Pregenerated sensors for ZW10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032264Ensembl transcript IDs: ENSMUST00000034803.10, ENSMUST00000213787.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGTCCCCATGGCCTTGCAGTATATGTTCACTGGCAGGACATCCTaGCACACGATCCCAAGTCTCCTTAGCTGGTGCAGCACCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KVPMALQYMFTGRTS*HTIPSLLSWCSTCL Trigger: GAGGCAGGTGCTGCACCAGCTAAGGAGACTTGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 90 bp | CGATCCCAAGTCTCCTTAGCTGGTGCAGCACCTGCCTCACTGCCTTaGTCGCTGCAGAGTAATTCTCTTCGTCGTCCATGTTCGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: RSQVSLAGAAPASLP*SLQSNSLRRPCSQS Trigger: GCTTTGCGAACATGGACGACGAAGAGAATTACTCTGCAGCGAGCAAGGCAGTGAGGCAGGTGCTGCACCAGCTAAGGAGACTTGGGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CCA 90 bp | TCCTGCTCATCATCTCAGCAATCGCTGTGTTCAGCAAGGTCCCCATaGCCTTGCAGTATATGTTCACTGGCAGGACATCCTGCCACACGA | + |
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Preference number: 1 (lower is better) Translates to: SCSSSQQSLCSARSP*PCSICSLAGHPATR Trigger: TCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTTGCTGAACACAGCGATTGCTGAGATGATGAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 90 bp | CAAGCTGGCTTCAACTTCACACTCCTGCCTCAGCCTTCCAAGTGCTaGGTCATGAACATGAACCAGCACGCCCAACTAGCATCTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: QAGFNFTLLPQPSKC*VMNMNQHAQLASAF Trigger: AAAAGCAGATGCTAGTTGGGCGTGCTGGTTCATGTTCATGACGCAGCACTTGGAAGGCTGAGGCAGGAGTGTGAAGTTGAAGCCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 90 bp | TCATCATCTCAGCAATCGCTGTGTTCAGCAAGGTCCCCATGGCCTTaGAGTATATGTTCACTGGCAGGACATCCTGCCACACGATCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SSSQQSLCSARSPWP*SICSLAGHPATRSQ Trigger: TTGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTTGCTGAACACAGCGATTGCTGAGATGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 90 bp | CTGCTCTTCTTTCTGTGTTCTGGAACAAGGCACGGATTAAAGCTTTaGCTTCGCTGGAAGGGAATGCAGTTGCCAGGGGCCCTTTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LLFFLCSGTRHGLKL*LRWKGMQLPGALFH Trigger: ATGGAAAAGGGCCCCTGGCAACTGCATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAAGAAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CCA 90 bp | GCACTTGACAATCTCTCCAGAAGTTCTCCTTTCTGTGCCTGCATTTaGGCCAAAAAGCACTCCGTCCCAAGTCTTCTGAAGCCAGGTACA | + |
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Preference number: 1 (lower is better) Translates to: ALDNLSRSSPFCACI*AKKHSVPSLLKPGT Trigger: TGTACCTGGCTTCAGAAGACTTGGGACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAAAGGAGAACTTCTGGAGAGATTGTCAAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 90 bp | CTTCTAGCACTTGACAATCTCTCCAGAAGTTCTCCTTTCTGTGCCTaGATTTGGGCCAAAAAGCACTCCGTCCCAAGTCTTCTGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LLALDNLSRSSPFCA*IWAKKHSVPSLLKP Trigger: TGGCTTCAGAAGACTTGGGACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAAAGGAGAACTTCTGGAGAGATTGTCAAGTGCTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 90 bp | AGAGTAATTCTCTTCGTCGTCCATGTTCGCAAAGCTTCTAGCACTTaGCAATCTCTCCAGAAGTTCTCCTTTCTGTGCCTGCATTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RVILFVVHVRKASST*QSLQKFSFLCLHLG Trigger: GCCCAAATGCAGGCACAGAAAGGAGAACTTCTGGAGAGATTGTCAAGTGCTAGAAGCTTTGCGAACATGGACGACGAAGAGAATTACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 90 bp | AATACAATCTATCACCATCTTCAGTCGAGATGTCCTCTAGAGCAGTaGTCCTGCTCATCATCTCAGCAATCGCTGTGTTCAGCAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: NTIYHHLQSRCPLEQ*SCSSSQQSLCSARS Trigger: GGACCTTGCTGAACACAGCGATTGCTGAGATGATGAGCAGGATCACTGCTCTAGAGGACATCTCGACTGAAGATGGTGATAGATTGTATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 90 bp | CAGACAGAGGTGCAAACACTTGTGGACCTTCATCCATCACTGTTTTaGACAGGGAATACAATCTATCACCATCTTCAGTCGAGATGTCCT | + |
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Preference number: 1 (lower is better) Translates to: QTEVQTLVDLHPSLF*TGNTIYHHLQSRCP Trigger: AGGACATCTCGACTGAAGATGGTGATAGATTGTATTCCCTGTGCAAAACAGTGATGGATGAAGGTCCACAAGTGTTTGCACCTCTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 90 bp | ACCTTCGTCCAGGCAAGGATGTCCTTATGTGAAGTTACGCTTCCATaGTATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TFVQARMSLCEVTLP*YTGSPKPTSNSERF Trigger: AAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCACATAAGGACATCCTTGCCTGGACGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| 3UTR TCA 90 bp | ATGTCCAGTTCAGAAAACCTTCGTCCAGGCAAGGATGTCCTTATGTaGAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAAG | + |
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Preference number: 1 (lower is better) Translates to: MSSSENLRPGKDVLM*SYASMIYWLTKTNK Trigger: CTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCACATAAGGACATCCTTGCCTGGACGAAGGTTTTCTGAACTGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| 3UTR CCA 90 bp | AAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGAGGGCCTaGGAACAAATCACACTGCGGAGCAGACTCATACTTGACAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: KPGSKIIMYTTLKRA*EQITLRSRLILDKG Trigger: TCCCTTGTCAAGTATGAGTCTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| 3UTR CCA 90 bp | AGCTATTTAATCTTAGCAAGGGCAGCTGCTCTTCTTTCTGTGTTCTaGAACAAGGCACGGATTAAAGCTTTGACTTCGCTGGAAGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: SYLILARAAALLSVF*NKARIKALTSLEGN Trigger: ATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAAGAAGAGCAGCTGCCCTTGCTAAGATTAAATAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCGCTGGAAGGGAATGCAGTTGCCAGGGGCCCTTTTCCATCTGCCCACCGAAGTCTCCTTAGCTGGTaGAGCACCTGCCTCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: TSLEGNAVARGPFPSAHRSLLSW*STCLTA Trigger: GGCAGTGAGGCAGGTGCTGCACCAGCTAAGGAGACT...TCGGTGGGCAGATGGAAAAGGGCCCCTGGCAACTGCATTCCCTTCCAGCGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CAA 90 bp | CTCATCATCTCAGCAATCGCTGTGTTCAGCAAGGTCCCCATGGCCTaGCAGTATATGTTCACTGGCAGGACATCCTGCCACACGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LIISAIAVFSKVPMA*QYMFTGRTSCHTIP Trigger: TGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTTGCTGAACACAGCGATTGCTGAGATGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATGGCCTTGCAGTATATGTTCACTGGCAGGACATCCTGCCACACGATCCCATCAACTTCACACTCCTaGCTCAGCCTTCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PMALQYMFTGRTSCHTIPSTSHS*LSLPSA Trigger: AGCACTTGGAAGGCTGAGGCAGGAGTGTGAAGTTGA...TGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAATGCAGTTGCCAGGGGCCCTTTTCCATCTGCCCACCGATCTCCAATTTCGCAGTATATGTTCACTaGCAGGACATCCTGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: RECSCQGPFSICPPISNFAVYVH*QDILPH Trigger: GTGTGGCAGGATGTCCTGCCAGTGAACATATACTGC...GAAATTGGAGATCGGTGGGCAGATGGAAAAGGGCCCCTGGCAACTGCATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CAA 90 bp | GCTGCTCTTCTTTCTGTGTTCTGGAACAAGGCACGGATTAAAGCTTaGACTTCGCTGGAAGGGAATGCAGTTGCCAGGGGCCCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: AALLSVFWNKARIKA*TSLEGNAVARGPFP Trigger: TGGAAAAGGGCCCCTGGCAACTGCATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAAGAAGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CAA 90 bp | GGGACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATaGATCATCGTAATGTCCAGTTCAGAAAACCTTCGTCCAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GTAATVNEPTSALRK*IIVMSSSENLRPGK Trigger: CTTGCCTGGACGAAGGTTTTCTGAACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGTTTTCATCAGACAGAGGTGCAAACACTTGTGGACCTTCATCCATCACACTGGCAGGACATCCTaGCACACGATCCCAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VFVFIRQRCKHLWTFIHHTGRTS*HTIPSL Trigger: GAGACTTGGGATCGTGTGGCAGGATGTCCTGCCAGT...GTGATGGATGAAGGTCCACAAGTGTTTGCACCTCTGTCTGATGAAAACAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGAGGGTCAGCAAGTGGTGAGCAATATACATGCAGTTGTTGTGGTGAATGGCCTCCTTGTGGTATGTTaGTACCACATCATGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: TEGQQVVSNIHAVVVVNGLLVVC*YHIMEQ Trigger: TTGTTCCATGATGTGGTACCAACATACCACAAGGAG...GCCATTCACCACAACAACTGCATGTATATTGCTCACCACTTGCTGACCCTCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CAA 90 bp | TCAGACAGAGGTGCAAACACTTGTGGACCTTCATCCATCACTGTTTaGCACAGGGAATACAATCTATCACCATCTTCAGTCGAGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: SDRGANTCGPSSITV*HREYNLSPSSVEMS Trigger: GGACATCTCGACTGAAGATGGTGATAGATTGTATTCCCTGTGCAAAACAGTGATGGATGAAGGTCCACAAGTGTTTGCACCTCTGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR GCA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGCGCCCAACTAGCATCTaGTTTTATGCCTGTGTTACT | + |
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Preference number: 2 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQRPTSI*FYACVT Trigger: AGTAACACAGGCATAAAAGCAGATGCTAGTTGGGCG...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTGTTTTCATCAGACAGAGGTGCAAACACTTGTGGACCTTCATCCATCACTTCTGTGCCTGCATTTaGGCCAAAAAGCACTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: VFVFIRQRCKHLWTFIHHFCACI*AKKHSV Trigger: GACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAA...GTGATGGATGAAGGTCCACAAGTGTTTGCACCTCTGTCTGATGAAAACAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGGCCAAAAAGCACTCCGTCCCAAGTCTTCTGAAGCCAGGTACAAGATCCGTTGGTACCACATCATaGAACAAATGGAAGATATTC | + |
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Preference number: 2 (lower is better) Translates to: IWAKKHSVPSLLKPGTRSVGTTS*NKWKIF Trigger: GAATATCTTCCATTTGTTCCATGATGTGGTACCAAC...GGATCTTGTACCTGGCTTCAGAAGACTTGGGACGGAGTGCTTTTTGGCCCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTGAAAGGCATCCATTTGGACACATAGACGGGAACCTCTTCTTGGTATTTCAAGATCCACAAAGGTaGTCGTGCCATCGCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FFERHPFGHIDGNLFLVFQDPQR*SCHRKG Trigger: TCCTTTGCGATGGCACGACCACCTTTGTGGATCTTG...AAATACCAAGAAGAGGTTCCCGTCTATGTGTCCAAATGGATGCCTTTCAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGAAAGGCATCCATTTGGACACATAGACGGGAACCTCTTCTTGGTATTTAGGGTCAGCAAGTGGTaGGCAATATACATGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: FFERHPFGHIDGNLFLVFRVSKW*AIYMQL Trigger: CAACTGCATGTATATTGCTCACCACTTGCTGACCCT...AAATACCAAGAAGAGGTTCCCGTCTATGTGTCCAAATGGATGCCTTTCAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGACATCATGGAACAAATaGAAGATATTCCTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQTSWNK*KIFLTE Trigger: CTCAGTGAGGAATATCTTCCATTTGTTCCATGATGT...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGCTTTGTAGGCCAAGCTaGCTTCAACTTCACACTCCT | + |
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Preference number: 2 (lower is better) Translates to: TLECPKPGSKIIMYTTLKLCRPS*LQLHTP Trigger: AGGAGTGTGAAGTTGAAGCCAGCTTGGCCTACAAAG...CTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CCA 72 bp | AGGACATCCTGCCACACGATCCCAAGTCTCCTTAGCTaGTGCAGCACCTGCCTCACTGCCTTGCTCGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RTSCHTIPSLLS*CSTCLTALLAA Trigger: TGCAGCGAGCAAGGCAGTGAGGCAGGTGCTGCACCAGCTAAGGAGACTTGGGATCGTGTGGCAGGATGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 72 bp | TCGTGCCATCGCAAAGGATGGGGGCGAGCCGCAATCTaGACTGATGACCGAGGGTCAGCAAGTGGTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SCHRKGWGRAAI*TDDRGSASGEQ Trigger: TTGCTCACCACTTGCTGACCCTCGGTCATCAGTTCAGATTGCGGCTCGCCCCCATCCTTTGCGATGGCACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | GTCTCCTTAGCTGGTGCAGCACCTGCCTCACTGCCTTaGTCGCTGCAGAGTAATTCTCTTCGTCGTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: VSLAGAAPASLP*SLQSNSLRRPC Trigger: ACATGGACGACGAAGAGAATTACTCTGCAGCGAGCAAGGCAGTGAGGCAGGTGCTGCACCAGCTAAGGAGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CCA 72 bp | CAGCAAGGTCCCCATGGCCTTGCAGTATATGTTCACTaGCAGGACATCCTGCCACACGATCCCAAGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QQGPHGLAVYVH*QDILPHDPKSP Trigger: AGGAGACTTGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAATGCAGTTGCCAGGGGCCCTTTTCCATCTGCCCACCGATCTCCAATTTCAAGGTCCCCATGGCCTaGCAGTATATGTTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: RECSCQGPFSICPPISNFKVPMA*QYMFTG Trigger: GCCAGTGAACATATACTGCAAGGCCATGGGGACCTT...GAAATTGGAGATCGGTGGGCAGATGGAAAAGGGCCCCTGGCAACTGCATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | GGCTTCAACTTCACACTCCTGCCTCAGCCTTCCAAGTaGTGCGTCATGAACATGAACCAGCACGCCCAACTA | + |
