCTCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LDSLTCTSIPGSSMN*QAAKAMVPSMFSRQ
Trigger: CTGCCGAGAGAACATGCTGGGCACCATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TGCTCCGGCGCTGCTTGGCATAGCTCTGCTGTAGCTCGCTCTCTGTaGTGGAAATCAGCTTCTGGGTCACAGGATTTGATTCAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CSGAAWHSSAVARSL*WKSASGSQDLIQEW
Trigger: CCACTCCTGAATCAAATCCTGTGACCCAGAAGCTGATTTCCAGCACAGAGAGCGAGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp AGGGCTCTTCAGCTGTGGACACTTCTGCAACACAGGGGCCACTACTaGGTAGTAGCTTTGGCTGGATCTCTAAGGCAGGACTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RALQLWTLLQHRGHY*VVALAGSLRQDSCH
Trigger: GTGACAGGAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACCCAGTAGTGGCCCCTGTGTTGCAGAAGTGTCCACAGCTGAAGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CATGACATCCTTCAGCACCGGGTATTTCTCCTTGACTGTGGGGACTaGCCTGGTCTCTTCCATGGATCTGAAAGAGAGCAGCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: HDILQHRVFLLDCGD*PGLFHGSEREQPES
Trigger: CGACTCCGGCTGCTCTCTTTCAGATCCATGGAAGAGACCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGGTGCTGAAGGATGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TGGGACCTCCTGCCCCGGCTGGGGTCAGGAGACATTGGCCTGGCTCAGCAGTGCATGATGTTTCTCCATTaGTCATCCTGTATATGTCTG +
Preference number: 5 (lower is better)
Translates to: WDLLPRLGSGDIGLAQQCMMFLH*SSCICL
Trigger: CAGACATATACAGGATGACAAATGGAGAAACATCAT...GCACTGCTGAGCCAGGCCAATGTCTCCTGACCCCAGCCGGGGCAGGAGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCATCTGATCTGTGTAACTaGGAAGGCAGAGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPSDLCN*EGRVTS
Trigger: GGAAGTGACTCTGCCTTCCAAGTTACACAGATCAGA...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGGACTGAAGTCAGTTTaGCCTGGGATACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQGLKSV*PGILPC
Trigger: ACATGGCAGTATCCCAGGCAAAACTGACTTCAGTCC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGGTGAGTGGGCCAGCTaGCTTCCAATTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACGEWAS*LPIPTL
Trigger: CAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCCTTCCACCACAGAGCTaGTCCTCTGGCGTCTATCAA +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTLPPQS*SSGVYQ
Trigger: TTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAG...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCCAAGGAAGCAAGTCTaGCAGAGGTCCATGTCACTG +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWPRKQV*QRSMSL
Trigger: CAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGACGCCACAACGGGGCATaGTTGAGTGACCGAAGGATC +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRRHNGA*LSDRRI
Trigger: GATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCG...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTGGAATGGCAGCTGCTaGATGCAGTGGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTWNGSC*MQWSVK
Trigger: CTTCACAGACCACTGCATCAAGCAGCTGCCATTCCA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGAGGTGCCACACTCTaGTCCTCCTCCCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRGATL*SSSLLD
Trigger: GTCCAGAAGGGAGGAGGACAAGAGTGTGGCACCTCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAGAGGTGCCACACTCTaGTCCTCCTCCCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMERGATL*SSSLLD
Trigger: GTCCAGAAGGGAGGAGGACAAGAGTGTGGCACCTCT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCATAGCCCGCTTGCTCTaGCAGTTCAGCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACIARLL*QFSSLC
Trigger: GCACAAGGAGCTGAACTGCAAGAGCAAGCGGGCTAT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATCCCGGATAGCCCGCTaGCTCTTGCAGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSRIAR*LLQFSS
Trigger: GGAGCTGAACTGCAAGAGCAAGCGGGCTATCCGGGA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp AGAGAGCAGGCTTGCAGTTGTCTGATGACATGGCTCAGCTCCCCCTaGAGATTGGCTCCACTGGAGTTCTTGAGGGCCTCCAGCATATTC +
Preference number: 5 (lower is better)
Translates to: REQACSCLMTWLSSP*RLAPLEFLRASSIF
Trigger: GAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAGCCAATCTTCAGGGGGAGCTGAGCCATGTCATCAGACAACTGCAAGCCTGCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp ACCTGGGGGAAGCCGACAAGCACCAGCAGAGTGAAGATGTTGGTGTaGTTCAGTTGGAATGGCAGCTGCTTGATGCAGTGGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: TWGKPTSTSRVKMLV*FSWNGSCLMQWSVK
Trigger: CTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTCGGCTTCCCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TTGGCGGCAGGCCACACCCACCAGCCATTCCCAGATCTTGCCCAATaGGAGGTGAGGTACAACCCTTTCTTCAGACAACATCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LAAGHTHQPFPDLAQ*EVRYNPFFRQHLLQ
Trigger: TTGAAGCAGATGTTGTCTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGGTGTGGCCTGCCGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CCACTGATGCTTAAGCCTTGCACGCCCAACCGTTCAGCTGACTCCTaGCGGGTGCAGAGGAACTTCACCATCAAGAATTTGGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: PLMLKPCTPNRSADS*RVQRNFTIKNLATL
Trigger: CAGAGTTGCCAAATTCTTGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCATCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TGCTTGCGTTCGTGCTCAGTGACACTCTTCATCATGGTGAAGAGCTaGCTTCTCCGGGTCTGTCGATCAGGAAAGAAGATGGCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: CLRSCSVTLFIMVKS*LLRVCRSGKKMAAP
Trigger: TGGGGCTGCCATCTTCTTTCCTGATCGACAGACCCGGAGAAGCCAGCTCTTCACCATGATGAAGAGTGTCACTGAGCACGAACGCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TCACCTGCAGCTGGGGTGGCTGCTTCTGTAGGAGATGCTGAACCCTaGAAATGTTCTTCCACCACAGAGCTTGTCCTCTGGCGTCTATCA +
Preference number: 5 (lower is better)
Translates to: SPAAGVAASVGDAEP*KCSSTTELVLWRLS
Trigger: TGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAGAACATTTCCAGGGTTCAGCATCTCCTACAGAAGCAGCCACCCCAGCTGCAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TCTGCTTCGCCAGGGCTACTAACTGGCCGGTCCAGTTCTTCTTCTTaGTCTCCTCGTTCATCTAGCTCCAGGTCTCCATGTTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SASPGLLTGRSSSSS*SPRSSSSRSPCSAR
Trigger: TCTGGCTGAACATGGAGACCTGGAGCTAGATGAACGAGGAGACCAAGAAGAAGAACTGGACCGGCCAGTTAGTAGCCCTGGCGAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGTCGGCAGCCCAATCTaGATGTGGGCTCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEVGSPI*MWAPAL
Trigger: GAGGGCTGGAGCCCACATCAAGATTGGGCTGCCGAC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAGGAAGCGCAATATCATaGATGAGTGAATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQGSAIS*MSECQG
Trigger: GCCTTGGCATTCACTCATCAATGATATTGCGCTTCC...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGATGCTAGAGATCCGATaGCGATGCAGGAAGCGCAAT +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWMLEIR*RCRKRN
Trigger: ATTGCGCTTCCTGCATCGCAATCGGATCTCTAGCAT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCATGCTAGAGATCCGATaGCGATGCAGGAAGCGCAAT +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTMLEIR*RCRKRN
Trigger: ATTGCGCTTCCTGCATCGCAATCGGATCTCTAGCAT...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTCTGATCTGTGTAACTaGGAAGGCAGAGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKSDLCN*EGRVTS
Trigger: GGAAGTGACTCTGCCTTCCAAGTTACACAGATCAGA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATCCATGGCGAGCTCTTaGGCTGCAGCATCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSMASS*AAASVL
Trigger: GAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGGA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTCCATGGCGAGCTCTTaGGCTGCAGCATCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSMASS*AAASVL
Trigger: GAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGGA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAGGTGAGTGGGCCAGCTaGCTTCCAATTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMEGEWAS*LPIPTL
Trigger: CAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACC...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGACTTCCACCACAGAGCTaGTCCTCTGGCGTCTATCAA +
Preference number: 5 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRLPPQS*SSGVYQ
Trigger: TTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAG...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGTTGGTGTGCTTCAGTaGGAATGGCAGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTVGVLQ*EWQLLD
Trigger: ATCAAGCAGCTGCCATTCCAACTGAAGCACACCAAC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATCCCGGATAGCCCGCTaGCTCTTGCAGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSRIAR*LLQFSS
Trigger: GGAGCTGAACTGCAAGAGCAAGCGGGCTATCCGGGA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGATCTTTCCACTTCTGTaGCGACCCGCTGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWIFPLL*RPAEVV
Trigger: CACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGAT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ACTGAAGTCAGTTTTGCCTGGGATACTGCCATGTTACTGCCTAACTaGTGCACTGACTTGAGTGCCATGCACTGGGAAGCAAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: TEVSFAWDTAMLLPN*CTDLSAMHWEARRP
Trigger: GGGGCGCCTTGCTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGTTAGGCAGTAACATGGCAGTATCCCAGGCAAAACTGACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TCTTTCCACTTCTGTTGCGACCCGCTGAAGTTGTGCCGGTCCTGCTaGAAGTCACTACTGCTGGACATGGCTAGTTCATCACAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SFHFCCDPLKLCRSC*KSLLLDMASSSQPS
Trigger: GGAAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TGCTTAAGCCTTGCACGCCCAACCGTTCAGCTGACTCCTGGCGGGTaGAGAGGAACTTCACCATCAAGAATTTGGCAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: CLSLARPTVQLTPGG*RGTSPSRIWQLCTV
Trigger: AACAGTGCAGAGTTGCCAAATTCTTGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GCTGCCTTGCACAGACCAGAACAGGGAGAAGAGTACAGAACCAACTaGCCCATGGGACCGATTGAGCATCAACAATTCACACTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: AALHRPEQGEEYRTN*PMGPIEHQQFTLSS
Trigger: GCTCGAGAGTGTGAATTGTTGATGCTCAATCGGTCCCATGGGGCAGTTGGTTCTGTACTCTTCTCCCTGTTCTGGTCTGTGCAAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GCTTCACTCCACCAAGGAAGCAAGTCTTGCAGAGGTCCATGTCACTaGACTGTAGACATCGGTATCGATGCCAGGGGGCAATCTCATCAC +
Preference number: 5 (lower is better)
Translates to: ASLHQGSKSCRGPCH*TVDIGIDARGQSHH
Trigger: GTGATGAGATTGCCCCCTGGCATCGATACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTGGAGTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGTGGCAATACTTCCTCTaGCTAGTGCAAAAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKWQYFL*LVQKPE
Trigger: TTCTGGCTTTTGCACTAGCAAGAGGAAGTATTGCCA...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCTGCACTGTTGTAACTaGACATCTGCTTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWLHCCN*TSASSH
Trigger: GTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGCCCCATGGGACCGATaGAGCATCAACAATTCACAC +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALAPWDR*SINNSH
Trigger: GTGTGAATTGTTGATGCTCAATCGGTCCCATGGGGC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GGGCACTGCCTGCACTGCAGGTGCTGGAGAGCCCCTCCATTTCTGTCACTTCCACAACTATATCTGTCTTaGGGGCCTGTTTTCTACATG +
Preference number: 5 (lower is better)
Translates to: GHCLHCRCWRAPPFLSLPQLYLS*GPVFYM
Trigger: CATGTAGAAAACAGGCCCCAAAGACAGATATAGTTG...TGGAAGTGACAGAAATGGAGGGGCTCTCCAGCACCTGCAGTGCAGGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGGTGGCGTTCACAGCTaGATCAATAGTGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALGGVHS*INSGTS
Trigger: GCTGGTTCCACTATTGATCAAGCTGTGAACGCCACC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCTTCCACCACAGAGCTaGTCCTCTGGCGTCTATCAA +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESLPPQS*SSGVYQ
Trigger: TTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGCCAAGGAAGCAAGTCTaGCAGAGGTCCATGTCACTG +
Preference number: 5 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLPRKQV*QRSMSL
