Pregenerated sensors for ZXDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034430Ensembl transcript IDs: ENSMUST00000045740.8, ENSMUST00000075117.10, ENSMUST00000113539.8, ENSMUST00000203493.2
Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTTCTCTGTGGGGTaGGCTCTGGAGGCAGGCGACAGTGGTACCAGGCTGCCTACTGAG | + |
Preference number: 1 (lower is better) Translates to: HAGGCGSCWSNFSVG*ALEAGDSGTRLPTE Trigger: CTCAGTAGGCAGCCTGGTACCACTGTCGCCTGCCTCCAGAGCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CCA 90 bp | GAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCTaGAGGCTGTGGGAGCTGCTGGAGCAACTTCTCTGTGGGGTGGGC | + |
Preference number: 1 (lower is better) Translates to: ELRAQQPILSLADTR*RLWELLEQLLCGVG Trigger: GCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR GCA 90 bp | GCAGGAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTaGAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTTCT | + |
Preference number: 1 (lower is better) Translates to: AGSSRAQSTTAHPVT*RHTLEAVGAAGATS Trigger: AGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR GCA 90 bp | CAGGACTCACCAGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTaGAGAAGGGACAGCAGACGAGGCTATAGACTTAACTGCTCCACA | + |
Preference number: 1 (lower is better) Translates to: QDSPVSSQYLHLHAM*RRDSRRGYRLNCST Trigger: TGTGGAGCAGTTAAGTCTATAGCCTCGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACTGGTGAGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CCA 90 bp | GACCCTGTTTGGACCCTTGATTTCCCGAGGGCCTCTCAGACCTGTTaGGCATGTTCAGACATGCTGGTGATTTGGTTGCTACCTGTTTTC | + |
Preference number: 1 (lower is better) Translates to: DPVWTLDFPRASQTC*ACSDMLVIWLLPVF Trigger: GAAAACAGGTAGCAACCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAAATCAAGGGTCCAAACAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR GCA 90 bp | CAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTaGACACCAGAAAGAACCGTCTGCATAGACAGGATTCATCCCCAA | + |
Preference number: 1 (lower is better) Translates to: QSQASRLLPRLHLSF*TPERTVCIDRIHPQ Trigger: TTGGGGATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR CCA 90 bp | AAAACACCACATCTTCTTGATGCCAGGGTTATGTCTCAGCAGCCCTaGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCTGCCAATACA | + |
Preference number: 1 (lower is better) Translates to: KTPHLLDARVMSQQP*AVLAASATLSSANT Trigger: TGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCTGGCATCAAGAAGATGTGGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR GCA 90 bp | AATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTaGCCAGGCTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCT | + |
Preference number: 1 (lower is better) Translates to: NVNSRLKVKVRLPDY*PGSICPSAHQKEPS Trigger: AGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR CCA 90 bp | ATCTTCTTGATGCCAGGGTTATGTCTCAGCAGCCCTGGGCAGTGTTaGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTA | + |
Preference number: 1 (lower is better) Translates to: IFLMPGLCLSSPGQC*QQVPHCHLPIQKVL Trigger: TAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCTGGCATCAAGAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CCA 90 bp | TTTGCACATAACATTCGAACACTTTTATTCATTTGCACTAAGGACTaGGCCTATGGCAGCAGGAAGCTCCAGAGCTCAGAGCACAACAGC | + |
Preference number: 1 (lower is better) Translates to: FAHNIRTLLFICTKD*AYGSRKLQSSEHNS Trigger: GCTGTTGTGCTCTGAGCTCTGGAGCTTCCTGCTGCCATAGGCCCAGTCCTTAGTGCAAATGAATAAAAGTGTTCGAATGTTATGTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CCA 90 bp | CAGAGGGCAACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACTaGCTCTTGCTGGAACAGAATCAAAGTACTTTCAATATGTGTACC | + |
Preference number: 1 (lower is better) Translates to: QRATCGGSFKEYSPN*LLLEQNQSTFNMCT Trigger: GGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGTTGCCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CCA 90 bp | CCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACTGGCTCTTGCTaGAACAGAATCAAAGTACTTTCAATATGTGTACCCCAAAGTCTC | + |
Preference number: 1 (lower is better) Translates to: PVEAVSKSIAQTGSC*NRIKVLSICVPQSL Trigger: GAGACTTTGGGGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR GCA 90 bp | CAACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACTGGCTCTTaGTGGAACAGAATCAAAGTACTTTCAATATGTGTACCCCAAAGT | + |
Preference number: 1 (lower is better) Translates to: QPVEAVSKSIAQTGS*WNRIKVLSICVPQS Trigger: ACTTTGGGGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR TCA 90 bp | GGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACTaGATTCAGCAAACTTATGGAGGTGCCAGAGAAAACAGTATTCAA | + |
Preference number: 1 (lower is better) Translates to: GSKCHTVICQYKKYY*IQQTYGGARENSIQ Trigger: TTGAATACTGTTTTCTCTGGCACCTCCATAAGTTTGCTGAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR GCA 90 bp | GGGAAGACCAAATCATTCTGTGAAAACACACAAGGCCACATAATATaGTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTTCCAGC | + |
Preference number: 1 (lower is better) Translates to: GKTKSFCENTQGHII*LSPTSIIKQAYCSS Trigger: GCTGGAACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAATGATTTGGTCTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR TCA 90 bp | CCTACACATAACATAAAGCATTCAGAACTCCACTGTAGAGACTGCTaGCAAGTTACTACTTACCATGAATTCCAGAAACAGAATTTAGAA | + |
Preference number: 1 (lower is better) Translates to: PTHNIKHSELHCRDC*QVTTYHEFQKQNLE Trigger: TTCTAAATTCTGTTTCTGGAATTCATGGTAAGTAGTAACTTGTCAGCAGTCTCTACAGTGGAGTTCTGAATGCTTTATGTTATGTGTAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR TCA 90 bp | AAGAATGAAGGCTCAGGAATCACTGTTATTCTAATAAAAATATCCTaGCGTAGCTTTCAAGTTCCCACTGAACTGTTAAGACGATTGAAG | + |
Preference number: 1 (lower is better) Translates to: KNEGSGITVILIKIS*RSFQVPTELLRRLK Trigger: CTTCAATCGTCTTAACAGTTCAGTGGGAACTTGAAAGCTACGTCAGGATATTTTTATTAGAATAACAGTGATTCCTGAGCCTTCATTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR-3UTR TCA 90 bp | CGTCAGACCCAAGGGGACCTGGGAAGGGCTGGAATGCATGTGCGTGCGTGCACGGCTGAGGAAGTGAAATaGGTCTCTGCCCACCCACAG | + |
Preference number: 2 (lower is better) Translates to: RQTQGDLGRAGMHVRACTAEEVK*VSAHPQ Trigger: CTGTGGGTGGGCAGAGACTCATTTCACTTCCTCAGC...CGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR TCA 90 bp | CCCGTCTGCTTTCCTGACACCGAGCCTTCTGGGCTCATTCACTCAGTAGCCTTCGCTTCCCACATGCTCTaGCCTGTGGTTACCTCCAGT | + |
Preference number: 2 (lower is better) Translates to: PVCFPDTEPSGLIHSVAFASHML*PVVTSS Trigger: ACTGGAGGTAACCACAGGTCAGAGCATGTGGGAAGC...GAAGGCTACTGAGTGAATGAGCCCAGAAGGCTCGGTGTCAGGAAAGCAGACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR CCA 90 bp | GCTGGAGGCTGTGGGAGCTGCTGGAGCAACTTCTCTGTGGGGTGGGCTCTGGAGCTCAAAGAATCAGGCTaGAGTGCTGAGGAAGTGAAA | + |
Preference number: 2 (lower is better) Translates to: AGGCGSCWSNFSVGWALELKESG*SAEEVK Trigger: TTTCACTTCCTCAGCACTCCAGCCTGATTCTTTGAG...CTCCAGAGCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | TCTCTGTGGGGTGGGCTCTGGAGGCAGGCGACAGTGGTACCAGGCTGCCTACTGTGCAGGAGAGACATGTaGAAAGGAGTCTTCTCAAGT | + |
Preference number: 2 (lower is better) Translates to: SLWGGLWRQATVVPGCLLCRRDM*KGVFSS Trigger: ACTTGAGAAGACTCCTTTCCACATGTCTCTCCTGCA...CAGTAGGCAGCCTGGTACCACTGTCGCCTGCCTCCAGAGCCCACCCCACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCAGACACAGGGAGGCATaGAGTGGCAGGGACAGGCTT | + |
Preference number: 2 (lower is better) Translates to: QRLLHTGRLHTAILEIMARHREA*SGRDRL Trigger: AAGCCTGTCCCTGCCACTCCATGCCTCCCTGTGTCT...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR TCA 90 bp | GGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGACCAGCAGCTGAGGTCTTaGAGCACAGCCTGGAATTCA | + |
Preference number: 2 (lower is better) Translates to: GSISRLLAGGRPANHLSDQQLRS*STAWNS Trigger: TGAATTCCAGGCTGTGCTTCAAGACCTCAGCTGCTG...GTCTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR TCA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTCCCACCCACAGCAGCTaGGGTCTTGAAGCACAGCCT | + |
Preference number: 2 (lower is better) Translates to: PFVGSSTQVASRENSCPVPTHSS*GLEAQP Trigger: AGGCTGTGCTTCAAGACCTCAGCTGCTGTGGGTGGG...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGAGCCCTGGGCAGTGTTaGCAGCAAGTGCCACACTGT | + |
Preference number: 2 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTSPGQC*QQVPHC Trigger: ACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCT...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CAA 90 bp | GCTAAGAGCTGTACACTGCCCTGCTCCCTAAAACACCACATCTTCTaGATGCCAGGGTTATGTCTCAGCAGCCCTGGGCAGTGTTGGCAG | + |
Preference number: 2 (lower is better) Translates to: AKSCTLPCSLKHHIF*MPGLCLSSPGQCWQ Trigger: CTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCTGGCATCAAGAAGATGTGGTGTTTTAGGGAGCAGGGCAGTGTACAGCTCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR GCA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTTCCAGAGAAAACTCATaGCCAGTTTCAGAGCTCTCC | + |
Preference number: 2 (lower is better) Translates to: HPVTCRHTLEAVGAAGATSRENS*PVSELS Trigger: GGAGAGCTCTGAAACTGGGCATGAGTTTTCTCTGGA...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | TGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTCAGACACACACACACGGCATaGGCAGGGTGCCTATCACAG | + |
Preference number: 2 (lower is better) Translates to: CREQHPGSIQRKLMPSFRHTHTA*AGCLSQ Trigger: CTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGTG...TCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | GCCTGGCAATGTATCAGAGCTCCAGGATTCAGTCACCAGCAAAGGCTCTCGGGAACATGCTCTGACCTGTaGTTACCTCCAGTCCCTGTC | + |
Preference number: 2 (lower is better) Translates to: AWQCIRAPGFSHQQRLSGTCSDL*LPPVPV Trigger: GACAGGGACTGGAGGTAACCACAGGTCAGAGCATGT...TCCCGAGAGCCTTTGCTGGTGACTGAATCCTGGAGCTCTGATACATTGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR GCA 90 bp | GGCAGCAGGAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGGCCCAAACTGGCTCTTaGTGGAACAGAATCAAAGTA | + |
Preference number: 2 (lower is better) Translates to: GSRKLQSSEHNSPSCHLQAQTGS*WNRIKV Trigger: TACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGC...CTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTCCTGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR GCA 90 bp | TGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTCAGATGGAATGCATGTGCGTaGGTGCACGCACGTGTACAC | + |
Preference number: 2 (lower is better) Translates to: CREQHPGSIQRKLMPSFRWNACA*VHARVH Trigger: GTGTACACGTGCGTGCACGCACGCACATGCATTCCA...TCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR TCA 90 bp | TGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTCAGAAGCCCAAAGCATTGCTaGGTGACCCTGTATCCAGTC | + |
Preference number: 2 (lower is better) Translates to: CREQHPGSIQRKLMPSFRSPKHC*VTLYPV Trigger: GACTGGATACAGGGTCACTCAGCAATGCTTTGGGCT...TCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGAGAACTGACCCTGTTTaGACCCTTGATTTCCCGAGG | + |
