Pregenerated sensors for ZWILCH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032400Ensembl transcript IDs: ENSMUST00000122091.8, ENSMUST00000124301.3, ENSMUST00000130127.8, ENSMUST00000143421.2, ENSMUST00000152824.8, ENSMUST00000176299.8, ENSMUST00000176378.9, ENSMUST00000176794.8, ENSMUST00000177045.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCAGAGATTGTGGTCCCCACAGTCTGCGCCCTCTCCATCCTCACTaGTGCCCTGATGCTGACACTTCTCCTCAGGAGACGTGGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: FRDCGPHSLRPLHPH*CPDADTSPQETWLR Trigger: TCTCAGCCACGTCTCCTGAGGAGAAGTGTCAGCATCAGGGCAGCAGTGAGGATGGAGAGGGCGCAGACTGTGGGGACCACAATCTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CCA 90 bp | GGATGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTaGCTTCAGAGATTGTGGTCCCCACAGTCTGCGCCCTCTCCATCC | + |
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Preference number: 1 (lower is better) Translates to: GCICPFQSPCLGTCT*LQRLWSPQSAPSPS Trigger: GGATGGAGAGGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 90 bp | TCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATaGACGTGGCTTCAGAGATTGTGGTCCCCACAGTCTGCGCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SGGCICPFQSPCLGT*TWLQRLWSPQSAPS Trigger: AGAGGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CCA 90 bp | CATCCTCACTGCTGCCCTGATGCTGACACTTCTCCTCAGGAGACGTaGCTGAGACGGGATCTCCTCTCCACCTTCATCTGTCAAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: HPHCCPDADTSPQET*LRRDLLSTFICQSI Trigger: GATGCTTTGACAGATGAAGGTGGAGAGGAGATCCCGTCTCAGCCACGTCTCCTGAGGAGAAGTGTCAGCATCAGGGCAGCAGTGAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR TCA 90 bp | CTCACTGCTGCCCTGATGCTGACACTTCTCCTCAGGAGACGTGGCTaGGACGGGATCTCCTCTCCACCTTCATCTGTCAAAGCATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LTAALMLTLLLRRRG*DGISSPPSSVKASL Trigger: AAGAGATGCTTTGACAGATGAAGGTGGAGAGGAGATCCCGTCTCAGCCACGTCTCCTGAGGAGAAGTGTCAGCATCAGGGCAGCAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 90 bp | ACACAGCTCACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTTaGTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: TQLTSGGCICPFQSP*LGTCTWLQRLWSPQ Trigger: CTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTGAGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 90 bp | AATAGTGAGCTGCTATGTGGATGCTGCAAACCAAACCGAGTCCTTTaGAAGAGAAGCAGGTGCTCTTCACCACCGAACCACCGAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: NSELLCGCCKPNRVL*KRSRCSSPPNHRAI Trigger: GATGGCTCGGTGGTTCGGTGGTGAAGAGCACCTGCTTCTCTTGCAAAGGACTCGGTTTGGTTTGCAGCATCCACATAGCAGCTCACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| 3UTR TCA 90 bp | ACAGGGGAGCTGTCACTCAGTTGCCACACTGTTTTCACCCTCTTCTaGCTATTGCTGAGCTCCACTCTCCATTTCTGCGGCTTCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: TGELSLSCHTVFTLF*LLLSSTLHFCGFSL Trigger: AAGTGAGAAGCCGCAGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAACAGTGTGGCAACTGAGTGACAGCTCCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR GCA 90 bp | CCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTGTGTACTaGCATGCCCAGTTAAAAATATTTGGACTAAAGCCGAGAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: PGRLCLLSAGIKGVY*HAQLKIFGLKPRES Trigger: GGATTCTCTCGGCTTTAGTCCAAATATTTTTAACTGGGCATGGCAGTACACACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR TCA 90 bp | TGTCACTCAGTTGCCACACTGTTTTCACCCTCTTCTGACTATTGCTaGGCTCCACTCTCCATTTCTGCGGCTTCTCACTTTGATACAAAT | + |
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Preference number: 1 (lower is better) Translates to: CHSVATLFSPSSDYC*APLSISAASHFDTN Trigger: ATTTGTATCAAAGTGAGAAGCCGCAGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAACAGTGTGGCAACTGAGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR CCA 90 bp | CCATTTCTGCGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTaGTCTGACTGGCAACTGAAAAATGTGTTGCTCATCAAGAGGATT | + |
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Preference number: 1 (lower is better) Translates to: PFLRLLTLIQILDSS*SDWQLKNVLLIKRI Trigger: AATCCTCTTGATGAGCAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCAGAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR CCA 90 bp | CGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTGGTCTGACTaGCAACTGAAAAATGTGTTGCTCATCAAGAGGATTTTGTTTATA | + |
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Preference number: 1 (lower is better) Translates to: RLLTLIQILDSSWSD*QLKNVLLIKRILFI Trigger: TATAAACAAAATCCTCTTGATGAGCAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCTCAGGAAACTCAGGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTCAGGCCTGTGGAAACTaGAATGGTCTACAGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CQLRKLRPVETGMVYRGAQACGN*NGLQGS Trigger: GCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTG...AGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTGAGTTTCCTGAGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR CAA 90 bp | AACACAGCTCACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTaGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: NTAHFWWMYLSLSEP*LRHMHVASEIVVPT Trigger: TGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTGAGCTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CAA 90 bp | AGGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTaGCCACACTGTTTTCACCCTCTTCTGACTATTGCTGAGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RPVETGMVYRGAVTQ*PHCFHPLLTIAELH Trigger: GTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAACAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGCTCCATCCTCACTGCTaGCCTGATGCTGACACTTCT | + |