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Preference number: 3 (lower is better) Translates to: GFNFTLLPQPSK*CVMNMNQHAQL Trigger: TAGTTGGGCGTGCTGGTTCATGTTCATGACGCAGCACTTGGAAGGCTGAGGCAGGAGTGTGAAGTTGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | ATGGCCTTGCAGTATATGTTCACTGGCAGGACATCCTaGCACACGATCCCAAGTCTCCTTAGCTGGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: MALQYMFTGRTS*HTIPSLLSWCS Trigger: GCTGCACCAGCTAAGGAGACTTGGGATCGTGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | CAGCAATCGCTGTGTTCAGCAAGGTCCCCATGGCCTTaGAGTATATGTTCACTGGCAGGACATCCTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: QQSLCSARSPWP*SICSLAGHPAT Trigger: TGTGGCAGGATGTCCTGCCAGTGAACATATACTGCAAGGCCATGGGGACCTTGCTGAACACAGCGATTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAATGCAGTTGCCAGGGGCCCTTTTCCATCTGCCCACCGATCTCCAATTTCGAACCCACCAGTGCTTaGCGTAAATTGATCATCGTA | + |
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Preference number: 3 (lower is better) Translates to: RECSCQGPFSICPPISNFEPTSA*RKLIIV Trigger: TACGATGATCAATTTACGCAAAGCACTGGTGGGTTC...GAAATTGGAGATCGGTGGGCAGATGGAAAAGGGCCCCTGGCAACTGCATTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 72 bp | TTTCTGTGTTCTGGAACAAGGCACGGATTAAAGCTTTaGCTTCGCTGGAAGGGAATGCAGTTGCCAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FLCSGTRHGLKL*LRWKGMQLPGA Trigger: GGCCCCTGGCAACTGCATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | CTTGACAATCTCTCCAGAAGTTCTCCTTTCTGTGCCTaGATTTGGGCCAAAAAGCACTCCGTCCCAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LDNLSRSSPFCA*IWAKKHSVPSL Trigger: AAGACTTGGGACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAAAGGAGAACTTCTGGAGAGATTGTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 72 bp | TATCACCATCTTCAGTCGAGATGTCCTCTAGAGCAGTaGTCCTGCTCATCATCTCAGCAATCGCTGTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: YHHLQSRCPLEQ*SCSSSQQSLCS Trigger: TGAACACAGCGATTGCTGAGATGATGAGCAGGATCACTGCTCTAGAGGACATCTCGACTGAAGATGGTGATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR CCA 72 bp | ATCTTAGCAAGGGCAGCTGCTCTTCTTTCTGTGTTCTaGAACAAGGCACGGATTAAAGCTTTGACTTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: ILARAAALLSVF*NKARIKALTSL Trigger: CAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAAGAAGAGCAGCTGCCCTTGCTAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR GCA 72 bp | GTGCAAACACTTGTGGACCTTCATCCATCACTGTTTTaGACAGGGAATACAATCTATCACCATCTTCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: VQTLVDLHPSLF*TGNTIYHHLQS Trigger: CGACTGAAGATGGTGATAGATTGTATTCCCTGTGCAAAACAGTGATGGATGAAGGTCCACAAGTGTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| 3UTR TCA 72 bp | CAGGCAAGGATGTCCTTATGTGAAGTTACGCTTCCATaGTATACTGGCTCACCAAAACCAACAAGTAATTCC | + |
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Preference number: 3 (lower is better) Translates to: QARMSLCEVTLP*YTGSPKPTSNS Trigger: GGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCACATAAGGACATCCTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAAGCTAGCTTGTAGCATTATCATGAGTTCTTTGAAAGGCATCCATTTGGACTCATCCATCACTGTTTaGCACAGGGAATACAATCTA | + |
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Preference number: 3 (lower is better) Translates to: CKLACSIIMSSLKGIHLDSSITV*HREYNL Trigger: TAGATTGTATTCCCTGTGCAAAACAGTGATGGATGA...GTCCAAATGGATGCCTTTCAAAGAACTCATGATAATGCTACAAGCTAGCTTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAGCCGGGTCAGGCGGCTaGTCCTGGTGCCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVAGSGG*SWCPDP Trigger: AGGATCTGGGCACCAGGATCAGCCGCCTGACCCGGC...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTATGCATACTTCACCCTTaGTCTCCTCCACCCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVCILHP*SPPPAG Trigger: CCCGGCGGGTGGAGGAGATCAAGGGTGAAGTATGCA...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAAGCTGGTGCAGCACCTaGCTCACTGCCTTGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVSWCST*LTALLA Trigger: AGCGAGCAAGGCAGTGAGGCAGGTGCTGCACCAGCT...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGTCCAGGCTCCCCGAGTaGGCCAAGACTTCTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQSRLPE*AKTSVT Trigger: CGTGACAGAAGTCTTGGCCCACTCGGGGAGCCTGGA...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | AGGGAATGCAGTTGCCAGGGGCCCTTTTCCATCTGCCCACCGATCTCCAATTTCAATCGGGACCAATCTTaGCAGTGTTGTGAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RECSCQGPFSICPPISNFNRDQS*QCCESQ Trigger: CTGAGATTCACAACACTGTCAAGATTGGTCCCGATT...GAAATTGGAGATCGGTGGGCAGATGGAAAAGGGCCCCTGGCAACTGCATTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGAGTCTCCTTAGCTGGTaGAGCACCTGCCTCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AATVNEPTSALRKLIIVMSLLSW*STCLTA Trigger: GGCAGTGAGGCAGGTGCTGCACCAGCTAAGGAGACT...CATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| 3UTR CAA 72 bp | CTTTCTGTGTTCTGGAACAAGGCACGGATTAAAGCTTaGACTTCGCTGGAAGGGAATGCAGTTGCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSVFWNKARIKA*TSLEGNAVARG Trigger: GCCCCTGGCAACTGCATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTGCCTTGTTCCAGAACACAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTAACTTCAAGCACTCCTaGGCCTCCTCCAGGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TVNEPTSALRKLIIVMSSNFKHS*ASSRCR Trigger: TCGGCACCTGGAGGAGGCTCAGGAGTGCTTGAAGTT...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCCCAAGAGGACAGAACTaGTGGACGGCAGAGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIMYTTLKRAWEQITLRSPRGQN*WTAEES Trigger: TGACTCCTCTGCCGTCCATCAGTTCTGTCCTCTTGG...