Preference number: 2 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTRTDPV*TLDFPR Trigger: CCTCGGGAAATCAAGGGTCCAAACAGGGTCAGTTCT...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR TCA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCAGTGCATTAGGGAAGTaGGCTAGTGGTGGTGATGGA | + |
Preference number: 2 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVSALGK*ASGGDG Trigger: TCCATCACCACCACTAGCTCACTTCCCTAATGCACT...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR-3UTR TCA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCAGTGTGTCAGTTGCTTaGTCTAAACAGCAGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: QRLLHTGRLHTAILEIMASVSVA*SKQQRK Trigger: CTTCCTCTGCTGTTTAGATCAAGCAACTGACACACT...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR TCA 90 bp | TGCCTATCACAGAGGGCAACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACATCAGGCTGGAGTGCTaGGGAAGTGAAATGAGTCTC | + |
Preference number: 2 (lower is better) Translates to: CLSQRATCGGSFKEYSPNIRLEC*GSEMSL Trigger: GAGACTCATTTCACTTCCTCAGCACTCCAGCCTGAT...GTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGTTGCCCTCTGTGATAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CAA 90 bp | CATCTTCTTGATGCCAGGGTTATGTCTCAGCAGCCCTGGGCAGTGTaGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATT | + |
Preference number: 2 (lower is better) Translates to: HLLDARVMSQQPWAV*AASATLSSANTKSI Trigger: AATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCTGGCATCAAGAAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR TCA 90 bp | GCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAACAAAGCAACTCAGATGGGACGACCAAATCATTCTGTaGAAACACACAAGGCCACAT | + |
Preference number: 2 (lower is better) Translates to: AQFQSSPQIQETKQLRWDDQIIL*KHTRPH Trigger: ATGTGGCCTTGTGTGTTTTCACAGAATGATTTGGTC...GTCCCATCTGAGTTGCTTTGTTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR GCA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGCACATGGTTCTGTCTTaGTTTGTCTTTTCATTCAAG | + |
Preference number: 2 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTHMVLS*FVFSFK Trigger: CTTGAATGAAAAGACAAAGCAAGACAGAACCATGTG...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR CCA 90 bp | AGCATCCAGAGAAAACTCATGCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAAGAGTATAGCCCAAACTaGCTCTTGCTGGAACAGAAT | + |
Preference number: 2 (lower is better) Translates to: SIQRKLMPSFRALPKSKKEYSPN*LLLEQN Trigger: ATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTC...TTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGCATGAGTTTTCTCTGGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTAGACCCAAGGGGACCTaGGAAGGGCTGGAATGCATG | + |
Preference number: 2 (lower is better) Translates to: QGHIICLSPTSIIKQAYCRPKGT*EGLECM Trigger: CATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCT...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR CCA 90 bp | TTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACTGAATTCAAGCCTAACTTCTGCTaGCTCTTCCACCTCCACCCA | + |
Preference number: 2 (lower is better) Translates to: LAASATLSSANTKSITEFKPNFC*LFHLHP Trigger: TGGGTGGAGGTGGAAGAGCCAGCAGAAGTTAGGCTT...GAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CAA 90 bp | GCAACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACTGGCTCTaGCTGGAACAGAATCAAAGTACTTTCAATATGTGTACCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: ATCGGSFKEYSPNWL*LEQNQSTFNMCTPK Trigger: CTTTGGGGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR-3UTR GCA 90 bp | TTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACTGAATTCCTCCATCTGTCCTTCTaGACACCAGAAAGAACCGTC | + |
Preference number: 2 (lower is better) Translates to: LAASATLSSANTKSITEFLHLSF*TPERTV Trigger: GACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG...GAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR TCA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTAGTGCATTAGGGAAGTaGGCTAGTGGTGGTGATGGA | + |
Preference number: 2 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLSALGK*ASGGDG Trigger: TCCATCACCACCACTAGCTCACTTCCCTAATGCACT...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CCA 72 bp | GGAGCTGCTGGAGCAACTTCTCTGTGGGGTGGGCTCTaGAGGCAGGCGACAGTGGTACCAGGCTGCCTACTG | + |
Preference number: 3 (lower is better) Translates to: GAAGATSLWGGL*RQATVVPGCLL Trigger: CAGTAGGCAGCCTGGTACCACTGTCGCCTGCCTCCAGAGCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CCA 72 bp | CTGGAGGCTGTGGGAGCTGCTGGAGCAACTTCTCTGTaGGGTGGGCTCTGGAGGCAGGCGACAGTGGTACCA | + |
Preference number: 3 (lower is better) Translates to: LEAVGAAGATSL*GGLWRQATVVP Trigger: TGGTACCACTGTCGCCTGCCTCCAGAGCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR GCA 72 bp | GGTGGGCTCTGGAGGCAGGCGACAGTGGTACCAGGCTaGCTACTGAGTGTCTATGGGGGCGCTGATTACAGC | + |
Preference number: 3 (lower is better) Translates to: GGLWRQATVVPG*LLSVYGGADYS Trigger: GCTGTAATCAGCGCCCCCATAGACACTCAGTAGGCAGCCTGGTACCACTGTCGCCTGCCTCCAGAGCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | CTACCCACGTCAGACCCAAGGGGACCTGGGAAGGGCTaGAATGCATGTGCGTGCGTGCACGCACGTGTACAC | + |
Preference number: 3 (lower is better) Translates to: LPTSDPRGPGKG*NACACVHARVH Trigger: GTGTACACGTGCGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACGTGGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR GCA 72 bp | TGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTaGTGGAGCAACTTCTCTGTGGGGTGGGCTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: CHLQTHAGGCGS*WSNFSVGWALE Trigger: CTCCAGAGCCCACCCCACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | GTAAAAGGTGCTACCCACGTCAGACCCAAGGGGACCTaGGAAGGGCTGGAATGCATGTGCGTGCGTGCACGC | + |
Preference number: 3 (lower is better) Translates to: VKGATHVRPKGT*EGLECMCVRAR Trigger: GCGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACGTGGGTAGCACCTTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR TCA 72 bp | GGCATGGAGTGGCAGGGACAGGCTTCCCACATGCTCTaGCCTGTGGTTACCTCCAGTCCCTGTCTAGTCACC | + |
Preference number: 3 (lower is better) Translates to: GMEWQGQASHML*PVVTSSPCLVT Trigger: GGTGACTAGACAGGGACTGGAGGTAACCACAGGTCAGAGCATGTGGGAAGCCTGTCCCTGCCACTCCATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | CACACACACACACACACACACACGGCATGGGCAGGGTaGCTATCACAGAGGGCAACCTGTGGAGGCAGTTTC | + |
Preference number: 3 (lower is better) Translates to: HTHTHTHTAWAG*LSQRATCGGSF Trigger: GAAACTGCCTCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | GCACAACAGCCCATCCTGTCACTTGCAGACACACGCTaGAGGCTGTGGGAGCTGCTGGAGCAACTTCTCTGT | + |
Preference number: 3 (lower is better) Translates to: AQQPILSLADTR*RLWELLEQLLC Trigger: ACAGAGAAGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | ACACACACACACACACACACACACACACACACGGCATaGGCAGGGTGCCTATCACAGAGGGCAACCTGTGGA | + |
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTA*AGCLSQRATCG Trigger: TCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | CAGCAGAGGAAGGGTAGCAAGGGGACTAAGCCTGCCTaGCAATGTATCAGAGCTCCAGGATTCAGTCACCAG | + |
Preference number: 3 (lower is better) Translates to: QQRKGSKGTKPA*QCIRAPGFSHQ Trigger: CTGGTGACTGAATCCTGGAGCTCTGATACATTGCCAGGCAGGCTTAGTCCCCTTGCTACCCTTCCTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR-3UTR CAA 90 bp | GCCTGGCAATGTATCAGAGCTCCAGGATTCAGTCACCAGCAAAGGCTCTCGGGACTGTCTAGTCACCTGTaGCTCTTAGCAACTGCGGTG | + |
Preference number: 3 (lower is better) Translates to: AWQCIRAPGFSHQQRLSGLSSHL*LLATAV Trigger: CACCGCAGTTGCTAAGAGCAACAGGTGACTAGACAG...TCCCGAGAGCCTTTGCTGGTGACTGAATCCTGGAGCTCTGATACATTGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | CCACCAGCCAGACTCCAGCAATGGACAGACAGACTGTaGAGCTCTCACACTGAGATAAATGCAAGTCGGCTC | + |
Preference number: 3 (lower is better) Translates to: PPARLQQWTDRL*SSHTEINASRL Trigger: GAGCCGACTTGCATTTATCTCAGTGTGAGAGCTGCACAGTCTGTCTGTCCATTGCTGGAGTCTGGCTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR CCA 72 bp | CATCTTCTTGATGCCAGGGTTATGTCTCAGCAGCCCTaGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCT | + |
Preference number: 3 (lower is better) Translates to: HLLDARVMSQQP*AVLAASATLSS Trigger: AGATGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCTGGCATCAAGAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | GGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATaGCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAAC | + |
Preference number: 3 (lower is better) Translates to: GSSTQVASRENS*PVSELSPNPRN Trigger: GTTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR CCA 72 bp | TGGACCCTTGATTTCCCGAGGGCCTCTCAGACCTGTTaGGCATGTTCAGACATGCTGGTGATTTGGTTGCTA | + |
Preference number: 3 (lower is better) Translates to: WTLDFPRASQTC*ACSDMLVIWLL Trigger: TAGCAACCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAAATCAAGGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR TCA 72 bp | TGTACCCCAAAGTCTCAAAGAATCAGGCTGGAGTGCTaGGGAAGTGAAATGAGTCTCTGCCCACCCACAGCA | + |
Preference number: 3 (lower is better) Translates to: CTPKSQRIRLEC*GSEMSLCPPTA Trigger: TGCTGTGGGTGGGCAGAGACTCATTTCACTTCCTCAGCACTCCAGCCTGATTCTTTGAGACTTTGGGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR TCA 72 bp | CCAGCAATGGACAGACAGACTGTGCAGCTCTCACACTaGGATAAATGCAAGTCGGCTCCAGTAGGTTGGTTG | + |
Preference number: 3 (lower is better) Translates to: PAMDRQTVQLSH*DKCKSAPVGWL Trigger: CAACCAACCTACTGGAGCCGACTTGCATTTATCTCAGTGTGAGAGCTGCACAGTCTGTCTGTCCATTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | GCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTaGACACCAGAAAGAACCGTCTGCATAGACAGGATT | + |
Preference number: 3 (lower is better) Translates to: ASRLLPRLHLSF*TPERTVCIDRI Trigger: AATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR GCA 72 bp | CCAGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTaGAGAAGGGACAGCAGACGAGGCTATAGACTTAAC | + |
Preference number: 3 (lower is better) Translates to: PVSSQYLHLHAM*RRDSRRGYRLN Trigger: GTTAAGTCTATAGCCTCGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR-3UTR CAA 90 bp | ACAAATATGTGCAAGGCAACCAACCGTCTCCACGGGGAAGACCAAATCATTCTGACAGCAGCTGAGGTCTaGAAGCACAGCCTGGAATTC | + |
Preference number: 3 (lower is better) Translates to: TNMCKATNRLHGEDQIILTAAEV*KHSLEF Trigger: GAATTCCAGGCTGTGCTTCAAGACCTCAGCTGCTGT...CAGAATGATTTGGTCTTCCCCGTGGAGACGGTTGGTTGCCTTGCACATATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR-3UTR CAA 90 bp | CCCGTCTGCTTTCCTGACACCGAGCCTTCTGGGCTCATTCACTCAGTAGCCTTCGAACTGTTAAGACGATaGAAGTCAACATTGCTCTTC | + |
Preference number: 3 (lower is better) Translates to: PVCFPDTEPSGLIHSVAFELLRR*KSTLLF Trigger: GAAGAGCAATGTTGACTTCAATCGTCTTAACAGTTC...GAAGGCTACTGAGTGAATGAGCCCAGAAGGCTCGGTGTCAGGAAAGCAGACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR-3UTR CAA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGAAACACCACATCTTCTaGATGCCAGGGTTATGTCTC | + |
Preference number: 3 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTKHHIF*MPGLCL Trigger: GAGACATAACCCTGGCATCAAGAAGATGTGGTGTTT...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTaGCCAGGCTCCATCTGTCCTTCTGCACACCAGAAA | + |