Trigger: CAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGG...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAAACACTCTGCAAACACTaGCTCAGGGTTTGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQTLCKH*LRVWSN
Trigger: ATTACTCCAAACCCTGAGCAAGTGTTTGCAGAGTGT...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGCTATCCATGCTGGTTaGCAGAAGGTGACTAGCAAT +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWAIHAG*QKVTSN
Trigger: ATTGCTAGTCACCTTCTGCAAACCAGCATGGATAGC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAATCTTTCCACTTCTGTaGCGACCCGCTGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAIFPLL*RPAEVV
Trigger: CACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGAT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCGCAAACAGGTTGTGCTaGGCTGAAAGGACCTTCATG +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACANRLC*AERTFM
Trigger: CATGAAGGTCCTTTCAGCCAAGCACAACCTGTTTGC...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS TCA 90 bp TCAACAATTCACACTCTCGAGCAGCAACAGAGAGGAGGGTGTTCATaGCAGCCAGGACTTCACTGGTGTTCATGGTGGCCAGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: STIHTLEQQQRGGCS*QPGLHWCSWWPGHS
Trigger: AGAGTGACCTGGCCACCATGAACACCAGTGAAGTCCTGGCTGTCATGAACACCCTCCTCTCTGTTGCTGCTCGAGAGTGTGAATTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp AGAACAGGGAGAAGAGTACAGAACCAACTGCCCCATGGGACCGATTaGGCATCAACAATTCACACTCTCGAGCAGCAACAGAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RTGRRVQNQLPHGTD*ASTIHTLEQQQRGG
Trigger: CCCTCCTCTCTGTTGCTGCTCGAGAGTGTGAATTGTTGATGCTCAATCGGTCCCATGGGGCAGTTGGTTCTGTACTCTTCTCCCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp CTCAGGGTTTGGAGTAATCGCCTTCTCTTCTACCAGTACCTGAGCTaGCACTTCTGGATGTTCAGCATCTGGAAGTCCTGGAGGCACGTG +
Preference number: 5 (lower is better)
Translates to: LRVWSNRLLFYQYLS*HFWMFSIWKSWRHV
Trigger: CACGTGCCTCCAGGACTTCCAGATGCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGAGAAGGCGATTACTCCAAACCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp CAGGCCACACCCACCAGCCATTCCCAGATCTTGCCCAATGCGAGGTaGGGTACAACCCTTTCTTCAGACAACATCTGCTTCAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: QATPTSHSQILPNAR*GTTLSSDNICFKIS
Trigger: TGAGATCTTGAAGCAGATGTTGTCTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGGTGTGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CACTGTCACCTGCTGTGGCATGTAGCTCTGGTCAGTGGCAGCCACTaGAATGGACAGATGCCTAAGCACAACATCTGGCTTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: HCHLLWHVALVSGSH*NGQMPKHNIWLHLQ
Trigger: TTGAAGATGAAGCCAGATGTTGTGCTTAGGCATCTGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACATGCCACAGCAGGTGACAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GTTCTTGACCTCCTTCCCATCCTTGTGTGGGTGAGTGGGCCAGCTTaGTTCCAATTCCAACTCTGGACAAATCTGATGCCTGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: VLDLLPILVWVSGPA*FQFQLWTNLMPEDR
Trigger: CCTGTCTTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACCCACACAAGGATGGGAAGGAGGTCAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp ACCAGCAGAGTGAAGATGTTGGTGTGCTTCAGTTGGAATGGCAGCTaGTTGATGCAGTGGTCTGTGAAGGTGGCAATGACATCTCGCCAC +
Preference number: 5 (lower is better)
Translates to: TSRVKMLVCFSWNGS*LMQWSVKVAMTSRH
Trigger: GTGGCGAGATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp AAGATGTTGGTGTGCTTCAGTTGGAATGGCAGCTGCTTGATGCAGTaGTCTGTGAAGGTGGCAATGACATCTCGCCACAACGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: KMLVCFSWNGSCLMQ*SVKVAMTSRHNGAL
Trigger: CAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp AAGCCGACAAGCACCAGCAGAGTGAAGATGTTGGTGTGCTTCAGTTaGAATGGCAGCTGCTTGATGCAGTGGTCTGTGAAGGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: KPTSTSRVKMLVCFS*NGSCLMQWSVKVAM
Trigger: CATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTCGGCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CTGGAAATCAGCTTCTGGGTCACAGGATTTGATTCAGGAGTGGCTTaGTCAGAGCGTGCAGGCCGGGACAAGCATGGCAAGATAATCATG +
Preference number: 5 (lower is better)
Translates to: LEISFWVTGFDSGVA*SERAGRDKHGKIIM
Trigger: CATGATTATCTTGCCATGCTTGTCCCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGAAGCTGATTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GTTGTTATAGGGATGTTTAGATTCCCTCACTTGCACCTCCATTCCTaGTTCCTCCATGAACTGACAGGCAGCCAAGGCCATGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VVIGMFRFPHLHLHS*FLHELTGSQGHGAQ
Trigger: CTGGGCACCATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAAACATCCCTATAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTGCCAAGGCCCTCCTTaGACTCTGAAAATATGTCGA +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACCQGPP*TLKICR
Trigger: TCGACATATTTTCAGAGTCAAAGGAGGGCCTTGGCA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGAGACCAATACCATATaGCAGAGGCATCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAETNTI*QRHQRQ
Trigger: CTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGTGGCAATACTTCCTCTaGCTAGTGCAAAAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWWQYFL*LVQKPE
Trigger: TTCTGGCTTTTGCACTAGCAAGAGGAAGTATTGCCA...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCAAATCACTCTCATGCTaGCCAGAAACTGCCCCACAT +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACKSLSC*PETAPH
Trigger: ATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATTT...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGACAGGAAGATGACCAGTaGACGAGCTGCCATGGAAAA +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRQEDDQ*TSCHGK
Trigger: TTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCTG...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGGACTGAAGTCAGTTTaGCCTGGGATACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRGLKSV*PGILPC
Trigger: ACATGGCAGTATCCCAGGCAAAACTGACTTCAGTCC...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGACTGAAGTCAGTTTaGCCTGGGATACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGLKSV*PGILPC
Trigger: ACATGGCAGTATCCCAGGCAAAACTGACTTCAGTCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTAAGTATGCTCTGCCCTaGGGCTTTCCGCAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESKYALP*GFPQRK
Trigger: CTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGAAGTATGCTCTGCCCTaGGGCTTTCCGCAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLKYALP*GFPQRK
Trigger: CTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTT...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAAGTATGCTCTGCCCTaGGGCTTTCCGCAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALKYALP*GFPQRK
Trigger: CTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AGTCCACGGCCTGCTGCTGACCCAGCATCCTACTCTGTGGCTCTGGGGAAAAAGAAGTCATCACATACATaGCAATTCATTCTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: SPRPAADPASYSVALGKKKSSHT*QFILRP
Trigger: AGGCCGGAGAATGAATTGCAATGTATGTGATGACTT...CTTTTTCCCCAGAGCCACAGAGTAGGATGCTGGGTCAGCAGCAGGCCGTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTGCTCCCAGGGACACCTGCTCTCACTGTGAGTTGGCCAGCTAAGCTGTGGCAATTCCTTTTCCTTGTTTaGACGTCGACAATCACAGCT +
Preference number: 5 (lower is better)
Translates to: LLPGTPALTVSWPAKLWQFLFLV*TSTITA
Trigger: AGCTGTGATTGTCGACGTCAAAACAAGGAAAAGGAA...TTGCCACAGCTTAGCTGGCCAACTCACAGTGAGAGCAGGTGTCCCTGGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCTGGGTCACAGGATTaGATTCAGGAGTGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESSGSQD*IQEWLG
Trigger: ACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGA...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TCTGGAGTGCGATACACCAGAGCGGCAAAGGTGGCGTTCACAGCTTaGTCAATAGTGGAACCAGCAACTATATCTGTCTTTGGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SGVRYTRAAKVAFTA*SIVEPATISVFGAC
Trigger: ACAGGCCCCAAAGACAGATATAGTTGCTGGTTCCACTATTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGGTGTATCGCACTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp AAACCCTGGCAGTGGTCACACGTAAACTCCATGTTAACCATTTCATaGTCGTCTCCATGGCCCTCGGGCTTCACTCCACCAAGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: KPWQWSHVNSMLTIS*SSPWPSGFTPPRKQ
Trigger: TTGCTTCCTTGGTGGAGTGAAGCCCGAGGGCCATGGAGACGATCATGAAATGGTTAACATGGAGTTTACGTGTGACCACTGCCAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ACTTGCTCAGGGTTTGGAGTAATCGCCTTCTCTTCTACCAGTACCTaGGCTGACACTTCTGGATGTTCAGCATCTGGAAGTCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: TCSGFGVIAFSSTST*ADTSGCSASGSPGG
Trigger: GCCTCCAGGACTTCCAGATGCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGAGAAGGCGATTACTCCAAACCCTGAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TATCTCCTGGAAGCTCAAAATCTTTCCACTTCTGTTGCGACCCGCTaGAGTTGTGCCGGTCCTGCTGAAAGTCACTACTGCTGGACATGG +
Preference number: 5 (lower is better)
Translates to: YLLEAQNLSTSVATR*SCAGPAESHYCWTW
Trigger: CCATGTCCAGCAGTAGTGACTTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGATTTTGAGCTTCCAGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TGGCACAACAGCATTGTCTGCTGTGGCAAACAGGTTGTGCTTGGCTaGAAGGACCTTCATGACTGCAGCATCTACTTCTGCTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WHNSIVCCGKQVVLG*KDLHDCSIYFCWLK
Trigger: CTTCAGCCAGCAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTGTTTGCCACAGCAGACAATGCTGTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS GCA 90 bp GTCTTGCAGAGGTCCATGTCACTGCACTGTAGACATCGGTATCGATaGCAGGGGGCAATCTCATCACACCCATCACAAGAGATATCCACA +
Preference number: 5 (lower is better)
Translates to: VLQRSMSLHCRHRYR*QGAISSHPSQEIST
Trigger: TGTGGATATCTCTTGTGATGGGTGTGATGAGATTGCCCCCTGGCATCGATACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GACAAGCACCAGCAGAGTGAAGATGTTGGTGTGCTTCAGTTGGAATaGCAGCTGCTTGATGCAGTGGTCTGTGAAGGTGGCAATGACATC +
Preference number: 5 (lower is better)
Translates to: DKHQQSEDVGVLQLE*QLLDAVVCEGGNDI
Trigger: GATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGGAAGCGCAATATCATaGATGAGTGAATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESGSAIS*MSECQG
Trigger: GCCTTGGCATTCACTCATCAATGATATTGCGCTTCC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCTTCTTTTTGTACCAGTaGATCCAGAGACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTFFLYQ*IQRLLQ
Trigger: CTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGAA...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTCACTTGGTTACTGACTaGAGCTTATCCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESHLVTD*SLSISG
Trigger: CCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGTG...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGAGACCAATACCATATaGCAGAGGCATCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESETNTI*QRHQRQ
Trigger: CTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATGGCAATACTTCCTCTaGCTAGTGCAAAAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAWQYFL*LVQKPE
Trigger: TTCTGGCTTTTGCACTAGCAAGAGGAAGTATTGCCA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAAATCACTCTCATGCTaGCCAGAAACTGCCCCACAT +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALKSLSC*PETAPH
Trigger: ATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATTT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAATCATCAGGGATGTTCTaGACCTCCTTCCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSSGMF*TSFPSL
Trigger: CAAGGATGGGAAGGAGGTCAAGAACATCCCTGATGA...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTCATCAGGGATGTTCTaGACCTCCTTCCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSSGMF*TSFPSL
Trigger: CAAGGATGGGAAGGAGGTCAAGAACATCCCTGATGA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGAAGTCATCACATACATaGCAATTCATTCTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWKSSHT*QFILRP
Trigger: AGGCCGGAGAATGAATTGCAATGTATGTGATGACTT...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGCATAGGAGTATTTCTTaGCTGTGTAGCATCCATAGC +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWHRSIS*LCSIHS
