Pregenerated sensors for ZWINT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019923Ensembl transcript IDs: ENSMUST00000020081.11, ENSMUST00000105431.8, ENSMUST00000160337.2, ENSMUST00000219352.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCCATGGCAACTGCCACTTCCCCTGGAATGTTCTTCCTTCCCTaGTGTCTTCTCACTCAATGCTCTCGTTGCAGGACAGCTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: HPMATATSPGMFFLP*CLLTQCSRCRTAVQ Trigger: CTGTACAGCTGTCCTGCAACGAGAGCATTGAGTGAGAAGACAGCAGGGAAGGAAGAACATTCCAGGGGAAGTGGCAGTTGCCATGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 90 bp | GAATCAGTCAACTTGAAGCCGGGTTATGAACCAGTACAGCGGAGCTaGCCCAGCCAGCCGGCCAGTTTAGTAACTACAAAGGGTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: ESVNLKPGYEPVQRS*PSQPASLVTTKGEL Trigger: AAGCTCACCCTTTGTAGTTACTAAACTGGCCGGCTGGCTGGGTCAGCTCCGCTGTACTGGTTCATAACCCGGCTTCAAGTTGACTGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CCA 90 bp | ACTTCCAGGCTTAGGCCTAGAGATACAACAGTGAAGGAACCAATCTaGTCTCAGCCCAAGCAGGGTATGAATACGGCTCTCTTCTCATCC | + |
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Preference number: 1 (lower is better) Translates to: TSRLRPRDTTVKEPI*SQPKQGMNTALFSS Trigger: GGATGAGAAGAGAGCCGTATTCATACCCTGCTTGGGCTGAGACCAGATTGGTTCCTTCACTGTTGTATCTCTAGGCCTAAGCCTGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR GCA 90 bp | CCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGTTaGAGGTTCTTCAGGCAAAGAACAGGTTTGCTGCATCTCACTACG | + |
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Preference number: 1 (lower is better) Translates to: PYPCNGSTIQATKSC*RFFRQRTGLLHLTT Trigger: CGTAGTGAGATGCAGCAAACCTGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR GCA 90 bp | ATGCATGCGTGTGAGTTTCACTGGTACACTTTTACAGAGACAGGTTaGAAGGACAGCAAGTTAGACACAGGTGAAGACAGAACAAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: MHACEFHWYTFTETG*KDSKLDTGEDRTSQ Trigger: CTGGCTTGTTCTGTCTTCACCTGTGTCTAACTTGCTGTCCTTGCAACCTGTCTCTGTAAAAGTGTACCAGTGAAACTCACACGCATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR TCA 90 bp | AAGTCAATGTGGTCCTTATCAGTTTATAGACTCAAAGCTTCTCACTaGCATGTCTCCCTCAGAGAGGCTCATGTCCAGTATCCTGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: KSMWSLSVYRLKASH*HVSLREAHVQYPVS Trigger: GCTAACAGGATACTGGACATGAGCCTCTCTGAGGGAGACATGTCAGTGAGAAGCTTTGAGTCTATAAACTGATAAGGACCACATTGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 90 bp | TCTTCAGGCAAAGAACAGGTTTGCTGCATCTCACTACGTCCATCCTaGAGATCTGCTAACAGGCTTCACAACCAGCTTTCAATCTTAACT | + |
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Preference number: 1 (lower is better) Translates to: SSGKEQVCCISLRPS*RSANRLHNQLSILT Trigger: AGTTAAGATTGAAAGCTGGTTGTGAAGCCTGTTAGCAGATCTTCAGGATGGACGTAGTGAGATGCAGCAAACCTGTTCTTTGCCTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR CCA 90 bp | TCTTGGCTCAATTCCAACCTCTCACTATCTAGCCCTCACAGTCCTTaGCAGGCTAACTCTCACAAGCTAGCACTATTTTTATGCTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: SWLNSNLSLSSPHSP*QANSHKLALFLCSL Trigger: TAAAGAGCATAAAAATAGTGCTAGCTTGTGAGAGTTAGCCTGCCAAGGACTGTGAGGGCTAGATAGTGAGAGGTTGGAATTGAGCCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CCA 90 bp | AACTATCTTCACTACTCCTCCACCTATTTTATCATCAGTGTGTCTTaGCTCAATTCCAACCTCTCACTATCTAGCCCTCACAGTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: NYLHYSSTYFIISVS*LNSNLSLSSPHSPW Trigger: CCAAGGACTGTGAGGGCTAGATAGTGAGAGGTTGGAATTGAGCCAAGACACACTGATGATAAAATAGGTGGAGGAGTAGTGAAGATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 90 bp | CACTTTTACAGAGACAGGTTGCAAGGACAGCAAGTTAGACACAGGTaGAGACAGAACAAGCCAGAATATACTGTCAAAGTTAGCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: HFYRDRLQGQQVRHR*RQNKPEYTVKVSMR Trigger: TCTCATGCTAACTTTGACAGTATATTCTGGCTTGTTCTGTCTTCACCTGTGTCTAACTTGCTGTCCTTGCAACCTGTCTCTGTAAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR TCA 90 bp | ACAGGTGAAGACAGAACAAGCCAGAATATACTGTCAAAGTTAGCATaGGACAAAACACAACAGTTCACTGAAAAGCCAAGAGATGCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: TGEDRTSQNILSKLA*DKTQQFTEKPRDAR Trigger: TCTGGCATCTCTTGGCTTTTCAGTGAACTGTTGTGTTTTGTCTCATGCTAACTTTGACAGTATATTCTGGCTTGTTCTGTCTTCACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CCA 90 bp | CTTTTACACAATACTGAAGAGAGTGAGGTCACAGTCACAAAGGCATaGATTCACATTCTGGATTCAATAGACTCAAGTTCGGAATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LLHNTEESEVTVTKA*IHILDSIDSSSECS