Preference number: 3 (lower is better) Translates to: SRLKVKVRLPDY*PGSICPSAHQK Trigger: TTTCTGGTGTGCAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
||
3UTR-3UTR CAA 90 bp | TTCCCGAGGGCCTCTCAGACCTGTTGGGCATGTTCAGACATGCTGGTGATTTGGAGAAAAGTGTGTCAGTaGCTTGATCTAAACAGCAGA | + |
Preference number: 3 (lower is better) Translates to: FPRASQTCWACSDMLVIWRKVCQ*LDLNSR Trigger: TCTGCTGTTTAGATCAAGCAACTGACACACTTTTCT...CCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR TCA 72 bp | ACAGCTAGGCAAGTTCAACCCCTAAACTTTGGCCTGTaGTGCAGGAGAGACATGTGGAAAGGAGTCTTCTCA | + |
Preference number: 3 (lower is better) Translates to: TARQVQPLNFGL*CRRDMWKGVFS Trigger: TGAGAAGACTCCTTTCCACATGTCTCTCCTGCATCACAGGCCAAAGTTTAGGGGTTGAACTTGCCTAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
3UTR GCA 72 bp | TATGTCTCAGCAGCCCTGGGCAGTGTTGGCAGCAAGTaGCACACTGTCATCTGCCAATACAAAAAGTATTAC | + |
Preference number: 3 (lower is better) Translates to: YVSAALGSVGSK*HTVICQYKKYY Trigger: GTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR TCA 72 bp | ACCAACCGTCTCCACGGGGAAGACCAAATCATTCTGTaGAAACACACAAGGCCACATAATATGCTTATCTCC | + |
Preference number: 3 (lower is better) Translates to: TNRLHGEDQIIL*KHTRPHNMLIS Trigger: GGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAATGATTTGGTCTTCCCCGTGGAGACGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR GCA 72 bp | TGCAGAAGGGACAGCAGACGAGGCTATAGACTTAACTaGTCCACATGGTTCTGTCTTGCTTTGTCTTTTCAT | + |
Preference number: 3 (lower is better) Translates to: CRRDSRRGYRLN*STWFCLALSFH Trigger: ATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTCGTCTGCTGTCCCTTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR-3UTR CAA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTCAGGCTTCCAGACTATaGCCCAGGCTCCATCTGTCC | + |
Preference number: 3 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLQASRL*PRLHLS Trigger: GGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTG...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR TCA 72 bp | CCTCTCAGACCTGTTGGGCATGTTCAGACATGCTGGTaGTTTGGTTGCTACCTGTTTTCTAAGTTCATGTTA | + |
Preference number: 3 (lower is better) Translates to: PLRPVGHVQTCW*FGCYLFSKFML Trigger: TAACATGAACTTAGAAAACAGGTAGCAACCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CCA 72 bp | GACAGCAGACGAGGCTATAGACTTAACTGCTCCACATaGTTCTGTCTTGCTTTGTCTTTTCATTCAAGTGAG | + |
Preference number: 3 (lower is better) Translates to: DSRRGYRLNCST*FCLALSFHSSE Trigger: CTCACTTGAATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTCGTCTGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR CCA 72 bp | ACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACTaGCTCTTGCTGGAACAGAATCAAAGTACTTTCAAT | + |
Preference number: 3 (lower is better) Translates to: TCGGSFKEYSPN*LLLEQNQSTFN Trigger: ATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CCA 72 bp | GCAGTTTCAAAGAGTATAGCCCAAACTGGCTCTTGCTaGAACAGAATCAAAGTACTTTCAATATGTGTACCC | + |
Preference number: 3 (lower is better) Translates to: AVSKSIAQTGSC*NRIKVLSICVP Trigger: GGGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR TCA 72 bp | TGCCACACTGTCATCTGCCAATACAAAAAGTATTACTaGATTCAGCAAACTTATGGAGGTGCCAGAGAAAAC | + |
Preference number: 3 (lower is better) Translates to: CHTVICQYKKYY*IQQTYGGAREN Trigger: GTTTTCTCTGGCACCTCCATAAGTTTGCTGAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR GCA 72 bp | GAGGCAGTTTCAAAGAGTATAGCCCAAACTGGCTCTTaGTGGAACAGAATCAAAGTACTTTCAATATGTGTA | + |
Preference number: 3 (lower is better) Translates to: EAVSKSIAQTGS*WNRIKVLSICV Trigger: TACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCTATACTCTTTGAAACTGCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR TCA 72 bp | TTGTTAGCAAAGGAAAACGCACACAGCTTCATCATCTaGATAAGTGAAGTATACTCCTCCAAGGTCTATATG | + |
Preference number: 3 (lower is better) Translates to: LLAKENAHSFII*ISEVYSSKVYM Trigger: CATATAGACCTTGGAGGAGTATACTTCACTTATTCAGATGATGAAGCTGTGTGCGTTTTCCTTTGCTAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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3UTR TCA 72 bp | GGCTCAGGAATCACTGTTATTCTAATAAAAATATCCTaGCGTAGCTTTCAAGTTCCCACTGAACTGTTAAGA | + |
Preference number: 3 (lower is better) Translates to: GSGITVILIKIS*RSFQVPTELLR Trigger: TCTTAACAGTTCAGTGGGAACTTGAAAGCTACGTCAGGATATTTTTATTAGAATAACAGTGATTCCTGAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR GCA 72 bp | AAATCATTCTGTGAAAACACACAAGGCCACATAATATaGTTATCTCCAACCTCAATCATAAAACAAGCCTAT | + |
Preference number: 3 (lower is better) Translates to: KSFCENTQGHII*LSPTSIIKQAY Trigger: ATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAATGATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | ACACACACGGCATGGGCAGGGTGCCTATCACAGAGGGCAACCTGTGGAGGCAGTAAGGGCCGCCGGCCCTaGAGGCTGCCGTGCGTCAGC | + |
Preference number: 4 (lower is better) Translates to: THTAWAGCLSQRATCGGSKGRRP*RLPCVS Trigger: GCTGACGCACGGCAGCCTCCAGGGCCGGCGGCCCTT...ACTGCCTCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | CCCGTCTGCTTTCCTGACACCGAGCCTTCTGGGCTCATTCACTCAGTAGCCTTCGGCTCGGCCTCCTCCTaGCCATGGGTGTCGGCCGCG | + |
Preference number: 4 (lower is better) Translates to: PVCFPDTEPSGLIHSVAFGSASS*PWVSAA Trigger: CGCGGCCGACACCCATGGTCAGGAGGAGGCCGAGCC...GAAGGCTACTGAGTGAATGAGCCCAGAAGGCTCGGTGTCAGGAAAGCAGACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | GCCTGGCAATGTATCAGAGCTCCAGGATTCAGTCACCAGCAAAGGCTCTCGGGAAAGGGCCGCCGGCCCTaGAGGCTGCCGTGCGTCAGC | + |
Preference number: 4 (lower is better) Translates to: AWQCIRAPGFSHQQRLSGKGRRP*RLPCVS Trigger: GCTGACGCACGGCAGCCTCCAGGGCCGGCGGCCCTT...TCCCGAGAGCCTTTGCTGGTGACTGAATCCTGGAGCTCTGATACATTGCCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR GCA 90 bp | ACACACACACGGCATGGGCAGGGTGCCTATCACAGAGGGCAACCTGTGGAGGCAACACTGCAGCCCAGCTaGAGGGGCTGGCACTGTCAG | + |
Preference number: 4 (lower is better) Translates to: THTRHGQGAYHRGQPVEATLQPS*RGWHCQ Trigger: CTGACAGTGCCAGCCCCTGCAGCTGGGCTGCAGTGT...TGCCTCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR GCA 90 bp | TTCCCGAGGGCCTCTCAGACCTGTTGGGCATGTTCAGACATGCTGGTGATTTGGTGGCGCCGGCTGTGCTaGCGCACCACGTGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: FPRASQTCWACSDMLVIWWRRLC*RTTCAF Trigger: GAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCA...CCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
3UTR CAA 72 bp | CTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTaGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: LQSSEHNSPSCH*QTHAGGCGSCW Trigger: CCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CGTCAGACCCAAGGGGACCTGGGAAGGGCTGGAATGCATGTGCGTGCGTGCACGGAGCTCACTTTGGCCTaGGCTACTCAGTTCACTGCT | + |
Preference number: 4 (lower is better) Translates to: RQTQGDLGRAGMHVRACTELTLA*ATQFTA Trigger: AGCAGTGAACTGAGTAGCCCAGGCCAAAGTGAGCTC...CGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | ACAAATATGTGCAAGGCAACCAACCGTCTCCACGGGGAAGACCAAATCATTCTGGGCTCGGCCTCCTCCTaGCCATGGGTGTCGGCCGCG | + |
Preference number: 4 (lower is better) Translates to: TNMCKATNRLHGEDQIILGSASS*PWVSAA Trigger: CGCGGCCGACACCCATGGTCAGGAGGAGGCCGAGCC...CAGAATGATTTGGTCTTCCCCGTGGAGACGGTTGGTTGCCTTGCACATATTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR TCA 90 bp | TTCCCGAGGGCCTCTCAGACCTGTTGGGCATGTTCAGACATGCTGGTGATTTGGTGCGCTGGTGGGAGTTaGGCTTGGCGTGTGTGGGGA | + |
Preference number: 4 (lower is better) Translates to: FPRASQTCWACSDMLVIWCAGGS*AWRVWG Trigger: TCCCCACACACGCCAAGCTCAACTCCCACCAGCGCA...CCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
CDS-3UTR TCA 90 bp | AGCATCCAGAGAAAACTCATGCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAAGCGCCGCAGCCAGCGTaGAGACGCCGCGGTCGAAGC | + |
Preference number: 4 (lower is better) Translates to: SIQRKLMPSFRALPKSKKAPQPA*RRRGRS Trigger: GCTTCGACCGCGGCGTCTTCACGCTGGCTGCGGCGC...TTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGCATGAGTTTTCTCTGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR TCA 90 bp | GGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTAGCGCCGCAGCCAGCGTaGAGACGCCGCGGTCGAAGC | + |
Preference number: 4 (lower is better) Translates to: GQCWQQVPHCHLPIQKVLAPQPA*RRRGRS Trigger: GCTTCGACCGCGGCGTCTTCACGCTGGCTGCGGCGC...TAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
CDS-3UTR TCA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTTGCTATGCTTGGAGGTaGAGAGTCGGTTGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: HPVTCRHTLEAVGAAGATCYAWR*RVGCSW Trigger: CCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCA...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR TCA 90 bp | TACACACACACACACACACACACACACACACACACACGGCATGGGCAGGGTGCCGTTCACTGCTGGGTGTaGGAGAGCTCGGAGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: YTHTHTHTHTHTRHGQGAVHCWV*ESSELP Trigger: TGGAAGCTCCGAGCTCTCTCACACCCAGCAGTGAAC...GGCACCCTGCCCATGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | GCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAACAAAGCAACTCAGATGGGACTGGCGCCGGCTGTGCTaGCGCACCACGTGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: AQFQSSPQIQETKQLRWDWRRLC*RTTCAF Trigger: GAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCA...GTCCCATCTGAGTTGCTTTGTTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CGTCAGACCCAAGGGGACCTGGGAAGGGCTGGAATGCATGTGCGTGCGTGCACGAAGTGGGCTCGATTATaGGAAAACAGGGCACTCACT | + |
Preference number: 4 (lower is better) Translates to: RQTQGDLGRAGMHVRACTKWARL*ENRALT Trigger: AGTGAGTGCCCTGTTTTCCCATAATCGAGCCCACTT...CGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCTGCACTGAAGCTGCCTaGTTGGAGAACCGTGGCCGA | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRCTEAA*LENRGR Trigger: TCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCA...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GGCAGCAGGAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGCCCCTGGACCACATCTaGGACAGGAGACAAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: GSRKLQSSEHNSPSCHLQPLDHI*DRRQVL Trigger: CAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGG...CTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTCCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCGTCCTTCTGAGCCCCTaGCCTCTCTGTAGAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRVLLSP*PLCRAG Trigger: TCCAGCTCTACAGAGAGGCCAGGGGCTCAGAAGGAC...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCAGAGCTCTTGCTCCCTaGAGTGGGCTCGATTATGGG | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRRALAP*SGLDYG Trigger: CCCATAATCGAGCCCACTTCAGGGAGCAAGAGCTCT...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | AGAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAAGCTCTGAGTCCTTCTaGGCCCCTGGCCTCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: RGSISRLLAGGRPANHLSSSESF*APGLSV Trigger: TACAGAGAGGCCAGGGGCTCAGAAGGACTCAGAGCT...TGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | GGCAGCAGGAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGGCAGATCTGGCACACTaGCAGTTTCTTGGGTGGTGT | + |