Trigger: GCTATGGATGCTACACAGCAAAGAAATACTCCTATG...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGGCTATCCATGCTGGTTaGCAGAAGGTGACTAGCAAT +
Preference number: 5 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLAIHAG*QKVTSN
Trigger: ATTGCTAGTCACCTTCTGCAAACCAGCATGGATAGC...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGGCTATCCATGCTGGTTaGCAGAAGGTGACTAGCAAT +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALAIHAG*QKVTSN
Trigger: ATTGCTAGTCACCTTCTGCAAACCAGCATGGATAGC...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GACCCCTTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTTTTATATAAACCTTaGAGAGCCAGGGACAGGACC +
Preference number: 5 (lower is better)
Translates to: DPLCLPVLSPSRQSCLLRVLYKP*RARDRT
Trigger: GGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAAC...TCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTATAGCCCGCTTGCTCTaGCAGTTCAGCTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFIARLL*QFSSLC
Trigger: GCACAAGGAGCTGAACTGCAAGAGCAAGCGGGCTAT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATTTAGATTCCCTCACTaGCACCTCCATTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRFRFPH*HLHSWF
Trigger: GAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAAA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ACAAAGAAGGCAAGATCACTGGGTTCCCAGCCCATATCCAAAAGATaGAGCAGGGCTGTCTGGACACAAGATAAAGCAGGGAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: TKKARSLGSQPISKR*SRAVWTQDKAGSRD
Trigger: GTCTCTGCTCCCTGCTTTATCTTGTGTCCAGACAGCCCTGCTTCATCTTTTGGATATGGGCTGGGAACCCAGTGATCTTGCCTTCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp GGGTCTCTTCAAAACCATGAGCCTTTAGTGTTTTATATAAACCTTTaGGAGCCAGGGACAGGACCCAGGTTGCTTCCACTGCCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: GSLQNHEPLVFYINL*EPGTGPRLLPLPRD
Trigger: GTCCCGAGGCAGTGGAAGCAACCTGGGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAACACTAAAGGCTCATGGTTTTGAAGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GTATATACGGTGGGTGGAAGCAGTGAGGCTGCCCGAGGGATTCTGTaGAATACTGAATTATCCTCAGGACTTCAAGTATGCTCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VYTVGGSSEAARGIL*NTELSSGLQVCSAL
Trigger: AAGGGCAGAGCATACTTGAAGTCCTGAGGATAATTCAGTATTGCACAGAATCCCTCGGGCAGCCTCACTGCTTCCACCCACCGTATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TTCAACAGCTCTGTGAGGGTGCTGAACTCTCTTAGGAGTGTGCAGTaGGACACGTCTAAAGTGCAGAAGTCTAGCAGGAAGATGACCAGT +
Preference number: 5 (lower is better)
Translates to: FNSSVRVLNSLRSVQ*DTSKVQKSSRKMTS
Trigger: ACTGGTCATCTTCCTGCTAGACTTCTGCACTTTAGACGTGTCCCACTGCACACTCCTAAGAGAGTTCAGCACCCTCACAGAGCTGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp CAGACACTTCATGGCAGTTATTTTCATAGTTGTGGGTGGATTCCTTaGTCCAGGTATGCAATACCACAGGCTGCTCCTGCTGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: QTLHGSYFHSCGWIP*SRYAIPQAAPAARS
Trigger: AGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGAATCCACCCACAACTATGAAAATAACTGCCATGAAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGAACAAGAGAGCAGGCTaGCAGTTGTCTGATGACATG +
Preference number: 5 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKNKRAG*QLSDDM
Trigger: CATGTCATCAGACAACTGCAAGCCTGCTCTCTTGTT...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAACAAGAGAGCAGGCTaGCAGTTGTCTGATGACATG +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKNKRAG*QLSDDM
Trigger: CATGTCATCAGACAACTGCAAGCCTGCTCTCTTGTT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTTCTTTTTGTACCAGTaGATCCAGAGACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACFFLYQ*IQRLLQ
Trigger: CTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGAA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTTTTGGACATGTGGCGCCTGCAGTGGGCCTTTTTGATGAGGCGGCTGCTTGGGCTTTCCTTTTCTTTTaGTACCAGTTGATCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LFGHVAPAVGLFDEAAAWAFLFF*YQLIQR
Trigger: TCTCTGGATCAACTGGTACAAAAAGAAAAGGAAAGC...CCAAGCAGCCGCCTCATCAAAAAGGCCCACTGCAGGCGCCACATGTCCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GTCCAATACCATGGGACCTGGACCAAGTTCCCTCTGATGTCAGGGTGGTGGACCGCTTTCCTTTTCTTTTaGTACCAGTTGATCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VQYHGTWTKFPLMSGWWTAFLFF*YQLIQR
Trigger: TCTCTGGATCAACTGGTACAAAAAGAAAAGGAAAGC...GGTCCACCACCCTGACATCAGAGGGAACTTGGTCCAGGTCCCATGGTATTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGAGACCAATACCATATaGCAGAGGCATCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKETNTI*QRHQRQ
Trigger: CTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTC...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTATGCCTGCCAGTTTTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGTCTGATCTGTGTAACTaGGAAGGCAGAGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: LCLPVLSPSRQSCLLRVKSDLCN*EGRVTS
Trigger: GGAAGTGACTCTGCCTTCCAAGTTACACAGATCAGA...CTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAAAACTGGCAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCATTCACCATCAAGAATTaGGCAACTCTGCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAFTIKN*ATLHCC
Trigger: ACAACAGTGCAGAGTTGCCAAATTCTTGATGGTGAA...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAAATCACTCTCATGCTaGCCAGAAACTGCCCCACAT +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKKSLSC*PETAPH
Trigger: ATGTGGGGCAGTTTCTGGCAAGCATGAGAGTGATTT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACAACTATATCTGTCTTaGGGGCCTGTTTTCTACATG +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAQLYLS*GPVFYM
Trigger: CATGTAGAAAACAGGCCCCAAAGACAGATATAGTTG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGGGTGGCGTTCACAGCTaGATCAATAGTGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEGGVHS*INSGTS
Trigger: GCTGGTTCCACTATTGATCAAGCTGTGAACGCCACC...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCACATAGGAGTATTTCTTaGCTGTGTAGCATCCATAGC +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAHRSIS*LCSIHS
Trigger: GCTATGGATGCTACACAGCAAAGAAATACTCCTATG...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTACACTCTGCAAACACTaGCTCAGGGTTTGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESTLCKH*LRVWSN
Trigger: ATTACTCCAAACCCTGAGCAAGTGTTTGCAGAGTGT...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAACACTCTGCAAACACTaGCTCAGGGTTTGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMETLCKH*LRVWSN
Trigger: ATTACTCCAAACCCTGAGCAAGTGTTTGCAGAGTGT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTGTTTTATATAAACCTTaGAGAGCCAGGGACAGGACC +
Preference number: 5 (lower is better)
Translates to: PAGSGSANAVLCQLPEESVLYKP*RARDRT
Trigger: GGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAAC...AGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATCTGGGTCACAGGATTaGATTCAGGAGTGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSGSQD*IQEWLG
Trigger: ACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTTGCAGTTCAGCTCCTaGTGCAGGAGGGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKLQFSS*CRRAAL
Trigger: GAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCAA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CAACATCTGGCTTCATCTTCAAACGTATCCAGTGTGAGCGCGCACTaGCATCTGACTGCCAGTAGGATGATGTTTCTCCATTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: QHLASSSNVSSVSAH*HLTASRMMFLHLSS
Trigger: GGATGACAAATGGAGAAACATCATCCTACTGGCAGTCAGATGGCAGTGCGCGCTCACACTGGATACGTTTGAAGATGAAGCCAGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TGCCTTTTTCTTCTGCTTATAATCCAAGGGTCTTACTTCCGTATCTaGAGCTCTCTTTCCGTTGCAGGGTACCAACAGGCCTGCATCTGC +
Preference number: 5 (lower is better)
Translates to: CLFLLLIIQGSYFRI*SSLSVAGYQQACIC
Trigger: GCAGATGCAGGCCTGTTGGTACCCTGCAACGGAAAGAGAGCTGCAGATACGGAAGTAAGACCCTTGGATTATAAGCAGAAGAAAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CTTTTCTTCCAGCTGCATGAACATATCCAGAATGTAGGTCATATGTaGAGGGCCACTAAGCTCCAGGATGTCCTCACTCACTGGCACATG +
Preference number: 5 (lower is better)
Translates to: LFFQLHEHIQNVGHM*RATKLQDVLTHWHM
Trigger: CATGTGCCAGTGAGTGAGGACATCCTGGAGCTTAGTGGCCCTGCACATATGACCTACATTCTGGATATGTTCATGCAGCTGGAAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp ATCCTTGTGTGGGTGAGTGGGCCAGCTTGCTTCCAATTCCAACTCTaGACAAATCTGATGCCTGAAGACAGGTTTCCACAATGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: ILVWVSGPACFQFQL*TNLMPEDRFPQWRV
Trigger: AACTCTCCATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACCCACACAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATGCCAAGGCCCTCCTTaGACTCTGAAAATATGTCGA +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILCQGPP*TLKICR
Trigger: TCGACATATTTTCAGAGTCAAAGGAGGGCCTTGGCA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGGAAGCGCAATATCATaGATGAGTGAATGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILGSAIS*MSECQG
Trigger: GCCTTGGCATTCACTCATCAATGATATTGCGCTTCC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GAAGGCATAGCACCTTTGCACAAGATGCTCCCACACCTGCAGGTTCAGGTTCTGTTCTTTTTGTACCAGTaGATCCAGAGACTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: EGIAPLHKMLPHLQVQVLFFLYQ*IQRLLQ
Trigger: CTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGAA...CAGAACCTGAACCTGCAGGTGTGGGAGCATCTTGTGCAAAGGTGCTATGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAGCTTTCCTTTTCTTTTaGTACCAGTTGATCCAGAGA +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAAFLFF*YQLIQR
Trigger: TCTCTGGATCAACTGGTACAAAAAGAAAAGGAAAGC...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGAGAGAGCTCATTACTTaGGCAATACTTCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALRELIT*AILPLA
Trigger: AGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTCT...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAATTCACCATCAAGAATTaGGCAACTCTGCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMEFTIKN*ATLHCC
Trigger: ACAACAGTGCAGAGTTGCCAAATTCTTGATGGTGAA...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGCAGGAAGATGACCAGTaGACGAGCTGCCATGGAAAA +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEQEDDQ*TSCHGK
Trigger: TTTTCCATGGCAGCTCGTCAACTGGTCATCTTCCTG...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGATGGAAAAGTCATCACATACATaGCAATTCATTCTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: PSRQSCLLRVKGILALMEKSSHT*QFILRP
Trigger: AGGCCGGAGAATGAATTGCAATGTATGTGATGACTT...TTCCATCAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGACATAGGAGTATTTCTTaGCTGTGTAGCATCCATAGC +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRHRSIS*LCSIHS
Trigger: GCTATGGATGCTACACAGCAAAGAAATACTCCTATG...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTGTTGGTGTGCTTCAGTaGGAATGGCAGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFVGVLQ*EWQLLD
Trigger: ATCAAGCAGCTGCCATTCCAACTGAAGCACACCAAC...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CTTCTCTGGGGTTTAGGCCGCTTGCAAAGCGTAGGTGCTTTGGCAAAGAGCAAAAGCAGAGTGAAGATGTaGGTGTGCTTCAGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: LLWGLGRLQSVGALAKSKSRVKM*VCFSWN
Trigger: ATTCCAACTGAAGCACACCAACATCTTCACTCTGCT...TTTGCTCTTTGCCAAAGCACCTACGCTTTGCAAGCGGCCTAAACCCCAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CACACCTGCAGGTTCAGGTTCTGCCAATGCAGTCCTTTGCCAACTCCCAGAAGATTCCTTTTCCTTGTTTaGACGTCGACAATCACAGCT +
Preference number: 5 (lower is better)
Translates to: HTCRFRFCQCSPLPTPRRFLFLV*TSTITA
Trigger: AGCTGTGATTGTCGACGTCAAAACAAGGAAAAGGAA...TCTTCTGGGAGTTGGCAAAGGACTGCATTGGCAGAACCTGAACCTGCAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTGTCTCCGTCCAGGCAGTCTTGCCTCCTAAGAGTCAAGGGGATATTGGCCTTGTTCCTTTTCCTTGTTTaGACGTCGACAATCACAGCT +
Preference number: 5 (lower is better)
Translates to: LSPSRQSCLLRVKGILALFLFLV*TSTITA