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Preference number: 2 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLLHPHC*PDADTS Trigger: AGAAGTGTCAGCATCAGGGCAGCAGTGAGGATGGAG...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTGGGTCTGACTGGCAACTaGAAAATGTGTTGCTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: ACGNWNGLQGSCHSVATLGLTGN*KMCCSS Trigger: TGATGAGCAACACATTTTTCAGTTGCCAGTCAGACC...CAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTTCTTCTGACTATTGCTaGGCTCCACTCTCCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLWKLEWSTGELSLSCHTSSDYC*APLSIS Trigger: AGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGA...AGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCATTCTTGACAGCAGCTaGTCTGACTGGCAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQACGNWNGLQGSCHSVAILDSS*SDWQLK Trigger: TTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAAT...GGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTGTGCGGCTTCTCACTTTaGTACAAATTCTTGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ACGNWNGLQGSCHSVATLCGFSL*YKFLTA Trigger: TGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCA...CAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTGTATTCTTGACAGCAGCTaGTCTGACTGGCAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PVETGMVYRGAVTQLPHCILDSS*SDWQLK Trigger: TTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAAT...ACAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTTTCCCAAAAGCTGTGTaGATACCAAGTGAACATGAT | + |
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Preference number: 2 (lower is better) Translates to: NLLCRPGRLCLLSAGIKGFPKAV*IPSEHD Trigger: ATCATGTTCACTTGGTATGCACACAGCTTTTGGGAA...ACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCTGTGTAGCTGTGGTTTTTCTGGAACTTGCTCTGTAGACCAGGCCGCCACAGCTCACTTCTGGTaGATGTATCTGTCCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VSLCSCGFSGTCSVDQAATAHFW*MYLSLS Trigger: TGAAAGGGACAGATACATCCACCAGAAGTGAGCTGT...GGCGGCCTGGTCTACAGAGCAAGTTCCAGAAAAACCACAGCTACACAGAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTGTTTAGCAGCTGGTCTGACTaGCAACTGAAAAATGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: CGNWNGLQGSCHSVATLFSSWSD*QLKNVL Trigger: CAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCT...AAACAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTGGTCTGACTGGCAAAGGAACAGCAGTAACTaGCATCAGTTGGCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LRLLTLIQILDSSWSDWQRNSSN*HQLAHC Trigger: ACAGTGAGCCAACTGATGCCAGTTACTGCTGTTCCT...TTGCCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTGGTCTGACTGGGTTTTCACCCTCTTCTaGCTATTGCTGAGCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: FLRLLTLIQILDSSWSDWVFTLF*LLLSST Trigger: AGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAAC...CCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCACCCTCTTCTGACTATTGCTGAGCTCCACTCTCCATTTCTGCGGCTTCTCTTCCTGTGTCGATACTaGGGGAGAAATGAAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: FHPLLTIAELHSPFLRLLFLCRY*GRNEVF Trigger: GAATACTTCATTTCTCCCTCAGTATCGACACAGGAA...GAGAAGCCGCAGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGAGCACATACAGGATAACGCCTGCAATGATGTCATTTGTTGTGATAAGCGGTACCTTCAGGATCTaGACCGTCACATCTCACCCA | + |
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Preference number: 2 (lower is better) Translates to: QVSTYRITPAMMSFVVISGTFRI*TVTSHP Trigger: TGGGTGAGATGTGACGGTTCAGATCCTGAAGGTACC...GCTTATCACAACAAATGACATCATTGCAGGCGTTATCCTGTATGTGCTCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGCGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTGGTCTGACTGGGGAAACTCAGGCCTGTaGAAACTGGAATGGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: FLRLLTLIQILDSSWSDWGNSGL*KLEWST Trigger: TGTAGACCATTCCAGTTTCCACAGGCCTGAGTTTCC...CCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACACTGTTTTCACCCTCTTCTGACTATTGCTGAGCTCCACTCTCCATTTGGTCTGACTGGCAACTaGAAAATGTGTTGCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: LPHCFHPLLTIAELHSPFGLTGN*KMCCSS Trigger: TGATGAGCAACACATTTTTCAGTTGCCAGTCAGACC...AAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAACAGTGTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCTGTGTAGCTGTGGTTTTTCTGGAACTTGCTCTGTAGACCAGGCCGCCCCAGTTAAAAATATTTaGACTAAAGCCGAGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: VSLCSCGFSGTCSVDQAAPVKNI*TKAERI Trigger: GATTCTCTCGGCTTTAGTCCAAATATTTTTAACTGG...GGCGGCCTGGTCTACAGAGCAAGTTCCAGAAAAACCACAGCTACACAGAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CCA 72 bp | CCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTaGTCCCCACAGTCTGCGCCCTCTCCATCCTCACTG | + |