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCACTGGCAGGACATCCTaGCACACGATCCCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIMYTTLKRAWEQITLRSTGRTS*HTIPSL Trigger: GAGACTTGGGATCGTGTGGCAGGATGTCCTGCCAGT...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAGGGCCCTTTTCCATCTaGCCACCGATCTCCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVGPFSI*PPISNF Trigger: GAAATTGGAGATCGGTGGGCAGATGGAAAAGGGCCC...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCTTCGCTGGAAGGGAATaGAGTTGCCAGGGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIMYTTLKRAWEQITLRSFAGRE*SCQGPF Trigger: AAAGGGCCCCTGGCAACTGCATTCCCTTCCAGCGAA...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGAGTTGTTGTGGTGAATaGCAGCCAACTGGGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQSCCGE*QPTGGA Trigger: AGCTCCCCCAGTTGGCTGCCATTCACCACAACAACT...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| 3UTR CAA 72 bp | CAATCTCTCCAGAAGTTCTCCTTTCTGTGCCTGCATTaGGGCCAAAAAGCACTCCGTCCCAAGTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSLQKFSFLCLH*GQKALRPKSSE Trigger: TTCAGAAGACTTGGGACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAAAGGAGAACTTCTGGAGAGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAGCAGTATATGTTCACTaGCAGGACATCCTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVAVYVH*QDILPH Trigger: GTGTGGCAGGATGTCCTGCCAGTGAACATATACTGC...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCCGAAGGTTCTCCTTGTGGTATGTTGGTACCACATCATGGAACAAATGGATGTACTTGTAGCTTGTaGTCAGCATCAGGACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASEGSPCGMLVPHHGTNGCTCSL*SASGLG Trigger: ACCCAGTCCTGATGCTGATCACAAGCTACAAGTACA...TCCATTTGTTCCATGATGTGGTACCAACATACCACAAGGAGAACCTTCGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAAGGGTCAGCAAGTGGTaGGCAATATACATGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVRVSKW*AIYMQL Trigger: CAACTGCATGTATATTGCTCACCACTTGCTGACCCT...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTACTTAGCAAGGGCAGCTaGTCTTCTTTCTGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVLSKGS*SSFCVL Trigger: CAGAACACAGAAAGAAGAGCAGCTGCCCTTGCTAAG...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGGAGTCTCTTTCCAGCTaGTGCTTCAGGTTTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AATVNEPTSALRKLIIVMESLSS*CFRFVN Trigger: GTTTACAAACCTGAAGCAGCAGCTGGAAAGAGACTC...CATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTAGTATGTTCTGCTTCTaGACGGTGAGCTCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVNEPTSALRKLIIVMSSSMFCF*TVSSML Trigger: CAGCATGGAGCTCACCGTGCAGAAGCAGAACATACT...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCTAGAAGCTGTTTCTaGAGCACTTCCAGGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AATVNEPTSALRKLIIVMSRSCF*STSRTN Trigger: ATTGGTCCTGGAAGTGCTCCAGAAACAGCTTCTAGA...CATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTCAAGATCCACAAAGGTaGTCGTGCCATCGCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVNEPTSALRKLIIVMSSQDPQR*SCHRKG Trigger: TCCTTTGCGATGGCACGACCACCTTTGTGGATCTTG...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | GTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAAGTAATTCCGTGTACTTGTAGCTTGTaGTCAGCATCAGGACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLRFHDILAHQNQQVIPCTCSL*SASGLG Trigger: ACCCAGTCCTGATGCTGATCACAAGCTACAAGTACA...CGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTGAAGATATTCCTCACTaGGTAGAAGAGCTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVNEPTSALRKLIIVMSSEDIPH*VEELDS Trigger: GCTGTCCAGCTCTTCTACTCAGTGAGGAATATCTTC...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATAATATGCAGTTGTTGTGGTaGATGGCAGCCAACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAHQNQQVIPRGFEGNNMQLLW*MAANWG Trigger: CCCCCAGTTGGCTGCCATTCACCACAACAACTGCAT...ATTATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAAAAGCTTCTAGCACTTaGCAATCTCTCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVKASST*QSLQKF Trigger: GAACTTCTGGAGAGATTGTCAAGTGCTAGAAGCTTT...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATCATACAACCAGCTTCTaGCAGTCTTCTCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNHTTSF*QSSPRW Trigger: CCACCTGGGAGAAGACTGGCAGAAGCTGGTTGTATG...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGGCAGAGGAAAACTCTTaGAGTTGTTTGAGCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQAEENS*SCLSRV Trigger: AACTCTGCTCAAACAACTCCAAGAGTTTTCCTCTGC...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| 3UTR CAA 72 bp | GCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATaGATCATCGTAATGTCCAGTTCAGAAAACCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVNEPTSALRK*IIVMSSSENLR Trigger: ACGAAGGTTTTCTGAACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCGACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTACACTGTACTTCTTGCTaGTCATATTGCATACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAATVNEPTSALRKLIIVHCTSC*SYCILH Trigger: GTGAAGTATGCAATATGATCAGCAAGAAGTACAGTG...TACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGTCGCTGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | GTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAAGTAATTCCGACTCTTGGAGTTGTTTaGGCAGAGTTAGGACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLRFHDILAHQNQQVIPTLGVV*AELGLQ Trigger: CTGTAGTCCTAACTCTGCTCAAACAACTCCAAGAGT...CGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCTAGCTTGTAGCATTATCATGAGTTCTTTGAAAGGCATCCATTTGGACGGTAAAGAAAAGGACTaGGGGTCCAGAGAAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKLACSIIMSSLKGIHLDGKEKD*GSREVS Trigger: TGAGACTTCTCTGGACCCTCAGTCCTTTTCTTTACC...GTCCAAATGGATGCCTTTCAAAGAACTCATGATAATGCTACAAGCTAGCTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR GCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATCACTGCCTTGCTCGCTaGAGAGTAATTCTCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNHCLAR*RVILFV Trigger: GACGAAGAGAATTACTCTGCAGCGAGCAAGGCAGTG...