Trigger: ACTGCATTCCGAACTTGAGTCTATTGAATCCAGAATGTGAATCCATGCCTTTGTGACTGTGACCTCACTCTCTTCAGTATTGTGTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR GCA 90 bp | TCCAGTATCCTGTTAGCTGGGCTCAGTCCTCACGCTATGGCTTTTTaGTTTATCTTAGTGCAGAATTATTTTCCTTTACTCATGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: SSILLAGLSPHAMAF*FILVQNYFPLLMHF Trigger: AAAATGCATGAGTAAAGGAAAATAATTCTGCACTAAGATAAAGCAAAAAGCCATAGCGTGAGGACTGAGCCCAGCTAACAGGATACTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGAGGACAGCACAGGAGAGAGGCTACCTAAGAGCAGTACAGCAGAGAGAAGTGAAGGAACCAATCTaGTCTCAGCCCAAGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LRRTAQERGYLRAVQQREVKEPI*SQPKQG Trigger: ACCCTGCTTGGGCTGAGACCAGATTGGTTCCTTCAC...TTCTCTCTGCTGTACTGCTCTTAGGTAGCCTCTCTCCTGTGCTGTCCTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGGACAGCACAGGAGAGAGGCTACCTAAGAGCAGTACAGCAGAGAGAACCAACACAACAGTTCACTaGAAAGCCAAGAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QEDSTGERLPKSSTAERTNTTVH*KAKRCQ Trigger: CTGGCATCTCTTGGCTTTTCAGTGAACTGTTGTGTT...GGTTCTCTCTGCTGTACTGCTCTTAGGTAGCCTCTCTCCTGTGCTGTCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CAA 90 bp | ACTGCCAGTCTAATTGAGGGGCAAAGTGATGAATCAGAGAGAGATTaGACAGCACGACTCAGGAGGACAGCACAGGAGAGAGGCTACCTA | + |
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Preference number: 2 (lower is better) Translates to: TASLIEGQSDESERD*TARLRRTAQERGYL Trigger: TAGGTAGCCTCTCTCCTGTGCTGTCCTCCTGAGTCGTGCTGTCAAATCTCTCTCTGATTCATCACTTTGCCCCTCAATTAGACTGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGTTGCCACCCCATGGCAACTaGCACTTCCCCTGGAATGTT | + |
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Preference number: 2 (lower is better) Translates to: RKSISMQWVNNPGHKVLLPPHGN*HFPWNV Trigger: AACATTCCAGGGGAAGTGGCAGTTGCCATGGGGTGG...CAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CAA 90 bp | TGGAATGTTCTTCCTTCCCTGCTGTCTTCTCACTCAATGCTCTCGTaGCAGGACAGCTGTACAGTAGGTGGATTTAACTTTGCGGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: WNVLPSLLSSHSMLS*QDSCTVGGFNFAVY Trigger: GTAAACCGCAAAGTTAAATCCACCTACTGTACAGCTGTCCTGCAACGAGAGCATTGAGTGAGAAGACAGCAGGGAAGGAAGAACATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CAA 90 bp | TCCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGTaGCAGGTTCTTCAGGCAAAGAACAGGTTTGCTGCATCTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: SISMQWVNNPGHKVL*QVLQAKNRFAASHY Trigger: GTAGTGAGATGCAGCAAACCTGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGAACTGCCACTTCCCCTaGAATGTTCTTCCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: QSKVSQKVHIHAMGQQSRNCHFP*NVLPSL Trigger: CAGGGAAGGAAGAACATTCCAGGGGAAGTGGCAGTT...CCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGAGGACAGCACAGGAGAGAGGCTACCTAAGAGCAGTACAGCAGAGAGAACAGATTGAATCAGCTTaGAGAATTAGATTGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: LRRTAQERGYLRAVQQREQIESA*RIRLYR Trigger: TCTGTACAATCTAATTCTCCAAGCTGATTCAATCTG...TTCTCTCTGCTGTACTGCTCTTAGGTAGCCTCTCTCCTGTGCTGTCCTCCTGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR-3UTR CCA 90 bp | ATACTTCAGCAACTATCTTCACTACTCCTCCACCTATTTTATCATCAGTGTGTCAGCCCTCACAGTCCTTaGCAGGCTAACTCTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: ILQQLSSLLLHLFYHQCVSPHSP*QANSHK Trigger: CTTGTGAGAGTTAGCCTGCCAAGGACTGTGAGGGCT...GACACACTGATGATAAAATAGGTGGAGGAGTAGTGAAGATAGTTGCTGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTCAAGTGTACCACTTGGACAAATCTCAATTGTACACCTACCATAAGCTGTCCTCCTTCACTGAGTaGTTTGGAAGCACTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: SGQVYHLDKSQLYTYHKLSSFTE*FGSTHF Trigger: GAAATGAGTGCTTCCAAACCACTCAGTGAAGGAGGA...CAGCTTATGGTAGGTGTACAATTGAGATTTGTCCAAGTGGTACACTTGACCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CAA 90 bp | GTCCAGTATCCTGTTAGCTGGGCTCAGTCCTCACGCTATGGCTTTTaGCTTTATCTTAGTGCAGAATTATTTTCCTTTACTCATGCATTT | + |
