Pregenerated sensors for ZUP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039531Ensembl transcript IDs: ENSMUST00000048222.6, ENSMUST00000218055.2, ENSMUST00000218222.2, ENSMUST00000218275.2, ENSMUST00000218880.2, ENSMUST00000219457.2, ENSMUST00000219878.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCTGTAAACACTTGCGAAGCTTGTTTCCTGGCAACTTTTTCCTCTaGGGAAAGAACACCCTCTACTGCTACTATCTGGTACTGCTTATG | + |
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Preference number: 1 (lower is better) Translates to: RCKHLRSLFPGNFFL*GKNTLYCYYLVLLM Trigger: CATAAGCAGTACCAGATAGTAGCAGTAGAGGGTGTTCTTTCCCCAGAGGAAAAAGTTGCCAGGAAACAAGCTTCGCAAGTGTTTACAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218275.2 |
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| 3UTR TCA 90 bp | CATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTTGACTTGTaGAAATCAATAATGCGGCACTTTACTCTCAGTGAGGTCAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: HSNKRGCVPKGPVDL*KSIMRHFTLSEVRS Trigger: ACTTCTGACCTCACTGAGAGTAAAGTGCCGCATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR CCA 90 bp | CCATCTATGGTAATTGAGAGTTTTGCTGAGTATAGTAGCCTGGGCTaGCATTTGTATTCTCTTAGGGTATATATGACATCTGTCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: PSMVIESFAEYSSLG*HLYSLRVYMTSVQD Trigger: ATCCTGGACAGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTCAGCAAAACTCTCAATTACCATAGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR GCA 90 bp | GTTATTAAGTTGAGAGGCTCCCTGAGGATCAAAACCTTCATTCCATaGATCTTCAATCATGGACTGAATTTTTGGAATACAAGGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: VIKLRGSLRIKTFIP*IFNHGLNFWNTRNC Trigger: GCAGTTCCTTGTATTCCAAAAATTCAGTCCATGATTGAAGATGCATGGAATGAAGGTTTTGATCCTCAGGGAGCCTCTCAACTTAATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR GCA 90 bp | AGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTTAACAGTTTCTaGATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: SCLRLLASISCFNSF*ISREGHPGSNTSKH Trigger: ATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGTAGTCTTAGACAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR TCA 90 bp | TTAGCTTCCACATGTATGTGGGCTTTGTATTATTTATGTTGTTATTaGATATCAGCCTTAGTCCATGGGGATCTGATAGGATGCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: LASTCMWALYYLCCY*ISALVHGDLIGCMG Trigger: TCCCATGCATCCTATCAGATCCCCATGGACTAAGGCTGATATTCAATAACAACATAAATAATACAAAGCCCACATACATGTGGAAGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR CCA 90 bp | TGTCCATATTATCTATGGAATCTTCTACAGCTGATATTCTCTCACTaGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: CPYYLWNLLQLIFSH*RENDDLICFPVLEH Trigger: GTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCAGTGAGAGAATATCAGCTGTAGAAGATTCCATAGATAATATGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR CCA 90 bp | TTCCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTaGATTCATGTAAAGATACTGTGTAAATTTGGTTTTGTCATGGAA | + |
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Preference number: 1 (lower is better) Translates to: FPPCAVVSLYYPLMG*IHVKILCKFGFVME Trigger: TTCCATGACAAAACCAAATTTACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR TCA 90 bp | GATGCATGGGATTATTTCAACATTTCTATATCAGTTGAAGCCTGCTaGTTATATGGTCAATTTTGGAGAATGTACCATGAGGTGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: DAWDYFNISISVEAC*LYGQFWRMYHEVLR Trigger: TCTTAGCACCTCATGGTACATTCTCCAAAATTGACCATATAATCAGCAGGCTTCAACTGATATAGAAATGTTGAAATAATCCCATGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTCTGCTCTGCCACTTCTaGGGCCTGTCAACCATATTG | + |
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Preference number: 2 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSLLCHF*GLSTIL Trigger: CAATATGGTTGACAGGCCGCAGAAGTGGCAGAGCAG...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTCTGCTCTGCCACTTCTaGGGCCTGTCAACCATATTG | + |
|
Preference number: 2 (lower is better) Translates to: ISHRFPKLSKTTSLHILLLLCHF*GLSTIL Trigger: CAATATGGTTGACAGGCCGCAGAAGTGGCAGAGCAG...AAGCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCATACTGCTCTGCCACTTCTaGGGCCTGTCAACCATATTG | + |
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Preference number: 2 (lower is better) Translates to: TVSAFLEKDIQDQILASILLCHF*GLSTIL Trigger: CAATATGGTTGACAGGCCGCAGAAGTGGCAGAGCAG...TATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCGGAATCTTCTACAGCTaGTATTCTCTCACTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RFPTDFRSCLRLLASISCGIFYS*YSLTGE Trigger: CTCTCCAGTGAGAGAATATCAGCTGTAGAAGATTCC...GCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTCTCTTAGGGTATATATaGCATCTGTCCAGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCLLGYI*HLSRIF Trigger: GAAGATCCTGGACAGATGTCATATATACCCTAAGAG...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAGGTTTAGATGTACACACGATCTTTGGAGTTCCTTCCGTCTCTGAAGAATTTGTCCCCAAAAGATaGGTGAAAGTGATCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: IGGLDVHTIFGVPSVSEEFVPKR*VKVIHH Trigger: GTGGTGGATCACTTTCACTCATCTTTTGGGGACAAA...TTCTTCAGAGACGGAAGGAACTCCAAAGATCGTGTGTACATCTAAACCTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTGCTCCACCTCTTGGATaGAGATGTAGGCCTGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VVSLYYPLMGWIHVKILCAPPLG*RCRPVR Trigger: CCTTACAGGCCTACATCTGCATCCAAGAGGTGGAGC...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAGAACCACCTCCGAGTTTGTTTGATTCTTTGTATAGTTCTTTCTGTTTCGCTCCACCTCTTGGATaGAGATGTAGGCCTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LKEPPPSLFDSLYSSFCFAPPLG*RCRPVR Trigger: CCTTACAGGCCTACATCTGCATCCAAGAGGTGGAGC...GAAACAGAAAGAACTATACAAAGAATCAAACAAACTCGGAGGTGGTTCTTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCTCCAGTCAGTGCTTATaGGCTAACAAGCATTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RFPTDFRSCLRLLASISCSSQCL*ANKHFS Trigger: GGAGAAATGCTTGTTAGCGCATAAGCACTGACTGGA...GCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | TCGACTGTGACCCTGATGCTGGAGATAGATAGGAGGTTTAGATGTACACACGATACCCAAAGGACCAGTTaGCTTGTGAAAATCAATAAT | + |