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | GTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAAGTAATTCCGTTCATCAGACAGAGGTaGAAACACTTGTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLRFHDILAHQNQQVIPFIRQR*KHLWTF Trigger: GAAGGTCCACAAGTGTTTGCACCTCTGTCTGATGAA...CGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATTTCTGTGCCTGCATTTaGGCCAAAAAGCACTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNFCACI*AKKHSV Trigger: GACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAA...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGAAAAGCTTCGGGTGGTaGTGGGTGTTCCAAGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLECPKPGSKIIMYTTLKKSFGW*WVFQVR Trigger: ACGGACTTGGAACACCCATCACCACCCGAAGCTTTT...CTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTATGTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAATCTCCGGCTGCTCAGTaGATAAATGAAGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPYVKLRFHDILAHQNQQSPAAQ*INEALF Trigger: AAACAGAGCTTCATTTATGCACTGAGCAGCCGGAGA...TTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCACATAAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATCAGTCTTCTCCCAGGTaGTACAGTATGTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNQSSPR*YSMFCF Trigger: GAAGCAGAACATACTGTACCACCTGGGAGAAGACTG...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCGCCACAATCACATCCTaGCACTTCTTATTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIMYTTLKRAWEQITLRSATITS*HFLLAK Trigger: TTTTGCTAATAAGAAGTGCCAGGATGTGATTGTGGC...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATAATGGTAAAGAAAAGGACTaGGGGTCCAGAGAAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILAHQNQQVIPRGFEGNNGKEKD*GSREVS Trigger: TGAGACTTCTCTGGACCCTCAGTCCTTTTCTTTACC...ATTATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR CCA 90 bp | CTAACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAGCTGGACAGCACATTaGTCGCTACTTGTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLECPKPGSKIIMYTTLSWTAH*SLLVVA Trigger: GGCAACAACAAGTAGCGACCAATGTGCTGTCCAGCT...GAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATAATTACTTCAGCAGCATCTaGCCAAATGACTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILAHQNQQVIPRGFEGNNYFSSI*PNDFSL Trigger: CAAGCTGAAGTCATTTGGTCAGATGCTGCTGAAGTA...ATTATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | CTAACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCCACGGATTAAAGCTTTaGCTTCGCTGGAAGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTLECPKPGSKIIMYTTLHGLKL*LRWKGM Trigger: CATTCCCTTCCAGCGAAGTCAAAGCTTTAATCCGTG...GAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATTCTCTTTCCAGCTGCTaGTTCAGGTTTGTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNSLSSC*FRFVNS Trigger: TGAGTTTACAAACCTGAAGCAGCAGCTGGAAAGAGA...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR GCA 90 bp | CTAACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCTCTCCTTTCTGTGCCTaGATTTGGGCCAAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLECPKPGSKIIMYTTLSPFCA*IWAKKH Trigger: GTGCTTTTTGGCCCAAATGCAGGCACAGAAAGGAGA...GAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTATGTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAACAAATGACTTCAGCTTaGTGGGTAATTCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CPYVKLRFHDILAHQNQQQMTSA*WVILQE Trigger: TTCTTGGAGAATTACCCACCAAGCTGAAGTCATTTG...TTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCACATAAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGAAAGGCATCCATTTGGACACATAGACGGGAACCTCTTCTTGGTATTTGCCACAATCACATCCTaGCACTTCTTATTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFERHPFGHIDGNLFLVFATITS*HFLLAK Trigger: TTTTGCTAATAAGAAGTGCCAGGATGTGATTGTGGC...AAATACCAAGAAGAGGTTCCCGTCTATGTGTCCAAATGGATGCCTTTCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTACATCATGGAACAAATaGAAGATATTCCTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVNEPTSALRKLIIVMSSTSWNK*KIFLTE Trigger: CTCAGTGAGGAATATCTTCCATTTGTTCCATGATGT...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | GATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATCTCCTTGTGGTATGTTaGTACCACATCATGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: DILAHQNQQVIPRGFEGNLLVVC*YHIMEQ Trigger: TTGTTCCATGATGTGGTACCAACATACCACAAGGAG...ATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCTCAGCAAGGTCCCCATaGCCTTGCAGTATATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLECPKPGSKIIMYTTLSARSP*PCSICS Trigger: TGAACATATACTGCAAGGCCATGGGGACCTTGCTGA...GAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGAATCGGGACCAATCTTaGCAGTGTTGTGAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLECPKPGSKIIMYTTLKNRDQS*QCCESQ Trigger: CTGAGATTCACAACACTGTCAAGATTGGTCCCGATT...CTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATAATAAGTTCTCCTTTCTGTaGCTGCATTTGGGCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILAHQNQQVIPRGFEGNNKFSFL*LHLGQK Trigger: TTTTTGGCCCAAATGCAGGCACAGAAAGGAGAACTT...ATTATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGATCCTGGATTTCAGCTaGTCGATGTCGTTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLECPKPGSKIIMYTTLKILDFS*SMSLDR Trigger: TCTATCTAACGACATCGACCAGCTGAAATCCAGGAT...CTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCCTTCTTTCTGTGTTCTaGAACAAGGCACGGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLECPKPGSKIIMYTTLLLSVF*NKARIK Trigger: TTTAATCCGTGCCTTGTTCCAGAACACAGAAAGAAG...GAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGAATGTCCAAAGCCAGGGTCTAAAATTATAATGTATACAACTCTCAAGGTTGGTACCACATCATaGAACAAATGGAAGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TLECPKPGSKIIMYTTLKVGTTS*NKWKIF Trigger: GAATATCTTCCATTTGTTCCATGATGTGGTACCAAC...CTTGAGAGTTGTATACATTATAATTTTAGACCCTGGCTTTGGACATTCCAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | TTCTTCACAGCCTCGCTGATGCGGCACGTGGGTAAAGAAAAGGACTaGGGGTCCAGAGAAGTCTCAGGCTCTAGGTTCCCGGCGTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFTASLMRHVGKEKD*GSREVSGSRFPASV