Preference number: 4 (lower is better) Translates to: GSRKLQSSEHNSPSCHLQADLAH*QFLGWC Trigger: ACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGC...CTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTCCTGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTGGGATCTGGACACACTaGAGCCCAGCTGCAGGGGCT | + |
Preference number: 4 (lower is better) Translates to: PFVGSSTQVASRENSCPVGIWTH*SPAAGA Trigger: AGCCCCTGCAGCTGGGCTGCAGTGTGTCCAGATCCC...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCAGCAAAACCTCCAGGTaGTGGAAGCACCTCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRSKTSR*WKHLLE Trigger: CTCCAGGAGGTGCTTCCAGCACCTGGAGGTTTTGCT...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CGTCAGACCCAAGGGGACCTGGGAAGGGCTGGAATGCATGTGCGTGCGTGCACGACACTGCCAGTTTCTTaGGTGGTGTCTGAAGAAGTT | + |
Preference number: 4 (lower is better) Translates to: RQTQGDLGRAGMHVRACTTLPVS*VVSEEV Trigger: AACTTCTTCAGACACCACCCAAGAAACTGGCAGTGT...CGTGCACGCACGCACATGCATTCCAGCCCTTCCCAGGTCCCCTTGGGTCTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGACGATTGGGATGGCCCATaGCTTTCTTTCTGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: GSISRLLAGGRPANHLSDDWDGP*LSFCPW Trigger: CCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATC...GTCTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTCTGGACAGCACAGATTaGGATGGCCCATGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: HPVTCRHTLEAVGAAGATLDSTD*DGPWLS Trigger: AGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAG...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | GCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAACAAAGCAACTCAGATGGGACTGCGCTGGTGGGAGTTaGGCTTGGCGTGTGTGGGGA | + |
Preference number: 4 (lower is better) Translates to: AQFQSSPQIQETKQLRWDCAGGS*AWRVWG Trigger: TCCCCACACACGCCAAGCTCAACTCCCACCAGCGCA...GTCCCATCTGAGTTGCTTTGTTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGGTTCACTGCTGGGTGTaGGAGAGCTCGGAGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTVHCWV*ESSELP Trigger: TGGAAGCTCCGAGCTCTCTCACACCCAGCAGTGAAC...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | AGTTTCCTCTCAGTACCTGCACCTTCATGCCATGTGCAGAAGGGACAGCAGACGAGCTCTGAGTCCTTCTaGGCCCCTGGCCTCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: SFLSVPAPSCHVQKGQQTSSESF*APGLSV Trigger: TACAGAGAGGCCAGGGGCTCAGAAGGACTCAGAGCT...CGTCTGCTGTCCCTTCTGCACATGGCATGAAGGTGCAGGTACTGAGAGGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTGCCAGCACTGAGCTCTaGGTCCTTCTGAGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLASTEL*VLLSPW Trigger: CCAGGGGCTCAGAAGGACTCAGAGCTCAGTGCTGGC...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR GCA 90 bp | GGAAGTGAAATGAGTCTCTGCCCACCCACAGCAGCTGAGGTCTTGAAGCACAGCCCTGAGGGGTCATCCTaGAGAACAGGGATCTGGACA | + |
Preference number: 4 (lower is better) Translates to: GSEMSLCPPTAAEVLKHSPEGSS*RTGIWT Trigger: TGTCCAGATCCCTGTTCTGCAGGATGACCCCTCAGG...GCTGTGCTTCAAGACCTCAGCTGCTGTGGGTGGGCAGAGACTCATTTCACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGAGGTGGGTGATACTGTaGCCCTTCAGATGCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: EVLLAGYWQAAGQPITFQRWVIL*PFRCSA Trigger: AGCAGAGCATCTGAAGGGCCACAGTATCACCCACCT...CTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | AGGGTTATGTCTCAGCAGCCCTGGGCAGTGTTGGCAGCAAGTGCCACACTGTCAAGGACTGTCCAAACTTaGAGGCATATCACCGTGGGC | + |
Preference number: 4 (lower is better) Translates to: RVMSQQPWAVLAASATLSRTVQT*RHITVG Trigger: GCCCACGGTGATATGCCTCCAAGTTTGGACAGTCCT...TGACAGTGTGGCACTTGCTGCCAACACTGCCCAGGGCTGCTGAGACATAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | GGCAAGCCTAACTTCTGCTGGCTCTTCCACCTCCACCCAGGTTCTGCTAGCTCTCTGGACAGCACAGATTaGGATGGCCCATGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: GKPNFCWLFHLHPGSASSLDSTD*DGPWLS Trigger: AGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAG...AGAGCTAGCAGAACCTGGGTGGAGGTGGAAGAGCCAGCAGAAGTTAGGCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | CAAAGTACTTTCAATATGTGTACCCCAAAGTCTCAAAGAATCAGGCTGGAGTGCCATCCAGCGGGCACTTaGAGGGCCGCCGGCCCTGGA | + |
Preference number: 4 (lower is better) Translates to: QSTFNMCTPKSQRIRLECHPAGT*RAAGPG Trigger: TCCAGGGCCGGCGGCCCTTCAAGTGCCCGCTGGATG...GCACTCCAGCCTGATTCTTTGAGACTTTGGGGTACACATATTGAAAGTACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | GGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGACGTGAATCATCTGCACTaGAGCTGCCTGGTTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: GSISRLLAGGRPANHLSDVNHLH*SCLVGE Trigger: TTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCAC...GTCTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCAGCTCTGAGTCCTTCTaGGCCCCTGGCCTCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVSSESF*APGLSV Trigger: TACAGAGAGGCCAGGGGCTCAGAAGGACTCAGAGCT...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCCCTTTTACTTTCCTGTaGGCAGAGTCAGAGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRPFTFL*AESEAP Trigger: AGGAGCCTCTGACTCTGCTCACAGGAAAGTAAAAGG...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | GAAGCTCCAGAGCTCAGAGCACAACAGCCCATCCTGTCACTTGCAGACACACGCACTTCCTGGTACCTGTaGAGTCTCCAGTCCAGCAAA | + |
Preference number: 4 (lower is better) Translates to: EAPELRAQQPILSLADTRTSWYL*SLQSSK Trigger: TTTGCTGGACTGGAGACTGCACAGGTACCAGGAAGT...GCGTGTGTCTGCAAGTGACAGGATGGGCTGTTGTGCTCTGAGCTCTGGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTGCGAGCTGAGAACCTaGCACAGCACCCTTCCACAG | + |
Preference number: 4 (lower is better) Translates to: PFVGSSTQVASRENSCPVCELRT*HSTLPQ Trigger: CTGTGGAAGGGTGCTGTGCCAGGTTCTCAGCTCGCA...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTCTGTCAAGTTATTGCTaGGGGTCAAAGCTGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: HPVTCRHTLEAVGAAGATLSSYC*GSKLES Trigger: ACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAG...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | GCCTGGCAATGTATCAGAGCTCCAGGATTCAGTCACCAGCAAAGGCTCTCGGGACTTTCTTTCTGCCCCTaGACCACATCTGGGACAGGA | + |
Preference number: 4 (lower is better) Translates to: AWQCIRAPGFSHQQRLSGLSFCP*TTSGTG Trigger: TCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAG...TCCCGAGAGCCTTTGCTGGTGACTGAATCCTGGAGCTCTGATACATTGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | CCCGTCTGCTTTCCTGACACCGAGCCTTCTGGGCTCATTCACTCAGTAGCCTTCCTCTGCTCTAGTGAATaGCTTGCCACAACCTTCAAC | + |
Preference number: 4 (lower is better) Translates to: PVCFPDTEPSGLIHSVAFLCSSE*LATTFN Trigger: GTTGAAGGTTGTGGCAAGTCATTCACTAGAGCAGAG...GAAGGCTACTGAGTGAATGAGCCCAGAAGGCTCGGTGTCAGGAAAGCAGACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | AGAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCACTCCACTGGGTACCATaGGAGTTCCACAGAAACAAC | + |
Preference number: 4 (lower is better) Translates to: RGSISRLLAGGRPANHLSLHWVP*EFHRNN Trigger: GTTGTTTCTGTGGAACTCTCATGGTACCCAGTGGAG...TGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATCACCAGGCAGCCTACTaGTCCTGTGCTCATGGCCTG | + |
Preference number: 4 (lower is better) Translates to: LHLSFCTPERTVCIDRIHHQAAY*SCAHGL Trigger: CAGGCCATGAGCACAGGAGCAGTAGGCTGCCTGGTG...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | TCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGTGCGAGCTGAGAACCTaGCACAGCACCCTTCCACAG | + |
Preference number: 4 (lower is better) Translates to: SKSKSGFQTIAQAPSVLLCELRT*HSTLPQ Trigger: CTGTGGAAGGGTGCTGTGCCAGGTTCTCAGCTCGCA...CAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | GGAAGTGAAATGAGTCTCTGCCCACCCACAGCAGCTGAGGTCTTGAAGCACAGCCAGCACAGATTGGGATaGCCCATGGCTTTCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: GSEMSLCPPTAAEVLKHSQHRLG*PMAFFL Trigger: CAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTG...GCTGTGCTTCAAGACCTCAGCTGCTGTGGGTGGGCAGAGACTCATTTCACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCCAGCACAGATTGGGATaGCCCATGGCTTTCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: QRLLHTGRLHTAILEIMAQHRLG*PMAFFL Trigger: CAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTG...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTGTCCTTCTGAGCCCCTaGCCTCTCTGTAGAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: SRLKVKVRLPDYCPGSICVLLSP*PLCRAG Trigger: TCCAGCTCTACAGAGAGGCCAGGGGCTCAGAAGGAC...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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3UTR CAA 72 bp | GAAATGAGTCTCTGCCCACCCACAGCAGCTGAGGTCTaGAAGCACAGCCTGGAATTCAGTCTTCATTGGCTC | + |
Preference number: 4 (lower is better) Translates to: EMSLCPPTAAEV*KHSLEFSLHWL Trigger: GAGCCAATGAAGACTGAATTCCAGGCTGTGCTTCAAGACCTCAGCTGCTGTGGGTGGGCAGAGACTCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | TACACACACACACACACACACACACACACACACACACGGCATGGGCAGGGTGCCCCAGCCACAACTGTCTaGGTCACAAATAAATGGTCT | + |
Preference number: 4 (lower is better) Translates to: YTHTHTHTHTHTRHGQGAPATTV*VTNKWS Trigger: AGACCATTTATTTGTGACTCAGACAGTTGTGGCTGG...GGCACCCTGCCCATGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | ACACACACACGGCATGGGCAGGGTGCCTATCACAGAGGGCAACCTGTGGAGGCAAGATGTTTCTTAGAATaGATGTACAGACTGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: THTRHGQGAYHRGQPVEARCFLE*MYRLLR Trigger: TCGCAGCAGTCTGTACATTCATTCTAAGAAACATCT...TGCCTCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTTGCTATGCTTGGAGGTaGAGAGTCGGTTGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: SRLKVKVRLPDYCPGSICCYAWR*RVGCSW Trigger: CCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCA...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | ACTAGATGTTTTGCCAGAGCTCAACCTGACTTTGGCTTCACTACAGCATACAGTGCCAGCACTGAGCTCTaGGTCCTTCTGAGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: TRCFARAQPDFGFTTAYSASTEL*VLLSPW Trigger: CCAGGGGCTCAGAAGGACTCAGAGCTCAGTGCTGGC...ACTGTATGCTGTAGTGAAGCCAAAGTCAGGTTGAGCTCTGGCAAAACATCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | GGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACACCAGGCAGCCTACTaGTCCTGTGCTCATGGCCTG | + |
Preference number: 4 (lower is better) Translates to: GQCWQQVPHCHLPIQKVLHQAAY*SCAHGL Trigger: CAGGCCATGAGCACAGGAGCAGTAGGCTGCCTGGTG...TAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCAAGTGGGCTCGATTATaGGAAAACAGGGCACTCACT | + |
Preference number: 4 (lower is better) Translates to: QRLLHTGRLHTAILEIMAKWARL*ENRALT Trigger: AGTGAGTGCCCTGTTTTCCCATAATCGAGCCCACTT...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATTGCACTGAAGCTGCCTaGTTGGAGAACCGTGGCCGA | + |