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Preference number: 2 (lower is better) Translates to: VQYPVSWAQSSRYGF*LYLSAELFSFTHAF Trigger: AAATGCATGAGTAAAGGAAAATAATTCTGCACTAAGATAAAGCAAAAAGCCATAGCGTGAGGACTGAGCCCAGCTAACAGGATACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CAA 90 bp | AGTCCCTTCTCCTTAGCTCTTGAAGACATCATCAAACCATCTCACTaGTCAAGCTATAAGTATATCAGGCCACTTCTCATTCTCAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SPFSLALEDIIKPSH*SSYKYIRPLLILSR Trigger: TCTACTGAGAATGAGAAGTGGCCTGATATACTTATAGCTTGACAAGTGAGATGGTTTGATGATGTCTTCAAGAGCTAAGGAGAAGGGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAAAACTTTTACACAATACTGAAGAGAGTGAGGTCACAGTCACAAAGGCAGTACAGTTCTGTTCCTaGAGTCCATCAGACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FLKLLHNTEESEVTVTKAVQFCS*SPSDFP Trigger: TGGAAAGTCTGATGGACTTCAGGAACAGAACTGTAC...TGCCTTTGTGACTGTGACCTCACTCTCTTCAGTATTGTGTAAAAGTTTTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAAAACTTTTACACAATACTGAAGAGAGTGAGGTCACAGTCACAAAGGCACTGTCAAAGTTAGCATaGGACAAAACACAACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FLKLLHNTEESEVTVTKALSKLA*DKTQQF Trigger: GAACTGTTGTGTTTTGTCTCATGCTAACTTTGACAG...TGCCTTTGTGACTGTGACCTCACTCTCTTCAGTATTGTGTAAAAGTTTTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CAA 90 bp | ATGTCAGCACAGAACTGGATCCTACCAGTTCAGAATAAAGAAACTTaGGAATTCCCCCAATATATAGTTCAAACACTTAACGTCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: MSAQNWILPVQNKET*EFPQYIVQTLNVQS Trigger: TGATTGGACGTTAAGTGTTTGAACTATATATTGGGGGAATTCCAAAGTTTCTTTATTCTGAACTGGTAGGATCCAGTTCTGTGCTGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACAGAGTAAGACCCAATTAAGTATCACTGGTGTCCTCAGACTCAAAAGTGAATACGGTAGATTGTaGTATAACAACAACATCAAC | + |
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Preference number: 2 (lower is better) Translates to: KAQSKTQLSITGVLRLKSEYGRL*YNNNIN Trigger: GTTGATGTTGTTGTTATAGCACAATCTACCGTATTC...ACTTTTGAGTCTGAGGACACCAGTGATACTTAATTGGGTCTTACTCTGTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAGCAACTATCTTCACTACTCCTCCACCTATTTTATCATCAGTGTGTCTTATTTTCCTTTACTCATaGATTTTCATAACCACCACC | + |
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Preference number: 2 (lower is better) Translates to: TSATIFTTPPPILSSVCLIFLYS*IFITTT Trigger: GGTGGTGGTTATGAAAATGCATGAGTAAAGGAAAAT...AAGACACACTGATGATAAAATAGGTGGAGGAGTAGTGAAGATAGTTGCTGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 72 bp | AACTTGAAGCCGGGTTATGAACCAGTACAGCGGAGCTaGCCCAGCCAGCCGGCCAGTTTAGTAACTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: NLKPGYEPVQRS*PSQPASLVTTK Trigger: CTTTGTAGTTACTAAACTGGCCGGCTGGCTGGGTCAGCTCCGCTGTACTGGTTCATAACCCGGCTTCAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CCA 72 bp | CTTAGGCCTAGAGATACAACAGTGAAGGAACCAATCTaGTCTCAGCCCAAGCAGGGTATGAATACGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LRPRDTTVKEPI*SQPKQGMNTAL Trigger: GAGAGCCGTATTCATACCCTGCTTGGGCTGAGACCAGATTGGTTCCTTCACTGTTGTATCTCTAGGCCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR TCA 72 bp | AAAGAACAGGTTTGCTGCATCTCACTACGTCCATCCTaGAGATCTGCTAACAGGCTTCACAACCAGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: KEQVCCISLRPS*RSANRLHNQLS Trigger: TGAAAGCTGGTTGTGAAGCCTGTTAGCAGATCTTCAGGATGGACGTAGTGAGATGCAGCAAACCTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR CCA 72 bp | CACTACTCCTCCACCTATTTTATCATCAGTGTGTCTTaGCTCAATTCCAACCTCTCACTATCTAGCCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: HYSSTYFIISVS*LNSNLSLSSPH Trigger: GTGAGGGCTAGATAGTGAGAGGTTGGAATTGAGCCAAGACACACTGATGATAAAATAGGTGGAGGAGTAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 72 bp | TGGTCCTTATCAGTTTATAGACTCAAAGCTTCTCACTaGCATGTCTCCCTCAGAGAGGCTCATGTCCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: WSLSVYRLKASH*HVSLREAHVQY Trigger: ATACTGGACATGAGCCTCTCTGAGGGAGACATGTCAGTGAGAAGCTTTGAGTCTATAAACTGATAAGGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR GCA 72 bp | TGTGAGTTTCACTGGTACACTTTTACAGAGACAGGTTaGAAGGACAGCAAGTTAGACACAGGTGAAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: CEFHWYTFTETG*KDSKLDTGEDR Trigger: TCTGTCTTCACCTGTGTCTAACTTGCTGTCCTTGCAACCTGTCTCTGTAAAAGTGTACCAGTGAAACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CCA 72 bp | AATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATaGGTCAACAATCCAGGCCACAAAGTCTTGTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: NLRFPRKSISMQ*VNNPGHKVLLQ Trigger: CTGCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| 3UTR CCA 72 bp | AATTCCAACCTCTCACTATCTAGCCCTCACAGTCCTTaGCAGGCTAACTCTCACAAGCTAGCACTATTTTTA | + |
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Preference number: 3 (lower is better) Translates to: NSNLSLSSPHSP*QANSHKLALFL Trigger: TAAAAATAGTGCTAGCTTGTGAGAGTTAGCCTGCCAAGGACTGTGAGGGCTAGATAGTGAGAGGTTGGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR-3UTR CAA 90 bp | TGCATGCATGCGTGTGAGTTTCACTGGTACACTTTTACAGAGACAGGTTGCAAGGCTTGGAGAATTAGATaGTACAGAGGCAACAAACTT | + |