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Preference number: 2 (lower is better) Translates to: STVTLMLEIDRRFRCTHDTQRTS*LVKINN Trigger: ATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGT...ATCGTGTGTACATCTAAACCTCCTATCTATCTCCAGCATCAGGGTCACAGTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTCCAGTGCAAACTATTTaGAGTTCTGTAGGCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCPVQTI*SSVGFL Trigger: TAAGAAGCCTACAGAACTCCAAATAGTTTGCACTGG...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR CAA 90 bp | ATGGTAATTGAGAGTTTTGCTGAGTATAGTAGCCTGGGCTGGCATTaGTATTCTCTTAGGGTATATATGACATCTGTCCAGGATCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MVIESFAEYSSLGWH*YSLRVYMTSVQDLL Trigger: CAGAAGATCCTGGACAGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTCAGCAAAACTCTCAATTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTACTGGTCCTTTAAGGTaGAAATCTTCATTCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCTGPLR*KSSFTY Trigger: ATAGGTGAATGAAGATTTTCACCTTAAAGGACCAGT...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTGGACCAGTTGACTTGTaGAAATCAATAATGCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FRFPTDFRSCLRLLASISGPVDL*KSIMRH Trigger: GTGCCGCATTATTGATTTTCACAAGTCAACTGGTCC...AGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGGGACCAGTTGACTTGTaGAAATCAATAATGCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FNSFCISREGHPGSNTSKGPVDL*KSIMRH Trigger: GTGCCGCATTATTGATTTTCACAAGTCAACTGGTCC...CTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGGGAAAGAACACCCTCTACTGCTACTATCTGGTACTGCTTATGTTTTAACCCAAAGGACCAGTTaGCTTGTGAAAATCAATAAT | + |
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Preference number: 2 (lower is better) Translates to: PLGKEHPLLLLSGTAYVLTQRTS*LVKINN Trigger: ATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGT...TAAAACATAAGCAGTACCAGATAGTAGCAGTAGAGGGTGTTCTTTCCCCAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGGAGATAGATAGGAGGTTTAGATGTACACACGATCTTTGGAGTTCCTTCCCTTTCTTGTCTTaGTTCTTCAGATTTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LMLEIDRRFRCTHDLWSSFPFLS*FFRFPL Trigger: AAGAGGAAATCTGAAGAATCAAGACAAGAAAGGGAA...GGAACTCCAAAGATCGTGTGTACATCTAAACCTCCTATCTATCTCCAGCATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGGGAAAGAACACCCTCTACTGCTACTATCTGGTACTGCTTATGTTTTACTGATATTCTCTCACTaGAGAGAAAATGATGATCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGKEHPLLLLSGTAYVLLIFSH*RENDDL Trigger: GAGATCATCATTTTCTCTCCAGTGAGAGAATATCAG...TAAAACATAAGCAGTACCAGATAGTAGCAGTAGAGGGTGTTCTTTCCCCAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR CAA 90 bp | GAGTTGAAGGCTCCCACTATTATTGTGAGCAGTGCAATGTGTGTTTaGAGCTTTACTAAAGTTTCTTTAATGAATGTGGATGCCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ELKAPTIIVSSAMCV*SFTKVSLMNVDALA Trigger: TGCAAGGGCATCCACATTCATTAAAGAAACTTTAGTAAAGCTCAAAACACACATTGCACTGCTCACAATAATAGTGGGAGCCTTCAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTTGCTTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATAGGACCAGTTGACTTGTaGAAATCAATAATGCGGCAC | + |
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Preference number: 2 (lower is better) Translates to: YLALTVSAFLEKDIQDQIGPVDL*KSIMRH Trigger: GTGCCGCATTATTGATTTTCACAAGTCAACTGGTCC...TATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTGAATTTTTCTTCCAGTaGAAACTATTTGGAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCEFFFQ*KLFGVL Trigger: CAGAACTCCAAATAGTTTGCACTGGAAGAAAAATTC...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTCCAGTGCAAACTATTTaGAGTTCTGTAGGCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSPVQTI*SSVGFL Trigger: TAAGAAGCCTACAGAACTCCAAATAGTTTGCACTGG...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTTTGATGAGTATGAAATGCCTTCCCTGTCCTGTTCCTTTGGTAACTTTTACAACTTTTTCCTCTaGGGAAAGAACACCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: FTFDEYEMPSLSCSFGNFYNFFL*GKNTLY Trigger: GTAGAGGGTGTTCTTTCCCCAGAGGAAAAAGTTGTA...AAAGTTACCAAAGGAACAGGACAGGGAAGGCATTTCATACTCATCAAAGGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR CAA 90 bp | TTTAGCTTCCACATGTATGTGGGCTTTGTATTATTTATGTTGTTATaGAATATCAGCCTTAGTCCATGGGGATCTGATAGGATGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: FSFHMYVGFVLFMLL*NISLSPWGSDRMHG Trigger: CCCATGCATCCTATCAGATCCCCATGGACTAAGGCTGATATTCAATAACAACATAAATAATACAAAGCCCACATACATGTGGAAGCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR-3UTR GCA 90 bp | AATAGTTCAATATCCATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTTGAAAACCTTCATTCCATaGATCTTCAATCATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: NSSISIQISEGVYPKDQLKTFIP*IFNHGL Trigger: CAGTCCATGATTGAAGATGCATGGAATGAAGGTTTT...CAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTTAACAGTTTCTGCATTTCTAAGAACACCCTCTACTaGTACTATCTGGTACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SCLRLLASISCFNSFCISKNTLY*YYLVLL Trigger: AAGCAGTACCAGATAGTAGCAGTAGAGGGTGTTCTT...AGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGTAGTCTTAGACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTCATGGACTGAATTTTTaGAATACAAGGAACTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ISHRFPKLSKTTSLHILLHGLNF*NTRNCH Trigger: ATGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATG...AAGCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTTAACAGTTTCTGCATTTCTCACACCTTACATCTGTaGCAGTGTTCTGATAATACC | + |
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Preference number: 2 (lower is better) Translates to: SCLRLLASISCFNSFCISHTLHL*QCSDNT Trigger: GGTATTATCAGAACACTGCCACAGATGTAAGGTGTG...AGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGTAGTCTTAGACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