Preference number: 4 (lower is better) Translates to: LHLSFCTPERTVCIDRIHCTEAA*LENRGR Trigger: TCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCA...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | TCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGCCCCTGGACCACATCTaGGACAGGAGACAAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: SKSKSGFQTIAQAPSVLLPLDHI*DRRQVL Trigger: CAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGG...CAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCGTGAATCATCTGCACTaGAGCTGCCTGGTTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVVNHLH*SCLVGE Trigger: TTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCAC...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR GCA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCAGCCTACTGCTCCTGTaGTCATGGCCTGTGAATCAT | + |
Preference number: 4 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVSLLLL*SWPVNH Trigger: ATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCT...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR GCA 90 bp | ACTAGATGTTTTGCCAGAGCTCAACCTGACTTTGGCTTCACTACAGCATACAGTCACCAGGCAGCCTACTaGTCCTGTGCTCATGGCCTG | + |
Preference number: 4 (lower is better) Translates to: TRCFARAQPDFGFTTAYSHQAAY*SCAHGL Trigger: CAGGCCATGAGCACAGGAGCAGTAGGCTGCCTGGTG...ACTGTATGCTGTAGTGAAGCCAAAGTCAGGTTGAGCTCTGGCAAAACATCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATCCCCTGGACCACATCTaGGACAGGAGACAAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: LHLSFCTPERTVCIDRIHPLDHI*DRRQVL Trigger: CAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGG...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCAGCACAGATTGGGATaGCCCATGGCTTTCTTTCTG | + |
Preference number: 4 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVQHRLG*PMAFFL Trigger: CAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTG...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | ACAAATATGTGCAAGGCAACCAACCGTCTCCACGGGGAAGACCAAATCATTCTGTGCAGAACAGGGATCTaGACACACTGCAGCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: TNMCKATNRLHGEDQIILCRTGI*THCSPA Trigger: AGCTGGGCTGCAGTGTGTCCAGATCCCTGTTCTGCA...CAGAATGATTTGGTCTTCCCCGTGGAGACGGTTGGTTGCCTTGCACATATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR TCA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTGTGAATCATCTGCACTaGAGCTGCCTGGTTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLVNHLH*SCLVGE Trigger: TTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCAC...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTTGTGCTCATGGCCTGTaGATCATCTGCACTGAAGCT | + |
Preference number: 4 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLCAHGL*IICTEA Trigger: AGCTTCAGTGCAGATGATTCACAGGCCATGAGCACA...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | TCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGTGTGCTCATGGCCTGTaGATCATCTGCACTGAAGCT | + |
Preference number: 4 (lower is better) Translates to: SKSKSGFQTIAQAPSVLLCAHGL*IICTEA Trigger: AGCTTCAGTGCAGATGATTCACAGGCCATGAGCACA...CAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | CAAAGTACTTTCAATATGTGTACCCCAAAGTCTCAAAGAATCAGGCTGGAGTGCCAGGCAGATCCACGGTaGAGTAGGGGTGGAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: QSTFNMCTPKSQRIRLECQADPR*SRGGRQ Trigger: CTGCCTTCCACCCCTACTTCACCGTGGATCTGCCTG...GCACTCCAGCCTGATTCTTTGAGACTTTGGGGTACACATATTGAAAGTACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | ACTAGATGTTTTGCCAGAGCTCAACCTGACTTTGGCTTCACTACAGCATACAGTGGACGCAGCTTGTCATaGGACTGCAGGTGCCGTTTG | + |
Preference number: 4 (lower is better) Translates to: TRCFARAQPDFGFTTAYSGRSLS*DCRCRL Trigger: CAAACGGCACCTGCAGTCGCATGACAAGCTGCGTCC...ACTGTATGCTGTAGTGAAGCCAAAGTCAGGTTGAGCTCTGGCAAAACATCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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3UTR CAA 72 bp | TTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATaGCCCAGGCTCCATCTGTCCTTCTGCACACCAGAA | + |
Preference number: 4 (lower is better) Translates to: FQTQSQSQASRL*PRLHLSFCTPE Trigger: TTCTGGTGTGCAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
||
CDS-3UTR GCA 90 bp | TGCCTATCACAGAGGGCAACCTGTGGAGGCAGTTTCAAAGAGTATAGCCCAAACAATGAATGTACAGACTaGTGCGAGCTGAGAACCTGG | + |
Preference number: 4 (lower is better) Translates to: CLSQRATCGGSFKEYSPNNECTD*CELRTW Trigger: CCAGGTTCTCAGCTCGCAGCAGTCTGTACATTCATT...GTTTGGGCTATACTCTTTGAAACTGCCTCCACAGGTTGCCCTCTGTGATAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR GCA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTAATGAATGTACAGACTaGTGCGAGCTGAGAACCTGG | + |
Preference number: 4 (lower is better) Translates to: SRLKVKVRLPDYCPGSICNECTD*CELRTW Trigger: CCAGGTTCTCAGCTCGCAGCAGTCTGTACATTCATT...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR GCA 90 bp | GTCTCCACGGGGAAGACCAAATCATTCTGTGAAAACACACAAGGCCACATAATACTGCCGCACCACGTGTaGCTTCATGCTATGCTTGGA | + |
Preference number: 4 (lower is better) Translates to: VSTGKTKSFCENTQGHIILPHHV*LHAMLG Trigger: TCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAG...TATTATGTGGCCTTGTGTGTTTTCACAGAATGATTTGGTCTTCCCCGTGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR GCA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTGTCAGAGAAAAGTGCTaGGAGATCTATGTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: PFVGSSTQVASRENSCPVVREKC*EIYVGE Trigger: CTCACCAACATAGATCTCGCAGCACTTTTCTCTGAC...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCTGTCAAGTTATTGCTaGGGGTCAAAGCTGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: SRLKVKVRLPDYCPGSICLSSYC*GSKLES Trigger: ACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAG...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGTCAAGTTATTGCTaGGGGTCAAAGCTGGAGAGT | + |
Preference number: 4 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLLSSYC*GSKLES Trigger: ACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAG...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | ACAAATATGTGCAAGGCAACCAACCGTCTCCACGGGGAAGACCAAATCATTCTGCTCTGCTCTAGTGAATaGCTTGCCACAACCTTCAAC | + |
Preference number: 4 (lower is better) Translates to: TNMCKATNRLHGEDQIILLCSSE*LATTFN Trigger: GTTGAAGGTTGTGGCAAGTCATTCACTAGAGCAGAG...CAGAATGATTTGGTCTTCCCCGTGGAGACGGTTGGTTGCCTTGCACATATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR GCA 90 bp | GAGGCTATAGACTTAACTGCTCCACATGGTTCTGTCTTGCTTTGTCTTTTCATTGGACGCAGCTTGTCATaGGACTGCAGGTGCCGTTTG | + |
Preference number: 4 (lower is better) Translates to: EAIDLTAPHGSVLLCLFIGRSLS*DCRCRL Trigger: CAAACGGCACCTGCAGTCGCATGACAAGCTGCGTCC...AATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTACACTGCCAGTTTCTTaGGTGGTGTCTGAAGAAGTT | + |
Preference number: 4 (lower is better) Translates to: SRLKVKVRLPDYCPGSICTLPVS*VVSEEV Trigger: AACTTCTTCAGACACCACCCAAGAAACTGGCAGTGT...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
||
CDS-3UTR CCA 90 bp | TTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACTGAATTCGTCCTTCTGAGCCCCTaGCCTCTCTGTAGAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: LAASATLSSANTKSITEFVLLSP*PLCRAG Trigger: TCCAGCTCTACAGAGAGGCCAGGGGCTCAGAAGGAC...GAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | GAGGCTATAGACTTAACTGCTCCACATGGTTCTGTCTTGCTTTGTCTTTTCATTAGAGCTCTTGCTCCCTaGAGTGGGCTCGATTATGGG | + |
Preference number: 4 (lower is better) Translates to: EAIDLTAPHGSVLLCLFIRALAP*SGLDYG Trigger: CCCATAATCGAGCCCACTTCAGGGAGCAAGAGCTCT...AATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATCCAGCCACAACTGTCTaGGTCACAAATAAATGGTCT | + |
Preference number: 4 (lower is better) Translates to: LHLSFCTPERTVCIDRIHPATTV*VTNKWS Trigger: AGACCATTTATTTGTGACTCAGACAGTTGTGGCTGG...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGAGCCAGCACTGAGCTCTaGGTCCTTCTGAGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: SRTCHYVKSTKVNISIVRASTEL*VLLSPW Trigger: CCAGGGGCTCAGAAGGACTCAGAGCTCAGTGCTGGC...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | TGTAAGAATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCGATTGGGATGGCCCATaGCTTTCTTTCTGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: CKNVNSRLKVKVRLPDYCDWDGP*LSFCPW Trigger: CCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATC...GCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATTCTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTTGGCCTGAGTGGACATaGGGAGGGTTGATCGTGCCA | + |
Preference number: 4 (lower is better) Translates to: QGHIICLSPTSIIKQAYCWPEWT*GGLIVP Trigger: TGGCACGATCAACCCTCCTCATGTCCACTCAGGCCA...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | AGCCCAAACTGGCTCTTGCTGGAACAGAATCAAAGTACTTTCAATATGTGTACCAGCCTACTGCTCCTGTaGTCATGGCCTGTGAATCAT | + |
Preference number: 4 (lower is better) Translates to: SPNWLLLEQNQSTFNMCTSLLLL*SWPVNH Trigger: ATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCT...GGTACACATATTGAAAGTACTTTGATTCTGTTCCAGCAAGAGCCAGTTTGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | TTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTACTGAATTCGCAGATCTGGCACACTaGCAGTTTCTTGGGTGGTGT | + |
Preference number: 4 (lower is better) Translates to: LAASATLSSANTKSITEFADLAH*QFLGWC Trigger: ACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGC...GAATTCAGTAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR GCA 90 bp | TGTAAGAATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCGCAGATCTGGCACACTaGCAGTTTCTTGGGTGGTGT | + |
Preference number: 4 (lower is better) Translates to: CKNVNSRLKVKVRLPDYCADLAH*QFLGWC Trigger: ACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGC...GCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATTCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | GAGGCTATAGACTTAACTGCTCCACATGGTTCTGTCTTGCTTTGTCTTTTCATTGAGCTCACTTTGGCCTaGGCTACTCAGTTCACTGCT | + |
Preference number: 4 (lower is better) Translates to: EAIDLTAPHGSVLLCLFIELTLA*ATQFTA Trigger: AGCAGTGAACTGAGTAGCCCAGGCCAAAGTGAGCTC...AATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | GGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTATTGTTCCACCTTTATTaGAACCAGCAGATCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: GQCWQQVPHCHLPIQKVLLFHLY*NQQIWH Trigger: GTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAA...TAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | CAAAGTACTTTCAATATGTGTACCCCAAAGTCTCAAAGAATCAGGCTGGAGTGCGTAATCAGTTCTTGCTaGGCCCCCACTTTCCAAGTA | + |
Preference number: 4 (lower is better) Translates to: QSTFNMCTPKSQRIRLECVISSC*APTFQV Trigger: TACTTGGAAAGTGGGGGCTCAGCAAGAACTGATTAC...GCACTCCAGCCTGATTCTTTGAGACTTTGGGGTACACATATTGAAAGTACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | TGTAAGAATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCAGCCTACTGCTCCTGTaGTCATGGCCTGTGAATCAT | + |
Preference number: 4 (lower is better) Translates to: CKNVNSRLKVKVRLPDYCSLLLL*SWPVNH Trigger: ATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCT...GCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATTCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGATGCACTGAAGCTGCCTaGTTGGAGAACCGTGGCCGA | + |