Trigger: CACCGACGCCGGGAACCTAGAGCCTGAGACTTCTCTGGACCCTCAGTCCTTTTCTTTACCCACGTGCCGCATCAGCGAGGCTGTGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS TCA 90 bp | ACTGAGGGTCCAGAGAAGTCTCAGGCTCTAGGTTCCCGGCGTCGGTaGACTGCGCTTTGCAGACCGTCTGTACTTGTAGCTTGTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TEGPEKSQALGSRRR*TALCRPSVLVACDQ Trigger: CTGATCACAAGCTACAAGTACAGACGGTCTGCAAAGCGCAGTTCACCGACGCCGGGAACCTAGAGCCTGAGACTTCTCTGGACCCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS GCA 90 bp | AAGTCCGTCGTCAGAGACTCGAAACAAATGCTAACTGAACTTGGCTaGCTTTCAATCACAGCATGGAGCGACGGGCAGGTCACCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSVVRDSKQMLTELG*LSITAWSDGQVTRG Trigger: GCCTCTGGTGACCTGCCCGTCGCTCCATGCTGTGATTGAAAGGCAGCCAAGTTCAGTTAGCATTTGTTTCGAGTCTCTGACGACGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS CCA 90 bp | ATCCTGGATTTCAGCTGGTCGATGTCGTTAGATAGAGTGTCCACCTaGGTAACTAGGGCCTGCGCACTCTGCATGGTAGGCAGGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILDFSWSMSLDRVST*VTRACALCMVGRNS Trigger: TGAGTTCCTGCCTACCATGCAGAGTGCGCAGGCCCTAGTTACCCAGGTGGACACTCTATCTAACGACATCGACCAGCTGAAATCCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS CCA 90 bp | GGCGGAAACTTCCATACAACCAGCTTCTGCCAGTCTTCTCCCAGGTaGTACAGTATGTTCTGCTTCTGCACGGTGAGCTCCATGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGNFHTTSFCQSSPR*YSMFCFCTVSSMLR Trigger: TCTCAGCATGGAGCTCACCGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAAGCTGGTTGTATGGAAGTTTCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | TGGGTGTTCCAAGTCCGTCGTCAGAGACTCGAAACAAATGCTAACTaGACTTGGCTGCCTTTCAATCACAGCATGGAGCGACGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WVFQVRRQRLETNAN*TWLPFNHSMERRAG Trigger: ACCTGCCCGTCGCTCCATGCTGTGATTGAAAGGCAGCCAAGTTCAGTTAGCATTTGTTTCGAGTCTCTGACGACGGACTTGGAACACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS GCA 90 bp | CTGCTGGTATCTTTTGCCGGCGGAAACTTCCATACAACCAGCTTCTaGCAGTCTTCTCCCAGGTGGTACAGTATGTTCTGCTTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LLVSFAGGNFHTTSF*QSSPRWYSMFCFCT Trigger: CGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAAGCTGGTTGTATGGAAGTTTCCGCCGGCAAAAGATACCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | GTAAAGTCTGATAAGCGAGCTCCATTAACTTCTTCACAGCCTCGCTaGTGCGGCACGTGGGTAAAGAAAAGGACTGAGGGTCCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKSDKRAPLTSSQPR*CGTWVKKRTEGPEK Trigger: CTTCTCTGGACCCTCAGTCCTTTTCTTTACCCACGTGCCGCATCAGCGAGGCTGTGAAGAAGTTAATGGAGCTCGCTTATCAGACTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS GCA 90 bp | TCGTTAGATAGAGTGTCCACCTGGGTAACTAGGGCCTGCGCACTCTaGATGGTAGGCAGGAACTCACTGTACTTCTTGCTGATCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLDRVSTWVTRACAL*MVGRNSLYFLLIIL Trigger: CAATATGATCAGCAAGAAGTACAGTGAGTTCCTGCCTACCATGCAGAGTGCGCAGGCCCTAGTTACCCAGGTGGACACTCTATCTAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGTGGAAGGGAATGCAGTaGCCAGGGGCCCTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQWKGMQ*PGALFH Trigger: ATGGAAAAGGGCCCCTGGCAACTGCATTCCCTTCCA...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS GCA 90 bp | ACAACCAGCTTCTGCCAGTCTTCTCCCAGGTGGTACAGTATGTTCTaGTTCTGCACGGTGAGCTCCATGCTGAGAGACTTCAACATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSFCQSSPRWYSMF*FCTVSSMLRDFNIF Trigger: AAAAATGTTGAAGTCTCTCAGCATGGAGCTCACCGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAAGCTGGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS CCA 90 bp | TCGAAACAAATGCTAACTGAACTTGGCTGCCTTTCAATCACAGCATaGAGCGACGGGCAGGTCACCAGAGGCTTAAGGATATACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKQMLTELGCLSITA*SDGQVTRGLRIYFS Trigger: GCTGAAGTATATCCTTAAGCCTCTGGTGACCTGCCCGTCGCTCCATGCTGTGATTGAAAGGCAGCCAAGTTCAGTTAGCATTTGTTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS GCA 90 bp | AGCTTCTGCCAGTCTTCTCCCAGGTGGTACAGTATGTTCTGCTTCTaGACGGTGAGCTCCATGCTGAGAGACTTCAACATTTTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFCQSSPRWYSMFCF*TVSSMLRDFNIFKS Trigger: TGACTTAAAAATGTTGAAGTCTCTCAGCATGGAGCTCACCGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | CTTTCCAGCTGCTGCTTCAGGTTTGTAAACTCAACAGTTGATATGTaGAGATCCCGACAGACCTCAGTCTCTATCCTGGATTTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSCCFRFVNSTVDM*RSRQTSVSILDFSW Trigger: CCAGCTGAAATCCAGGATAGAGACTGAGGTCTGTCGGGATCTTCACATATCAACTGTTGAGTTTACAAACCTGAAGCAGCAGCTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | GGCAGAGGAGTCATGTCCTCTTTCTCCGGCTGCTCAGTGCATAAATaGAGCTCTGTTTGTAGACAAGACTCTAAGCTGCTGGTATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGVMSSFSGCSVHK*SSVCRQDSKLLVSF Trigger: AAAAGATACCAGCAGCTTAGAGTCTTGTCTACAAACAGAGCTTCATTTATGCACTGAGCAGCCGGAGAAAGAGGACATGACTCCTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | TCTGGTAAGGCTTCCTTACAATCGGGACCAATCTTGACAGTGTTGTaGATCTCAGAGGTCATGAGATTTCTAGCCGCCACAATCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGKASLQSGPILTVL*ISEVMRFLAATITS Trigger: GGATGTGATTGTGGCGGCTAGAAATCTCATGACCTCTGAGATTCACAACACTGTCAAGATTGGTCCCGATTGTAAGGAAGCCTTACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS CCA 90 bp | CAGTGCATAAATGAAGCTCTGTTTGTAGACAAGACTCTAAGCTGCTaGTATCTTTTGCCGGCGGAAACTTCCATACAACCAGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCINEALFVDKTLSC*YLLPAETSIQPASA Trigger: GGCAGAAGCTGGTTGTATGGAAGTTTCCGCCGGCAAAAGATACCAGCAGCTTAGAGTCTTGTCTACAAACAGAGCTTCATTTATGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS CCA 90 bp | CCAATTTCTAGGTCAGCATCAAGAGGCAAATCTAGAAGCTGTTTCTaGAGCACTTCCAGGACCAATCGGATCTTTGCAAAAGCTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PISRSASRGKSRSCF*STSRTNRIFAKASG Trigger: ACCCGAAGCTTTTGCAAAGATCCGATTGGTCCTGGAAGTGCTCCAGAAACAGCTTCTAGATTTGCCTCTTGATGCTGACCTAGAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTAAGGTCCCCATGGCCTaGCAGTATATGTTCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVNEPTSALRKLIIVMSSKVPMA*QYMFTG Trigger: GCCAGTGAACATATACTGCAAGGCCATGGGGACCTT...