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Preference number: 3 (lower is better) Translates to: CMHACEFHWYTFTETGCKAWRIR*YRGNKL Trigger: AAGTTTGTTGCCTCTGTACAATCTAATTCTCCAAGC...CTTGCAACCTGTCTCTGTAAAAGTGTACCAGTGAAACTCACACGCATGCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR CCA 72 bp | GGTTTACAAAGCTGCTTCGTCTCCTCCTTCACTGAGTaGTTTGGAAGCACTCATTTCTTTTTCAAGATGATC | + |
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Preference number: 3 (lower is better) Translates to: GLQSCFVSSFTE*FGSTHFFFKMI Trigger: GATCATCTTGAAAAAGAAATGAGTGCTTCCAAACCACTCAGTGAAGGAGGAGACGAAGCAGCTTTGTAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 72 bp | GTCAAAGTTAGCATGAGACAAAACACAACAGTTCACTaGAAAGCCAAGAGATGCCAGATTGAATCAGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: VKVSMRQNTTVH*KAKRCQIESAW Trigger: CCAAGCTGATTCAATCTGGCATCTCTTGGCTTTTCAGTGAACTGTTGTGTTTTGTCTCATGCTAACTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR GCA 72 bp | CTGTTAGCTGGGCTCAGTCCTCACGCTATGGCTTTTTaGTTTATCTTAGTGCAGAATTATTTTCCTTTACTC | + |
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Preference number: 3 (lower is better) Translates to: LLAGLSPHAMAF*FILVQNYFPLL Trigger: GAGTAAAGGAAAATAATTCTGCACTAAGATAAAGCAAAAAGCCATAGCGTGAGGACTGAGCCCAGCTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CCA 72 bp | AATACTGAAGAGAGTGAGGTCACAGTCACAAAGGCATaGATTCACATTCTGGATTCAATAGACTCAAGTTCG | + |
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Preference number: 3 (lower is better) Translates to: NTEESEVTVTKA*IHILDSIDSSS Trigger: CGAACTTGAGTCTATTGAATCCAGAATGTGAATCCATGCCTTTGTGACTGTGACCTCACTCTCTTCAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR-3UTR CAA 90 bp | ACTTCAGCAACTATCTTCACTACTCCTCCACCTATTTTATCATCAGTGTGTCTTGGTCAAGTGTACCACTaGGACAAATCTCAATTGTAC | + |
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Preference number: 3 (lower is better) Translates to: TSATIFTTPPPILSSVCLGQVYH*DKSQLY Trigger: GTACAATTGAGATTTGTCCAAGTGGTACACTTGACC...AAGACACACTGATGATAAAATAGGTGGAGGAGTAGTGAAGATAGTTGCTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR CCA 72 bp | ATCATCCCTGGTCTAATCTGTACAGAGAAGTCAATGTaGTCCTTATCAGTTTATAGACTCAAAGCTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: IIPGLICTEKSM*SLSVYRLKASH Trigger: GTGAGAAGCTTTGAGTCTATAAACTGATAAGGACCACATTGACTTCTCTGTACAGATTAGACCAGGGATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| 3UTR TCA 72 bp | GACAGAACAAGCCAGAATATACTGTCAAAGTTAGCATaGGACAAAACACAACAGTTCACTGAAAAGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: DRTSQNILSKLA*DKTQQFTEKPR Trigger: TCTTGGCTTTTCAGTGAACTGTTGTGTTTTGTCTCATGCTAACTTTGACAGTATATTCTGGCTTGTTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
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| 3UTR TCA 72 bp | CTGAGTGGTTTGGAAGCACTCATTTCTTTTTCAAGATaGTCCATAAATGCGGTGCAAAAAGGCAAATTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LSGLEALISFSR*SINAVQKGKFH Trigger: GTGAAATTTGCCTTTTTGCACCGCATTTATGGATCATCTTGAAAAAGAAATGAGTGCTTCCAAACCACTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
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| CDS-3UTR GCA 90 bp | GGGCAAAGTGATGAATCAGAGAGAGATTTGACAGCACGACTCAGGAGGACAGCAAGCTTCTCCTGTTCCTaGCCCGCTTGCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQSDESERDLTARLRRTASFSCS*PACCFK Trigger: CTTGAAGCAGCAAGCGGGGCAGGAACAGGAGAAGCT...TGCTGTCCTCCTGAGTCGTGCTGTCAAATCTCTCTCTGATTCATCACTTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR CCA 90 bp | AGAGATTTGACAGCACGACTCAGGAGGACAGCACAGGAGAGAGGCTACCTAAGACTACAGGTTCTAGAATaGCTGCTGCCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLTARLRRTAQERGYLRLQVLE*LLPQPE Trigger: TTCTGGCTGAGGCAGCAGCCATTCTAGAACCTGTAG...TCTTAGGTAGCCTCTCTCCTGTGCTGTCCTCCTGAGTCGTGCTGTCAAATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR TCA 90 bp | GGTCAACAATCCAGGCCACAAAGTCTTGTTGCAGGTTCTTCAGGCAAAGAACAGTCTTCCGGCGCCTCTTaGCCTCTGCAGAAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQQSRPQSLVAGSSGKEQSSGAS*PLQKSL Trigger: CAAAGATTTCTGCAGAGGTCAAGAGGCGCCGGAAGA...CTGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR GCA 90 bp | AGAGATTTGACAGCACGACTCAGGAGGACAGCACAGGAGAGAGGCTACCTAAGAGCGCCTCTTGACCTCTaGAGAAATCTTTGTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLTARLRRTAQERGYLRAPLDL*RNLCQV Trigger: AACCTGACAAAGATTTCTGCAGAGGTCAAGAGGCGC...TCTTAGGTAGCCTCTCTCCTGTGCTGTCCTCCTGAGTCGTGCTGTCAAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| 3UTR CAA 72 bp | CTAATTGAGGGGCAAAGTGATGAATCAGAGAGAGATTaGACAGCACGACTCAGGAGGACAGCACAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIEGQSDESERD*TARLRRTAQER Trigger: TCTCTCCTGTGCTGTCCTCCTGAGTCGTGCTGTCAAATCTCTCTCTGATTCATCACTTTGCCCCTCAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCTGTTCCTGAAGTCCATCAGACTTTCCAAGCAGAGCAGTTCAGTCAGATGCTCAGTGTCCTCCTaGGCCAGAAAAGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLFLKSIRLSKQSSSVRCSVSS*ARKVCK Trigger: CTTACAGACTTTTCTGGCTCAGGAGGACACTGAGCA...TCTGACTGAACTGCTCTGCTTGGAAAGTCTGATGGACTTCAGGAACAGAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGCTCAGTGTCCTCCTaGGCCAGAAAAGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPESPYPCNGSTIQATKSCSVSS*ARKVCK Trigger: CTTACAGACTTTTCTGGCTCAGGAGGACACTGAGCA...AGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR GCA 90 bp | CAGTACAGTTCTGTTCCTGAAGTCCATCAGACTTTCCAAGCAGAGCAGTTCAGTATGACCAGCTTATTCTaGAGCGAACACAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QYSSVPEVHQTFQAEQFSMTSLF*SEHSSW Trigger: CCAGCTGCTGTGTTCGCTGCAGAATAAGCTGGTCAT...ACTGAACTGCTCTGCTTGGAAAGTCTGATGGACTTCAGGAACAGAACTGTACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR CCA 90 bp | CTATCTAGCCCTCACAGTCCTTGGCAGGCTAACTCTCACAAGCTAGCACTATTTCGTGATCCATGTATGTaGCCTTCATGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPHSPWQANSHKLALFRDPCM*PSCPST Trigger: AGTGGAAGGACATGAAGGCCACATACATGGATCACG...AAATAGTGCTAGCTTGTGAGAGTTAGCCTGCCAAGGACTGTGAGGGCTAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
||
| CDS-3UTR TCA 90 bp | AATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCTGCTCAGTGTCCTCCTaGGCCAGAAAAGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRFPRKSISMQWVNNPGCSVSS*ARKVCK Trigger: CTTACAGACTTTTCTGGCTCAGGAGGACACTGAGCA...GCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGATGCCAGATTGAATCAGCTTGGAGAATTAGATTGTACAGAGGCAACATCTTCCGGCGCCTCTTaGCCTCTGCAGAAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRDARLNQLGELDCTEATSSGAS*PLQKSL Trigger: CAAAGATTTCTGCAGAGGTCAAGAGGCGCCGGAAGA...TGTTGCCTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCATCTCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR GCA 90 bp | TCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATAGCTTCTCCTGTTCCTaGCCCGCTTGCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNNLRFPRKSISMQWVNNSFSCS*PACCFK Trigger: CTTGAAGCAGCAAGCGGGGCAGGAACAGGAGAAGCT...ATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CCA 90 bp | AATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCCTACAGGTTCTAGAATaGCTGCTGCCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLRFPRKSISMQWVNNPGLQVLE*LLPQPE Trigger: TTCTGGCTGAGGCAGCAGCCATTCTAGAACCTGTAG...GCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| 3UTR CAA 72 bp | CTTCCTTCCCTGCTGTCTTCTCACTCAATGCTCTCGTaGCAGGACAGCTGTACAGTAGGTGGATTTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLSSHSMLS*QDSCTVGGFNF Trigger: AAAGTTAAATCCACCTACTGTACAGCTGTCCTGCAACGAGAGCATTGAGTGAGAAGACAGCAGGGAAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
||
| 3UTR CAA 72 bp | ATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGTaGCAGGTTCTTCAGGCAAAGAACAGGTTTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MQWVNNPGHKVL*QVLQAKNRFAA Trigger: TGCAGCAAACCTGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| 3UTR CAA 72 bp | TCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTaGTTGCAGGTTCTTCAGGCAAAGAACAGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMQWVNNPGHKV*LQVLQAKNRFA Trigger: AGCAAACCTGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTAGCTTCTCCTGTTCCTaGCCCGCTTGCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCFQQSKVSQKVHIHAMGSFSCS*PACCFK Trigger: CTTGAAGCAGCAAGCGGGGCAGGAACAGGAGAAGCT...ACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGAAACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGGTCAAGTGTACCACTTGGACAAATCTCAATTGTACACCTACCATAAGGCGCCTCTTGACCTCTaGAGAAATCTTTGTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSGQVYHLDKSQLYTYHKAPLDL*RNLCQV Trigger: AACCTGACAAAGATTTCTGCAGAGGTCAAGAGGCGC...CTTATGGTAGGTGTACAATTGAGATTTGTCCAAGTGGTACACTTGACCACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGTATATCAGGCCACTTCTCATTCTCAGTAGAAAAGGTGTTCCAGGCCAAAATGACCAGCTTATTCTaGAGCGAACACAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISISGHFSFSVEKVFQAKMTSLF*SEHSSW Trigger: CCAGCTGCTGTGTTCGCTGCAGAATAAGCTGGTCAT...TTTGGCCTGGAACACCTTTTCTACTGAGAATGAGAAGTGGCCTGATATACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTTCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCATGACCAGCTTATTCTaGAGCGAACACAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSNNLRFPRKSISMQWVMTSLF*SEHSSW Trigger: CCAGCTGCTGTGTTCGCTGCAGAATAAGCTGGTCAT...GACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGAAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATTTGCCTTTTGCCGACTaGCATCTTCAGAAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNNLRFPRKSISMQWVNNLPFAD*HLQKPE Trigger: CTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAA...ATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCAAGTTAGACACAGGTGAAGACAGAACAAGCCAGAATATACTGTCAAAGCGTGATCCATGTATGTaGCCTTCATGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSKLDTGEDRTSQNILSKRDPCM*PSCPST Trigger: AGTGGAAGGACATGAAGGCCACATACATGGATCACG...CTTTGACAGTATATTCTGGCTTGTTCTGTCTTCACCTGTGTCTAACTTGCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR GCA 90 bp | TGCCAGATTGAATCAGCTTGGAGAATTAGATTGTACAGAGGCAACAAACTTCCAAGCTCTGCTTCTTCCTaGAAGCCTACAGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQIESAWRIRLYRGNKLPSSASS*KPTGSR Trigger: TCTAGAACCTGTAGGCTTGCAGGAAGAAGCAGAGCT...TGGAAGTTTGTTGCCTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR GCA 90 bp | ATAAGTATATCAGGCCACTTCTCATTCTCAGTAGAAAAGGTGTTCCAGGCCAAAAGCTCTGCTTCTTCCTaGAAGCCTACAGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISISGHFSFSVEKVFQAKSSASS*KPTGSR Trigger: TCTAGAACCTGTAGGCTTGCAGGAAGAAGCAGAGCT...TTTGGCCTGGAACACCTTTTCTACTGAGAATGAGAAGTGGCCTGATATACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGTCAAGCTATAAGTATATCAGGCCACTTCTCATTCTCAGTAGAAAAGGTCTACAGGTTCTAGAATaGCTGCTGCCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSYKYIRPLLILSRKGLQVLE*LLPQPE Trigger: TTCTGGCTGAGGCAGCAGCCATTCTAGAACCTGTAG...ACCTTTTCTACTGAGAATGAGAAGTGGCCTGATATACTTATAGCTTGACAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAACTTTTACACAATACTGAAGAGAGTGAGGTCACAGTCACAAAGGCATTGCCTTTTGCCGACTaGCATCTTCAGAAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLLHNTEESEVTVTKALPFAD*HLQKPE Trigger: CTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAA...TGCCTTTGTGACTGTGACCTCACTCTCTTCAGTATTGTGTAAAAGTTTTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR CCA 90 bp | ATAAGTATATCAGGCCACTTCTCATTCTCAGTAGAAAAGGTGTTCCAGGCCAAACGTGATCCATGTATGTaGCCTTCATGTCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISISGHFSFSVEKVFQAKRDPCM*PSCPST Trigger: AGTGGAAGGACATGAAGGCCACATACATGGATCACG...TTTGGCCTGGAACACCTTTTCTACTGAGAATGAGAAGTGGCCTGATATACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| 3UTR CAA 72 bp | AAGAGATGCCAGATTGAATCAGCTTGGAGAATTAGATaGTACAGAGGCAACAAACTTCCAGGCTTAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRCQIESAWRIR*YRGNKLPGLGL Trigger: TAGGCCTAAGCCTGGAAGTTTGTTGCCTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR GCA 90 bp | CCCATAAATGTTTCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAAAGCTCTGCTTCTTCCTaGAAGCCTACAGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PINVSNNLRFPRKSISMQSSASS*KPTGSR Trigger: TCTAGAACCTGTAGGCTTGCAGGAAGAAGCAGAGCT...TTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGAAACATTTATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| 3UTR CAA 72 bp | ACACAACAGTTCACTGAAAAGCCAAGAGATGCCAGATaGAATCAGCTTGGAGAATTAGATTGTACAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQQFTEKPRDAR*NQLGELDCTEA Trigger: TGCCTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCATCTCTTGGCTTTTCAGTGAACTGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| 3UTR CAA 72 bp | CCTGTTAGCTGGGCTCAGTCCTCACGCTATGGCTTTTaGCTTTATCTTAGTGCAGAATTATTTTCCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PVSWAQSSRYGF*LYLSAELFSFT Trigger: AGTAAAGGAAAATAATTCTGCACTAAGATAAAGCAAAAAGCCATAGCGTGAGGACTGAGCCCAGCTAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
||