Preference number: 4 (lower is better) Translates to: SRTCHYVKSTKVNISIVRCTEAA*LENRGR Trigger: TCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCA...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTAAAACCTCCAGGTGCTaGAAGCACCTCCTGGAGGAC | + |
Preference number: 4 (lower is better) Translates to: QGHIICLSPTSIIKQAYCKTSRC*KHLLED Trigger: GTCCTCCAGGAGGTGCTTCCAGCACCTGGAGGTTTT...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTAGGACTGTCCAAACTTaGAGGCATATCACCGTGGGC | + |
Preference number: 4 (lower is better) Translates to: QGHIICLSPTSIIKQAYCRTVQT*RHITVG Trigger: GCCCACGGTGATATGCCTCCAAGTTTGGACAGTCCT...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | TTCTGTGAAAACACACAAGGCCACATAATATGCTTATCTCCAACCTCAATCATACTTTCTTTCTGCCCCTaGACCACATCTGGGACAGGA | + |
Preference number: 4 (lower is better) Translates to: FCENTQGHIICLSPTSIILSFCP*TTSGTG Trigger: TCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAG...TATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTGATTGGGATGGCCCATaGCTTTCTTTCTGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLDWDGP*LSFCPW Trigger: CCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATC...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR TCA 90 bp | TTCTGTGAAAACACACAAGGCCACATAATATGCTTATCTCCAACCTCAATCATATGTGCTCATGGCCTGTaGATCATCTGCACTGAAGCT | + |
Preference number: 4 (lower is better) Translates to: FCENTQGHIICLSPTSIICAHGL*IICTEA Trigger: AGCTTCAGTGCAGATGATTCACAGGCCATGAGCACA...TATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR GCA 90 bp | TGTAAGAATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCGTCAGAGAAAAGTGCTaGGAGATCTATGTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: CKNVNSRLKVKVRLPDYCVREKC*EIYVGE Trigger: CTCACCAACATAGATCTCGCAGCACTTTTCTCTGAC...GCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATTCTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGACTTTCTTTCTGCCCCTaGACCACATCTGGGACAGGA | + |
Preference number: 4 (lower is better) Translates to: SRTCHYVKSTKVNISIVRLSFCP*TTSGTG Trigger: TCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAG...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGACTGGACAGCACAGATTaGGATGGCCCATGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: SRTCHYVKSTKVNISIVRLDSTD*DGPWLS Trigger: AGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAG...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CCA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTTTGTTCCACCTTTATTaGAACCAGCAGATCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: QGHIICLSPTSIIKQAYCLFHLY*NQQIWH Trigger: GTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAA...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CCA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTACACTGCCAGTTTCTTaGGTGGTGTCTGAAGAAGTT | + |
Preference number: 4 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLTLPVS*VVSEEV Trigger: AACTTCTTCAGACACCACCCAAGAAACTGGCAGTGT...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CCA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGATTGTTCCACCTTTATTaGAACCAGCAGATCTGGCAC | + |
Preference number: 4 (lower is better) Translates to: SRTCHYVKSTKVNISIVRLFHLY*NQQIWH Trigger: GTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAA...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR TCA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTAGATGTTTCTTAGAATaGATGTACAGACTGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLRCFLE*MYRLLR Trigger: TCGCAGCAGTCTGTACATTCATTCTAAGAAACATCT...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS GCA 90 bp | TCTTGGCGCCGGCTGTGCTGCCGCACCACGTGTGCCTTCATGCTATaGTTGGAGGTGAAGAGTCGGTTGCAGCTGGACACTGGGCAGCGG | + |
Preference number: 5 (lower is better) Translates to: SWRRLCCRTTCAFML*LEVKSRLQLDTGQR Trigger: CCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTACGGTGGTGAACTTCTaGCCGCAGCCGCCCACCGGG | + |
Preference number: 5 (lower is better) Translates to: HPVTCRHTLEAVGAAGATTVVNF*PQPPTG Trigger: CCCGGTGGGCGGCTGCGGCAAGAAGTTCACCACCGT...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS GCA 90 bp | CCTTCACCTGAGGGGTCATCCTGCAGAACAGGGATCTGGACACACTaGAGCCCAGCTGCAGGGGCTGGCACTGTCAGACCTCCACTGGGT | + |
Preference number: 5 (lower is better) Translates to: PSPEGSSCRTGIWTH*SPAAGAGTVRPPLG Trigger: ACCCAGTGGAGGTCTGACAGTGCCAGCCCCTGCAGCTGGGCTGCAGTGTGTCCAGATCCCTGTTCTGCAGGATGACCCCTCAGGTGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 90 bp | GGCTGTGCTGCCGCACCACGTGTGCCTTCATGCTATGCTTGGAGGTaGAGAGTCGGTTGCAGCTGGACACTGGGCAGCGGCTTTTCGGAG | + |
Preference number: 5 (lower is better) Translates to: GCAAAPRVPSCYAWR*RVGCSWTLGSGFSE Trigger: CTCCGAAAAGCCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS GCA 90 bp | GGGGTCATCCTGCAGAACAGGGATCTGGACACACTGCAGCCCAGCTaGAGGGGCTGGCACTGTCAGACCTCCACTGGGTACCATGAGAGT | + |
Preference number: 5 (lower is better) Translates to: GVILQNRDLDTLQPS*RGWHCQTSTGYHES Trigger: ACTCTCATGGTACCCAGTGGAGGTCTGACAGTGCCAGCCCCTGCAGCTGGGCTGCAGTGTGTCCAGATCCCTGTTCTGCAGGATGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTCCATCCAGCGGGCACTaGAAGGGCCGCCGGCCCTGG | + |
Preference number: 5 (lower is better) Translates to: PFVGSSTQVASRENSCPVPSSGH*KGRRPW Trigger: CCAGGGCCGGCGGCCCTTCAAGTGCCCGCTGGATGG...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTGAGGTGAAGAGTCGGTaGCAGCTGGACACTGGGCAG | + |
Preference number: 5 (lower is better) Translates to: HPVTCRHTLEAVGAAGATEVKSR*QLDTGQ Trigger: CTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTC...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 90 bp | GCCCAGCTGCAGGGGCTGGCACTGTCAGACCTCCACTGGGTACCATaGGAGTTCCACAGAAACAACTGTGCTGGCCTGAGTGGACATGAG | + |
Preference number: 5 (lower is better) Translates to: AQLQGLALSDLHWVP*EFHRNNCAGLSGHE Trigger: CTCATGTCCACTCAGGCCAGCACAGTTGTTTCTGTGGAACTCTCATGGTACCCAGTGGAGGTCTGACAGTGCCAGCCCCTGCAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS GCA 90 bp | CTGAGGTACAAGATCTTGGCGCCGGCTGTGCTGCCGCACCACGTGTaGCTTCATGCTATGCTTGGAGGTGAAGAGTCGGTTGCAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: LRYKILAPAVLPHHV*LHAMLGGEESVAAG Trigger: TCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCAAGATCTTGTACCTCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CCA 90 bp | CCTGTGCTCATGGCCTGTGAATCATCTGCACTGAAGCTGCCTGGTTaGAGAACCGTGGCCGATGTCCCAAGAACAAGAGGACGCCGGGAG | + |
Preference number: 5 (lower is better) Translates to: PVLMACESSALKLPG*RTVADVPRTRGRRE Trigger: CTCCCGGCGTCCTCTTGTTCTTGGGACATCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCATGAGCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203493.2 |
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CDS CCA 90 bp | CCTGGCCTCTCTGTAGAGCTGGACAGCACAGATTGGGATGGCCCATaGCTTTCTTTCTGCCCCTGGACCACATCTGGGACAGGAGACAAG | + |
Preference number: 5 (lower is better) Translates to: PGLSVELDSTDWDGP*LSFCPWTTSGTGDK Trigger: CTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGCTCTACAGAGAGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | ACACACACACGGCATGGGCAGGGTGCCTATCACAGAGGGCAACCTGTGGAGGCAGCTGCGAGATCTATGTaGGTGAGCTCACTTTGGCCT | + |
Preference number: 5 (lower is better) Translates to: THTRHGQGAYHRGQPVEAAARSM*VSSLWP Trigger: AGGCCAAAGTGAGCTCACCAACATAGATCTCGCAGC...TGCCTCCACAGGTTGCCCTCTGTGATAGGCACCCTGCCCATGCCGTGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 90 bp | GGCAGCCTACTGCTCCTGTGCTCATGGCCTGTGAATCATCTGCACTaGAGCTGCCTGGTTGGAGAACCGTGGCCGATGTCCCAAGAACAA | + |
Preference number: 5 (lower is better) Translates to: GSLLLLCSWPVNHLH*SCLVGEPWPMSQEQ Trigger: TTGTTCTTGGGACATCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | TGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTCAGATGGTGGGAGTTGAGCTaGGCGTGTGTGGGGAAGCGC | + |
Preference number: 5 (lower is better) Translates to: CREQHPGSIQRKLMPSFRWWELS*ACVGKR Trigger: GCGCTTCCCCACACACGCCAAGCTCAACTCCCACCA...TCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CATCCTGTCACTTGCAGACACACGCTGGAGGCTGTGGGAGCTGCTGGAGCAACTGGTGCTGTCAAGTTATaGCTGGGGGTCAAAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: HPVTCRHTLEAVGAAGATGAVKL*LGVKAG Trigger: TCCAGCTTTGACCCCCAGCAATAACTTGACAGCACC...AGTTGCTCCAGCAGCTCCCACAGCCTCCAGCGTGTGTCTGCAAGTGACAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS GCA 90 bp | GTAGAGCTGGACAGCACAGATTGGGATGGCCCATGGCTTTCTTTCTaGCCCTGGACCACATCTGGGACAGGAGACAAGTCTTGTTCCACC | + |
Preference number: 5 (lower is better) Translates to: VELDSTDWDGPWLSF*PWTTSGTGDKSCST Trigger: GGTGGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGCTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | CCTTTTGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTACCAGGAGGTCCTGGTaGTGGATGGTGACCGTGCCT | + |
Preference number: 5 (lower is better) Translates to: PFVGSSTQVASRENSCPVTRRSW*WMVTVP Trigger: AGGCACGGTCACCATCCACAACCAGGACCTCCTGGT...AACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | TCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTTGGTGGGAGTTGAGCTaGGCGTGTGTGGGGAAGCGC | + |
Preference number: 5 (lower is better) Translates to: SRLKVKVRLPDYCPGSICWWELS*ACVGKR Trigger: GCGCTTCCCCACACACGCCAAGCTCAACTCCCACCA...ACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | GGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGACGCCTTCATGCTATGCTaGGAGGTGAAGAGTCGGTTG | + |
Preference number: 5 (lower is better) Translates to: GSISRLLAGGRPANHLSDAFMLC*EVKSRL Trigger: CAACCGACTCTTCACCTCCAAGCATAGCATGAAGGC...GTCTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCGAGGACTGTCCAAACTaGGAGGCATATCACCGTGGG | + |
Preference number: 5 (lower is better) Translates to: QRLLHTGRLHTAILEIMAEDCPN*EAYHRG Trigger: CCCACGGTGATATGCCTCCAAGTTTGGACAGTCCTC...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS TCA 90 bp | CCAGGTGCTGTCAAGTTATTGCTGGGGGTCAAAGCTGGAGAGTCTTaGTTCAAGTTCCTCACAGGCAGAGCCACCAGGCAGCCTACTGCT | + |
Preference number: 5 (lower is better) Translates to: PGAVKLLLGVKAGES*FKFLTGRATRQPTA Trigger: AGCAGTAGGCTGCCTGGTGGCTCTGCCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAGCACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 90 bp | GCACAGCACCCTTCCACAGGGCATTCGAATGGCTTTGTTCCCAGGTaGGTGATACTGTGGCCCTTCAGATGCTCTGCTCTAGTGAATGAC | + |
Preference number: 5 (lower is better) Translates to: AQHPSTGHSNGFVPR*VILWPFRCSALVND Trigger: GTCATTCACTAGAGCAGAGCATCTGAAGGGCCACAGTATCACCCACCTGGGAACAAAGCCATTCGAATGCCCTGTGGAAGGGTGCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CCA 90 bp | CCTGTGCTCATGGCCTGTGAATCATCTGCACTGAAGCTGCCTGGTTaGAGAACCGTGGCCGATGTCCCAAGAACAAGAGGACTGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: PVLMACESSALKLPG*RTVADVPRTRGLSK Trigger: TTTGGACAGTCCTCTTGTTCTTGGGACATCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCATGAGCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | TCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGACCAGGAGGTCCTGGTaGTGGATGGTGACCGTGCCT | + |