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Preference number: 3 (lower is better) Translates to: PCLGTCTWLQRL*SPQSAPSPSSL Trigger: CAGTGAGGATGGAGAGGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CCA 72 bp | TGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTaGCTTCAGAGATTGTGGTCCCCACAGTCTGCGCCC | + |
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Preference number: 3 (lower is better) Translates to: CPFQSPCLGTCT*LQRLWSPQSAP Trigger: GGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR-3UTR CAA 90 bp | GGAACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGTCCCTTTCAGAGCCCTaGCTTAGGCACATGCACGTG | + |
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Preference number: 3 (lower is better) Translates to: GTCSVDQAASASSVLGLKSLSEP*LRHMHV Trigger: CACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGA...CTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR CCA 72 bp | TGCTGCCCTGATGCTGACACTTCTCCTCAGGAGACGTaGCTGAGACGGGATCTCCTCTCCACCTTCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: CCPDADTSPQET*LRRDLLSTFIC Trigger: ACAGATGAAGGTGGAGAGGAGATCCCGTCTCAGCCACGTCTCCTGAGGAGAAGTGTCAGCATCAGGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR TCA 72 bp | GCCCTGATGCTGACACTTCTCCTCAGGAGACGTGGCTaGGACGGGATCTCCTCTCCACCTTCATCTGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: ALMLTLLLRRRG*DGISSPPSSVK Trigger: TTTGACAGATGAAGGTGGAGAGGAGATCCCGTCTCAGCCACGTCTCCTGAGGAGAAGTGTCAGCATCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR-3UTR CAA 90 bp | CCACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGCGGAGAGAAGACCCTTaGCAAGGGCCCGCAGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: PPSSVKASLQDHSSFLLQRREDP*QGPAVR Trigger: GCGCACTGCGGGCCCTTGCAAAGGGTCTTCTCTCCG...CTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 72 bp | TGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATaGACGTGGCTTCAGAGATTGTGGTCCCCACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: CICPFQSPCLGT*TWLQRLWSPQS Trigger: AGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 72 bp | TTTTTCTGGAACTTGCTCTGTAGACCAGGCCGCCTCTaGCTCCTCAGTGCTGGGATTAAAGGTGTGTACTGC | + |
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Preference number: 3 (lower is better) Translates to: FFWNLLCRPGRL*LLSAGIKGVYC Trigger: GCAGTACACACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTTCCAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR GCA 72 bp | CTGCTATGTGGATGCTGCAAACCAAACCGAGTCCTTTaGAAGAGAAGCAGGTGCTCTTCACCACCGAACCAC | + |
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Preference number: 3 (lower is better) Translates to: LLCGCCKPNRVL*KRSRCSSPPNH Trigger: GTGGTTCGGTGGTGAAGAGCACCTGCTTCTCTTGCAAAGGACTCGGTTTGGTTTGCAGCATCCACATAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| 3UTR TCA 72 bp | CTGTCACTCAGTTGCCACACTGTTTTCACCCTCTTCTaGCTATTGCTGAGCTCCACTCTCCATTTCTGCGGC | + |
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Preference number: 3 (lower is better) Translates to: LSLSCHTVFTLF*LLLSSTLHFCG Trigger: GCCGCAGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAACAGTGTGGCAACTGAGTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR GCA 72 bp | TCCAAAACAGGCAATAGTGAGCTGCTATGTGGATGCTaGAAACCAAACCGAGTCCTTTGCAAGAGAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SKTGNSELLCGC*KPNRVLCKRSR Trigger: CCTGCTTCTCTTGCAAAGGACTCGGTTTGGTTTGCAGCATCCACATAGCAGCTCACTATTGCCTGTTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACTCAACTGAAAAATGTGTaGCTCATCAAGAGGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: GLWKLEWSTGELSLSCHTQLKNV*LIKRIL Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGTTG...AGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTGCCACACAACTGAAAAATGTGTaGCTCATCAAGAGGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: QACGNWNGLQGSCHSVATQLKNV*LIKRIL Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGTTG...TGTGGCAACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
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| 3UTR GCA 72 bp | CTCTGCCTCCTCAGTGCTGGGATTAAAGGTGTGTACTaGCATGCCCAGTTAAAAATATTTGGACTAAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: LCLLSAGIKGVY*HAQLKIFGLKP Trigger: CGGCTTTAGTCCAAATATTTTTAACTGGGCATGGCAGTACACACCTTTAATCCCAGCACTGAGGAGGCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| 3UTR TCA 72 bp | TTTCTGAACACGGCAAACCTGTTCCTGTGTCGATACTaGGGGAGAAATGAAGTATTCCTGTCAGCTGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: FLNTANLFLCRY*GRNEVFLSADV Trigger: AACGTCAGCTGACAGGAATACTTCATTTCTCCCTCAGTATCGACACAGGAACAGGTTTGCCGTGTTCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152824.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTCTCCCAACAGGTAAGGCCAGTGGCCTAATATTTTCACCAGCAGAGAGAGTTCTTCAACTTGACTaGTTTCTTCCTTCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LALPTGKASGLIFSPAERVLQLD*FLPSPK Trigger: TTTTGGAGAAGGAAGAAACAAGTCAAGTTGAAGAAC...TCTCTCTGCTGGTGAAAATATTAGGCCACTGGCCTTACCTGTTGGGAGAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