| 3UTR CAA 72 bp | CAGAACTGGATCCTACCAGTTCAGAATAAAGAAACTTaGGAATTCCCCCAATATATAGTTCAAACACTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNWILPVQNKET*EFPQYIVQTLN Trigger: GTTAAGTGTTTGAACTATATATTGGGGGAATTCCAAAGTTTCTTTATTCTGAACTGGTAGGATCCAGTTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105431.8 |
||
| CDS TCA 90 bp | TTCTCCTGTTCCTGCCCCGCTTGCTGCTTCAAGGTTTCCAGTTCCTaGTGGGATCCGTCAAGCTTCTCCAGAGCCCTCTTCCGGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCSCPACCFKVSSS*WDPSSFSRALFRRL Trigger: GAGGCGCCGGAAGAGGGCTCTGGAGAAGCTTGACGGATCCCATCAGGAACTGGAAACCTTGAAGCAGCAAGCGGGGCAGGAACAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS TCA 90 bp | GGGCTCGCCCTTTCACATCTTTGTCCTCAGCCTTGCCCTCAGAGATaGCCAGCTTATTCTGCAGCGAACACAGCAGCTGGAGGTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLALSHLCPQPCPQR*PAYSAANTAAGGSS Trigger: AGAGCTACCTCCAGCTGCTGTGTTCGCTGCAGAATAAGCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS GCA 90 bp | GTGGCCTTCATGTCCTTCCACTGCTCCTTAGTTTCAGTTGCCTTTTaGCGACTGGCATCTTCAGAAGCCAGAGCATCAGGGCTCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAFMSFHCSLVSVAF*RLASSEARASGLCS Trigger: TGAGCAGAGCCCTGATGCTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAACTGAAACTAAGGAGCAGTGGAAGGACATGAAGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
||
| CDS GCA 90 bp | CATGTATGTGGCCTTCATGTCCTTCCACTGCTCCTTAGTTTCAGTTaGCTTTTGCCGACTGGCATCTTCAGAAGCCAGAGCATCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVCGLHVLPLLLSFS*LLPTGIFRSQSIRA Trigger: AGCCCTGATGCTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAACTGAAACTAAGGAGCAGTGGAAGGACATGAAGGCCACATACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCAACAATCCAGGCCACAAAGTCTTGTTGCAGGTTCTTCAGGCAAAGAACACGCCCTTTCACATCTTaGTCCTCAGCCTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTIQATKSCCRFFRQRTRPFTS*SSALPS Trigger: TGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCG...TGTTCTTTGCCTGAAGAACCTGCAACAAGACTTTGTGGCCTGGATTGTTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS TCA 90 bp | ACCTGGGGTAAGGCCTCAGACAGGGCACATTTTATGACATCCACGTaGTCCATGTATGTGGCCTTCATGTCCTTCCACTGCTCCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TWGKASDRAHFMTST*SMYVAFMSFHCSLV Trigger: AACTAAGGAGCAGTGGAAGGACATGAAGGCCACATACATGGATCACGTGGATGTCATAAAATGTGCCCTGTCTGAGGCCTTACCCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCTGTTCCTGAAGTCCATCAGACTTTCCAAGCAGAGCAGTTCAGTCAGATCTTTGTCCTCAGCCTaGCCCTCAGAGATGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVLFLKSIRLSKQSSSVRSLSSA*PSEMTS Trigger: GCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGA...TCTGACTGAACTGCTCTGCTTGGAAAGTCTGATGGACTTCAGGAACAGAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTTCTTTGTCCTCAGCCTaGCCCTCAGAGATGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQKVHIHAMGQQSRPQSSLSSA*PSEMTS Trigger: GCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGA...ACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCCACAAAGTCTTGTTGCAACTCCTCCATGATCTaGGCAGGCAGCTCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESPYPCNGSTIQATKSCCNSSMI*AGSSAS Trigger: AGAAGCAGAGCTGCCTGCCAAGATCATGGAGGAGTT...GCAACAAGACTTTGTGGCCTGGATTGTTGACCCATTGCATGGATATGGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CAA 90 bp | AATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCAACAATCCAGGCAACTCCTCCATGATCTaGGCAGGCAGCTCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLRFPRKSISMQWVNNPGNSSMI*AGSSAS Trigger: AGAAGCAGAGCTGCCTGCCAAGATCATGGAGGAGTT...GCCTGGATTGTTGACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGCCAAGAGATGCCAGATTGAATCAGCTTGGAGAATTAGATTGTACAGAGCGCCCTTTCACATCTTaGTCCTCAGCCTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EKPRDARLNQLGELDCTERPFTS*SSALPS Trigger: TGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCG...CTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCATCTCTTGGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS-3UTR CAA 90 bp | AATGTTTCCAACAATCTAAGGTTTCCCAGAAAGTCCATATCCATGCAATGGGTCCGCCCTTTCACATCTTaGTCCTCAGCCTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NVSNNLRFPRKSISMQWVRPFTS*SSALPS Trigger: TGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCG...GACCCATTGCATGGATATGGACTTTCTGGGAAACCTTAGATTGTTGGAAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105431.8 ENSMUST00000160337.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGATTGAATCAGCTTGGAGAATTAGATTGTACAGAGGCAACAAACTTCCAAACTCCTCCATGATCTaGGCAGGCAGCTCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQIESAWRIRLYRGNKLPNSSMI*AGSSAS Trigger: AGAAGCAGAGCTGCCTGCCAAGATCATGGAGGAGTT...TGGAAGTTTGTTGCCTCTGTACAATCTAATTCTCCAAGCTGATTCAATCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020081.11 |