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| 3UTR CAA 90 bp | GATCAAAACCTTCATTCCATGCATCTTCAATCATGGACTGAATTTTaGGAATACAAGGAACTGCCATACCTTTCAAGCAGTCACCATATA | + |
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Preference number: 2 (lower is better) Translates to: DQNLHSMHLQSWTEF*EYKELPYLSSSHHI Trigger: TATATGGTGACTGCTTGAAAGGTATGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGATTGAAGATGCATGGAATGAAGGTTTTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAGGTTTCATTGTGTCCCAAAAGTTTGGGTATGTTGTGGCTTTATTTTCATCTCTTAGGGTATATATaGCATCTGTCCAGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: IQVSLCPKSLGMLWLYFHLLGYI*HLSRIF Trigger: GAAGATCCTGGACAGATGTCATATATACCCTAAGAG...ATGAAAATAAAGCCACAACATACCCAAACTTTTGGGACACAATGAAACCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCATAATGTTCGGTTTTAAAACCTTCATTCCATaGATCTTCAATCATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: FLEKDIQDQILASIMFGFKTFIP*IFNHGL Trigger: CAGTCCATGATTGAAGATGCATGGAATGAAGGTTTT...AAAACCGAACATTATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCTGATATTCTCTCACTaGAGAGAAAATGATGATCTC | + |
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Preference number: 2 (lower is better) Translates to: FNSFCISREGHPGSNTSKLIFSH*RENDDL Trigger: GAGATCATCATTTTCTCTCCAGTGAGAGAATATCAG...CTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTCATGGACTGAATTTTTaGAATACAAGGAACTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: FRFPTDFRSCLRLLASISHGLNF*NTRNCH Trigger: ATGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATG...AGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGTTAGTGTCATTGTATGTTTGTTGAATTTGTGTTTTCAGGATCTGTCCTTGGGACCATGTGCTTaGAAAAATGTTTCCCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: TSVSVIVCLLNLCFQDLSLGPCA*KNVSQP Trigger: AGGTTGGGAAACATTTTTCCAAGCACATGGTCCCAA...GGACAGATCCTGAAAACACAAATTCAACAAACATACAATGACACTAACAGAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CAA 90 bp | ATTTGTTTCATAACTTCTGTTAGTGTCATTGTATGTTTGTTGAATTaGTGTTTTCAGGATCTGTCCACTGATGAGAGTGGGGAGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ICFITSVSVIVCLLN*CFQDLSTDESGELK Trigger: CTTCAACTCCCCACTCTCATCAGTGGACAGATCCTGAAAACACAAATTCAACAAACATACAATGACACTAACAGAAGTTATGAAACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CAA 90 bp | GTTACATCCATTTGTTTCATAACTTCTGTTAGTGTCATTGTATGTTaGTTGAATTTGTGTTTTCAGGATCTGTCCACTGATGAGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VTSICFITSVSVIVC*LNLCFQDLSTDESG Trigger: CCCACTCTCATCAGTGGACAGATCCTGAAAACACAAATTCAACAAACATACAATGACACTAACAGAAGTTATGAAACAAATGGATGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CAA 90 bp | GGATCTGATAGGATGCATGGGATTATTTCAACATTTCTATATCAGTaGAAGCCTGCTGATTATATGGTCAATTTTGGAGAATGTACCATG | + |
|
Preference number: 2 (lower is better) Translates to: GSDRMHGIISTFLYQ*KPADYMVNFGECTM Trigger: CATGGTACATTCTCCAAAATTGACCATATAATCAGCAGGCTTCAACTGATATAGAAATGTTGAAATAATCCCATGCATCCTATCAGATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CAA 90 bp | GTATTGTTTAGCTTCCACATGTATGTGGGCTTTGTATTATTTATGTaGTTATTGAATATCAGCCTTAGTCCATGGGGATCTGATAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: VLFSFHMYVGFVLFM*LLNISLSPWGSDRM Trigger: CATCCTATCAGATCCCCATGGACTAAGGCTGATATTCAATAACAACATAAATAATACAAAGCCCACATACATGTGGAAGCTAAACAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTACCCAAAGGACCAGTTaGCTTGTGAAAATCAATAAT | + |
|
Preference number: 2 (lower is better) Translates to: VVSLYYPLMGWIHVKILCTQRTS*LVKINN Trigger: ATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGT...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR GCA 90 bp | TATCTTGCTTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATAAAAACCTTCATTCCATaGATCTTCAATCATGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: YLALTVSAFLEKDIQDQIKTFIP*IFNHGL Trigger: CAGTCCATGATTGAAGATGCATGGAATGAAGGTTTT...TATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR GCA 90 bp | TATCTTGCTTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCCTCCATATCTTaGTTTAACAGTTTCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: YLALTVSAFLEKDIQDQILASIS*FNSFCI Trigger: AATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAG...TATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTTAACAGTTTCTGCATTTCTCTAGCCTCCATATCTTaGTTTAACAGTTTCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: SCLRLLASISCFNSFCISLASIS*FNSFCI Trigger: AATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAG...AGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGTAGTCTTAGACAACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CCA 90 bp | ATACAGGTTTCATTGTGTCCCAAAAGTTTGGGTATGTTGTGGCTTTATTTTCATCCAGTGCAAACTATTTaGAGTTCTGTAGGCTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: IQVSLCPKSLGMLWLYFHPVQTI*SSVGFL Trigger: TAAGAAGCCTACAGAACTCCAAATAGTTTGCACTGG...ATGAAAATAAAGCCACAACATACCCAAACTTTTGGGACACAATGAAACCTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR GCA 72 bp | GCCTGTAAGGGCCTGTCACAGCTGCTCTGCCACTTCTaGGGCCTGTCAACCATATTGTTGTTATTTATCACT | + |
|
Preference number: 3 (lower is better) Translates to: ACKGLSQLLCHF*GLSTILLLFIT Trigger: AGTGATAAATAACAACAATATGGTTGACAGGCCGCAGAAGTGGCAGAGCAGCTGTGACAGGCCCTTACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CCA 72 bp | TCTATCACTAGAACACTGGACTCTGTCCATGCCTATTaGAGAGCAACAACCCAGATCCAGTCAGTGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: SITRTLDSVHAY*RATTQIQSVLM Trigger: CATAAGCACTGACTGGATCTGGGTTGTTGCTCTCCAATAGGCATGGACAGAGTCCAGTGTTCTAGTGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
||