||
| 3UTR CCA 72 bp | CGGCTTCTCACTTTGATACAAATTCTTGACAGCAGCTaGTCTGACTGGCAACTGAAAAATGTGTTGCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RLLTLIQILDSS*SDWQLKNVLLI Trigger: GATGAGCAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
||
| 3UTR GCA 72 bp | CTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTaGTGCAGAAGTTCACGTGATGTCTATTTTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSKHLFRITLLF*CRSSRDVYFSG Trigger: GCCTGAAAAATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| 3UTR GCA 72 bp | ATCAGCTTTACAAGTGAGCACATACAGGATAACGCCTaGAATGATGTCATTTGTTGTGATAAGCTCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISFTSEHIQDNA*NDVICCDKLSS Trigger: GGAGCTGAGCTTATCACAACAAATGACATCATTGCAGGCGTTATCCTGTATGTGCTCACTTGTAAAGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
||
| 3UTR GCA 72 bp | TCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTaGAGAAGTTCACGTGATGTCTATTTTTCAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SKHLFRITLLFC*RSSRDVYFSGS Trigger: AGAGCCTGAAAAATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| 3UTR TCA 72 bp | TACAAATTCTTGACAGCAGCTGGTCTGACTGGCAACTaGAAAATGTGTTGCTCATCAAGAGGATTTTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YKFLTAAGLTGN*KMCCSSRGFCL Trigger: TAAACAAAATCCTCTTGATGAGCAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAATTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143421.2 ENSMUST00000152824.8 |
||
| 3UTR CAA 72 bp | AGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATaGTGGTCCCCACAGTCTGCGCCCTCTCCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPCLGTCTWLQR*WSPQSAPSPSS Trigger: TGAGGATGGAGAGGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACACAGGCCTGTGGAAACTaGAATGGTCTACAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEPLLRHMHVASEIVVPTQACGN*NGLQGS Trigger: GCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTG...TGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | AACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTATTCAGAGCTGCAGTTaGAGACAGGGGAGGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLCRPGRLCLLSAGIKGIQSCS*RQGRGL Trigger: CAAACCCCTCCCCTGTCTTCAACTGCAGCTCTGAAT...ACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | AACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTCGTGACTGTAGTTTGTaGTGGGGCAACAGTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLLCRPGRLCLLSAGIKGRDCSL*WGNSVI Trigger: GATGACACTGTTGCCCCATCACAAACTACAGTCACG...ACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTGAGGAAGGGCTGTCACTaGCTGCTTAATCTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TCSVDQAASASSVLGLKVRKGCH*LLNLQM Trigger: CATCTGAAGATTAAGCAGCCAGTGACAGCCCTTCCT...CACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| 3UTR CAA 72 bp | GCTGCTATGTGGATGCTGCAAACCAAACCGAGTCCTTaGCAAGAGAAGCAGGTGCTCTTCACCACCGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: AAMWMLQTKPSP*QEKQVLFTTEP Trigger: TGGTTCGGTGGTGAAGAGCACCTGCTTCTCTTGCAAAGGACTCGGTTTGGTTTGCAGCATCCACATAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTCACAGCAGACACGTaGTGTCTTTTCTTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTCSVDQAASASSVLGLKVTADT*CLFLCE Trigger: TTCACACAAGAAAAGACATCACGTGTCTGCTGTGAC...CTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTCAGAGATTGTGGTCCCCACAGTCTGCGCCCTCTCCATCCTCACTGCTTGCGGCTTCTCACTTTaGTACAAATTCTTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VASEIVVPTVCALSILTACGFSL*YKFLTA Trigger: TGCTGTCAAGAATTTGTATCAAAGTGAGAAGCCGCA...AGCAGTGAGGATGGAGAGGGCGCAGACTGTGGGGACCACAATCTCTGAAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGCATGGACCTGACAACTaGAGCTGCGTCATGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLHGPDN*SCVMVH Trigger: GTGAACCATGACGCAGCTGCAGTTGTCAGGTCCATG...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCAGAGCTGTCACTCAGTTaGCACACTGTTTTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSPCLGTCTWLQRLWSPELSLS*HTVFTL Trigger: GAGGGTGAAAACAGTGTGGCAACTGAGTGACAGCTC...TGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACCGAGTCCTTTGCAAGAGAAGCAGGTGCTCTTCACCACCGAACCACCGATTCAGAAGACTTGGTTaGCCTTTGCTGATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRVLCKRSRCSSPPNHRFRRLG*PLLINC Trigger: GCAGTTGATCAGCAAAGGCCAACCAAGTCTTCTGAA...TCGGTGGTTCGGTGGTGAAGAGCACCTGCTTCTCTTGCAAAGGACTCGGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCATTAAAGAGCTCATACTaGGCAAAGCCTCTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSPCLGTCTWLQRLWSPLKSSY*AKPLAV Trigger: GACAGCCAGAGGCTTTGCCCAGTATGAGCTCTTTAA...TGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| 3UTR CAA 72 bp | CACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTaGCTTAGGCACATGCACGTGGCTTCAGAGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFWWMYLSLSEP*LRHMHVASEIV Trigger: CACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCATTGGTTGGCCTTTGCTaGTCAACTGCACTTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FQSPCLGTCTWLQRLWSPLVGLC*STALVH Trigger: ATGTACAAGTGCAGTTGATCAGCAAAGGCCAACCAA...TGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGTATATCACCACGCTaGAGACTCTGCAGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLCISPR*RLCRMS Trigger: ACTCATCCTGCAGAGTCTTCAGCGTGGTGATATACA...