||
| CDS GCA 72 bp | CTTCTCCAGAGCCCTCTTCCGGCGCCTCTTGACCTCTaGAGAAATCTTTGTCAGGTTCTGCAAACGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLQSPLPAPLDL*RNLCQVLQTLL Trigger: CAGAAGCGTTTGCAGAACCTGACAAAGATTTCTGCAGAGGTCAAGAGGCGCCGGAAGAGGGCTCTGGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| CDS CAA 90 bp | TGTGGCCTTCATGTCCTTCCACTGCTCCTTAGTTTCAGTTGCCTTTaGCCGACTGGCATCTTCAGAAGCCAGAGCATCAGGGCTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CGLHVLPLLLSFSCL*PTGIFRSQSIRALL Trigger: GAGCAGAGCCCTGATGCTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAACTGAAACTAAGGAGCAGTGGAAGGACATGAAGGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
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| CDS CAA 90 bp | GATTTGGCTGTAAGGGCTCGCCCTTTCACATCTTTGTCCTCAGCCTaGCCCTCAGAGATGACCAGCTTATTCTGCAGCGAACACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DLAVRARPFTSLSSA*PSEMTSLFCSEHSS Trigger: GCTGCTGTGTTCGCTGCAGAATAAGCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCGAGCCCTTACAGCCAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| CDS CAA 72 bp | GTAAGGGCTCGCCCTTTCACATCTTTGTCCTCAGCCTaGCCCTCAGAGATGACCAGCTTATTCTGCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: VRARPFTSLSSA*PSEMTSLFCSE Trigger: TTCGCTGCAGAATAAGCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCGAGCCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| CDS TCA 72 bp | CTTTCACATCTTTGTCCTCAGCCTTGCCCTCAGAGATaGCCAGCTTATTCTGCAGCGAACACAGCAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSHLCPQPCPQR*PAYSAANTAAG Trigger: TCCAGCTGCTGTGTTCGCTGCAGAATAAGCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGATGTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| CDS GCA 72 bp | ATGTCCTTCCACTGCTCCTTAGTTTCAGTTGCCTTTTaGCGACTGGCATCTTCAGAAGCCAGAGCATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MSFHCSLVSVAF*RLASSEARASG Trigger: CCCTGATGCTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAACTGAAACTAAGGAGCAGTGGAAGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
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| CDS CAA 72 bp | CATGTCCTTCCACTGCTCCTTAGTTTCAGTTGCCTTTaGCCGACTGGCATCTTCAGAAGCCAGAGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: HVLPLLLSFSCL*PTGIFRSQSIR Trigger: CCTGATGCTCTGGCTTCTGAAGATGCCAGTCGGCAAAAGGCAACTGAAACTAAGGAGCAGTGGAAGGACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
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| CDS CAA 72 bp | TTGGATTTGGCTGTAAGGGCTCGCCCTTTCACATCTTaGTCCTCAGCCTTGCCCTCAGAGATGACCAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: LDLAVRARPFTS*SSALPSEMTSL Trigger: TAAGCTGGTCATCTCTGAGGGCAAGGCTGAGGACAAAGATGTGAAAGGGCGAGCCCTTACAGCCAAATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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| CDS TCA 72 bp | AAGGCCTCAGACAGGGCACATTTTATGACATCCACGTaGTCCATGTATGTGGCCTTCATGTCCTTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: KASDRAHFMTST*SMYVAFMSFHC Trigger: GCAGTGGAAGGACATGAAGGCCACATACATGGATCACGTGGATGTCATAAAATGTGCCCTGTCTGAGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
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| CDS CAA 72 bp | AAGTTTCTCCTCAAGGACTCGCTTCTTAGCCTCGAGTaGCTCAAAAGCCTTCTGAAGCTCTGTGTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KFLLKDSLLSLE*LKSLLKLCVLP Trigger: AGGAAGTACACAGAGCTTCAGAAGGCTTTTGAGCAACTCGAGGCTAAGAAGCGAGTCCTTGAGGAGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 ENSMUST00000219352.2 |
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| CDS CAA 72 bp | TGCAGAAATCTTTGTCAGGTTCTGCAAACGCTTCTGTaGCAGTACCCACTGCTTCTGAGCCAGCTGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: CRNLCQVLQTLL*QYPLLLSQLKF Trigger: AAACTTCAGCTGGCTCAGAAGCAGTGGGTACTGCAACAGAAGCGTTTGCAGAACCTGACAAAGATTTCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020081.11 ENSMUST00000105431.8 ENSMUST00000160337.2 |
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