Trigger: AGCTGTGATTGTCGACGTCAAAACAAGGAAAAGGAA...CAAGGCCAATATCCCCTTGACTCTTAGGAGGCAAGACTGCCTGGACGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTCTGGGTCACAGGATTaGATTCAGGAGTGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESGSQD*IQEWLG
Trigger: ACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ATCTCTAACATCCATATTCGAATCCCATCTGCCAGGGAATACACCTaGGAGAACTCCTCAGTCAGGGCTATCTTGCCACCGCTGTTAACA +
Preference number: 5 (lower is better)
Translates to: ISNIHIRIPSAREYT*ENSSVRAILPPLLT
Trigger: TGTTAACAGCGGTGGCAAGATAGCCCTGACTGAGGAGTTCTCTCAGGTGTATTCCCTGGCAGATGGGATTCGAATATGGATGTTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp AGCAGATCGGTCTGGAGGAAGGTGGCATGGGTCTCTTCAAAACCATaGGCCTTTAGTGTTTTATATAAACCTTTGAGAGCCAGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SRSVWRKVAWVSSKP*AFSVLYKPLRARDR
Trigger: CCTGTCCCTGGCTCTCAAAGGTTTATATAAAACACTAAAGGCTCATGGTTTTGAAGAGACCCATGCCACCTTCCTCCAGACCGATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp AACTCCTCAGTCAGGGCTATCTTGCCACCGCTGTTAACATATTTTTaGAGCTTCTCATATAAGTCTGGAGTGCGATACACCAGAGCGGCA +
Preference number: 5 (lower is better)
Translates to: NSSVRAILPPLLTYF*SFSYKSGVRYTRAA
Trigger: TGCCGCTCTGGTGTATCGCACTCCAGACTTATATGAGAAGCTGCAAAAATATGTTAACAGCGGTGGCAAGATAGCCCTGACTGAGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GCCATGGATGAGATGAGGGATGAGGCGTCATACTGTGTGTCCAAGTaGTCAGTGATGGTACACAGAGAGCTCATTACTTTGGCAATACTT +
Preference number: 5 (lower is better)
Translates to: AMDEMRDEASYCVSK*SVMVHRELITLAIL
Trigger: AAGTATTGCCAAAGTAATGAGCTCTCTGTGTACCATCACTGACCACTTGGACACACAGTATGACGCCTCATCCCTCATCTCATCCATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGAACAAGAGAGCAGGCTaGCAGTTGTCTGATGACATG +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMENKRAG*QLSDDM
Trigger: CATGTCATCAGACAACTGCAAGCCTGCTCTCTTGTT...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCCAATGCAGTCCTTTGCCAACTCCCAGAAGAGTCTTCAGAGGCCAAAGGGGCAATGATGTTTCTCCATTaGTCATCCTGTATATGTCTG +
Preference number: 5 (lower is better)
Translates to: ANAVLCQLPEESSEAKGAMMFLH*SSCICL
Trigger: CAGACATATACAGGATGACAAATGGAGAAACATCAT...TGCCCCTTTGGCCTCTGAAGACTCTTCTGGGAGTTGGCAAAGGACTGCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGGCCCCATGGGACCGATaGAGCATCAACAATTCACAC +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKAPWDR*SINNSH
Trigger: GTGTGAATTGTTGATGCTCAATCGGTCCCATGGGGC...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp GCTCTTTCTGAGCCACTCTACACTGCTGTGCCTTTTTGGACATGTGGCGCCTGCTCGACAGTTTCCAACTaGTCACAGTTTTCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: ALSEPLYTAVPFWTCGACSTVSN*SQFSFE
Trigger: TTCAAAAGAAAACTGTGACAAGTTGGAAACTGTCGA...GCAGGCGCCACATGTCCAAAAAGGCACAGCAGTGTAGAGTGGCTCAGAAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTGGAATGGCAGCTGCTaGATGCAGTGGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKWNGSC*MQWSVK
Trigger: CTTCACAGACCACTGCATCAAGCAGCTGCCATTCCA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAAGCAGAGTGAAGATGTaGGTGTGCTTCAGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILSRVKM*VCFSWN
Trigger: ATTCCAACTGAAGCACACCAACATCTTCACTCTGCT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAGTTTTATATAAACCTTaGAGAGCCAGGGACAGGACC +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILVLYKP*RARDRT
Trigger: GGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAAC...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTTTAGATTCCCTCACTaGCACCTCCATTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMEFRFPH*HLHSWF
Trigger: GAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAAA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CGAGGGATTCTGTGCAATACTGAATTATCCTCAGGACTTCAAGTATaGTCTGCCCTTGGGCTTTCCGCAAAGAAAGAACCTTCACAACAC +
Preference number: 5 (lower is better)
Translates to: RGILCNTELSSGLQV*SALGLSAKKEPSQH
Trigger: GTGTTGTGAAGGTTCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGAGGATAATTCAGTATTGCACAGAATCCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp AGAAGGCCTCCTGGATCCTTATCACTAAAATATGTGCAGAGTGAATaGAAAGTGAGTTGCAGAGACTGCTTGCGTTCGTGCTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: RRPPGSLSLKYVQSE*KVSCRDCLRSCSVT
Trigger: TGTCACTGAGCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCACATATTTTAGTGATAAGGATCCAGGAGGCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GAAATGTTCTTCCACCACAGAGCTTGTCCTCTGGCGTCTATCAAGTaGCTGGAGATGATCAGTTTCATCGACAGTTTCCAACTTGTCACA +
Preference number: 5 (lower is better)
Translates to: EMFFHHRACPLASIK*LEMISFIDSFQLVT
Trigger: TGTGACAAGTTGGAAACTGTCGATGAAACTGATCATCTCCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAGAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGATGCTAGAGATCCGATaGCGATGCAGGAAGCGCAAT +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKMLEIR*RCRKRN
Trigger: ATTGCGCTTCCTGCATCGCAATCGGATCTCTAGCAT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTACAACTATATCTGTCTTaGGGGCCTGTTTTCTACATG +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILQLYLS*GPVFYM
Trigger: CATGTAGAAAACAGGCCCCAAAGACAGATATAGTTG...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGATCTTTCCACTTCTGTaGCGACCCGCTGAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKIFPLL*RPAEVV
Trigger: CACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGAT...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp CTTCTGGCTAGATCTCCAGGGCTTTCCTTTTCTTTTTGTACCAGTTaGTCCAGAGACTCCTTCAGAACTGATGATCTCATGGTGCACATG +
Preference number: 5 (lower is better)
Translates to: LLARSPGLSFSFCTS*SRDSFRTDDLMVHM
Trigger: CATGTGCACCATGAGATCATCAGTTCTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGAAAAGGAAAGCCCTGGAGATCTAGCCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp GGTTGGAGGACGTTTCTATATAAGCATAACACTTGGTTACTGACTTaGGCTTATCCATCTCTGGGCTTCTGGCTAGATCTCCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: GWRTFLYKHNTWLLT*AYPSLGFWLDLQGF
Trigger: AAAGCCCTGGAGATCTAGCCAGAAGCCCAGAGATGGATAAGCTCAAGTCAGTAACCAAGTGTTATGCTTATATAGAAACGTCCTCCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TCCACCACAGAGCTTGTCCTCTGGCGTCTATCAAGTGGCTGGAGATaGTCAGTTTCATCGACAGTTTCCAACTTGTCACAGTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: STTELVLWRLSSGWR*SVSSTVSNLSQFSF
Trigger: AAAAGAAAACTGTGACAAGTTGGAAACTGTCGATGAAACTGATCATCTCCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp CATAGACGCTGTCACCAAAGATGTCAGCAGAGACCAATACCATATTaGAGAGGCATCAGAGACAGAGACTCCAGATTTCTTTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: HRRCHQRCQQRPIPY*RGIRDRDSRFLYSL
Trigger: CAGAGAGTAAAGAAATCTGGAGTCTCTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTCTGCTGACATCTTTGGTGACAGCGTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp TCACTAAAATATGTGCAGAGTGAATGGAAAGTGAGTTGCAGAGACTaGTTGCGTTCGTGCTCAGTGACACTCTTCATCATGGTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SLKYVQSEWKVSCRD*LRSCSVTLFIMVKS
Trigger: GCTCTTCACCATGATGAAGAGTGTCACTGAGCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCACATATTTTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTAGAGAGCTCATTACTTaGGCAATACTTCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFRELIT*AILPLA
Trigger: AGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTCT...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTTTGAATACATTCTTTaGCCAGGCTCTCTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFFEYIL*PGSLGS
Trigger: TGAACCCAGAGAGCCTGGCAAAAGAATGTATTCAAA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTATGTCACAGTTTTCTTTaGAACTTTTGCTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILCHSFL*NFCSWA
Trigger: TGCCCATGAGCAAAAGTTCAAAAGAAAACTGTGACA...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp CTAGAGATCCGATTGCGATGCAGGAAGCGCAATATCATTGATGAGTaGATGCCAAGGCCCTCCTTTGACTCTGAAAATATGTCGATGAAA +
Preference number: 5 (lower is better)
Translates to: LEIRLRCRKRNIIDE*MPRPSFDSENMSMK
Trigger: TTTCATCGACATATTTTCAGAGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGATATTGCGCTTCCTGCATCGCAATCGGATCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp GGAACTTCACCATCAAGAATTTGGCAACTCTGCACTGTTGTAACTTaGCATCTGCTTCATCCCACTCTTCTTCTAGCTCAAACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GTSPSRIWQLCTVVT*HLLHPTLLLAQTSQ
Trigger: TTGGCTGGTTTGAGCTAGAAGAAGAGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAGAGTTGCCAAATTCTTGATGGTGAAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp ACACTGATGTTTTCTTGGGACATGTTCATGAGGAGATCTGGTAACTaGATGTCAACAAAGAAGGCAAGATCACTGGGTTCCCAGCCCATA +
Preference number: 5 (lower is better)
Translates to: TLMFSWDMFMRRSGN*MSTKKARSLGSQPI
Trigger: TATGGGCTGGGAACCCAGTGATCTTGCCTTCTTTGTTGACATTCAGTTACCAGATCTCCTCATGAACATGTCCCAAGAAAACATCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GTACCAGTTGATCCAGAGACTCCTTCAGAACTGATGATCTCATGGTaGACATGTTATTACAGTGGTCTAACATTGGGTAGGGAATCACCA +
Preference number: 5 (lower is better)
Translates to: VPVDPETPSELMISW*TCYYSGLTLGRESP
Trigger: TGGTGATTCCCTACCCAATGTTAGACCACTGTAATAACATGTGCACCATGAGATCATCAGTTCTGAAGGAGTCTCTGGATCAACTGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp CCGGTCAGAGAGCAGCTGTGGTGTGTGAAGAAGGGCAAACTTAAGCTCATTCTAATGATGTTTCTCCATTaGTCATCCTGTATATGTCTG +
Preference number: 5 (lower is better)
Translates to: PVREQLWCVKKGKLKLILMMFLH*SSCICL
Trigger: CAGACATATACAGGATGACAAATGGAGAAACATCAT...TAGAATGAGCTTAAGTTTGCCCTTCTTCACACACCACAGCTGCTCTCTGACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTCCCTCTGATGTCAGGGTGGTGGACCATAGGTCACTCCATTTGTTTCTGCTTTTGTCACAGTTTTCTTTaGAACTTTTGCTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: FPLMSGWWTIGHSICFCFCHSFL*NFCSWA
Trigger: TGCCCATGAGCAAAAGTTCAAAAGAAAACTGTGACA...AAAGCAGAAACAAATGGAGTGACCTATGGTCCACCACCCTGACATCAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TTCATCACAGCCTTCCTCAGTGTTGCACTGAGGGTCAAATTTGATTaGGAGGTAGATTGCACCAGGAATGTGAACTTTATCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: FITAFLSVALRVKFD*EVDCTRNVNFILKA
Trigger: AGCTTTGAGGATAAAGTTCACATTCCTGGTGCAATCTACCTCTCAATCAAATTTGACCCTCAGTGCAACACTGAGGAAGGCTGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp TTTCCTGAGCAAGGTTGGAGGTCTGCTATAAACCCCTGTAGACAAATGATCAAGTTTGAATACATTCTTTaGCCAGGCTCTCTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: FPEQGWRSAINPCRQMIKFEYIL*PGSLGS
Trigger: TGAACCCAGAGAGCCTGGCAAAAGAATGTATTCAAA...CTTGATCATTTGTCTACAGGGGTTTATAGCAGACCTCCAACCTTGCTCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS-3UTR CAA 90 bp AAACTGAAGCACGTAGAGAAAACAGCAAGCAGTGAGTGGAGAGGAGCTATGGAGTCGACAGTTTCCAACTaGTCACAGTTTTCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: KLKHVEKTASSEWRGAMESTVSN*SQFSFE
Trigger: TTCAAAAGAAAACTGTGACAAGTTGGAAACTGTCGA...CTCCATAGCTCCTCTCCACTCACTGCTTGCTGTTTTCTCTACGTGCTTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 90 bp TTTTCAGGTCCTGACTTATCTTCTTTTCCTTTAACATCACAAGCCTaGAGAGTCAACTGGAGAGGCTTACCATATTTCAGGAGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FSGPDLSSFPLTSQA*RVNWRGLPYFRSRF
Trigger: GAACCTGCTCCTGAAATATGGTAAGCCTCTCCAGTTGACTCTTCAGGCTTGTGATGTTAAAGGAAAAGAAGATAAGTCAGGACCTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TTTGTACCAGTTGATCCAGAGACTCCTTCAGAACTGATGATCTCATaGTGCACATGTTATTACAGTGGTCTAACATTGGGTAGGGAATCA +
Preference number: 5 (lower is better)
Translates to: FVPVDPETPSELMIS*CTCYYSGLTLGRES
Trigger: TGATTCCCTACCCAATGTTAGACCACTGTAATAACATGTGCACCATGAGATCATCAGTTCTGAAGGAGTCTCTGGATCAACTGGTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp GTTCACAGCTTGATCAATAGTGGAACCAGCAACTATATCTGTCTTTaGGGCCTGTTTTCTACATGCCTGTATGAATCCTTTGAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VHSLINSGTSNYICL*GLFSTCLYESFEKF