Preference number: 5 (lower is better) Translates to: SKSKSGFQTIAQAPSVLLTRRSW*WMVTVP Trigger: AGGCACGGTCACCATCCACAACCAGGACCTCCTGGT...CAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | GAGGCTATAGACTTAACTGCTCCACATGGTTCTGTCTTGCTTTGTCTTTTCATTCCATCCAGCGGGCACTaGAAGGGCCGCCGGCCCTGG | + |
Preference number: 5 (lower is better) Translates to: EAIDLTAPHGSVLLCLFIPSSGH*KGRRPW Trigger: CCAGGGCCGGCGGCCCTTCAAGTGCCCGCTGGATGG...AATGAAAAGACAAAGCAAGACAGAACCATGTGGAGCAGTTAAGTCTATAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTGAGGTGAAGAGTCGGTaGCAGCTGGACACTGGGCAG | + |
Preference number: 5 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLEVKSR*QLDTGQ Trigger: CTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTC...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCGCTGGACAGCACAGATaGGGATGGCCCATGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVAGQHR*GWPMAF Trigger: GAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGC...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 90 bp | TGGTGTGGTACCAGGTGCTGTCAAGTTATTGCTGGGGGTCAAAGCTaGAGAGTCTTGATTCAAGTTCCTCACAGGCAGAGCCACCAGGCA | + |
Preference number: 5 (lower is better) Translates to: WCGTRCCQVIAGGQS*RVLIQVPHRQSHQA Trigger: TGCCTGGTGGCTCTGCCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAGCACCTGGTACCACACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 90 bp | CTGGACCACATCTGGGACAGGAGACAAGTCTTGTTCCACCTTTATTaGAACCAGCAGATCTGGCACACTGCCAGTTTCTTGGGTGGTGTC | + |
Preference number: 5 (lower is better) Translates to: LDHIWDRRQVLFHLY*NQQIWHTASFLGGV Trigger: GACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 90 bp | CTGGACAGCACAGATTGGGATGGCCCATGGCTTTCTTTCTGCCCCTaGACCACATCTGGGACAGGAGACAAGTCTTGTTCCACCTTTATT | + |
Preference number: 5 (lower is better) Translates to: LDSTDWDGPWLSFCP*TTSGTGDKSCSTFI Trigger: AATAAAGGTGGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | GAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGGAACGAGTGGATCCATaGGTCCTAAGGAGTTATTGT | + |
Preference number: 5 (lower is better) Translates to: EVLLAGYWQAAGQPITFQERVDP*VLRSYC Trigger: ACAATAACTCCTTAGGACCAATGGATCCACTCGTTC...CTGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 90 bp | AATGGTGAGGATCCCAGAGTTCAGTGCTTCATCCGACCCAGCTGTTaGACTGCTGCTATTAGCAGGTGTGTCAGAGAAAAGTGCTGCGAG | + |
Preference number: 5 (lower is better) Translates to: NGEDPRVQCFIRPSC*TAAISRCVREKCCE Trigger: CTCGCAGCACTTTTCTCTGACACACCTGCTAATAGCAGCAGTTCAACAGCTGGGTCGGATGAAGCACTGAACTCTGGGATCCTCACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | TCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTGGGTGCTGTCAAGTTATaGCTGGGGGTCAAAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: SKSKSGFQTIAQAPSVLLGAVKL*LGVKAG Trigger: TCCAGCTTTGACCCCCAGCAATAACTTGACAGCACC...CAGAAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | AGCATCCAGAGAAAACTCATGCCCAGTTTCAGAGCTCTCCCCAAATCCAAGAAAGCTGGACAGCACAGATaGGGATGGCCCATGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: SIQRKLMPSFRALPKSKKAGQHR*GWPMAF Trigger: GAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGC...TTTCTTGGATTTGGGGAGAGCTCTGAAACTGGGCATGAGTTTTCTCTGGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | AGAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCAGCAGGCTTTGTCATATaGTTTATTGCACCCAGGAAA | + |
Preference number: 5 (lower is better) Translates to: RGSISRLLAGGRPANHLSAGFVI*FIAPRK Trigger: TTTCCTGGGTGCAATAAACAATATGACAAAGCCTGC...TGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | TTCCCGAGGGCCTCTCAGACCTGTTGGGCATGTTCAGACATGCTGGTGATTTGGGCAGGCTTTGTCATATaGTTTATTGCACCCAGGAAA | + |
Preference number: 5 (lower is better) Translates to: FPRASQTCWACSDMLVIWAGFVI*FIAPRK Trigger: TTTCCTGGGTGCAATAAACAATATGACAAAGCCTGC...CCAAATCACCAGCATGTCTGAACATGCCCAACAGGTCTGAGAGGCCCTCGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | GGAAGTGAAATGAGTCTCTGCCCACCCACAGCAGCTGAGGTCTTGAAGCACAGCTTCAGTCGGCAGGCTTaGTCATATTGTTTATTGCAC | + |
Preference number: 5 (lower is better) Translates to: GSEMSLCPPTAAEVLKHSFSRQA*SYCLLH Trigger: GTGCAATAAACAATATGACAAAGCCTGCCGACTGAA...GCTGTGCTTCAAGACCTCAGCTGCTGTGGGTGGGCAGAGACTCATTTCACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | AGAGGTTCTATTAGCAGGCTACTGGCAGGCGGCAGGCCAGCCAATCACCTTTCATTGTGTCTTAGAAGTTaGGACATACTGGTGAAGGTC | + |
Preference number: 5 (lower is better) Translates to: RGSISRLLAGGRPANHLSLCLRS*DILVKV Trigger: GACCTTCACCAGTATGTCCAAACTTCTAAGACACAA...TGAAAGGTGATTGGCTGGCCTGCCGCCTGCCAGTAGCCTGCTAATAGAACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CAAAGACTGCTGCACACAGGCCGCCTTCACACAGCTATCCTCGAGATAATGGCCTTGTGTCTTAGAAGTTaGGACATACTGGTGAAGGTC | + |
Preference number: 5 (lower is better) Translates to: QRLLHTGRLHTAILEIMALCLRS*DILVKV Trigger: GACCTTCACCAGTATGTCCAAACTTCTAAGACACAA...GGCCATTATCTCGAGGATAGCTGTGTGAAGGCGGCCTGTGTGCAGCAGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATGCCTTCATGCTATGCTaGGAGGTGAAGAGTCGGTTG | + |
Preference number: 5 (lower is better) Translates to: LHLSFCTPERTVCIDRIHAFMLC*EVKSRL Trigger: CAACCGACTCTTCACCTCCAAGCATAGCATGAAGGC...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | TGTAGGGAGCAGCACCCAGGTAGCATCCAGAGAAAACTCATGCCCAGTTTCAGACAAAGCTGGAGAGTCTaGATTCAAGTTCCTCACAGG | + |
Preference number: 5 (lower is better) Translates to: CREQHPGSIQRKLMPSFRQSWRV*IQVPHR Trigger: CCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTG...TCTGAAACTGGGCATGAGTTTTCTCTGGATGCTACCTGGGTGCTGCTCCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS CCA 90 bp | CCTTTATTGGAACCAGCAGATCTGGCACACTGCCAGTTTCTTGGGTaGTGTCTGAAGAAGTTGGTGTGGTACCAGGTGCTGTCAAGTTAT | + |
Preference number: 5 (lower is better) Translates to: PLLEPADLAHCQFLG*CLKKLVWYQVLSSY Trigger: ATAACTTGACAGCACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTCCAATAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | GGGCAGTGTTGGCAGCAAGTGCCACACTGTCATCTGCCAATACAAAAAGTATTAGCTGCGAGATCTATGTaGGTGAGCTCACTTTGGCCT | + |
Preference number: 5 (lower is better) Translates to: GQCWQQVPHCHLPIQKVLAARSM*VSSLWP Trigger: AGGCCAAAGTGAGCTCACCAACATAGATCTCGCAGC...TAATACTTTTTGTATTGGCAGATGACAGTGTGGCACTTGCTGCCAACACTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCGAACGAGTGGATCCATaGGTCCTAAGGAGTTATTGT | + |
Preference number: 5 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVERVDP*VLRSYC Trigger: ACAATAACTCCTTAGGACCAATGGATCCACTCGTTC...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | GTCTCCACGGGGAAGACCAAATCATTCTGTGAAAACACACAAGGCCACATAATAGAGGACTGTCCAAACTaGGAGGCATATCACCGTGGG | + |
Preference number: 5 (lower is better) Translates to: VSTGKTKSFCENTQGHIIEDCPN*EAYHRG Trigger: CCCACGGTGATATGCCTCCAAGTTTGGACAGTCCTC...TATTATGTGGCCTTGTGTGTTTTCACAGAATGATTTGGTCTTCCCCGTGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCAAAGCTGGAGAGTCTaGATTCAAGTTCCTCACAGG | + |
Preference number: 5 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLQSWRV*IQVPHR Trigger: CCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTG...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | GACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCCTTCTTGTTCCACCTTTATaGGAACCAGCAGATCTGGCA | + |
Preference number: 5 (lower is better) Translates to: DSKSKSGFQTIAQAPSVLLVPPL*EPADLA Trigger: TGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAG...AAGGACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | CCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCCCAGGCTCCATCTGTCTTCAGTCGGCAGGCTTaGTCATATTGTTTATTGCAC | + |
Preference number: 5 (lower is better) Translates to: PDSKSKSGFQTIAQAPSVFSRQA*SYCLLH Trigger: GTGCAATAAACAATATGACAAAGCCTGCCGACTGAA...GACAGATGGAGCCTGGGCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
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CDS-3UTR CAA 90 bp | CTCCATCTGTCCTTCTGCACACCAGAAAGAACCGTCTGCATAGACAGGATTCATCTTGTTCCACCTTTATaGGAACCAGCAGATCTGGCA | + |
Preference number: 5 (lower is better) Translates to: LHLSFCTPERTVCIDRIHLVPPL*EPADLA Trigger: TGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAG...ATGAATCCTGTCTATGCAGACGGTTCTTTCTGGTGTGCAGAAGGACAGATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | TGTAAGAATGTCAATTCCAGACTCAAAGTCAAAGTCAGGCTTCCAGACTATTGCGCTGGACAGCACAGATaGGGATGGCCCATGGCTTTC | + |
Preference number: 5 (lower is better) Translates to: CKNVNSRLKVKVRLPDYCAGQHR*GWPMAF Trigger: GAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGC...GCAATAGTCTGGAAGCCTGACTTTGACTTTGAGTCTGGAATTGACATTCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | ACTAGATGTTTTGCCAGAGCTCAACCTGACTTTGGCTTCACTACAGCATACAGTCTCGGTAATCAGTTCTaGCTGAGCCCCCACTTTCCA | + |
Preference number: 5 (lower is better) Translates to: TRCFARAQPDFGFTTAYSLGNQF*LSPHFP Trigger: TGGAAAGTGGGGGCTCAGCAAGAACTGATTACCGAG...ACTGTATGCTGTAGTGAAGCCAAAGTCAGGTTGAGCTCTGGCAAAACATCTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | CAAGGCCACATAATATGCTTATCTCCAACCTCAATCATAAAACAAGCCTATTGTGCAGGAAAAGAGCTCTaGCTCCCTGAAGTGGGCTCG | + |
Preference number: 5 (lower is better) Translates to: QGHIICLSPTSIIKQAYCAGKEL*LPEVGS Trigger: CGAGCCCACTTCAGGGAGCAAGAGCTCTTTTCCTGC...ACAATAGGCTTGTTTTATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS-3UTR CAA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTGCAGGAAAAGAGCTCTaGCTCCCTGAAGTGGGCTCG | + |
Preference number: 5 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLAGKEL*LPEVGS Trigger: CGAGCCCACTTCAGGGAGCAAGAGCTCTTTTCCTGC...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
CDS-3UTR CAA 90 bp | TCTAGGACTTGTCACTACGTGAAAAGCACAAAGGTGAATATTTCAATAGTAAGAGGTGCTGTCAAGTTATaGCTGGGGGTCAAAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: SRTCHYVKSTKVNISIVRGAVKL*LGVKAG Trigger: TCCAGCTTTGACCCCCAGCAATAACTTGACAGCACC...TCTTACTATTGAAATATTCACCTTTGTGCTTTTCACGTAGTGACAAGTCCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS-3UTR CAA 90 bp | TTCTGTGAAAACACACAAGGCCACATAATATGCTTATCTCCAACCTCAATCATACTTGTTCCACCTTTATaGGAACCAGCAGATCTGGCA | + |
Preference number: 5 (lower is better) Translates to: FCENTQGHIICLSPTSIILVPPL*EPADLA Trigger: TGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAG...TATGATTGAGGTTGGAGATAAGCATATTATGTGGCCTTGTGTGTTTTCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
||
CDS-3UTR CAA 90 bp | TTCCATTGTAGACTGAGGAAAGTCAGACTCTCTCTAGGAATCTTTAAATTACTTCAAAGCTGGAGAGTCTaGATTCAAGTTCCTCACAGG | + |
Preference number: 5 (lower is better) Translates to: FHCRLRKVRLSLGIFKLLQSWRV*IQVPHR Trigger: CCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTG...AAGTAATTTAAAGATTCCTAGAGAGAGTCTGACTTTCCTCAGTCTACAATGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113539.8 |
||
CDS CCA 72 bp | GAGCTGCGCCGGGGGCGGCGGCCGGGACCTGTTCCGTaGGGCTCGCGCCCGAATCGGGCTCGGCCTCCTCCT | + |