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTCTGTGTAGCTGTGGTTTTTCTGGAACTTGCTCTGTAGACCAGGCCGCCGTTTTCACCCTCTTCTaGCTATTGCTGAGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSLCSCGFSGTCSVDQAAVFTLF*LLLSST Trigger: AGTGGAGCTCAGCAATAGTCAGAAGAGGGTGAAAAC...GGCGGCCTGGTCTACAGAGCAAGTTCCAGAAAAACCACAGCTACACAGAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACCTTTGCTGATCAACTaGACTTGTACATCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQSPCLGTCTWLQRLWSPPLLIN*TCTSAS Trigger: TGAGGCTGATGTACAAGTGCAGTTGATCAGCAAAGG...TGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACTGCAGCTGCGTCATaGTTCACTGCCTCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSGGCICPFQSPCLGTCTAAAS*FTASFC Trigger: ACAAAAAGAGGCAGTGAACCATGACGCAGCTGCAGT...GCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGGGAAACTCAGGCCTGTaGAAACTGGAATGGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLGNSGL*KLEWST Trigger: TGTAGACCATTCCAGTTTCCACAGGCCTGAGTTTCC...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | CCATGGTATAGAGCCCAATTAACTGCCTTGCTCTCCCAACAGGTAAGGCCAGTGTTGGTTGGCCTTTGCTaGTCAACTGCACTTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PWYRAQLTALLSQQVRPVLVGLC*STALVH Trigger: ATGTACAAGTGCAGTTGATCAGCAAAGGCCAACCAA...CACTGGCCTTACCTGTTGGGAGAGCAAGGCAGTTAATTGGGCTCTATACCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGCAGTTACACCAGTCCTaGTGCCATCAGCTAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLQLHQS*CHQLKQ Trigger: TTGTTTTAGCTGATGGCATCAGGACTGGTGTAACTG...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCGGTCTGACTGGCAACTaGAAAATGTGTTGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSGGCICPFQSPCLGTCGLTGN*KMCCSS Trigger: TGATGAGCAACACATTTTTCAGTTGCCAGTCAGACC...GCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | CCATGGTATAGAGCCCAATTAACTGCCTTGCTCTCCCAACAGGTAAGGCCAGTGCCTTTGCTGATCAACTaGACTTGTACATCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWYRAQLTALLSQQVRPVPLLIN*TCTSAS Trigger: TGAGGCTGATGTACAAGTGCAGTTGATCAGCAAAGG...CACTGGCCTTACCTGTTGGGAGAGCAAGGCAGTTAATTGGGCTCTATACCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACTGTTACTTCCACTGTaGAACCATGGCTGTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: FQSPCLGTCTWLQRLWSPLLLPL*NHGCIS Trigger: TGATATACAGCCATGGTTGCACAGTGGAAGTAACAG...TGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | GAAACTCAGGCCTGTGGAAACTGGAATGGTCTACAGGGGAGCTGTCACTCAGTTATTTCCAAAAGCATCTaGAGTGGGGTAGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETQACGNWNGLQGSCHSVISKSI*SGVVPE Trigger: CTCTGGAACTACCCCACTGCAGATGCTTTTGGAAAT...AACTGAGTGACAGCTCCCCTGTAGACCATTCCAGTTTCCACAGGCCTGAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152824.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTTCAGAAGACTTGGTTaGCCTTTGCTGATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLFRRLG*PLLINC Trigger: GCAGTTGATCAGCAAAGGCCAACCAAGTCTTCTGAA...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| 3UTR CAA 72 bp | ACTGAGGGAGAAATGAAGTATTCCTGTCAGCTGACGTaGAGGAACAGCAGTAACTGGCATCAGTTGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEGEMKYSCQLT*RNSSNWHQLAH Trigger: GTGAGCCAACTGATGCCAGTTACTGCTGTTCCTCAACGTCAGCTGACAGGAATACTTCATTTCTCCCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152824.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGCAGTTCTTCAACTTaGCTTGTTTCTTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICPFQSPCLGTCTWLQRLCSSST*LVSSFS Trigger: GGAGAAGGAAGAAACAAGTCAAGTTGAAGAACTGCA...CAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCCCTTGCTTAGGCACATGCACGTGGCTTCAGAGATTGTGGTCCCCACATGCGTCATGGTTCACTaGCTCTTTTTGTTTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEPLLRHMHVASEIVVPTCVMVH*LFLFIF Trigger: AAAGATAAACAAAAAGAGGCAGTGAACCATGACGCA...TGTGGGGACCACAATCTCTGAAGCCACGTGCATGTGCCTAAGCAAGGGCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCAACTGGGCAAAGCCTCTaGCTGTCACAGCAGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSKHLFRITLLFCCRSSTGQSL*LSQQTR Trigger: ACGTGTCTGCTGTGACAGCCAGAGGCTTTGCCCAGT...TGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATGGTACCTTCAGGATCTaGACCGTCACATCTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLFRITLLFCCRSSRDVYGTFRI*TVTSHP Trigger: TGGGTGAGATGTGACGGTTCAGATCCTGAAGGTACC...