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS GCA 90 bp | GCTCAGTGCATAAATGAAGCTCTGTTTGTAGACAAGACTCTAAGCTaGTGGTATCTTTTGCCGGCGGAAACTTCCATACAACCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQCINEALFVDKTLS*WYLLPAETSIQPAS Trigger: AGAAGCTGGTTGTATGGAAGTTTCCGCCGGCAAAAGATACCAGCAGCTTAGAGTCTTGTCTACAAACAGAGCTTCATTTATGCACTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ATACTGGCTCACCAAAACCAACAAGTAATTCCGAGAGGTTTTGAAGGAAATAATTTGCATACTTCACCCTaGATCTCCTCCACCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ILAHQNQQVIPRGFEGNNLHTSP*ISSTRR Trigger: CCGGCGGGTGGAGGAGATCAAGGGTGAAGTATGCAA...ATTATTTCCTTCAAAACCTCTCGGAATTACTTGTTGGTTTTGGTGAGCCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGGGTCGCTACTTGTTGTaGCCTCAAGTAAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQGRYLL*PQVKSD Trigger: ATCAGACTTTACTTGAGGCAACAACAAGTAGCGACC...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTCAATGAACCCACCAGTGCTTTGCGTAAATTGATCATCGTAATGTCCAGTTTTCTGTGCCTGCATTaGGGCCAAAAAGCACTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TVNEPTSALRKLIIVMSSFLCLH*GQKALR Trigger: ACGGAGTGCTTTTTGGCCCAAATGCAGGCACAGAAA...ACTGGACATTACGATGATCAATTTACGCAAAGCACTGGTGGGTTCATTGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | AGAGTCTCTTTCCAGCTGCTGCTTCAGGTTTGTAAACTCAACAGTTaGTATGTGAAGATCCCGACAGACCTCAGTCTCTATCCTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RVSFQLLLQVCKLNS*YVKIPTDLSLYPGF Trigger: AAATCCAGGATAGAGACTGAGGTCTGTCGGGATCTTCACATATCAACTGTTGAGTTTACAAACCTGAAGCAGCAGCTGGAAAGAGACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS TCA 90 bp | GTATGTTGGTACCACATCATGGAACAAATGGAAGATATTCCTCACTaGGTAGAAGAGCTGGACAGCACATTGGTCGCTACTTGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCWYHIMEQMEDIPH*VEELDSTLVATCCC Trigger: GCAACAACAAGTAGCGACCAATGTGCTGTCCAGCTCTTCTACTCAGTGAGGAATATCTTCCATTTGTTCCATGATGTGGTACCAACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCCACATTGGTCGCTACTaGTTGTTGCCTCAAGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IIMYTTLKRAWEQITLRSHIGRY*LLPQVK Trigger: CTTTACTTGAGGCAACAACAAGTAGCGACCAATGTG...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAACTCTTGGAGTTGTTaGAGCAGAGTTAGGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: IIMYTTLKRAWEQITLRSNSWSC*SRVRTT Trigger: TGTAGTCCTAACTCTGCTCAAACAACTCCAAGAGTT...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTTACGCTTCCATGATATACTGGCTCACCAAAACCAACAAGTAATTCCGAGCAGAGGAAAACTCTaGGAGTTGTTTGAGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VKLRFHDILAHQNQQVIPSRGKL*ELFEQS Trigger: ACTCTGCTCAAACAACTCCAAGAGTTTTCCTCTGCT...CGGAATTACTTGTTGGTTTTGGTGAGCCAGTATATCATGGAAGCGTAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCATTGGTCGCTACTTGTaGTTGCCTCAAGTAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IIMYTTLKRAWEQITLRSIGRYL*LPQVKS Trigger: AGACTTTACTTGAGGCAACAACAAGTAGCGACCAAT...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS-3UTR CAA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGTCATCCATCACTGTTTaGCACAGGGAATACAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQSSITV*HREYNL Trigger: TAGATTGTATTCCCTGTGCAAAACAGTGATGGATGA...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | ATTATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCTTCTTGCTGATCATATaGCATACTTCACCCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: IIMYTTLKRAWEQITLRSFLLII*HTSPLI Trigger: GATCAAGGGTGAAGTATGCAATATGATCAGCAAGAA...GCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | TATAATGTATACAACTCTCAAGAGGGCCTGGGAACAAATCACACTGCGGAGCAGATTATCATGAGTTCTTaGAAAGGCATCCATTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YNVYNSQEGLGTNHTAEQIIMSS*KGIHLD Trigger: GTCCAAATGGATGCCTTTCAAAGAACTCATGATAAT...CTGCTCCGCAGTGTGATTTGTTCCCAGGCCCTCTTGAGAGTTGTATACATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGAAAGGCATCCATTTGGACACATAGACGGGAACCTCTTCTTGGTATTTACCATTGGTCGCTACTaGTTGTTGCCTCAAGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FFERHPFGHIDGNLFLVFTIGRY*LLPQVK Trigger: CTTTACTTGAGGCAACAACAAGTAGCGACCAATGGT...AAATACCAAGAAGAGGTTCCCGTCTATGTGTCCAAATGGATGCCTTTCAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTGTGGTATGTTGGTACCACATCATGGAACAAATGGAAGATATTCCTCAATTGGTCGCTACTTGTaGTTGCCTCAAGTAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPCGMLVPHHGTNGRYSSIGRYL*LPQVKS Trigger: AGACTTTACTTGAGGCAACAACAAGTAGCGACCAAT...TGAGGAATATCTTCCATTTGTTCCATGATGTGGTACCAACATACCACAAGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213787.2 |
||
| CDS TCA 90 bp | TTTCTAGCCGCCACAATCACATCCTGGCACTTCTTATTAGCAAAATaGGAATTGATATTGCGAGCATATTTCAGCAAGTCAGTAGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: FLAATITSWHFLLAK*ELILRAYFSKSVVS Trigger: CGATACTACTGACTTGCTGAAATATGCTCGCAATATCAATTCTCATTTTGCTAATAAGAAGTGCCAGGATGTGATTGTGGCGGCTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
||
| CDS TCA 72 bp | GCCTCGCTGATGCGGCACGTGGGTAAAGAAAAGGACTaGGGGTCCAGAGAAGTCTCAGGCTCTAGGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ASLMRHVGKEKD*GSREVSGSRFP Trigger: CGGGAACCTAGAGCCTGAGACTTCTCTGGACCCTCAGTCCTTTTCTTTACCCACGTGCCGCATCAGCGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| CDS GCA 72 bp | AGAGTGTCCACCTGGGTAACTAGGGCCTGCGCACTCTaGATGGTAGGCAGGAACTCACTGTACTTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RVSTWVTRACAL*MVGRNSLYFLL Trigger: CAGCAAGAAGTACAGTGAGTTCCTGCCTACCATGCAGAGTGCGCAGGCCCTAGTTACCCAGGTGGACACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | CAGGACCAATCGGATCTTTGCAAAAGCTTCGGGTGGTaGTGGGTGTTCCAAGTCCGTCGTCAGAGACTCGAA | + |