Preference number: 6 (lower is better) Translates to: ELRRGRRPGPVP*GSRPNRARPPP Trigger: AGGAGGAGGCCGAGCCCGATTCGGGCGCGAGCCCCACGGAACAGGTCCCGGCCGCCGCCCCCGGCGCAGCTC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
||
CDS TCA 72 bp | GTGGGGCTCGCGCCCGAATCGGGCTCGGCCTCCTCCTaGCCATGGGTGTCGGCCGCGCGCGGCACTTCCAGC | + |
Preference number: 6 (lower is better) Translates to: VGLAPESGSASS*PWVSAARGTSS Trigger: GCTGGAAGTGCCGCGCGCGGCCGACACCCATGGTCAGGAGGAGGCCGAGCCCGATTCGGGCGCGAGCCCCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CAA 72 bp | AAGACGCCGCGGTCGAAGCGCACCAGGAGGTCCTGGTaGTGGATGGTGACCGTGCCTGCCAGAGCTGCGCCG | + |
Preference number: 6 (lower is better) Translates to: KTPRSKRTRRSW*WMVTVPARAAP Trigger: CGGCGCAGCTCTGGCAGGCACGGTCACCATCCACAACCAGGACCTCCTGGTGCGCTTCGACCGCGGCGTCTT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CCA 72 bp | GTGAAGACGCCGCGGTCGAAGCGCACCAGGAGGTCCTaGTTGTGGATGGTGACCGTGCCTGCCAGAGCTGCG | + |
Preference number: 6 (lower is better) Translates to: VKTPRSKRTRRS*LWMVTVPARAA Trigger: CGCAGCTCTGGCAGGCACGGTCACCATCCACAACCAGGACCTCCTGGTGCGCTTCGACCGCGGCGTCTTCAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CAA 90 bp | TGGCGCCGGCTGTGCTGCCGCACCACGTGTGCCTTCATGCTATGCTaGGAGGTGAAGAGTCGGTTGCAGCTGGACACTGGGCAGCGGCTT | + |
Preference number: 6 (lower is better) Translates to: WRRLCCRTTCAFMLC*EVKSRLQLDTGQRL Trigger: AAGCCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS TCA 72 bp | GCCGCACCACGTGTGCCTTCATGCTATGCTTGGAGGTaGAGAGTCGGTTGCAGCTGGACACTGGGCAGCGGC | + |
Preference number: 6 (lower is better) Translates to: AAPRVPSCYAWR*RVGCSWTLGSG Trigger: GCCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS GCA 72 bp | CTGCAGAACAGGGATCTGGACACACTGCAGCCCAGCTaGAGGGGCTGGCACTGTCAGACCTCCACTGGGTAC | + |
Preference number: 6 (lower is better) Translates to: LQNRDLDTLQPS*RGWHCQTSTGY Trigger: GTACCCAGTGGAGGTCTGACAGTGCCAGCCCCTGCAGCTGGGCTGCAGTGTGTCCAGATCCCTGTTCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS CCA 72 bp | GCCCCTGGCCTCTCTGTAGAGCTGGACAGCACAGATTaGGATGGCCCATGGCTTTCTTTCTGCCCCTGGACC | + |
Preference number: 6 (lower is better) Translates to: APGLSVELDSTD*DGPWLSFCPWT Trigger: GGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGCTCTACAGAGAGGCCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 90 bp | CGCACCACGTGTGCCTTCATGCTATGCTTGGAGGTGAAGAGTCGGTaGCAGCTGGACACTGGGCAGCGGCTTTTCGGAGTACCCACGTCC | + |
Preference number: 6 (lower is better) Translates to: RTTCAFMLCLEVKSR*QLDTGQRLFGVPTS Trigger: GGACGTGGGTACTCCGAAAAGCCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
||
CDS TCA 72 bp | AGACTGCCTGTGCCAGCACTGAGCTCTGAGTCCTTCTaGGCCCCTGGCCTCTCTGTAGAGCTGGACAGCACA | + |
Preference number: 6 (lower is better) Translates to: RLPVPALSSESF*APGLSVELDST Trigger: TGTGCTGTCCAGCTCTACAGAGAGGCCAGGGGCTCAGAAGGACTCAGAGCTCAGTGCTGGCACAGGCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 72 bp | CTGTGCTGCCGCACCACGTGTGCCTTCATGCTATGCTaGGAGGTGAAGAGTCGGTTGCAGCTGGACACTGGG | + |
Preference number: 6 (lower is better) Translates to: LCCRTTCAFMLC*EVKSRLQLDTG Trigger: CCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS GCA 72 bp | AAGATCTTGGCGCCGGCTGTGCTGCCGCACCACGTGTaGCTTCATGCTATGCTTGGAGGTGAAGAGTCGGTT | + |
Preference number: 6 (lower is better) Translates to: KILAPAVLPHHV*LHAMLGGEESV Trigger: AACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCCGGCGCCAAGATCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS GCA 72 bp | TACCTGTGCAGTCTCCAGTCCAGCAAAACCTCCAGGTaGTGGAAGCACCTCCTGGAGGACGTAGACAGGCAG | + |
Preference number: 6 (lower is better) Translates to: YLCSLQSSKTSR*WKHLLEDVDRQ Trigger: CTGCCTGTCTACGTCCTCCAGGAGGTGCTTCCAGCACCTGGAGGTTTTGCTGGACTGGAGACTGCACAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 72 bp | CACCAGGCAGCCTACTGCTCCTGTGCTCATGGCCTGTaGATCATCTGCACTGAAGCTGCCTGGTTGGAGAAC | + |
Preference number: 6 (lower is better) Translates to: HQAAYCSCAHGL*IICTEAAWLEN Trigger: GTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCTGCCTGGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS TCA 72 bp | CAGGGGCTGGCACTGTCAGACCTCCACTGGGTACCATaGGAGTTCCACAGAAACAACTGTGCTGGCCTGAGT | + |
Preference number: 6 (lower is better) Translates to: QGLALSDLHWVP*EFHRNNCAGLS Trigger: ACTCAGGCCAGCACAGTTGTTTCTGTGGAACTCTCATGGTACCCAGTGGAGGTCTGACAGTGCCAGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS CAA 72 bp | TGTGCCTTCATGCTATGCTTGGAGGTGAAGAGTCGGTaGCAGCTGGACACTGGGCAGCGGCTTTTCGGAGTA | + |
Preference number: 6 (lower is better) Translates to: CAFMLCLEVKSR*QLDTGQRLFGV Trigger: TACTCCGAAAAGCCGCTGCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CAA 90 bp | GGAGAACCGTGGCCGATGTCCCAAGAACAAGAGGACTGTCCAAACTaGGAGGCATATCACCGTGGGCCACTAGAACGAGTGGATCCATTG | + |
Preference number: 6 (lower is better) Translates to: GEPWPMSQEQEDCPN*EAYHRGPLERVDPL Trigger: CAATGGATCCACTCGTTCTAGTGGCCCACGGTGATATGCCTCCAAGTTTGGACAGTCCTCTTGTTCTTGGGACATCGGCCACGGTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CAA 90 bp | ACCAGGTGCTGTCAAGTTATTGCTGGGGGTCAAAGCTGGAGAGTCTaGATTCAAGTTCCTCACAGGCAGAGCCACCAGGCAGCCTACTGC | + |
Preference number: 6 (lower is better) Translates to: TRCCQVIAGGQSWRV*IQVPHRQSHQAAYC Trigger: GCAGTAGGCTGCCTGGTGGCTCTGCCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAGCACCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 72 bp | CCTTCCACAGGGCATTCGAATGGCTTTGTTCCCAGGTaGGTGATACTGTGGCCCTTCAGATGCTCTGCTCTA | + |
Preference number: 6 (lower is better) Translates to: PSTGHSNGFVPR*VILWPFRCSAL Trigger: TAGAGCAGAGCATCTGAAGGGCCACAGTATCACCCACCTGGGAACAAAGCCATTCGAATGCCCTGTGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CCA 72 bp | ATGGCCTGTGAATCATCTGCACTGAAGCTGCCTGGTTaGAGAACCGTGGCCGATGTCCCAAGAACAAGAGGA | + |
Preference number: 6 (lower is better) Translates to: MACESSALKLPG*RTVADVPRTRG Trigger: TCCTCTTGTTCTTGGGACATCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 72 bp | GAACCAGCAGATCTGGCACACTGCCAGTTTCTTGGGTaGTGTCTGAAGAAGTTGGTGTGGTACCAGGTGCTG | + |
Preference number: 6 (lower is better) Translates to: EPADLAHCQFLG*CLKKLVWYQVL Trigger: CAGCACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 72 bp | ACAGATTGGGATGGCCCATGGCTTTCTTTCTGCCCCTaGACCACATCTGGGACAGGAGACAAGTCTTGTTCC | + |
Preference number: 6 (lower is better) Translates to: TDWDGPWLSFCP*TTSGTGDKSCS Trigger: GGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 72 bp | TGGCCCATGGCTTTCTTTCTGCCCCTGGACCACATCTaGGACAGGAGACAAGTCTTGTTCCACCTTTATTGG | + |
Preference number: 6 (lower is better) Translates to: WPMAFFLPLDHI*DRRQVLFHLYW Trigger: CCAATAAAGGTGGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 90 bp | GCAGATCTGGCACACTGCCAGTTTCTTGGGTGGTGTCTGAAGAAGTaGGTGTGGTACCAGGTGCTGTCAAGTTATTGCTGGGGGTCAAAG | + |
Preference number: 6 (lower is better) Translates to: ADLAHCQFLGWCLKK*VWYQVLSSYCWGSK Trigger: CTTTGACCCCCAGCAATAACTTGACAGCACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 90 bp | GCTTTCTTTCTGCCCCTGGACCACATCTGGGACAGGAGACAAGTCTaGTTCCACCTTTATTGGAACCAGCAGATCTGGCACACTGCCAGT | + |
Preference number: 6 (lower is better) Translates to: AFFLPLDHIWDRRQV*FHLYWNQQIWHTAS Trigger: ACTGGCAGTGTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAGACTTGTCTCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 90 bp | CTGCTATTAGCAGGTGTGTCAGAGAAAAGTGCTGCGAGATCTATGTaGGTGAGCTCACTTTGGCCTGGGCTACTCAGTTCACTGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: LLLAGVSEKSAARSM*VSSLWPGLLSSLLG Trigger: ACCCAGCAGTGAACTGAGTAGCCCAGGCCAAAGTGAGCTCACCAACATAGATCTCGCAGCACTTTTCTCTGACACACCTGCTAATAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS TCA 72 bp | CAGATCTGGCACACTGCCAGTTTCTTGGGTGGTGTCTaGAGAAGTTGGTGTGGTACCAGGTGCTGTCAAGTT | + |
Preference number: 6 (lower is better) Translates to: QIWHTASFLGGV*RSWCGTRCCQV Trigger: AACTTGACAGCACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS TCA 72 bp | AACAACTGTGCTGGCCTGAGTGGACATGAGGAGGGTTaGTCGTGCCACCTTTTACTTTCCTGTGAGCAGAGT | + |
Preference number: 6 (lower is better) Translates to: NNCAGLSGHEEG*SCHLLLSCEQS Trigger: ACTCTGCTCACAGGAAAGTAAAAGGTGGCACGATCAACCCTCCTCATGTCCACTCAGGCCAGCACAGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 72 bp | GTTCCACAGAAACAACTGTGCTGGCCTGAGTGGACATaGGGAGGGTTGATCGTGCCACCTTTTACTTTCCTG | + |
Preference number: 6 (lower is better) Translates to: VPQKQLCWPEWT*GGLIVPPFTFL Trigger: CAGGAAAGTAAAAGGTGGCACGATCAACCCTCCTCATGTCCACTCAGGCCAGCACAGTTGTTTCTGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS TCA 72 bp | TACCATGAGAGTTCCACAGAAACAACTGTGCTGGCCTaGGTGGACATGAGGAGGGTTGATCGTGCCACCTTT | + |
Preference number: 6 (lower is better) Translates to: YHESSTETTVLA*VDMRRVDRATF Trigger: AAAGGTGGCACGATCAACCCTCCTCATGTCCACTCAGGCCAGCACAGTTGTTTCTGTGGAACTCTCATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075117.10 |
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CDS CCA 72 bp | TGCCAGTTTCTTGGGTGGTGTCTGAAGAAGTTGGTGTaGTACCAGGTGCTGTCAAGTTATTGCTGGGGGTCA | + |
Preference number: 6 (lower is better) Translates to: CQFLGWCLKKLV*YQVLSSYCWGS Trigger: TGACCCCCAGCAATAACTTGACAGCACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CCA 72 bp | ATTGGAACCAGCAGATCTGGCACACTGCCAGTTTCTTaGGTGGTGTCTGAAGAAGTTGGTGTGGTACCAGGT | + |
Preference number: 6 (lower is better) Translates to: IGTSRSGTLPVS*VVSEEVGVVPG Trigger: ACCTGGTACCACACCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS TCA 72 bp | GATACTGTGGCCCTTCAGATGCTCTGCTCTAGTGAATaGCTTGCCACAACCTTCAACAGGGCAAGTGAACCT | + |
Preference number: 6 (lower is better) Translates to: DTVALQMLCSSE*LATTFNRASEP Trigger: AGGTTCACTTGCCCTGTTGAAGGTTGTGGCAAGTCATTCACTAGAGCAGAGCATCTGAAGGGCCACAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045740.8 ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS TCA 72 bp | GATCCCAGAGTTCAGTGCTTCATCCGACCCAGCTGTTaGACTGCTGCTATTAGCAGGTGTGTCAGAGAAAAG | + |
Preference number: 6 (lower is better) Translates to: DPRVQCFIRPSC*TAAISRCVREK Trigger: CTTTTCTCTGACACACCTGCTAATAGCAGCAGTTCAACAGCTGGGTCGGATGAAGCACTGAACTCTGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |
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CDS CCA 72 bp | ATCTGGGACAGGAGACAAGTCTTGTTCCACCTTTATTaGAACCAGCAGATCTGGCACACTGCCAGTTTCTTG | + |
Preference number: 6 (lower is better) Translates to: IWDRRQVLFHLY*NQQIWHTASFL Trigger: CAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAGACTTGTCTCCTGTCCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 ENSMUST00000203493.2 |
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CDS CAA 72 bp | ACTAGAACGAGTGGATCCATTGGTCCTAAGGAGTTATaGTTAGTAGGGAGATTCCCTCCCAGAGAAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: TRTSGSIGPKEL*LVGRFPPREEL Trigger: GAGCTCTTCTCTGGGAGGGAATCTCCCTACTAACAATAACTCCTTAGGACCAATGGATCCACTCGTTCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075117.10 ENSMUST00000113539.8 |