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTTCTGGTGGATGTATCTGTCCCTTTCAGAGCCCTTGCTTAGGCACATGCAGTTTTCAGAAGACTTaGTTGGCCTTTGCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTSGGCICPFQSPCLGTCSFQKT*LAFADQ Trigger: TTGATCAGCAAAGGCCAACCAAGTCTTCTGAAAACT...GCATGTGCCTAAGCAAGGGCTCTGAAAGGGACAGATACATCCACCAGAAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGCTCCTGATTGTACTCTaGTATTCAGAGCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVKASLQDHSSFLLQLLIVL*YSELQL Trigger: CAACTGCAGCTCTGAATATCAGAGTACAATCAGGAG...CTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATTCCACTGTGCAACCATaGCTGTATATCACCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLFRITLLFCCRSSRDVYSTVQP*LYITTL Trigger: CAGCGTGGTGATATACAGCCATGGTTGCACAGTGGA...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGTACTTGAAGTGCACCTaGCTGCAGGTAAGCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVKASLQDHSSFLLQYLKCT*LQVSML Trigger: TAACATGCTTACCTGCAGCCAGGTGCACTTCAAGTA...CTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGTCATTTGTTGTGATAAGCTCAGCTCCTAGCCAACAGGTACCTTCAGGACCTTTGCTGATCAACTaGACTTGTACATCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSFVVISSAPSQQVPSGPLLIN*TCTSAS Trigger: TGAGGCTGATGTACAAGTGCAGTTGATCAGCAAAGG...TCCTGAAGGTACCTGTTGGCTAGGAGCTGAGCTTATCACAACAAATGACATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
||
| CDS-3UTR GCA 90 bp | CCACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGGATAGGAAACCACACTaGTGCTCATTCTACACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVKASLQDHSSFLLQDRKPH*CSFYTK Trigger: TTTGGTGTAGAATGAGCAGCAGTGTGGTTTCCTATC...CTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR GCA 90 bp | GAAACGCAGTGGCCCATCTCCTTTAGCTTTTGTTTCAAAACACAGCTCACTTCTATTTCCAAAAGCATCTaGAGTGGGGTAGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETQWPISFSFCFKTQLTSISKSI*SGVVPE Trigger: CTCTGGAACTACCCCACTGCAGATGCTTTTGGAAAT...AGAAGTGAGCTGTGTTTTGAAACAAAAGCTAAAGGAGATGGGCCACTGCGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR TCA 90 bp | GAAACGCAGTGGCCCATCTCCTTTAGCTTTTGTTTCAAAACACAGCTCACTTCTTTCCTGTGTCGATACTaGGGGAGAAATGAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ETQWPISFSFCFKTQLTSFLCRY*GRNEVF Trigger: GAATACTTCATTTCTCCCTCAGTATCGACACAGGAA...AGAAGTGAGCTGTGTTTTGAAACAAAAGCTAAAGGAGATGGGCCACTGCGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGCCTCATAGATGAATaGGTCTTTAGAGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLHLSKHLFRITLLFCCRSLIDE*VFRGSF Trigger: AAAGGAGCCTCTAAAGACCCATTCATCTATGAGGCT...TCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTTCCTTCTCCAAAACAGGCAATAGTGAGCTGCTATGTGGATGCTGCAAGCCTCATAGATGAATaGGTCTTTAGAGGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LFLPSPKQAIVSCYVDAASLIDE*VFRGSF Trigger: AAAGGAGCCTCTAAAGACCCATTCATCTATGAGGCT...TGCAGCATCCACATAGCAGCTCACTATTGCCTGTTTTGGAGAAGGAAGAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| CDS-3UTR CCA 90 bp | AGGATAACGCCTGCAATGATGTCATTTGTTGTGATAAGCTCAGCTCCTAGCCAAAGCCTCATAGATGAATaGGTCTTTAGAGGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RITPAMMSFVVISSAPSQSLIDE*VFRGSF Trigger: AAAGGAGCCTCTAAAGACCCATTCATCTATGAGGCT...TTGGCTAGGAGCTGAGCTTATCACAACAAATGACATCATTGCAGGCGTTATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
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| CDS-3UTR CCA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATAGCAGCTGGTCTGACTaGCAACTGAAAAATGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFRITLLFCCRSSRDVYSSWSD*QLKNVL Trigger: CAACACATTTTTCAGTTGCCAGTCAGACCAGCTGCT...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CCA 90 bp | CTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTATTCTTGACAGCAGCTaGTCTGACTGGCAACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LHLSKHLFRITLLFCCRSILDSS*SDWQLK Trigger: TTTCAGTTGCCAGTCAGACCAGCTGCTGTCAAGAAT...ACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTGAGCACATACAGGATAACGCCTGCAATGATGTCATTTGTTGTGATAAGTTGGTTGGCCTTTGCTaGTCAACTGCACTTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: TSEHIQDNACNDVICCDKLVGLC*STALVH Trigger: ATGTACAAGTGCAGTTGATCAGCAAAGGCCAACCAA...CTTATCACAACAAATGACATCATTGCAGGCGTTATCCTGTATGTGCTCACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGTGTGTACTGCCATGCCCAGTTAAAAATATTTGGACTAAAGTCTTCTGACTATTGCTaGGCTCCACTCTCCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: AGIKGVYCHAQLKIFGLKSSDYC*APLSIS Trigger: AGAAATGGAGAGTGGAGCTCAGCAATAGTCAGAAGA...CTTTAGTCCAAATATTTTTAACTGGGCATGGCAGTACACACCTTTAATCCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR TCA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATAAGAGAAGCTCATGCTaGGGTTTAATGAAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLFRITLLFCCRSSRDVYKRSSC*GLMKSM Trigger: CATGCTTTTCATTAAACCTCAGCATGAGCTTCTCTT...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR TCA 90 bp | ATTGCTGAGCTCCACTCTCCATTTCTGCGGCTTCTCACTTTGATACAAATTCTTAAGAGAAGCTCATGCTaGGGTTTAATGAAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IAELHSPFLRLLTLIQILKRSSC*GLMKSM Trigger: CATGCTTTTCATTAAACCTCAGCATGAGCTTCTCTT...AAGAATTTGTATCAAAGTGAGAAGCCGCAGAAATGGAGAGTGGAGCTCAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143421.2 |