Trigger: GAACTTTTCAAAGGATTCATACAGGCATGTAGAAAACAGGCCCCAAAGACAGATATAGTTGCTGGTTCCACTATTGATCAAGCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp GAGTTTCCATTTGTCATATTTTTCAAACCGTTTGAAGTGTTCTTCTaGGTGAAACTTATTAGAAGGCGAGTTATAGGCAAAGACCAGCCC +
Preference number: 5 (lower is better)
Translates to: EFPFVIFFKPFEVFF*VKLIRRRVIGKDQP
Trigger: GGGCTGGTCTTTGCCTATAACTCGCCTTCTAATAAGTTTCACGCAGAAGAACACTTCAAACGGTTTGAAAAATATGACAAATGGAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp TCAGATGAGCAACCAATCCTGCTTTTTACGAACTGCCTCAGTTCCTaGAGTTTCCATTTGTCATATTTTTCAAACCGTTTGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SDEQPILLFTNCLSS*SFHLSYFSNRLKCS
Trigger: AGAACACTTCAAACGGTTTGAAAAATATGACAAATGGAAACTCCAGGAACTGAGGCAGTTCGTAAAAAGCAGGATTGGTTGCTCATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 90 bp AGCAGGGAGCAGAGACCTGTCATTTATGCTACTAAATCTTTTGATTaGTTTGACCAAAAACAGAACAAGTTGATAGTAAGTGTCTCGGAT +
Preference number: 5 (lower is better)
Translates to: SREQRPVIYATKSFD*FDQKQNKLIVSVSD
Trigger: ATCCGAGACACTTACTATCAACTTGTTCTGTTTTTGGTCAAAGCAATCAAAAGATTTAGTAGCATAAATGACAGGTCTCTGCTCCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 90 bp AGTCTCACACCTCTCATCAAATTCCACCTCAAAATAAGTTGCTCCTaGGCTAATAAAGACAGACACTTCATGGCAGTTATTTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: SLTPLIKFHLKISCS*ANKDRHFMAVIFIV
Trigger: AACTATGAAAATAACTGCCATGAAGTGTCTGTCTTTATTAGCCCAGGAGCAACTTATTTTGAGGTGGAATTTGATGAGAGGTGTGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GGATTCGCAGGGAGGTGCGGGCCGCAACGCAGCCGCTaGCTCTCGCAGCCGAGCGGGTTCCAGGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GFAGRCGPQRSR*LSQPSGFQECS
Trigger: GCTGCACTCCTGGAACCCGCTCGGCTGCGAGAGGCAGCGGCTGCGTTGCGGCCCGCACCTCCCTGCGAATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp AGCCGCTCTTCCAGCCAGCGCAAGAGCGCGCCGTGGTaGCTCGACACCAGGGATTCGCAGGGAGGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: SRSSSQRKSAPW*LDTRDSQGGAG
Trigger: GCCCGCACCTCCCTGCGAATCCCTGGTGTCGAGGCACCACGGCGCGCTCTTGCGCTGGCTGGAAGAGCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CCCAGCCGCTCTTCCAGCCAGCGCAAGAGCGCGCCGTaGTGCCTCGACACCAGGGATTCGCAGGGAGGTGCG +
Preference number: 6 (lower is better)
Translates to: PSRSSSQRKSAP*CLDTRDSQGGA
Trigger: CGCACCTCCCTGCGAATCCCTGGTGTCGAGGCACCACGGCGCGCTCTTGCGCTGGCTGGAAGAGCGGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CATCCAGCGCCGCGAGCCTCCAGCAACTCCCGGAACTaGTCCAGGGTGACGGACTCTTCACCGCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: HPAPRASSNSRN*SRVTDSSPRPS
Trigger: GCTGGGCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCTGGAGGCTCGCGGCGCTGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CGCGAGCCTCCAGCAACTCCCGGAACTGCTCCAGGGTaGCGGACTCTTCACCGCGGCCCAGCCGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: REPPATPGTAPG*RTLHRGPAALP
Trigger: TGGAAGAGCGGCTGGGCCGCGGTGAAGAGTCCGTCACCCTGGAGCAGTTCCGGGAGTTGCTGGAGGCTCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp AGCCCAATCTTGATGTGGGCTCCAGCCCTCACCCCCTaGGGCCGCCGCTTCGTCTTCGCTGCTGTTACTCGG +
Preference number: 6 (lower is better)
Translates to: SPILMWAPALTP*GRRFVFAAVTR
Trigger: CCGAGTAACAGCAGCGAAGACGAAGCGGCGGCCGCAGGGGGTGAGGGCTGGAGCCCACATCAAGATTGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GGTGGGCCTTCATCAGACAGTCCCCAACCAGCTGCATaGACTGGCTCCTCAGGGTGGCAGCATTGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: GGPSSDSPQPAA*TGSSGWQHWCG
Trigger: CCCGCACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CCACTAAGCTCCAGGATGTCCTCACTCACTGGCACATaGCCTGGCCACTCGGCCAGCAGGGAGGCGAGCACA +
Preference number: 6 (lower is better)
Translates to: PLSSRMSSLTGT*PGHSASREAST
Trigger: TGTGCTCGCCTCCCTGCTGGCCGAGTGGCCAGGGCATGTGCCAGTGAGTGAGGACATCCTGGAGCTTAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GCCTTCATCAGACAGTCCCCAACCAGCTGCATGCACTaGCTCCTCAGGGTGGCAGCATTGGTGCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: AFIRQSPTSCMH*LLRVAALVRAW
Trigger: CCAGGCCCGCACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TGCCCTGGCCACTCGGCCAGCAGGGAGGCGAGCACATaGCGAGCATATAGGACTGAGGTGGCCTCGTTCACA +
Preference number: 6 (lower is better)
Translates to: CPGHSASREAST*RAYRTEVASFT
Trigger: TGTGAACGAGGCCACCTCAGTCCTATATGCTCGCCATGTGCTCGCCTCCCTGCTGGCCGAGTGGCCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CTTGCAGGCCGGAGGTACCCACTGATGCTTAAGCCTTaGACGCCCAACCGTTCAGCTGACTCCTGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: LAGRRYPLMLKP*TPNRSADSWRV
Trigger: CACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGCCTGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CCCTGGTGGGCCTTCATCAGACAGTCCCCAACCAGCTaGATGCACTGGCTCCTCAGGGTGGCAGCATTGGTG +
Preference number: 6 (lower is better)
Translates to: PWWAFIRQSPTS*MHWLLRVAALV
Trigger: CACCAATGCTGCCACCCTGAGGAGCCAGTGCATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CGGATAGCCCGCTTGCTCTTGCAGTTCAGCTCCTTGTaGAGGAGGGCAGCACTCTTGCTCCGGCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RIARLLLQFSSL*RRAALLLRRCL
Trigger: CAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCAAGAGCAAGCGGGCTATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TGTGCAGGAGGGCAGCACTCTTGCTCCGGCGCTGCTTaGCATAGCTCTGCTGTAGCTCGCTCTCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: CAGGQHSCSGAA*HSSAVARSLCW
Trigger: CCAGCACAGAGAGCGAGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GTTCCGCTTCTGCCCTTGCAGGCCGGAGGTACCCACTaGTGCTTAAGCCTTGCACGCCCAACCGTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: VPLLPLQAGGTH*CLSLARPTVQL
Trigger: CAGCTGAACGGTTGGGCGTGCAAGGCTTAAGCATCAGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GCAGGGTACCAACAGGCCTGCATCTGCCTGCTCCTCTaGTGCCTGGAAGGACACTGTGACTGGCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: AGYQQACICLLL*CLEGHCDWQGL
Trigger: CAAGCCCTGCCAGTCACAGTGTCCTTCCAGGCATCAGAGGAGCAGGCAGATGCAGGCCTGTTGGTACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GCCATGGAGCAGGCCCAGTCCAGGCCCACTCGGAGGTaGTGCTTGGCTGAAAGGACCTTCATGACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: AMEQAQSRPTRR*CLAERTFMTAA
Trigger: TGCTGCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTCCGAGTGGGCCTGGACTGGGCCTGCTCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
CDS GCA 72 bp TGCAGTTCAGCTCCTTGTGCAGGAGGGCAGCACTCTTaGTCCGGCGCTGCTTGGCATAGCTCTGCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: CSSAPCAGGQHS*SGAAWHSSAVA
Trigger: AGCTACAGCAGAGCTATGCCAAGCAGCGCCGGAGCAAGAGTGCTGCCCTCCTGCACAAGGAGCTGAACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GGCGGCAGGCCACACCCACCAGCCATTCCCAGATCTTaGCCAATGCGAGGTGAGGTACAACCCTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: GGRPHPPAIPRS*PMRGEVQPFLQ
Trigger: CTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGGTGTGGCCTGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GAGCCTGTGCTGCACATCGGAGAAGGTGGTCCTCGGTaGTTAAGGCCAGCAGGTACTCCTGAAGCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: EPVLHIGEGGPR*LRPAGTPEAGQ
Trigger: TTGGCCTGCTTCAGGAGTACCTGCTGGCCTTAACCACCGAGGACCACCTTCTCCGATGTGCAGCACAGGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CTGTGGACACTTCTGCAACACAGGGGCCACTACTGGGTAGTAGCTTaGGCTGGATCTCTAAGGCAGGACTCCTGTCACCTGCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LWTLLQHRGHYWVVA*AGSLRQDSCHLQLG
Trigger: CCCCAGCTGCAGGTGACAGGAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACCCAGTAGTGGCCCCTGTGTTGCAGAAGTGTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TGGTCTGTGAAGGTGGCAATGACATCTCGCCACAACGGGGCATTGTaGAGTGACCGAAGGATCTCTGCCATGGAGCAGGCCCAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: WSVKVAMTSRHNGAL*SDRRISAMEQAQSR
Trigger: CCTGGACTGGGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTTCACAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CAGTGGTCTGTGAAGGTGGCAATGACATCTCGCCACAACGGGGCATaGTTGAGTGACCGAAGGATCTCTGCCATGGAGCAGGCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: QWSVKVAMTSRHNGA*LSDRRISAMEQAQS
Trigger: GGACTGGGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTTCACAGACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GGCAATGACATCTCGCCACAACGGGGCATTGTTGAGTaGCCGAAGGATCTCTGCCATGGAGCAGGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GNDISPQRGIVE*PKDLCHGAGPV
Trigger: GACTGGGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp ACTGGCACTCCTTCCCACAGCCACTGTCACCTGCTGTaGCATGTAGCTCTGGTCAGTGGCAGCCACTGCAAT +
Preference number: 6 (lower is better)
Translates to: TGTPSHSHCHLL*HVALVSGSHCN
Trigger: ATTGCAGTGGCTGCCACTGACCAGAGCTACATGCCACAGCAGGTGACAGTGGCTGTGGGAAGGAGTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GAGCCTCTGCCGGTCACTGATGCGGATGGTCACCATTaGATGGGCTGTGATGCTGTGAGTTGGCAAATGGCC +
Preference number: 6 (lower is better)
Translates to: EPLPVTDADGHH*MGCDAVSWQMA
Trigger: GGCCATTTGCCAACTCACAGCATCACAGCCCATCCAATGGTGACCATCCGCATCAGTGACCGGCAGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp CTCTGTGTCCCTTCTACAGTGGGCATAGAGGATGCTTaGTTCCGCTTCTGCCCTTGCAGGCCGGAGGTACCC +
Preference number: 6 (lower is better)
Translates to: LCVPSTVGIEDA*FRFCPCRPEVP
Trigger: GGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGCATCCTCTATGCCCACTGTAGAAGGGACACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TCTGGATGTTCAGCATCTGGAAGTCCTGGAGGCACGTaGGCACTGGCAGGTGCATCTGAAACCTGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SGCSASGSPGGT*ALAGASETWVW
Trigger: CCAGACCCAGGTTTCAGATGCACCTGCCAGTGCTCACGTGCCTCCAGGACTTCCAGATGCTGAACATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CTGTCTGGAACCGCCCCAGATGTCCAGCTGTCACAGTaGATCGGTATCCCCACTCAGTGTTGCTCATGTCCG +
Preference number: 6 (lower is better)
Translates to: LSGTAPDVQLSQ*IGIPTQCCSCP
Trigger: CGGACATGAGCAACACTGAGTGGGGATACCGATTCACTGTGACAGCTGGACATCTGGGGCGGTTCCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp TTGGTCCAGGTATGCAATACCACAGGCTGCTCCTGCTaGCAGGTCTCCACATCCAACTTGCTCAGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LVQVCNTTGCSC*QVSTSNLLRPP
Trigger: AGGAGGCCTGAGCAAGTTGGATGTGGAGACCTGGCAGCAGGAGCAGCCTGTGGTATTGCATACCTGGACCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GGCCCTCGGGCTTCACTCCACCAAGGAAGCAAGTCTTaGAGAGGTCCATGTCACTGCACTGTAGACATCGGT +
Preference number: 6 (lower is better)
Translates to: GPRASLHQGSKS*RGPCHCTVDIG
Trigger: ACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTGGAGTGAAGCCCGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GCAACACAGGGGCCACTACTGGGTAGTAGCTTTGGCTaGATCTCTAAGGCAGGACTCCTGTCACCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: ATQGPLLGSSFG*ISKAGLLSPAA
Trigger: AGCTGCAGGTGACAGGAGTCCTGCCTTAGAGATCCAGCCAAAGCTACTACCCAGTAGTGGCCCCTGTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GTGGCCTGCGTTGGAGATGACCACCTGAAACATGAGTaGGAGGACGTGCTCCAGATCTATCAGGGGGACTGT +
Preference number: 6 (lower is better)
Translates to: VACVGDDHLKHE*EDVLQIYQGDC
Trigger: ACAGTCCCCCTGATAGATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAACGCAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp AGCTTCTGGGTCACAGGATTTGATTCAGGAGTGGCTTaGTCAGAGCGTGCAGGCCGGGACAAGCATGGCAAG +
Preference number: 6 (lower is better)
Translates to: SFWVTGFDSGVA*SERAGRDKHGK
Trigger: CTTGCCATGCTTGTCCCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GGCTGCAGCATTGCACAATCCTCAGTAGTAAGTGGATaGCTTTCAGGCGCTGATGACCGGTTTGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GCSIAQSSVVSG*LSGADDRFGGR
Trigger: CCTGCCGCCAAACCGGTCATCAGCGCCTGAAAGCCATCCACTTACTACTGAGGATTGTGCAATGCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GGAAGCAAGGCGCCCCATCAGTCGGGAGACAAGGAGTaGCAAGTCCAAACCCCAAGACACAGCAACATCAGG +
Preference number: 6 (lower is better)
Translates to: GSKAPHQSGDKE*QVQTPRHSNIR