| 3UTR TCA 72 bp | AAGCGAGGGTGTGTACCCAAAGGACCAGTTGACTTGTaGAAATCAATAATGCGGCACTTTACTCTCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KRGCVPKGPVDL*KSIMRHFTLSE Trigger: CTCACTGAGAGTAAAGTGCCGCATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGTACACACCCTCGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR GCA 72 bp | TATTTGGGTCAAGGAATCTTCTCCGCTGTAAACACTTaGGAAGCTTGTTTCCTGGCAACTTTTTCCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLGQGIFSAVNT*EACFLATFSSG Trigger: CCCAGAGGAAAAAGTTGCCAGGAAACAAGCTTCGCAAGTGTTTACAGCGGAGAAGATTCCTTGACCCAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218275.2 |
||
| 3UTR GCA 72 bp | ATTGGAGAGCAACAACCCAGATCCAGTCAGTGCTTATaGGCTAACAAGCATTTCTCCTTAACTAGCGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: IGEQQPRSSQCL*ANKHFSLTSGC Trigger: ACATCCGCTAGTTAAGGAGAAATGCTTGTTAGCGCATAAGCACTGACTGGATCTGGGTTGTTGCTCTCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTTCAATATCCATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTTGCTCTGTCCATGCCTATaGGAGAGCAACAACCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NSSISIQISEGVYPKDQLLCPCL*ESNNPD Trigger: ATCTGGGTTGTTGCTCTCCAATAGGCATGGACAGAG...CAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGACTGTGACCCTGATGCTGGAGATAGATAGGAGGTTTAGATGTACACACGATTCATGGACTGAATTTTaGGAATACAAGGAACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: STVTLMLEIDRRFRCTHDSWTEF*EYKELP Trigger: TGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGA...ATCGTGTGTACATCTAAACCTCCTATCTATCTCCAGCATCAGGGTCACAGTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTGGTTTGTTCTTTTCATaGTGTCCTGGATTTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCGLFFS*CPGFPE Trigger: TTCAGGAAATCCAGGACACAATGAAAAGAACAAACC...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCCTCCAATCCAGGCCTTaGTTCCCTGTAATTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RFPTDFRSCLRLLASISCLQSRP*FPVICY Trigger: ATAACAAATTACAGGGAACAAAGGCCTGGATTGGAG...GCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTCACAGATTTCCGAAGTaGTCTAAGACTACTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSHRFPK*SKTTSL Trigger: GAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTG...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGAGGTTTAGATGTACACACGATCTTTGGAGTTCCTTCCGTCTCTGAAGAATCATGGACTGAATTTTaGGAATACAAGGAACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IGGLDVHTIFGVPSVSEESWTEF*EYKELP Trigger: TGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGA...TTCTTCAGAGACGGAAGGAACTCCAAAGATCGTGTGTACATCTAAACCTCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTCTCCAATCCAGGCCTTaGTTCCCTGTAATTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSLQSRP*FPVICY Trigger: ATAACAAATTACAGGGAACAAAGGCCTGGATTGGAG...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTTGCTTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATAATGTACACACGATCTTaGGAGTTCCTTCCGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLALTVSAFLEKDIQDQIMYTRS*EFLPSL Trigger: CAGAGACGGAAGGAACTCCAAAGATCGTGTGTACAT...TATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTTCATGGACTGAATTTTaGGAATACAAGGAACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSSWTEF*EYKELP Trigger: TGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGA...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGTTTCATTGTGTCCCAAAAGTTTGGGTATGTTGTGGCTTTATTTTCATACTCCAGCTTGTTTCTaGGGACCATGTGCTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IQVSLCPKSLGMLWLYFHTPACF*GPCAWK Trigger: TTTCCAAGCACATGGTCCCAAGAAACAAGCTGGAGT...ATGAAAATAAAGCCACAACATACCCAAACTTTTGGGACACAATGAAACCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGTTTCATTGTGTCCCAAAAGTTTGGGTATGTTGTGGCTTTATTTTCATGATGAGAGTGGGGAGTaGAAGGCTCCCACTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: IQVSLCPKSLGMLWLYFHDESGE*KAPTII Trigger: AATAATAGTGGGAGCCTTCAACTCCCCACTCTCATC...ATGAAAATAAAGCCACAACATACCCAAACTTTTGGGACACAATGAAACCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR TCA 72 bp | CTTGTGAAAATCAATAATGCGGCACTTTACTCTCAGTaGGGTCAGAAGTGTATAAATCTCACACGCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVKINNAALYSQ*GQKCINLTRSN Trigger: ATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGAGAGTAAAGTGCCGCATTATTGATTTTCACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR GCA 72 bp | TTGAGAGGCTCCCTGAGGATCAAAACCTTCATTCCATaGATCTTCAATCATGGACTGAATTTTTGGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: LRGSLRIKTFIP*IFNHGLNFWNT Trigger: TGTATTCCAAAAATTCAGTCCATGATTGAAGATGCATGGAATGAAGGTTTTGATCCTCAGGGAGCCTCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGTTAGTGTCATTGTATGTTTGTTGAATTTGTGTTTTCAGGATCTGTCCCACAGATTTCCGAAGTaGTCTAAGACTACTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSVSVIVCLLNLCFQDLSHRFPK*SKTTSL Trigger: GAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTG...GGACAGATCCTGAAAACACAAATTCAACAAACATACAATGACACTAACAGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR GCA 72 bp | ATATCTATCTACTCCAGCTTGTTTCTTGGGACCATGTaGTTGGAAAAATGTTTCCCAACCTTTTACTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISIYSSLFLGTM*LEKCFPTFYSK Trigger: CTTAGAGTAAAAGGTTGGGAAACATTTTTCCAAGCACATGGTCCCAAGAAACAAGCTGGAGTAGATAGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CCA 72 bp | TATCTATGGAATCTTCTACAGCTGATATTCTCTCACTaGAGAGAAAATGATGATCTCATCTGTTTCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLWNLLQLIFSH*RENDDLICFPV Trigger: CACTGGGAAACAGATGAGATCATCATTTTCTCTCCAGTGAGAGAATATCAGCTGTAGAAGATTCCATAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CCA 72 bp | GTAATTGAGAGTTTTGCTGAGTATAGTAGCCTGGGCTaGCATTTGTATTCTCTTAGGGTATATATGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VIESFAEYSSLG*HLYSLRVYMTS Trigger: AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTCAGCAAAACTCTCAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTTGCTTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATAGGTTTGTTCTTTTCATaGTGTCCTGGATTTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YLALTVSAFLEKDIQDQIGLFFS*CPGFPE Trigger: TTCAGGAAATCCAGGACACAATGAAAAGAACAAACC...TATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR TCA 72 bp | ACATGTATGTGGGCTTTGTATTATTTATGTTGTTATTaGATATCAGCCTTAGTCCATGGGGATCTGATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TCMWALYYLCCY*ISALVHGDLIG Trigger: TCCTATCAGATCCCCATGGACTAAGGCTGATATTCAATAACAACATAAATAATACAAAGCCCACATACATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR CCA 72 bp | GTGATGGGAAGAATTTTTCTTCCAGTGCAAACTATTTaGAGTTCTGTAGGCTTCTTATATGTTCATGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VMGRIFLPVQTI*SSVGFLYVHEN Trigger: ATTCTCATGAACATATAAGAAGCCTACAGAACTCCAAATAGTTTGCACTGGAAGAAAAATTCTTCCCATCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR TCA 72 bp | GGATGCATGGGATTATTTCAACATTTCTATATCAGTTaGAGCCTGCTGATTATATGGTCAATTTTGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GCMGLFQHFYIS*SLLIIWSILEN Trigger: ATTCTCCAAAATTGACCATATAATCAGCAGGCTTCAACTGATATAGAAATGTTGAAATAATCCCATGCATCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| 3UTR GCA 72 bp | TGGTCCTTTAAGGTGAAAATCTTCATTCACCTATTATaGTTAGGTTTGTTCTTTTCATTGTGTCCTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: WSFKVKIFIHLL*LGLFFSLCPGF Trigger: AAATCCAGGACACAATGAAAAGAACAAACCTAAGCATAATAGGTGAATGAAGATTTTCACCTTAAAGGACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CCA 72 bp | TTATTTATGTTGTTATTGAATATCAGCCTTAGTCCATaGGGATCTGATAGGATGCATGGGATTATTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LFMLLLNISLSP*GSDRMHGIIST Trigger: TGTTGAAATAATCCCATGCATCCTATCAGATCCCCATGGACTAAGGCTGATATTCAATAACAACATAAATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCCTGCTTTCTTCTAAATaGAAGTCCACATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAQRTEDQLHLLDADVGLLSSK*KSTCSW Trigger: CCAGGAACATGTGGACTTGCATTTAGAAGAAAGCAG...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCTCCATATGTCGTAGCTaGTGTTGTTTGTATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSAQRTEDQLHLLDADVGSICRS*CCLYPP Trigger: TGGAGGATACAAACAACAGCAGCTACGACATATGGA...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCGCTATGAAATTCAGATaGATGCATTCTTCCCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VSAQRTEDQLHLLDADVGAMKFR*MHSSPI Trigger: AATAGGGGAAGAATGCATCCATCTGAATTTCATAGC...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| 3UTR CAA 72 bp | TGTTTTCAGGATCTGTCCACTGATGAGAGTGGGGAGTaGAAGGCTCCCACTATTATTGTGAGCAGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CFQDLSTDESGE*KAPTIIVSSAM Trigger: CATTGCACTGCTCACAATAATAGTGGGAGCCTTCAACTCCCCACTCTCATCAGTGGACAGATCCTGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRENDDLICFPVLEHSPVDAQAE*MPEVTS Trigger: GGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATC...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGTTTGTCCCCAAAAGATaGGTGAAAGTGATCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRENDDLICFPVLEHSPVFVPKR*VKVIHH Trigger: GTGGTGGATCACTTTCACTCATCTTTTGGGGACAAA...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTACTGGACTCTGTCCATaGCTTGCTGAAAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCTGLCP*LAESCF Trigger: AAAGCAGCTTTCAGCAAGGCATGGACAGAGTCCAGT...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGAGGTCAGAAGTGTATAAATCTCACACGCTCCAATCCAGGCCTTTGTTCCTGCTTTCTTCTAAATaGAAGTCCACATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRSEVYKSHTLQSRPLFLLSSK*KSTCSW Trigger: CCAGGAACATGTGGACTTGCATTTAGAAGAAAGCAG...GAACAAAGGCCTGGATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CAA 72 bp | ATATTTGGGTCAAGGAATCTTCTCCGCTGTAAACACTaGCGAAGCTTGTTTCCTGGCAACTTTTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFGSRNLLRCKH*RSLFPGNFFLW Trigger: CCAGAGGAAAAAGTTGCCAGGAAACAAGCTTCGCAAGTGTTTACAGCGGAGAAGATTCCTTGACCCAAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218275.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGTGCCTTGCTGAAAGCTaGTTTCTTCTAAATGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRENDDLICFPVLEHSPVCLAES*FLLNAS Trigger: ACTTGCATTTAGAAGAAAGCAGCTTTCAGCAAGGCA...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 |
||
| CDS-3UTR GCA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTACTGGACTCTGTCCATaGCTTGCTGAAAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSTGLCP*LAESCF Trigger: AAAGCAGCTTTCAGCAAGGCATGGACAGAGTCCAGT...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 |
||
| 3UTR CAA 72 bp | GAGAGTTTTGCTGAGTATAGTAGCCTGGGCTGGCATTaGTATTCTCTTAGGGTATATATGACATCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFAEYSSLGWH*YSLRVYMTSVQ Trigger: CTGGACAGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTCAGCAAAACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGTTCCCTTTCTTGTCTTaGTTCTTCAGATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRENDDLICFPVLEHSPVFPFLS*FFRFPL Trigger: AAGAGGAAATCTGAAGAATCAAGACAAGAAAGGGAA...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 |
||
| CDS-3UTR TCA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTGGACCAGTTGACTTGTaGAAATCAATAATGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSGPVDL*KSIMRH Trigger: GTGCCGCATTATTGATTTTCACAAGTCAACTGGTCC...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGGCTACTATCTGGTACTaGTTATGTTTTAGATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WRENDDLICFPVLEHSPVATIWY*LCFRFP Trigger: GGGAAATCTAAAACATAAGCAGTACCAGATAGTAGC...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CCA 90 bp | TCAGTGAGGTCAGAAGTGTATAAATCTCACACGCTCCAATCCAGGCCTTTGTTCAATTTTTCCACAAAATaGACATTCGGGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVRSEVYKSHTLQSRPLFNFSTK*TFGRTV Trigger: TACAGTCCTCCCGAATGTCCATTTTGTGGAAAAATT...GAACAAAGGCCTGGATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCATAATGTTCGGTTTTGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLEKDIQDQILASIMFGFDAQAE*MPEVTS Trigger: GGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATC...AAAACCGAACATTATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTTGCCGCTGCAACTTCTaGAACTCTTCCCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCCRCNF*NSSLSC Trigger: ACAAGAAAGGGAAGAGTTTCAGAAGTTGCAGCGGCA...