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| CDS-3UTR GCA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATATACAGGATAACGCCTaGAATGATGTCATTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLFRITLLFCCRSSRDVYIQDNA*NDVICC Trigger: ACAACAAATGACATCATTGCAGGCGTTATCCTGTAT...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTGAGCACATACAGGATAACGCCTGCAATGATGTCATTTGTTGTGATAAGAGTTTTCAGAAGACTTaGTTGGCCTTTGCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSEHIQDNACNDVICCDKSFQKT*LAFADQ Trigger: TTGATCAGCAAAGGCCAACCAAGTCTTCTGAAAACT...CTTATCACAACAAATGACATCATTGCAGGCGTTATCCTGTATGTGCTCACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
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| CDS-3UTR CCA 90 bp | AGAAATAGCAGTTTCTTCAGACTGCAGTTCTTCAACTTGACTTGTTTCTTCCTTAGTTTTCAGAAGACTTaGTTGGCCTTTGCTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: RNSSFFRLQFFNLTCFFLSFQKT*LAFADQ Trigger: TTGATCAGCAAAGGCCAACCAAGTCTTCTGAAAACT...AAGGAAGAAACAAGTCAAGTTGAAGAACTGCAGTCTGAAGAAACTGCTATTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| CDS CCA 90 bp | TGTACTCTGATATTCAGAGCTGCAGTTGAAGACAGGGGAGGGGTTTaGAGCATCTCATCCACAGGGCTCCAGGAAAGGTCCAGCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: CTLIFRAAVEDRGGV*SISSTGLQERSSVT Trigger: AGTCACGCTGGACCTTTCCTGGAGCCCTGTGGATGAGATGCTCCAAACCCCTCCCCTGTCTTCAACTGCAGCTCTGAATATCAGAGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122091.8 ENSMUST00000176299.8 ENSMUST00000177045.8 |
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| CDS TCA 90 bp | CTCATCCACAGGGCTCCAGGAAAGGTCCAGCGTGACTGTAGTTTGTaGTGGGGCAACAGTGTCATCCAAGTCGTCAGACTTAAAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LIHRAPGKVQRDCSL*WGNSVIQVVRLKEL Trigger: GAGCTCTTTAAGTCTGACGACTTGGATGACACTGTTGCCCCATCACAAACTACAGTCACGCTGGACCTTTCCTGGAGCCCTGTGGATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000122091.8 ENSMUST00000176299.8 ENSMUST00000176794.8 ENSMUST00000177045.8 |
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| CDS-3UTR CAA 90 bp | AACTTGCTCTGTAGACCAGGCCGCCTCTGCCTCCTCAGTGCTGGGATTAAAGGTAGACTTGGTTGGCCTTaGCTGATCAACTGCACTTGT | + |
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Preference number: 5 (lower is better) Translates to: NLLCRPGRLCLLSAGIKGRLGWP*LINCTC Trigger: ACAAGTGCAGTTGATCAGCAAAGGCCAACCAAGTCT...ACCTTTAATCCCAGCACTGAGGAGGCAGAGGCGGCCTGGTCTACAGAGCAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CAA 90 bp | CTTGCTCTCCCAACAGGTAAGGCCAGTGGCCTAATATTTTCACCAGCAGAGAGAGCTGATCAACTGCACTaGTACATCAGCCTCATAGAT | + |
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Preference number: 5 (lower is better) Translates to: LALPTGKASGLIFSPAERADQLH*YISLID Trigger: ATCTATGAGGCTGATGTACAAGTGCAGTTGATCAGC...TCTCTCTGCTGGTGAAAATATTAGGCCACTGGCCTTACCTGTTGGGAGAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| CDS-3UTR CAA 90 bp | CACCTTCATCTGTCAAAGCATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGATATTCAGAGCTGCAGTaGAAGACAGGGGAGGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: HLHLSKHLFRITLLFCCRYSELQ*KTGEGF Trigger: AAACCCCTCCCCTGTCTTCAACTGCAGCTCTGAATA...TCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATGCTTTGACAGATGAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS CCA 90 bp | ATCTTTCTTCAGTTTGTCCAAACCAATTTCCAAAAGCATCTGCAGTaGGGTAGTTCCAGAGAGAGGGACACTGTCCATAGCTCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: IFLQFVQTNFQKHLQ*GSSRERDTVHSSMV Trigger: TACCATGGAGCTATGGACAGTGTCCCTCTCTCTGGAACTACCCCACTGCAGATGCTTTTGGAAATTGGTTTGGACAAACTGAAGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000122091.8 ENSMUST00000152824.8 ENSMUST00000176299.8 ENSMUST00000176794.8 |
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| CDS-3UTR CAA 90 bp | ACAGGTAAGGCCAGTGGCCTAATATTTTCACCAGCAGAGAGATCAGAAATAGCAAGACTTGGTTGGCCTTaGCTGATCAACTGCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGKASGLIFSPAERSEIARLGWP*LINCTC Trigger: ACAAGTGCAGTTGATCAGCAAAGGCCAACCAAGTCT...TGCTATTTCTGATCTCTCTGCTGGTGAAAATATTAGGCCACTGGCCTTACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124301.3 |
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| CDS-3UTR CAA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATGCTGATCAACTGCACTaGTACATCAGCCTCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLFRITLLFCCRSSRDVYADQLH*YISLID Trigger: ATCTATGAGGCTGATGTACAAGTGCAGTTGATCAGC...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CAA 90 bp | CATCTCTTCAGGATCACTCTTCTTTTCTGCTGCAGAAGTTCACGTGATGTCTATACACTTCACCAAGTCTaGATAGGAAACCACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: HLFRITLLFCCRSSRDVYTLHQV*IGNHTA Trigger: AGCAGTGTGGTTTCCTATCAAGACTTGGTGAAGTGT...ATAGACATCACGTGAACTTCTGCAGCAGAAAAGAAGAGTGATCCTGAAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CAA 90 bp | GAAACGCAGTGGCCCATCTCCTTTAGCTTTTGTTTCAAAACACAGCTCACTTCTGTTCTTCAACTTGACTaGTTTCTTCCTTCTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: ETQWPISFSFCFKTQLTSVLQLD*FLPSPK Trigger: TTTTGGAGAAGGAAGAAACAAGTCAAGTTGAAGAAC...AGAAGTGAGCTGTGTTTTGAAACAAAAGCTAAAGGAGATGGGCCACTGCGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS-3UTR CAA 90 bp | ATCTTCAGAGTAATTTTTATCAGCTTTACAAGTGAGCACATACAGGATAACGCCGCTGATCAACTGCACTaGTACATCAGCCTCATAGAT | + |