Trigger: CCTGATGTTGCTGTGTCTTGGGGTTTGGACTTGCAACTCCTTGTCTCCCGACTGATGGGGCGCCTTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TGGCCCTCGGGCTTCACTCCACCAAGGAAGCAAGTCTaGCAGAGGTCCATGTCACTGCACTGTAGACATCGG +
Preference number: 6 (lower is better)
Translates to: WPSGFTPPRKQV*QRSMSLHCRHR
Trigger: CCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTGGAGTGAAGCCCGAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AAGGTGGCAATGACATCTCGCCACAACGGGGCATTGTaGAGTGACCGAAGGATCTCTGCCATGGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: KVAMTSRHNGAL*SDRRISAMEQA
Trigger: GGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TCAATAAGATCCATGGCGAGCTCTTTGGCTGCAGCATCTGTGCTCTaGAGCTGCAGGAAGCACCAGGAGAGCAGGCTGCCTTGCACAGAC +
Preference number: 6 (lower is better)
Translates to: SIRSMASSLAAASVL*SCRKHQESRLPCTD
Trigger: GTCTGTGCAAGGCAGCCTGCTCTCCTGGTGCTTCCTGCAGCTCAAGAGCACAGATGCTGCAGCCAAAGAGCTCGCCATGGATCTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CATGCACTGGGAAGCAAGGCGCCCCATCAGTCGGGAGACAAGGAGTaGCAAGTCCAAACCCCAAGACACAGCAACATCAGGCAGACCATA +
Preference number: 6 (lower is better)
Translates to: HALGSKAPHQSGDKE*QVQTPRHSNIRQTI
Trigger: TATGGTCTGCCTGATGTTGCTGTGTCTTGGGGTTTGGACTTGCAACTCCTTGTCTCCCGACTGATGGGGCGCCTTGCTTCCCAGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TCGTCTCCATGGCCCTCGGGCTTCACTCCACCAAGGAAGCAAGTCTaGCAGAGGTCCATGTCACTGCACTGTAGACATCGGTATCGATGC +
Preference number: 6 (lower is better)
Translates to: SSPWPSGFTPPRKQV*QRSMSLHCRHRYRC
Trigger: GCATCGATACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTGGAGTGAAGCCCGAGGGCCATGGAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CAGAGGACCTGGGGGAAGCCGACAAGCACCAGCAGAGTGAAGATGTaGGTGTGCTTCAGTTGGAATGGCAGCTGCTTGATGCAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: QRTWGKPTSTSRVKM*VCFSWNGSCLMQWS
Trigger: AGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTCGGCTTCCCCCAGGTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TTGCATTGCACCTCCATTCCTGGTTCCTCCATGAACTaGCAGGCAGCCAAGGCCATGGTGCCCAGCATGTTC +
Preference number: 6 (lower is better)
Translates to: LHCTSIPGSSMN*QAAKAMVPSMF
Trigger: GAACATGCTGGGCACCATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAATGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069395.7
CDS GCA 72 bp CTTGCACGCCCAACCGTTCAGCTGACTCCTGGCGGGTaGAGAGGAACTTCACCATCAAGAATTTGGCAACTC +
Preference number: 6 (lower is better)
Translates to: LARPTVQLTPGG*RGTSPSRIWQL
Trigger: GAGTTGCCAAATTCTTGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp AGGGTCTTACTTCCGTATCTGCAGCTCTCTTTCCGTTaGAGGGTACCAACAGGCCTGCATCTGCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: RVLLPYLQLSFR*RVPTGLHLPAP
Trigger: AGGAGCAGGCAGATGCAGGCCTGTTGGTACCCTGCAACGGAAAGAGAGCTGCAGATACGGAAGTAAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CCAAGAAGAGCCAGAGCTTTAAGACCTTTGCCCTGGTaGGCCTTCATCAGACAGTCCCCAACCAGCTGCATG +
Preference number: 6 (lower is better)
Translates to: PRRARALRPLPW*AFIRQSPTSCM
Trigger: CATGCAGCTGGTTGGGGACTGTCTGATGAAGGCCCACCAGGGCAAAGGTCTTAAAGCTCTGGCTCTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GTGAAGGTGGCAATGACATCTCGCCACAACGGGGCATaGTTGAGTGACCGAAGGATCTCTGCCATGGAGCAG +
Preference number: 6 (lower is better)
Translates to: VKVAMTSRHNGA*LSDRRISAMEQ
Trigger: CTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTTGTGGCGAGATGTCATTGCCACCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GTACTGGCTCAGCTGGGACTGAGAGGTGCCACACTCTaGTCCTCCTCCCTTCTGGACAAGCTGATAGTCCTT +
Preference number: 6 (lower is better)
Translates to: VLAQLGLRGATL*SSSLLDKLIVL
Trigger: AAGGACTATCAGCTTGTCCAGAAGGGAGGAGGACAAGAGTGTGGCACCTCTCAGTCCCAGCTGAGCCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp GTGCTGGGAGTACTGGCTCAGCTGGGACTGAGAGGTGCCACACTCTaGTCCTCCTCCCTTCTGGACAAGCTGATAGTCCTTCACTGTTTT +
Preference number: 6 (lower is better)
Translates to: VLGVLAQLGLRGATL*SSSLLDKLIVLHCF
Trigger: AAAACAGTGAAGGACTATCAGCTTGTCCAGAAGGGAGGAGGACAAGAGTGTGGCACCTCTCAGTCCCAGCTGAGCCAGTACTCCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp ATCTCTAGGTCTCGGAGGAGCCAGGTTTTACTGAAGCCGGTCCCTTaGCTGCACTTCTTCACCAGCAGCTTTAGCAGATCGGTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ISRSRRSQVLLKPVP*LHFFTSSFSRSVWR
Trigger: CCTCCAGACCGATCTGCTAAAGCTGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCCTCCGAGACCTAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TCAGCTCCCCCTGAAGATTGGCTCCACTGGAGTTCTTaGGGGCCTCCAGCATATTCTCAGCATCAACTGTCC +
Preference number: 6 (lower is better)
Translates to: SAPPEDWLHWSS*GPPAYSQHQLS
Trigger: GGACAGTTGATGCTGAGAATATGCTGGAGGCCCTCAAGAACTCCAGTGGAGCCAATCTTCAGGGGGAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CCACTCGGAGGTTGTGCTTGGCTGAAAGGACCTTCATaGCTGCAGCATCTACTTCTGCTGGCTGAAGACGGA +
Preference number: 6 (lower is better)
Translates to: PLGGCAWLKGPS*LQHLLLLAEDG
Trigger: TCCGTCTTCAGCCAGCAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTCCGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
CDS GCA 72 bp CTGCTGTGGCATGTAGCTCTGGTCAGTGGCAGCCACTaGAATGGACAGATGCCTAAGCACAACATCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LLWHVALVSGSH*NGQMPKHNIWL
Trigger: AAGCCAGATGTTGTGCTTAGGCATCTGTCCATTGCAGTGGCTGCCACTGACCAGAGCTACATGCCACAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp TATTCTCTGTGTCCCTTCTACAGTGGGCATAGAGGATaGTTTGTTCCGCTTCTGCCCTTGCAGGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: YSLCPFYSGHRG*FVPLLPLQAGG
Trigger: ACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGCATCCTCTATGCCCACTGTAGAAGGGACACAGAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CACCAAGGAAGCAAGTCTTGCAGAGGTCCATGTCACTaGACTGTAGACATCGGTATCGATGCCAGGGGGCAA +
Preference number: 6 (lower is better)
Translates to: HQGSKSCRGPCH*TVDIGIDARGQ
Trigger: TTGCCCCCTGGCATCGATACCGATGTCTACAGTGCAGTGACATGGACCTCTGCAAGACTTGCTTCCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GGCCACACCCACCAGCCATTCCCAGATCTTGCCCAATaGGAGGTGAGGTACAACCCTTTCTTCAGACAACAT +
Preference number: 6 (lower is better)
Translates to: GHTHQPFPDLAQ*EVRYNPFFRQH
Trigger: ATGTTGTCTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CTTAAGCCTTGCACGCCCAACCGTTCAGCTGACTCCTaGCGGGTGCAGAGGAACTTCACCATCAAGAATTTG +
Preference number: 6 (lower is better)
Translates to: LKPCTPNRSADS*RVQRNFTIKNL
Trigger: CAAATTCTTGATGGTGAAGTTCCTCTGCACCCGCCAGGAGTCAGCTGAACGGTTGGGCGTGCAAGGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp AAATCAGCTTCTGGGTCACAGGATTTGATTCAGGAGTaGCTTGGTCAGAGCGTGCAGGCCGGGACAAGCATG +
Preference number: 6 (lower is better)
Translates to: KSASGSQDLIQE*LGQSVQAGTSM
Trigger: CATGCTTGTCCCGGCCTGCACGCTCTGACCAAGCCACTCCTGAATCAAATCCTGTGACCCAGAAGCTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp ACAGCCTTCCTCAGTGTTGCATTGCACCTCCATTCCTaGTTCCTCCATGAACTGACAGGCAGCCAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: TAFLSVALHLHS*FLHELTGSQGH
Trigger: ATGGCCTTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAATGCAACACTGAGGAAGGCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069395.7
CDS CCA 72 bp AAGGCTGAAGAGCAGGTGGGTGGTCTTCCAGCCATCTaGCACAACAGCATTGTCTGCTGTGGCAAACAGGTT +
Preference number: 6 (lower is better)
Translates to: KAEEQVGGLPAI*HNSIVCCGKQV
Trigger: AACCTGTTTGCCACAGCAGACAATGCTGTTGTGCCAGATGGCTGGAAGACCACCCACCTGCTCTTCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS CAA 72 bp TGGGGGAAGCCGACAAGCACCAGCAGAGTGAAGATGTaGGTGTGCTTCAGTTGGAATGGCAGCTGCTTGATG +
Preference number: 6 (lower is better)
Translates to: WGKPTSTSRVKM*VCFSWNGSCLM
Trigger: CATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTCGGCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TCTCGGAGGAGCCAGGTTTTACTGAAGCCGGTCCCTTaGCTGCACTTCTTCACCAGCAGCTTTAGCAGATCG +
Preference number: 6 (lower is better)
Translates to: SRRSQVLLKPVP*LHFFTSSFSRS
Trigger: CGATCTGCTAAAGCTGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCCTCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp ATACTGCCATGTTACTGCCTAACTGATGCACTGACTTaGGTGCCATGCACTGGGAAGCAAGGCGCCCCATCA +
Preference number: 6 (lower is better)
Translates to: ILPCYCLTDALT*VPCTGKQGAPS
Trigger: TGATGGGGCGCCTTGCTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGTTAGGCAGTAACATGGCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GTTTCATTCAGGTGGCCTGCGTTGGAGATGACCACCTaGAACATGAGTGGGAGGACGTGCTCCAGATCTATC +
Preference number: 6 (lower is better)
Translates to: VSFRWPALEMTT*NMSGRTCSRSI
Trigger: GATAGATCTGGAGCACGTCCTCCCACTCATGTTTCAGGTGGTCATCTCCAACGCAGGCCACCTGAATGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp ACAGAATCTCTAGGTCTCGGAGGAGCCAGGTTTTACTaGAGCCGGTCCCTTTGCTGCACTTCTTCACCAGCA +
Preference number: 6 (lower is better)
Translates to: TESLGLGGARFY*SRSLCCTSSPA
Trigger: TGCTGGTGAAGAAGTGCAGCAAAGGGACCGGCTTCAGTAAAACCTGGCTCCTCCGAGACCTAGAGATTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TTCTGTTGCGACCCGCTGAAGTTGTGCCGGTCCTGCTaGAAGTCACTACTGCTGGACATGGCTAGTTCATCA +
Preference number: 6 (lower is better)
Translates to: FCCDPLKLCRSC*KSLLLDMASSS
Trigger: TGATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CCCACCAGCCATTCCCAGATCTTGCCCAATGCGAGGTaGGGTACAACCCTTTCTTCAGACAACATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PTSHSQILPNAR*GTTLSSDNICF
Trigger: GAAGCAGATGTTGTCTGAAGAAAGGGTTGTACCTCACCTCGCATTGGGCAAGATCTGGGAATGGCTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CTCCTTCCCATCCTTGTGTGGGTGAGTGGGCCAGCTTaGTTCCAATTCCAACTCTGGACAAATCTGATGCCT +
Preference number: 6 (lower is better)
Translates to: LLPILVWVSGPA*FQFQLWTNLMP
Trigger: AGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACCCACACAAGGATGGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp AGGTCCATGTCACTGCACTGTAGACATCGGTATCGATaGCAGGGGGCAATCTCATCACACCCATCACAAGAG +
Preference number: 6 (lower is better)
Translates to: RSMSLHCRHRYR*QGAISSHPSQE
Trigger: CTCTTGTGATGGGTGTGATGAGATTGCCCCCTGGCATCGATACCGATGTCTACAGTGCAGTGACATGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CTTTCCTTTTGCTGCATCAGGTCATGGGAAAGCTGCTaGATGAACTGCAGAGTCCTAAGAAGCAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LSFCCIRSWESC*MNCRVLRSRVA
Trigger: GGCCACCCTGCTTCTTAGGACTCTGCAGTTCATCCAGCAGCTTTCCCATGACCTGATGCAGCAAAAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GTGTGCTTCAGTTGGAATGGCAGCTGCTTGATGCAGTaGTCTGTGAAGGTGGCAATGACATCTCGCCACAAC +
Preference number: 6 (lower is better)
Translates to: VCFSWNGSCLMQ*SVKVAMTSRHN
Trigger: GTTGTGGCGAGATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CAGCAGAGTGAAGATGTTGGTGTGCTTCAGTTGGAATaGCAGCTGCTTGATGCAGTGGTCTGTGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: QQSEDVGVLQLE*QLLDAVVCEGG
Trigger: GCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TGTGCCGGTCCTGCTGAAAGTCACTACTGCTGGACATaGCTAGTTCATCACAGCCTTCCTCAGTGTTGCACT +
Preference number: 6 (lower is better)
Translates to: CAGPAESHYCWT*LVHHSLPQCCT
Trigger: AGTGCAACACTGAGGAAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGCAGGACCGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AAGTCCATGACATCCTTCAGCACCGGGTATTTCTCCTaGACTGTGGGGACTGGCCTGGTCTCTTCCATGGAT +
Preference number: 6 (lower is better)
Translates to: KSMTSFSTGYFS*TVGTGLVSSMD
Trigger: ATCCATGGAAGAGACCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGGTGCTGAAGGATGTCATGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp ATGAATATTCTCTGTGTCCCTTCTACAGTGGGCATAGAGGATGCTTaGTTCCGCTTCTGCCCTTGCAGGCCGGAGGTACCCACTGATGCT +
Preference number: 6 (lower is better)
Translates to: MNILCVPSTVGIEDA*FRFCPCRPEVPTDA