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTACCCAAAGGACCAGTTaGCTTGTGAAAATCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCTQRTS*LVKINN Trigger: ATTATTGATTTTCACAAGTCAACTGGTCCTTTGGGT...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | GAGTATAGTAGCCTGGGCTGGCATTTGTATTCTCTTAGGGTATATATGACATCTAAGAACACCCTCTACTaGTACTATCTGGTACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYSSLGWHLYSLRVYMTSKNTLY*YYLVLL Trigger: AAGCAGTACCAGATAGTAGCAGTAGAGGGTGTTCTT...AGATGTCATATATACCCTAAGAGAATACAAATGCCAGCCCAGGCTACTATACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CCA 90 bp | ACTTTACTCTCAGTGAGGTCAGAAGTGTATAAATCTCACACGCTCCAATCCAGGAATTTTTCCACAAAATaGACATTCGGGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLLSVRSEVYKSHTLQSRNFSTK*TFGRTV Trigger: TACAGTCCTCCCGAATGTCCATTTTGTGGAAAAATT...CCTGGATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGAGAGTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGAACCACCTCCGAGTTTGTTTGATTCTTTGTATAGTTCTTTCTGTTTCGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKEPPPSLFDSLYSSFCFDAQAE*MPEVTS Trigger: GGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATC...GAAACAGAAAGAACTATACAAAGAATCAAACAAACTCGGAGGTGGTTCTTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTTAACAGTTTCTGCATTTCTGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLRLLASISCFNSFCISDAQAE*MPEVTS Trigger: GGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATC...AGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGTAGTCTTAGACAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR GCA 90 bp | TTTAACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCTGCTTTCTTCTAAATaGAAGTCCACATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNSFCISREGHPGSNTSKLLSSK*KSTCSW Trigger: CCAGGAACATGTGGACTTGCATTTAGAAGAAAGCAG...CTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR GCA 90 bp | CTGAATTTTTGGAATACAAGGAACTGCCATACCTTTCAAGCAGTCACCATATACCTGCTTTCTTCTAAATaGAAGTCCACATGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFWNTRNCHTFQAVTIYLLSSK*KSTCSW Trigger: CCAGGAACATGTGGACTTGCATTTAGAAGAAAGCAG...GTATATGGTGACTGCTTGAAAGGTATGGCAGTTCCTTGTATTCCAAAAATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR GCA 90 bp | TACCTTTCAAGCAGTCACCATATACATCACTTTGCAATAATGATGAAAGTAGCAACTGGACTCTGTCCATaGCTTGCTGAAAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSSHHIHHFAIMMKVATGLCP*LAESCF Trigger: AAAGCAGCTTTCAGCAAGGCATGGACAGAGTCCAGT...TGCTACTTTCATCATTATTGCAAAGTGATGTATATGGTGACTGCTTGAAAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 |
||
| 3UTR CAA 72 bp | TCTATCTACTCCAGCTTGTTTCTTGGGACCATGTGCTaGGAAAAATGTTTCCCAACCTTTTACTCTAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIYSSLFLGTMC*EKCFPTFYSKV Trigger: TACCTTAGAGTAAAAGGTTGGGAAACATTTTTCCAAGCACATGGTCCCAAGAAACAAGCTGGAGTAGATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| CDS-3UTR CCA 90 bp | AAACTACTTCACCCAATACTTACAACTTTTTCCTCTGGGGAAAGAACACCCTCTAATTTTTCCACAAAATaGACATTCGGGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLLHPILTTFSSGERTPSNFSTK*TFGRTV Trigger: TACAGTCCTCCCGAATGTCCATTTTGTGGAAAAATT...AGAGGGTGTTCTTTCCCCAGAGGAAAAAGTTGTAAGTATTGGGTGAAGTAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTCACACCTTACATCTGTaGCAGTGTTCTGATAATACC | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCHTLHL*QCSDNT Trigger: GGTATTATCAGAACACTGCCACAGATGTAAGGTGTG...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTTACAACTTTTTCCTCTaGGGAAAGAACACCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCYNFFL*GKNTLY Trigger: GTAGAGGGTGTTCTTTCCCCAGAGGAAAAAGTTGTA...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| 3UTR CAA 72 bp | TTCCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTaGATGGGCTGGATTCATGTAAAGATACTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPPCAVVSLYYP*MGWIHVKILCK Trigger: TTTACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CAA 72 bp | CTTCATTCCATGCATCTTCAATCATGGACTGAATTTTaGGAATACAAGGAACTGCCATACCTTTCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHSMHLQSWTEF*EYKELPYLSSS Trigger: ACTGCTTGAAAGGTATGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGATTGAAGATGCATGGAATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTTCAGCTTTTCTGCTATaGAATTCAGATGGATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCSAFLL*NSDGCI Trigger: AATGCATCCATCTGAATTTCATAGCAGAAAAGCTGA...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTAAAACCTTCATTCCATaGATCTTCAATCATGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCKTFIP*IFNHGL Trigger: CAGTCCATGATTGAAGATGCATGGAATGAAGGTTTT...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTCTAGCCTCCATATCTTaGTTTAACAGTTTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCLASIS*FNSFCI Trigger: AATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAG...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTAATTTTTCCACAAAATaGACATTCGGGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCNFSTK*TFGRTV Trigger: TACAGTCCTCCCGAATGTCCATTTTGTGGAAAAATT...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTCATGGACTGAATTTTTaGAATACAAGGAACTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCHGLNF*NTRNCH Trigger: ATGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATG...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTACATGTCAGCTTTTCTaGTATGAAATTCAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLYYPLMGWIHVKILCTCQLF*YEIQMD Trigger: ATCCATCTGAATTTCATAGCAGAAAAGCTGACATGT...