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Preference number: 5 (lower is better) Translates to: IFRVIFISFTSEHIQDNAADQLH*YISLID Trigger: ATCTATGAGGCTGATGTACAAGTGCAGTTGATCAGC...GGCGTTATCCTGTATGTGCTCACTTGTAAAGCTGATAAAAATTACTCTGAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176378.9 |
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| CDS-3UTR CAA 90 bp | GTGTACTGCCATGCCCAGTTAAAAATATTTGGACTAAAGCCGAGAGAATCCATGCAACTGAAAAATGTGTaGCTCATCAAGAGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: VYCHAQLKIFGLKPRESMQLKNV*LIKRIL Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGTTG...CATGGATTCTCTCGGCTTTAGTCCAAATATTTTTAACTGGGCATGGCAGTACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122091.8 |
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| CDS TCA 72 bp | AGGGCTCCAGGAAAGGTCCAGCGTGACTGTAGTTTGTaGTGGGGCAACAGTGTCATCCAAGTCGTCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RAPGKVQRDCSL*WGNSVIQVVRL Trigger: AAGTCTGACGACTTGGATGACACTGTTGCCCCATCACAAACTACAGTCACGCTGGACCTTTCCTGGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000122091.8 ENSMUST00000176299.8 ENSMUST00000176794.8 ENSMUST00000177045.8 |
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| CDS TCA 72 bp | CTTCCACTGTGCAACCATGGCTGTATATCACCACGCTaGAGACTCTGCAGGATGAGTGTGAAACACTTCACC | + |
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Preference number: 6 (lower is better) Translates to: LPLCNHGCISPR*RLCRMSVKHFT Trigger: GGTGAAGTGTTTCACACTCATCCTGCAGAGTCTTCAGCGTGGTGATATACAGCCATGGTTGCACAGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122091.8 ENSMUST00000176299.8 ENSMUST00000176794.8 |
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| CDS TCA 72 bp | TTTCCAGAGGCTCAAGCCATTCAGTTACACCAGTCCTaGTGCCATCAGCTAAAACCAGAGCTGCAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPEAQAIQLHQS*CHQLKPELQLK Trigger: CTTCAACTGCAGCTCTGGTTTTAGCTGATGGCATCAGGACTGGTGTAACTGAATGGCTTGAGCCTCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176794.8 |
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| CDS CCA 72 bp | CAGTTTGTCCAAACCAATTTCCAAAAGCATCTGCAGTaGGGTAGTTCCAGAGAGAGGGACACTGTCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: QFVQTNFQKHLQ*GSSRERDTVHS Trigger: GCTATGGACAGTGTCCCTCTCTCTGGAACTACCCCACTGCAGATGCTTTTGGAAATTGGTTTGGACAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000122091.8 ENSMUST00000152824.8 ENSMUST00000176299.8 ENSMUST00000176794.8 |
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| CDS GCA 72 bp | TTCTTCAGTTTGTCCAAACCAATTTCCAAAAGCATCTaGAGTGGGGTAGTTCCAGAGAGAGGGACACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FFSLSKPISKSI*SGVVPERGTLS Trigger: GGACAGTGTCCCTCTCTCTGGAACTACCCCACTGCAGATGCTTTTGGAAATTGGTTTGGACAAACTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000122091.8 ENSMUST00000152824.8 ENSMUST00000176299.8 ENSMUST00000176794.8 |
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| CDS CCA 72 bp | GTCACATCTCACCCAAAGAGGAGGAAGGGCTGTCACTaGCTGCTTAATCTTCAGATGAGTCATATTAGGATT | + |
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Preference number: 6 (lower is better) Translates to: VTSHPKRRKGCH*LLNLQMSHIRI Trigger: AATCCTAATATGACTCATCTGAAGATTAAGCAGCCAGTGACAGCCCTTCCTCCTCTTTGGGTGAGATGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000122091.8 ENSMUST00000130127.8 ENSMUST00000176299.8 ENSMUST00000176794.8 ENSMUST00000177045.8 |
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| CDS CAA 72 bp | CAGAAGACTTGGTTGGCCTTTGCTGATCAACTGCACTaGTACATCAGCCTCATAGATGAATGGGTCTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: QKTWLAFADQLH*YISLIDEWVFR Trigger: TCTAAAGACCCATTCATCTATGAGGCTGATGTACAAGTGCAGTTGATCAGCAAAGGCCAACCAAGTCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000122091.8 ENSMUST00000124301.3 ENSMUST00000130127.8 ENSMUST00000176378.9 ENSMUST00000176794.8 ENSMUST00000177045.8 |
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| CDS GCA 72 bp | AACACTTCACCAAGTCTTGATAGGAAACCACACTGCTaGTCATTCTACACCAAAGCTGTTCAGCAAAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: NTSPSLDRKPHC*SFYTKAVQQNR Trigger: TCGATTTTGCTGAACAGCTTTGGTGTAGAATGAGCAGCAGTGTGGTTTCCTATCAAGACTTGGTGAAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122091.8 ENSMUST00000176299.8 ENSMUST00000176794.8 |
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| CDS CAA 90 bp | AATAGTTTTCAGAAGACTTGGTTGGCCTTTGCTGATCAACTGCACTaGTACATCAGCCTCATAGATGAATGGGTCTTTAGAGGCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSFQKTWLAFADQLH*YISLIDEWVFRGSF Trigger: AAAGGAGCCTCTAAAGACCCATTCATCTATGAGGCTGATGTACAAGTGCAGTTGATCAGCAAAGGCCAACCAAGTCTTCTGAAAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000122091.8 ENSMUST00000124301.3 ENSMUST00000130127.8 ENSMUST00000176378.9 ENSMUST00000176794.8 ENSMUST00000177045.8 |
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