Trigger: AGCATCAGTGGGTACCTCCGGCCTGCAAGGGCAGAAGCGGAACAAAGCATCCTCTATGCCCACTGTAGAAGGGACACAGAGAATATTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CAGAACAGGGAGAAGAGTACAGAACCAACTGCCCCATGGGACCGATaGAGCATCAACAATTCACACTCTCGAGCAGCAACAGAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: QNREKSTEPTAPWDR*SINNSHSRAATERR
Trigger: CCTCCTCTCTGTTGCTGCTCGAGAGTGTGAATTGTTGATGCTCAATCGGTCCCATGGGGCAGTTGGTTCTGTACTCTTCTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp GTCTGGAGTGCGATACACCAGAGCGGCAAAGGTGGCGTTCACAGCTaGATCAATAGTGGAACCAGCAACTATATCTGTCTTTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: VWSAIHQSGKGGVHS*INSGTSNYICLWGL
Trigger: CAGGCCCCAAAGACAGATATAGTTGCTGGTTCCACTATTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGGTGTATCGCACTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp GAAGCCGACAAGCACCAGCAGAGTGAAGATGTTGGTGTGCTTCAGTaGGAATGGCAGCTGCTTGATGCAGTGGTCTGTGAAGGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: EADKHQQSEDVGVLQ*EWQLLDAVVCEGGN
Trigger: ATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCTGGTGCTTGTCGGCTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CCAGGTTGCTTCCACTGCCTCGGGACAATGGCTATCCATGCTGGTTaGCAGAAGGTGACTAGCAATAAAGGCAAAGTGCTGGGAGTACTG +
Preference number: 6 (lower is better)
Translates to: PGCFHCLGTMAIHAG*QKVTSNKGKVLGVL
Trigger: CAGTACTCCCAGCACTTTGCCTTTATTGCTAGTCACCTTCTGCAAACCAGCATGGATAGCCATTGTCCCGAGGCAGTGGAAGCAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp AGCAGAGTGAAGATGTTGGTGTGCTTCAGTTGGAATGGCAGCTGCTaGATGCAGTGGTCTGTGAAGGTGGCAATGACATCTCGCCACAAC +
Preference number: 6 (lower is better)
Translates to: SRVKMLVCFSWNGSC*MQWSVKVAMTSRHN
Trigger: GTTGTGGCGAGATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCACTCTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp ATCCATATTCGAATCCCATCTGCCAGGGAATACACCTaGGAGAACTCCTCAGTCAGGGCTATCTTGCCACCG +
Preference number: 6 (lower is better)
Translates to: IHIRIPSAREYT*ENSSVRAILPP
Trigger: CGGTGGCAAGATAGCCCTGACTGAGGAGTTCTCTCAGGTGTATTCCCTGGCAGATGGGATTCGAATATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GCAAGATCACTGGGTTCCCAGCCCATATCCAAAAGATaGAGCAGGGCTGTCTGGACACAAGATAAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: ARSLGSQPISKR*SRAVWTQDKAG
Trigger: CCCTGCTTTATCTTGTGTCCAGACAGCCCTGCTTCATCTTTTGGATATGGGCTGGGAACCCAGTGATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CAGTGGTCACACGTAAACTCCATGTTAACCATTTCATaGTCGTCTCCATGGCCCTCGGGCTTCACTCCACCA +
Preference number: 6 (lower is better)
Translates to: QWSHVNSMLTIS*SSPWPSGFTPP
Trigger: TGGTGGAGTGAAGCCCGAGGGCCATGGAGACGATCATGAAATGGTTAACATGGAGTTTACGTGTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp AGGACCTTCATGACTGCAGCATCTACTTCTGCTGGCTaGAGACGGATAATTAACTGGCCCAGAAGACCCAGG +
Preference number: 6 (lower is better)
Translates to: RTFMTAASTSAG*RRIINWPRRPR
Trigger: CCTGGGTCTTCTGGGCCAGTTAATTATCCGTCTTCAGCCAGCAGAAGTAGATGCTGCAGTCATGAAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GAAGCTCAAAATCTTTCCACTTCTGTTGCGACCCGCTaGAGTTGTGCCGGTCCTGCTGAAAGTCACTACTGC +
Preference number: 6 (lower is better)
Translates to: EAQNLSTSVATR*SCAGPAESHYC
Trigger: GCAGTAGTGACTTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGATTTTGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TGGCAAACAGGTTGTGCTTGGCTGAAAGGACCTTCATaGCTGCAGCATCTACTTCTGCTGGCTGAAGACGGA +
Preference number: 6 (lower is better)
Translates to: WQTGCAWLKGPS*LQHLLLLAEDG
Trigger: TCCGTCTTCAGCCAGCAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTGTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS GCA 72 bp CCACTTTCCTTTTGCTGCATCAGGTCATGGGAAAGCTaGTGGATGAACTGCAGAGTCCTAAGAAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: PLSFCCIRSWES*WMNCRVLRSRV
Trigger: CACCCTGCTTCTTAGGACTCTGCAGTTCATCCAGCAGCTTTCCCATGACCTGATGCAGCAAAAGGAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GCTGCTTGGCATAGCTCTGCTGTAGCTCGCTCTCTGTaGTGGAAATCAGCTTCTGGGTCACAGGATTTGATT +
Preference number: 6 (lower is better)
Translates to: AAWHSSAVARSL*WKSASGSQDLI
Trigger: AATCAAATCCTGTGACCCAGAAGCTGATTTCCAGCACAGAGAGCGAGCTACAGCAGAGCTATGCCAAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TCGTGCTCAGTGACACTCTTCATCATGGTGAAGAGCTaGCTTCTCCGGGTCTGTCGATCAGGAAAGAAGATG +
Preference number: 6 (lower is better)
Translates to: SCSVTLFIMVKS*LLRVCRSGKKM
Trigger: CATCTTCTTTCCTGATCGACAGACCCGGAGAAGCCAGCTCTTCACCATGATGAAGAGTGTCACTGAGCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TCTGTGAGGGTGCTGAACTCTCTTAGGAGTGTGCAGTaGGACACGTCTAAAGTGCAGAAGTCTAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SVRVLNSLRSVQ*DTSKVQKSSRK
Trigger: CTTCCTGCTAGACTTCTGCACTTTAGACGTGTCCCACTGCACACTCCTAAGAGAGTTCAGCACCCTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TGTGCCGGTCCTGCTGAAAGTCACTACTGCTGGACATaGCTAGTTCATCACAGCCTTCCTCAGTGTTGCATT +
Preference number: 6 (lower is better)
Translates to: CAGPAESHYCWT*LVHHSLPQCCI
Trigger: AATGCAACACTGAGGAAGGCTGTGATGAACTAGCCATGTCCAGCAGTAGTGACTTTCAGCAGGACCGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069395.7
CDS CCA 72 bp CTAACACTCAACATTCCAGAGGCGGGTGGCCTTGTTTaGGTAGTTGATGGCCAGGCTGATAGCAGCAATGTT +
Preference number: 6 (lower is better)
Translates to: LTLNIPEAGGLV*VVDGQADSSNV
Trigger: AACATTGCTGCTATCAGCCTGGCCATCAACTACCCAAACAAGGCCACCCGCCTCTGGAATGTTGAGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TCTTCCAGCCATCTGGCACAACAGCATTGTCTGCTGTaGCAAACAGGTTGTGCTTGGCTGAAAGGACCTTCA +
Preference number: 6 (lower is better)
Translates to: SSSHLAQQHCLL*QTGCAWLKGPS
Trigger: TGAAGGTCCTTTCAGCCAAGCACAACCTGTTTGCCACAGCAGACAATGCTGTTGTGCCAGATGGCTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS CAA 72 bp GTCGATGAAACCTGGAACAAGAGAGCAGGCTTGCAGTaGTCTGATGACATGGCTCAGCTCCCCCTGAAGATT +
Preference number: 6 (lower is better)
Translates to: VDETWNKRAGLQ*SDDMAQLPLKI
Trigger: AATCTTCAGGGGGAGCTGAGCCATGTCATCAGACAACTGCAAGCCTGCTCTCTTGTTCCAGGTTTCATCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp AGTTTTGCCTGGGATACTGCCATGTTACTGCCTAACTaGTGCACTGACTTGAGTGCCATGCACTGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SFAWDTAMLLPN*CTDLSAMHWEA
Trigger: TGCTTCCCAGTGCATGGCACTCAAGTCAGTGCATCAGTTAGGCAGTAACATGGCAGTATCCCAGGCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TCTGATGCCTGGAAGGACACTGTGACTGGCAGGGCTTaGTTTTCTGAGGTAGAGTCACCATCTGGCAATACA +
Preference number: 6 (lower is better)
Translates to: SDAWKDTVTGRA*FSEVESPSGNT
Trigger: TGTATTGCCAGATGGTGACTCTACCTCAGAAAATCAAGCCCTGCCAGTCACAGTGTCCTTCCAGGCATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TGGAGTAATCGCCTTCTCTTCTACCAGTACCTGAGCTaGCACTTCTGGATGTTCAGCATCTGGAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WSNRLLFYQYLS*HFWMFSIWKSW
Trigger: CCAGGACTTCCAGATGCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGAGAAGGCGATTACTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp AGCATTGTCTGCTGTGGCAAACAGGTTGTGCTTGGCTaGAAGGACCTTCATGACTGCAGCATCTACTTCTGC +
Preference number: 6 (lower is better)
Translates to: SIVCCGKQVVLG*KDLHDCSIYFC
Trigger: GCAGAAGTAGATGCTGCAGTCATGAAGGTCCTTTCAGCCAAGCACAACCTGTTTGCCACAGCAGACAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207107.2
CDS GCA 72 bp GCTTCATCTTCAAACGTATCCAGTGTGAGCGCGCACTaGCATCTGACTGCCAGTAGGATGATGTTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: ASSSNVSSVSAH*HLTASRMMFLH
Trigger: ATGGAGAAACATCATCCTACTGGCAGTCAGATGGCAGTGCGCGCTCACACTGGATACGTTTGAAGATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CACAGACCAGAACAGGGAGAAGAGTACAGAACCAACTaGCCCATGGGACCGATTGAGCATCAACAATTCACA +
Preference number: 6 (lower is better)
Translates to: HRPEQGEEYRTN*PMGPIEHQQFT
Trigger: TGTGAATTGTTGATGCTCAATCGGTCCCATGGGGCAGTTGGTTCTGTACTCTTCTCCCTGTTCTGGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GTGAAGATGTTGGTGTGCTTCAGTTGGAATGGCAGCTaGTTGATGCAGTGGTCTGTGAAGGTGGCAATGACA +
Preference number: 6 (lower is better)
Translates to: VKMLVCFSWNGS*LMQWSVKVAMT
Trigger: TGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CAGCTGCATGAACATATCCAGAATGTAGGTCATATGTaGAGGGCCACTAAGCTCCAGGATGTCCTCACTCAC +
Preference number: 6 (lower is better)
Translates to: QLHEHIQNVGHM*RATKLQDVLTH
Trigger: GTGAGTGAGGACATCCTGGAGCTTAGTGGCCCTGCACATATGACCTACATTCTGGATATGTTCATGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TGGGTGAGTGGGCCAGCTTGCTTCCAATTCCAACTCTaGACAAATCTGATGCCTGAAGACAGGTTTCCACAA +
Preference number: 6 (lower is better)
Translates to: WVSGPACFQFQL*TNLMPEDRFPQ
Trigger: TTGTGGAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAAGCTGGCCCACTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AAATATGTCGATGAAACCTGGAACAAGAGAGCAGGCTaGCAGTTGTCTGATGACATGGCTCAGCTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: KYVDETWNKRAG*QLSDDMAQLPL
Trigger: CAGGGGGAGCTGAGCCATGTCATCAGACAACTGCAAGCCTGCTCTCTTGTTCCAGGTTTCATCGACATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GTGCAGAGTGAATGGAAAGTGAGTTGCAGAGACTGCTaGCGTTCGTGCTCAGTGACACTCTTCATCATGGTG +
Preference number: 6 (lower is better)
Translates to: VQSEWKVSCRDC*RSCSVTLFIMV
Trigger: CACCATGATGAAGAGTGTCACTGAGCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp ATGCTGAACCCTGGAAATGTTCTTCCACCACAGAGCTaGTCCTCTGGCGTCTATCAAGTGGCTGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: MLNPGNVLPPQS*SSGVYQVAGDD
Trigger: ATCATCTCCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAAGAACATTTCCAGGGTTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TTCCACTGCCTCGGGACAATGGCTATCCATGCTGGTTaGCAGAAGGTGACTAGCAATAAAGGCAAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: FHCLGTMAIHAG*QKVTSNKGKVL
Trigger: CAGCACTTTGCCTTTATTGCTAGTCACCTTCTGCAAACCAGCATGGATAGCCATTGTCCCGAGGCAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AGTATCTCCTGGAAGCTCAAAATCTTTCCACTTCTGTaGCGACCCGCTGAAGTTGTGCCGGTCCTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SISWKLKIFPLL*RPAEVVPVLLK
Trigger: TTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGATTTTGAGCTTCCAGGAGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TCTTTAATGAAGTCCATGACATCCTTCAGCACCGGGTATTTCTCCTaGACTGTGGGGACTGGCCTGGTCTCTTCCATGGATCTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SLMKSMTSFSTGYFS*TVGTGLVSSMDLKE
Trigger: CTCTTTCAGATCCATGGAAGAGACCAGGCCAGTCCCCACAGTCAAGGAGAAATACCCGGTGCTGAAGGATGTCATGGACTTCATTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TGCCAGCAATCCCAAAATCCTCTTCTGGGAACACTCTGCAAACACTaGCTCAGGGTTTGGAGTAATCGCCTTCTCTTCTACCAGTACCTG +
Preference number: 6 (lower is better)
Translates to: CQQSQNPLLGTLCKH*LRVWSNRLLFYQYL
Trigger: CAGGTACTGGTAGAAGAGAAGGCGATTACTCCAAACCCTGAGCAAGTGTTTGCAGAGTGTTCCCAGAAGAGGATTTTGGGATTGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GGGATGAGGCGTCATACTGTGTGTCCAAGTGGTCAGTaGTGGTACACAGAGAGCTCATTACTTTGGCAATAC +
Preference number: 6 (lower is better)
Translates to: GMRRHTVCPSGQ*WYTESSLLWQY
Trigger: GTATTGCCAAAGTAATGAGCTCTCTGTGTACCATCACTGACCACTTGGACACACAGTATGACGCCTCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CCAGCCAATAGGATCATCCTCTCCAAGGTCATCAGATaGGCAACCAATCCTGCTTTTTACGAACTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PANRIILSKVIR*ATNPAFYELPQ
Trigger: CTGAGGCAGTTCGTAAAAAGCAGGATTGGTTGCTCATCTGATGACCTTGGAGAGGATGATCCTATTGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GGCCAGCTTGCTTCCAATTCCAACTCTGGACAAATCTaGTGCCTGAAGACAGGTTTCCACAATGGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: GQLASNSNSGQI*CLKTGFHNGEF
Trigger: GAACTCTCCATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAAGCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GAGCTTGTCCTCTGGCGTCTATCAAGTGGCTGGAGATaGTCAGTTTCATCGACAGTTTCCAACTTGTCACAG +
Preference number: 6 (lower is better)
Translates to: ELVLWRLSSGWR*SVSSTVSNLSQ