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| 3UTR CAA 72 bp | AAGGTGAAAATCTTCATTCACCTATTATGCTTAGGTTaGTTCTTTTCATTGTGTCCTGGATTTCCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KVKIFIHLLCLG*FFSLCPGFPEC Trigger: ACATTCAGGAAATCCAGGACACAATGAAAAGAACAAACCTAAGCATAATAGGTGAATGAAGATTTTCACCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| 3UTR CAA 72 bp | ATTGATTTCAACCCTGAGTTTAATTATTTGCTCGTCTaGGGTGAATTTGTTTCCTTTCGTTCTAGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDFNPEFNYLLV*GEFVSFRSRAF Trigger: AAAAGCTCTAGAACGAAAGGAAACAAATTCACCCAAGACGAGCAAATAATTAAACTCAGGGTTGAAATCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219457.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCCACAGATTTCCGAAGTaGTCTAAGACTACTAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSAQRTEDQLHLLDADVGHRFPK*SKTTSL Trigger: GAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTG...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCCGGGAGGACTGTATGTaGTTTCATAAATTGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSAQRTEDQLHLLDADVGREDCM*FHKLIL Trigger: AAGGATCAATTTATGAAACAACATACAGTCCTCCCG...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCGCAGAGGACTGAGGATCAGCTCCACCTCTTGGATGCAGATGTAGGCTCATGGACTGAATTTTaGGAATACAAGGAACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSAQRTEDQLHLLDADVGSWTEF*EYKELP Trigger: TGGCAGTTCCTTGTATTCCAAAAATTCAGTCCATGA...GCCTACATCTGCATCCAAGAGGTGGAGCTGATCCTCAGTCCTCTGCGCACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGGCTGTACTCTGCAGGTaGGTGTTCTTTCGGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WRENDDLICFPVLEHSPVAVLCR*VFFRSE Trigger: TTCAGACCGAAAGAACACCAACCTGCAGAGTACAGC...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTGCTGTACTCTGCAGGTaGGTGTTCTTTCGGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCAVLCR*VFFRSE Trigger: TTCAGACCGAAAGAACACCAACCTGCAGAGTACAGC...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTGACTCTGTCCATGCCTaGCTGAAAGCTGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCDSVHA*LKAAFF Trigger: GAAGAAAGCAGCTTTCAGCAAGGCATGGACAGAGTC...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACTCTCAGTGAGGTCAGAAGTGTATAAATCTCACACGCTCCAATCCAGGGACTCTGTCCATGCCTaGCTGAAAGCTGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLSVRSEVYKSHTLQSRDSVHA*LKAAFF Trigger: GAAGAAAGCAGCTTTCAGCAAGGCATGGACAGAGTC...CCTGGATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGAGAGTAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGATGTACACACGATCTTaGGAGTTCCTTCCGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WRENDDLICFPVLEHSPVMYTRS*EFLPSL Trigger: CAGAGACGGAAGGAACTCCAAAGATCGTGTGTACAT...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
||
| CDS TCA 90 bp | AGGCTTTCAGATGACTCTTTTGGAAAGCTAGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCCGCTGTACTCTGCAGGTTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSDDSFGKLDAQAE*MPEVTSAVLCRLVF Trigger: GAACACCAACCTGCAGAGTACAGCGGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATCTAGCTTTCCAAAAGAGTCATCTGAAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218222.2 ENSMUST00000218275.2 ENSMUST00000218880.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTTCAATATCCATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTTGGCTGTACTCTGCAGGTaGGTGTTCTTTCGGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSSISIQISEGVYPKDQLAVLCR*VFFRSE Trigger: TTCAGACCGAAAGAACACCAACCTGCAGAGTACAGC...CAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
||
| CDS-3UTR CAA 90 bp | TCGACTGTGACCCTGATGCTGGAGATAGATAGGAGGTTTAGATGTACACACGATTTAGGAAGTATCACCTaGCTGAAAGCTGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STVTLMLEIDRRFRCTHDLGSIT*LKAAFF Trigger: GAAGAAAGCAGCTTTCAGCAAGGTGATACTTCCTAA...ATCGTGTGTACATCTAAACCTCCTATCTATCTCCAGCATCAGGGTCACAGTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | CTGAATTTTTGGAATACAAGGAACTGCCATACCTTTCAAGCAGTCACCATATACGCTGTACTCTGCAGGTaGGTGTTCTTTCGGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LNFWNTRNCHTFQAVTIYAVLCR*VFFRSE Trigger: TTCAGACCGAAAGAACACCAACCTGCAGAGTACAGC...GTATATGGTGACTGCTTGAAAGGTATGGCAGTTCCTTGTATTCCAAAAATTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAGAAAATGATGATCTCATCTGTTTCCCAGTGTTAGAGCACTCCCCAGTGATGTTGTTTCATAAATaGATCCTTGGGCCTCAGACA | + |
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Preference number: 5 (lower is better) Translates to: WRENDDLICFPVLEHSPVMLFHK*ILGPQT Trigger: TGTCTGAGGCCCAAGGATCAATTTATGAAACAACAT...CACTGGGGAGTGCTCTAACACTGGGAAACAGATGAGATCATCATTTTCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTCGTAGCTGCTGTTGTTaGTATCCTCCAGAATTATCT | + |
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Preference number: 5 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCRSCCC*YPPELS Trigger: AGATAATTCTGGAGGATACAAACAACAGCAGCTACG...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCTTGTGCTGTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTCTCCAATCCAGGCCTTaGTTCCCTGTAATTTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: PSLCCSFPLLSFDGLDSCLQSRP*FPVICY Trigger: ATAACAAATTACAGGGAACAAAGGCCTGGATTGGAG...ACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTACAGCACAAGGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048222.6 |
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| CDS-3UTR CAA 90 bp | ACTTTACTCTCAGTGAGGTCAGAAGTGTATAAATCTCACACGCTCCAATCCAGGCGGGAGGACTGTATGTaGTTTCATAAATTGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: TLLSVRSEVYKSHTLQSRREDCM*FHKLIL Trigger: AAGGATCAATTTATGAAACAACATACAGTCCTCCCG...CCTGGATTGGAGCGTGTGAGATTTATACACTTCTGACCTCACTGAGAGTAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS GCA 90 bp | TTGCGAAGCTTGTTTCTAGCCTCCATATCTTGCTTTAACAGTTTCTaGATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LRSLFLASISCFNSF*ISREGHPGSNTSKH Trigger: ATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGTTAAAGCAAGATATGGAGGCTAGAAACAAGCTTCGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218880.2 |