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Preference number: 6 (lower is better) Translates to: QDQSDLCKSFGW*WVFQVRRQRLE Trigger: TTCGAGTCTCTGACGACGGACTTGGAACACCCATCACCACCCGAAGCTTTTGCAAAGATCCGATTGGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS GCA 72 bp | TTCTGCCAGTCTTCTCCCAGGTGGTACAGTATGTTCTaGTTCTGCACGGTGAGCTCCATGCTGAGAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: FCQSSPRWYSMF*FCTVSSMLRDF Trigger: GAAGTCTCTCAGCATGGAGCTCACCGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CCA 72 bp | TTCCATACAACCAGCTTCTGCCAGTCTTCTCCCAGGTaGTACAGTATGTTCTGCTTCTGCACGGTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FHTTSFCQSSPR*YSMFCFCTVSS Trigger: GGAGCTCACCGTGCAGAAGCAGAACATACTGTACCACCTGGGAGAAGACTGGCAGAAGCTGGTTGTATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS GCA 72 bp | GTCAGAGACTCGAAACAAATGCTAACTGAACTTGGCTaGCTTTCAATCACAGCATGGAGCGACGGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VRDSKQMLTELG*LSITAWSDGQV Trigger: GACCTGCCCGTCGCTCCATGCTGTGATTGAAAGGCAGCCAAGTTCAGTTAGCATTTGTTTCGAGTCTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 72 bp | GCTGTTTCTGGAGCACTTCCAGGACCAATCGGATCTTaGCAAAAGCTTCGGGTGGTGATGGGTGTTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AVSGALPGPIGS*QKLRVVMGVPS Trigger: ACTTGGAACACCCATCACCACCCGAAGCTTTTGCAAAGATCCGATTGGTCCTGGAAGTGCTCCAGAAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 90 bp | AATCTAGAAGCTGTTTCTGGAGCACTTCCAGGACCAATCGGATCTTaGCAAAAGCTTCGGGTGGTGATGGGTGTTCCAAGTCCGTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: NLEAVSGALPGPIGS*QKLRVVMGVPSPSS Trigger: TGACGACGGACTTGGAACACCCATCACCACCCGAAGCTTTTGCAAAGATCCGATTGGTCCTGGAAGTGCTCCAGAAACAGCTTCTAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | AAGCATTTTCTGGACTTTAATAACTTCAAGCACTCCTaGGCCTCCTCCAGGTGCCGAGCAGCAGGGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: KHFLDFNNFKHS*ASSRCRAAGMY Trigger: GTACATCCCTGCTGCTCGGCACCTGGAGGAGGCTCAGGAGTGCTTGAAGTTATTAAAGTCCAGAAAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | ATTCTCCAAGAATGGAAAAGGCCAAGAGGACAGAACTaGTGGACGGCAGAGGAGTCATGTCCTCTTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ILQEWKRPRGQN*WTAEESCPLSP Trigger: CGGAGAAAGAGGACATGACTCCTCTGCCGTCCATCAGTTCTGTCCTCTTGGCCTTTTCCATTCTTGGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | AACTGCGCTTTGCAGACCGTCTGTACTTGTAGCTTGTaGTCAGCATCAGGACTGGGTAAGTCTGGTAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NCALQTVCTCSL*SASGLGKSGKA Trigger: AGCCTTACCAGACTTACCCAGTCCTGATGCTGATCACAAGCTACAAGTACAGACGGTCTGCAAAGCGCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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| CDS GCA 72 bp | GCAGAGGAGTCATGTCCTCTTTCTCCGGCTGCTCAGTaGATAAATGAAGCTCTGTTTGTAGACAAGACTCTA | + |
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Preference number: 6 (lower is better) Translates to: AEESCPLSPAAQ*INEALFVDKTL Trigger: TAGAGTCTTGTCTACAAACAGAGCTTCATTTATGCACTGAGCAGCCGGAGAAAGAGGACATGACTCCTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 72 bp | AGTAGAAGAGCTGGACAGCACATTGGTCGCTACTTGTaGTTGCCTCAAGTAAAGTCTGATAAGCGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SRRAGQHIGRYL*LPQVKSDKRAP Trigger: TGGAGCTCGCTTATCAGACTTTACTTGAGGCAACAACAAGTAGCGACCAATGTGCTGTCCAGCTCTTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 72 bp | CTGAGTAGAAGAGCTGGACAGCACATTGGTCGCTACTaGTTGTTGCCTCAAGTAAAGTCTGATAAGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSRRAGQHIGRY*LLPQVKSDKRA Trigger: AGCTCGCTTATCAGACTTTACTTGAGGCAACAACAAGTAGCGACCAATGTGCTGTCCAGCTCTTCTACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | GTCACCAGAGGCTTAAGGATATACTTCAGCAGCATCTaGCCAAATGACTTCAGCTTGGTGGGTAATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VTRGLRIYFSSI*PNDFSLVGNSP Trigger: TGGAGAATTACCCACCAAGCTGAAGTCATTTGGTCAGATGCTGCTGAAGTATATCCTTAAGCCTCTGGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CCA 72 bp | AGGTCAGCATCAAGAGGCAAATCTAGAAGCTGTTTCTaGAGCACTTCCAGGACCAATCGGATCTTTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: RSASRGKSRSCF*STSRTNRIFAK Trigger: TTTTGCAAAGATCCGATTGGTCCTGGAAGTGCTCCAGAAACAGCTTCTAGATTTGCCTCTTGATGCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 72 bp | AGAAGAGCTGGACAGCACATTGGTCGCTACTTGTTGTaGCCTCAAGTAAAGTCTGATAAGCGAGCTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: RRAGQHIGRYLL*PQVKSDKRAPL Trigger: TAATGGAGCTCGCTTATCAGACTTTACTTGAGGCAACAACAAGTAGCGACCAATGTGCTGTCCAGCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS CAA 90 bp | TCACTGAGTAGAAGAGCTGGACAGCACATTGGTCGCTACTTGTTGTaGCCTCAAGTAAAGTCTGATAAGCGAGCTCCATTAACTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSRRAGQHIGRYLL*PQVKSDKRAPLTSS Trigger: TGAAGAAGTTAATGGAGCTCGCTTATCAGACTTTACTTGAGGCAACAACAAGTAGCGACCAATGTGCTGTCCAGCTCTTCTACTCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | TTCCAGCTGCTGCTTCAGGTTTGTAAACTCAACAGTTaGTATGTGAAGATCCCGACAGACCTCAGTCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: FQLLLQVCKLNS*YVKIPTDLSLY Trigger: ATAGAGACTGAGGTCTGTCGGGATCTTCACATATCAACTGTTGAGTTTACAAACCTGAAGCAGCAGCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | TACCACATCATGGAACAAATGGAAGATATTCCTCACTaGGTAGAAGAGCTGGACAGCACATTGGTCGCTACT | + |
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Preference number: 6 (lower is better) Translates to: YHIMEQMEDIPH*VEELDSTLVAT Trigger: AGTAGCGACCAATGTGCTGTCCAGCTCTTCTACTCAGTGAGGAATATCTTCCATTTGTTCCATGATGTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS GCA 72 bp | TTGAGCAGAGTTAGGACTACAGAGTCTCTTTCCAGCTaGTGCTTCAGGTTTGTAAACTCAACAGTTGATATG | + |
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Preference number: 6 (lower is better) Translates to: LSRVRTTESLSS*CFRFVNSTVDM Trigger: CATATCAACTGTTGAGTTTACAAACCTGAAGCAGCAGCTGGAAAGAGACTCTGTAGTCCTAACTCTGCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034803.10 |
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| CDS TCA 72 bp | GCCACAATCACATCCTGGCACTTCTTATTAGCAAAATaGGAATTGATATTGCGAGCATATTTCAGCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ATITSWHFLLAK*ELILRAYFSKS Trigger: TGACTTGCTGAAATATGCTCGCAATATCAATTCTCATTTTGCTAATAAGAAGTGCCAGGATGTGATTGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034803.10 ENSMUST00000213787.2 |
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