Trigger: CTGTGACAAGTTGGAAACTGTCGATGAAACTGATCATCTCCAGCCACTTGATAGACGCCAGAGGACAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GGGTTTGGAGTAATCGCCTTCTCTTCTACCAGTACCTaGGCTGACACTTCTGGATGTTCAGCATCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: GFGVIAFSSTST*ADTSGCSASGS
Trigger: ACTTCCAGATGCTGAACATCCAGAAGTGTCAGCTCAGGTACTGGTAGAAGAGAAGGCGATTACTCCAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CATCCTCTCCAAGGTCATCAGATGAGCAACCAATCCTaGTTTTTACGAACTGCCTCAGTTCCTGGAGTTTCC +
Preference number: 6 (lower is better)
Translates to: HPLQGHQMSNQS*FLRTASVPGVS
Trigger: GGAAACTCCAGGAACTGAGGCAGTTCGTAAAAAGCAGGATTGGTTGCTCATCTGATGACCTTGGAGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CATGGCAGTTATTTTCATAGTTGTGGGTGGATTCCTTaGTCCAGGTATGCAATACCACAGGCTGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: HGSYFHSCGWIP*SRYAIPQAAPA
Trigger: AGCAGGAGCAGCCTGTGGTATTGCATACCTGGACCAAGGAATCCACCCACAACTATGAAAATAACTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TTCCACCACAGAGCTTGTCCTCTGGCGTCTATCAAGTaGCTGGAGATGATCAGTTTCATCGACAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: FHHRACPLASIK*LEMISFIDSFQ
Trigger: TTGGAAACTGTCGATGAAACTGATCATCTCCAGCCACTTGATAGACGCCAGAGGACAAGCTCTGTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TGCCATCTGACTGCCAGTAGGATGATGTTTCTCCATTaGTCATCCTGTATATGTCTGCAGGGTTGGAGGACG +
Preference number: 6 (lower is better)
Translates to: CHLTASRMMFLH*SSCICLQGWRT
Trigger: CGTCCTCCAACCCTGCAGACATATACAGGATGACAAATGGAGAAACATCATCCTACTGGCAGTCAGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GCGATACACCAGAGCGGCAAAGGTGGCGTTCACAGCTaGATCAATAGTGGAACCAGCAACTATATCTGTCTT +
Preference number: 6 (lower is better)
Translates to: AIHQSGKGGVHS*INSGTSNYICL
Trigger: AAGACAGATATAGTTGCTGGTTCCACTATTGATCAAGCTGTGAACGCCACCTTTGCCGCTCTGGTGTATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AAGATGTTGGTGTGCTTCAGTTGGAATGGCAGCTGCTaGATGCAGTGGTCTGTGAAGGTGGCAATGACATCT +
Preference number: 6 (lower is better)
Translates to: KMLVCFSWNGSC*MQWSVKVAMTS
Trigger: AGATGTCATTGCCACCTTCACAGACCACTGCATCAAGCAGCTGCCATTCCAACTGAAGCACACCAACATCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp AGCGCGCACTGCCATCTGACTGCCAGTAGGATGATGTTTCTCCATTaGTCATCCTGTATATGTCTGCAGGGTTGGAGGACGTTTCTATAT +
Preference number: 6 (lower is better)
Translates to: SAHCHLTASRMMFLH*SSCICLQGWRTFLY
Trigger: ATATAGAAACGTCCTCCAACCCTGCAGACATATACAGGATGACAAATGGAGAAACATCATCCTACTGGCAGTCAGATGGCAGTGCGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp GTAATACAGAGTATCTCCTGGAAGCTCAAAATCTTTCCACTTCTGTaGCGACCCGCTGAAGTTGTGCCGGTCCTGCTGAAAGTCACTACT +
Preference number: 6 (lower is better)
Translates to: VIQSISWKLKIFPLL*RPAEVVPVLLKVTT
Trigger: AGTAGTGACTTTCAGCAGGACCGGCACAACTTCAGCGGGTCGCAACAGAAGTGGAAAGATTTTGAGCTTCCAGGAGATACTCTGTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CTCAAAGCTGGTGTTGTTGTTATAGGGATGTTTAGATTCCCTCACTaGCACCTCCATTCCTGGTTCCTCCATGAACTGACAGGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: LKAGVVVIGMFRFPH*HLHSWFLHELTGSQ
Trigger: TTGGCTGCCTGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAAACATCCCTATAACAACAACACCAGCTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp TGTGTGTCCAAGTGGTCAGTGATGGTACACAGAGAGCTCATTACTTaGGCAATACTTCCTCTTGCTAGTGCAAAAGCCAGAAGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: CVSKWSVMVHRELIT*AILPLASAKARRVS
Trigger: GCTGACTCTTCTGGCTTTTGCACTAGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTCTGTGTACCATCACTGACCACTTGGACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp CTAAAATATGTGCAGAGTGAATGGAAAGTGAGTTGCAGAGACTGCTaGCGTTCGTGCTCAGTGACACTCTTCATCATGGTGAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LKYVQSEWKVSCRDC*RSCSVTLFIMVKSW
Trigger: CCAGCTCTTCACCATGATGAAGAGTGTCACTGAGCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCACATATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp TATGTGCAGAGTGAATGGAAAGTGAGTTGCAGAGACTaGTTGCGTTCGTGCTCAGTGACACTCTTCATCATG +
Preference number: 6 (lower is better)
Translates to: YVQSEWKVSCRD*LRSCSVTLFIM
Trigger: CATGATGAAGAGTGTCACTGAGCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TCCCAAAATCCTCTTCTGGGAACACTCTGCAAACACTaGCTCAGGGTTTGGAGTAATCGCCTTCTCTTCTAC +
Preference number: 6 (lower is better)
Translates to: SQNPLLGTLCKH*LRVWSNRLLFY
Trigger: GTAGAAGAGAAGGCGATTACTCCAAACCCTGAGCAAGTGTTTGCAGAGTGTTCCCAGAAGAGGATTTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CGATTGCGATGCAGGAAGCGCAATATCATTGATGAGTaGATGCCAAGGCCCTCCTTTGACTCTGAAAATATG +
Preference number: 6 (lower is better)
Translates to: RLRCRKRNIIDE*MPRPSFDSENM
Trigger: CATATTTTCAGAGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGATATTGCGCTTCCTGCATCGCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TTGCTTCCAATTCCAACTCTGGACAAATCTGATGCCTaGAGACAGGTTTCCACAATGGAGAGTTCAGGACTG +
Preference number: 6 (lower is better)
Translates to: LLPIPTLDKSDA*RQVSTMESSGL
Trigger: CAGTCCTGAACTCTCCATTGTGGAAACCTGTCTTCAGGCATCAGATTTGTCCAGAGTTGGAATTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CAAAACCATGAGCCTTTAGTGTTTTATATAAACCTTTaGGAGCCAGGGACAGGACCCAGGTTGCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: QNHEPLVFYINL*EPGTGPRLLPL
Trigger: CAGTGGAAGCAACCTGGGTCCTGTCCCTGGCTCTCAAAGGTTTATATAAAACACTAAAGGCTCATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp TGCGATGCAGGAAGCGCAATATCATTGATGAGTGAATaGCAAGGCCCTCCTTTGACTCTGAAAATATGTCGA +
Preference number: 6 (lower is better)
Translates to: CDAGSAISLMSE*QGPPLTLKICR
Trigger: TCGACATATTTTCAGAGTCAAAGGAGGGCCTTGGCATTCACTCATCAATGATATTGCGCTTCCTGCATCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp CTGTGCAATACTGAATTATCCTCAGGACTTCAAGTATaGTCTGCCCTTGGGCTTTCCGCAAAGAAAGAACCT +
Preference number: 6 (lower is better)
Translates to: LCNTELSSGLQV*SALGLSAKKEP
Trigger: AGGTTCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGAGGATAATTCAGTATTGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp CCTGGATCCTTATCACTAAAATATGTGCAGAGTGAATaGAAAGTGAGTTGCAGAGACTGCTTGCGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: PGSLSLKYVQSE*KVSCRDCLRSC
Trigger: GCACGAACGCAAGCAGTCTCTGCAACTCACTTTCCATTCACTCTGCACATATTTTAGTGATAAGGATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp CTGTCACCAAAGATGTCAGCAGAGACCAATACCATATaGCAGAGGCATCAGAGACAGAGACTCCAGATTTCT +
Preference number: 6 (lower is better)
Translates to: LSPKMSAETNTI*QRHQRQRLQIS
Trigger: AGAAATCTGGAGTCTCTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTCTGCTGACATCTTTGGTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GTTTCCACAATGGAGAGTTCAGGACTGAAGTCAGTTTaGCCTGGGATACTGCCATGTTACTGCCTAACTGAT +
Preference number: 6 (lower is better)
Translates to: VSTMESSGLKSV*PGILPCYCLTD
Trigger: ATCAGTTAGGCAGTAACATGGCAGTATCCCAGGCAAAACTGACTTCAGTCCTGAACTCTCCATTGTGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp CTGAATTATCCTCAGGACTTCAAGTATGCTCTGCCCTaGGGCTTTCCGCAAAGAAAGAACCTTCACAACACT +
Preference number: 6 (lower is better)
Translates to: LNYPQDFKYALP*GFPQRKNLHNT
Trigger: AGTGTTGTGAAGGTTCTTTCTTTGCGGAAAGCCCAAGGGCAGAGCATACTTGAAGTCCTGAGGATAATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp GGTGTTGTTGTTATAGGGATGTTTAGATTCCCTCACTaGCACCTCCATTCCTGGTTCCTCCATGAACTGACA +
Preference number: 6 (lower is better)
Translates to: GVVVIGMFRFPH*HLHSWFLHELT
Trigger: TGTCAGTTCATGGAGGAACCAGGAATGGAGGTGCAAGTGAGGGAATCTAAACATCCCTATAACAACAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 90 bp AGGAACTTCACCATCAAGAATTTGGCAACTCTGCACTGTTGTAACTaGACATCTGCTTCATCCCACTCTTCTTCTAGCTCAAACCAGCCA +
Preference number: 6 (lower is better)
Translates to: RNFTIKNLATLHCCN*TSASSHSSSSSNQP
Trigger: TGGCTGGTTTGAGCTAGAAGAAGAGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAGAGTTGCCAAATTCTTGATGGTGAAGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CCTTTGAAAAGTTCTGAATATGGCCCACAGAAGTTCTaGGCAGGCTCTGACTGGGCAAAATCAAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: PLKSSEYGPQKF*AGSDWAKSRRK
Trigger: TTTTCTCCTTGATTTTGCCCAGTCAGAGCCTGCTCAGAACTTCTGTGGGCCATATTCAGAACTTTTCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp GCCTTCCTCAGTGTTGCACTGAGGGTCAAATTTGATTaGGAGGTAGATTGCACCAGGAATGTGAACTTTATC +
Preference number: 6 (lower is better)
Translates to: AFLSVALRVKFD*EVDCTRNVNFI
Trigger: GATAAAGTTCACATTCCTGGTGCAATCTACCTCTCAATCAAATTTGACCCTCAGTGCAACACTGAGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GATCCAGAGACTCCTTCAGAACTGATGATCTCATGGTaGACATGTTATTACAGTGGTCTAACATTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: DPETPSELMISW*TCYYSGLTLGR
Trigger: CCTACCCAATGTTAGACCACTGTAATAACATGTGCACCATGAGATCATCAGTTCTGAAGGAGTCTCTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp TGTCACCAAAGATGTCAGCAGAGACCAATACCATATTaGAGAGGCATCAGAGACAGAGACTCCAGATTTCTT +
Preference number: 6 (lower is better)
Translates to: CHQRCQQRPIPY*RGIRDRDSRFL
Trigger: AAGAAATCTGGAGTCTCTGTCTCTGATGCCTCTGCAATATGGTATTGGTCTCTGCTGACATCTTTGGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp AAGTGGTCAGTGATGGTACACAGAGAGCTCATTACTTaGGCAATACTTCCTCTTGCTAGTGCAAAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: KWSVMVHRELIT*AILPLASAKAR
Trigger: TCTGGCTTTTGCACTAGCAAGAGGAAGTATTGCCAAAGTAATGAGCTCTCTGTGTACCATCACTGACCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp AGATCTCCAGGGCTTTCCTTTTCTTTTTGTACCAGTTaGTCCAGAGACTCCTTCAGAACTGATGATCTCATG +
Preference number: 6 (lower is better)
Translates to: RSPGLSFSFCTS*SRDSFRTDDLM
Trigger: CATGAGATCATCAGTTCTGAAGGAGTCTCTGGATCAACTGGTACAAAAAGAAAAGGAAAGCCCTGGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp CCATCAAGAATTTGGCAACTCTGCACTGTTGTAACTTaGCATCTGCTTCATCCCACTCTTCTTCTAGCTCAA +
Preference number: 6 (lower is better)
Translates to: PSRIWQLCTVVT*HLLHPTLLLAQ
Trigger: TTGAGCTAGAAGAAGAGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAGAGTTGCCAAATTCTTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS TCA 72 bp TTTTCTTGGGACATGTTCATGAGGAGATCTGGTAACTaGATGTCAACAAAGAAGGCAAGATCACTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: FSWDMFMRRSGN*MSTKKARSLGS
Trigger: GGAACCCAGTGATCTTGCCTTCTTTGTTGACATTCAGTTACCAGATCTCCTCATGAACATGTCCCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS GCA 72 bp GCTGTGAGTTGGCAAATGGCCATAGGAGTATTTCTTTaGTGTGTAGCATCCATAGCAAAGATCAAAGTCATC +
Preference number: 6 (lower is better)
Translates to: AVSWQMAIGVFL*CVASIAKIKVI
Trigger: GATGACTTTGATCTTTGCTATGGATGCTACACAGCAAAGAAATACTCCTATGGCCATTTGCCAACTCACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp GTTGATCCAGAGACTCCTTCAGAACTGATGATCTCATaGTGCACATGTTATTACAGTGGTCTAACATTGGGT +
Preference number: 6 (lower is better)
Translates to: VDPETPSELMIS*CTCYYSGLTLG
Trigger: ACCCAATGTTAGACCACTGTAATAACATGTGCACCATGAGATCATCAGTTCTGAAGGAGTCTCTGGATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp ACCATCAAGAATTTGGCAACTCTGCACTGTTGTAACTaGACATCTGCTTCATCCCACTCTTCTTCTAGCTCA +
Preference number: 6 (lower is better)
Translates to: TIKNLATLHCCN*TSASSHSSSSS
Trigger: TGAGCTAGAAGAAGAGTGGGATGAAGCAGATGTCAAGTTACAACAGTGCAGAGTTGCCAAATTCTTGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CAA 72 bp TGCTGTGAGTTGGCAAATGGCCATAGGAGTATTTCTTaGCTGTGTAGCATCCATAGCAAAGATCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: CCELANGHRSIS*LCSIHSKDQSH
Trigger: ATGACTTTGATCTTTGCTATGGATGCTACACAGCAAAGAAATACTCCTATGGCCATTTGCCAACTCACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2
CDS CCA 72 bp TTGATCAATAGTGGAACCAGCAACTATATCTGTCTTTaGGGCCTGTTTTCTACATGCCTGTATGAATCCTTT +
Preference number: 6 (lower is better)
Translates to: LINSGTSNYICL*GLFSTCLYESF
Trigger: AAAGGATTCATACAGGCATGTAGAAAACAGGCCCCAAAGACAGATATAGTTGCTGGTTCCACTATTGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069395.7
ENSMUST00000172220.8
ENSMUST00000207107.2