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| CDS-3UTR CAA 90 bp | TACCTTTCAAGCAGTCACCATATACATCACTTTGCAATAATGATGAAAGTAGCAGACTCTGTCCATGCCTaGCTGAAAGCTGCTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YLSSSHHIHHFAIMMKVADSVHA*LKAAFF Trigger: GAAGAAAGCAGCTTTCAGCAAGGCATGGACAGAGTC...TGCTACTTTCATCATTATTGCAAAGTGATGTATATGGTGACTGCTTGAAAGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTTCTGCATTTCTCGAGAAGGACATCCAGGATCAAATACTAGCAAGCATAATGTTGTTTCATAAATaGATCCTTGGGCCTCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TVSAFLEKDIQDQILASIMLFHK*ILGPQT Trigger: TGTCTGAGGCCCAAGGATCAATTTATGAAACAACAT...TATGCTTGCTAGTATTTGATCCTGGATGTCCTTCTCGAGAAATGCAGAAACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | ATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTTGACTTGTGAAAATCAAATGTTGTTTCATAAATaGATCCTTGGGCCTCAGACA | + |
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Preference number: 5 (lower is better) Translates to: IQISEGVYPKDQLTCENQMLFHK*ILGPQT Trigger: TGTCTGAGGCCCAAGGATCAATTTATGAAACAACAT...TTGATTTTCACAAGTCAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTTGCTTCGGGAGGACTGTATGTaGTTTCATAAATTGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: ISHRFPKLSKTTSLHILLREDCM*FHKLIL Trigger: AAGGATCAATTTATGAAACAACATACAGTCCTCCCG...AAGCAAGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | TTTAGATTTCCCACAGATTTCCGAAGTTGTCTAAGACTACTAGCCTCCATATCTATGTTGTTTCATAAATaGATCCTTGGGCCTCAGACA | + |
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Preference number: 5 (lower is better) Translates to: FRFPTDFRSCLRLLASISMLFHK*ILGPQT Trigger: TGTCTGAGGCCCAAGGATCAATTTATGAAACAACAT...AGATATGGAGGCTAGTAGTCTTAGACAACTTCGGAAATCTGTGGGAAATCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS TCA 90 bp | TCAATACCAATAGCTATTGATTCCAACATGTCAGCTTTTCTGCTATaGAATTCAGATGGATGCATTCTTCCCCTATTTACTTCTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIPIAIDSNMSAFLL*NSDGCILPLFTSSS Trigger: GGAGCTAGAAGTAAATAGGGGAAGAATGCATCCATCTGAATTTCATAGCAGAAAAGCTGACATGTTGGAATCAATAGCTATTGGTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218880.2 |
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| CDS-3UTR CAA 90 bp | GCCATACCTTTCAAGCAGTCACCATATACATCACTTTGCAATAATGATGAAAGTCGGGAGGACTGTATGTaGTTTCATAAATTGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: AIPFKQSPYTSLCNNDESREDCM*FHKLIL Trigger: AAGGATCAATTTATGAAACAACATACAGTCCTCCCG...ACTTTCATCATTATTGCAAAGTGATGTATATGGTGACTGCTTGAAAGGTATGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000218275.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS-3UTR CAA 90 bp | GTAGTTTCCCTTTATTATCCTTTGATGGGCTGGATTCATGTAAAGATACTGTGTCTTTTCTCTGCTCTTTaGGTACTTTCTAGATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VVSLYYPLMGWIHVKILCLFSAL*VLSRFS Trigger: ACTGAATCTAGAAAGTACCAAAAGAGCAGAGAAAAG...ACACAGTATCTTTACATGAATCCAGCCCATCAAAGGATAATAAAGGGAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS TCA 72 bp | GATGACTCTTTTGGAAAGCTAGATGCACAAGCTGAATaGATGCCTGAAGTAACTTCCGCTGTACTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DDSFGKLDAQAE*MPEVTSAVLCR Trigger: CCTGCAGAGTACAGCGGAAGTTACTTCAGGCATTCATTCAGCTTGTGCATCTAGCTTTCCAAAAGAGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218222.2 ENSMUST00000218275.2 ENSMUST00000218880.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS CAA 72 bp | ATATTTGGGTCAAGGAATCTTCTCCGCTGTAAACACTaGCGAAGCTTGTTTCTAGCCTCCATATCTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: IFGSRNLLRCKH*RSLFLASISCF Trigger: AAAGCAAGATATGGAGGCTAGAAACAAGCTTCGCAAGTGTTTACAGCGGAGAAGATTCCTTGACCCAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218880.2 |
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| CDS CAA 90 bp | TTTCTTCTAAATGCAAGTCCACATGTTCCTGGAGAATATGGTAATTaGTACAGACAAGCCCACACATGGGACAGTCATAGAGTGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FLLNASPHVPGEYGN*YRQAHTWDSHRVVD Trigger: ATCAACCACTCTATGACTGTCCCATGTGTGGGCTTGTCTGTACAAATTACCATATTCTCCAGGAACATGTGGACTTGCATTTAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218275.2 ENSMUST00000218880.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS CAA 72 bp | TTTTTCCACAAAATGGACATTCGGGAGGACTGTATGTaGTTTCATAAATTGATCCTTGGGCCTCAGACAATC | + |
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Preference number: 6 (lower is better) Translates to: FFHKMDIREDCM*FHKLILGPQTI Trigger: GATTGTCTGAGGCCCAAGGATCAATTTATGAAACAACATACAGTCCTCCCGAATGTCCATTTTGTGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218275.2 ENSMUST00000218880.2 ENSMUST00000219457.2 ENSMUST00000219878.2 |
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| CDS CAA 72 bp | TTTACTTCTAGCTCCATATGTCGTAGCTGCTGTTGTTaGTATCCTCCAGAATTATCTAAACCATATTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: FTSSSICRSCCC*YPPELSKPYCR Trigger: GCGGCAATATGGTTTAGATAATTCTGGAGGATACAAACAACAGCAGCTACGACATATGGAGCTAGAAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218880.2 |
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| CDS CAA 90 bp | ATCATGAAAATATTTGGGTCAAGGAATCTTCTCCGCTGTAAACACTaGCGAAGCTTGTTTCTAGCCTCCATATCTTGCTTTAACAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: IMKIFGSRNLLRCKH*RSLFLASISCFNSF Trigger: GAAACTGTTAAAGCAAGATATGGAGGCTAGAAACAAGCTTCGCAAGTGTTTACAGCGGAGAAGATTCCTTGACCCAAATATTTTCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218880.2 |
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| CDS TCA 72 bp | ATAGCTATTGATTCCAACATGTCAGCTTTTCTGCTATaGAATTCAGATGGATGCATTCTTCCCCTATTTACT | + |
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Preference number: 6 (lower is better) Translates to: IAIDSNMSAFLL*NSDGCILPLFT Trigger: AGTAAATAGGGGAAGAATGCATCCATCTGAATTTCATAGCAGAAAAGCTGACATGTTGGAATCAATAGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048222.6 ENSMUST00000218055.2 ENSMUST00000218880.2 |
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