Pregenerated sensors for ZSWIM9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070814Ensembl transcript IDs: ENSMUST00000108532.11, ENSMUST00000119139.10, ENSMUST00000119558.9, ENSMUST00000144470.2
Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGTAGGCTAGGCGTGCCGGGACGCGCCACGCAACAGGCAGCCTaGCGCGCACGTCCAGCGCTGTCCACACACAGTACTGCCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: LSRLGVPGRATQQAA*RARPALSTHSTAIR Trigger: CCTGATGGCAGTACTGTGTGTGGACAGCGCTGGACGTGCGCGCCAGGCTGCCTGTTGCGTGGCGCGTCCCGGCACGCCTAGCCTACTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | GGTCCAGGGTGCCCTGCAACCCAGGTAGCCGGTCCACCAATAGGATaGGTGGGAAGCGCCGCAGCAGCGCCCTGGTGCGCGATGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: GPGCPATQVAGPPIG*VGSAAAAPWCAMLE Trigger: TTCTAACATCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACCGGCTACCTGGGTTGCAGGGCACCCTGGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | AGCGCGACAGATCTGCACACGTGCACACGGCAACAGCTGGCGAACTaGACGCAGTTGTCCGGCCACCTCTGGTCCAGCTGTGAGGCAGCG | + |
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Preference number: 1 (lower is better) Translates to: SATDLHTCTRQQLAN*TQLSGHLWSSCEAA Trigger: CGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAACTGCGTGCAGTTCGCCAGCTGTTGCCGTGTGCACGTGTGCAGATCTGTCGCGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | CCTGCGATGGCTGCGCACAAGAGCACAGGCATCCAGGTCACGGGTTaGTTCGTAGGCACGGAAACGTACCCACATGTCGTGGCGGGGCGC | + |
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Preference number: 1 (lower is better) Translates to: PAMAAHKSTGIQVTG*FVGTETYPHVVAGR Trigger: GCGCCCCGCCACGACATGTGGGTACGTTTCCGTGCCTACGAAGCAACCCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGCCATCGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | ACACGGCAACAGCTGGCGAACTGCACGCAGTTGTCCGGCCACCTCTaGTCCAGCTGTGAGGCAGCGCACTCGGCCTTTGACATCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TRQQLANCTQLSGHL*SSCEAAHSAFDIRS Trigger: GCTCCTGATGTCAAAGGCCGAGTGCGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAACTGCGTGCAGTTCGCCAGCTGTTGCCGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | CACGTCCAGCGCTGTCCACACACAGTACTGCCATCAGGTCCAGGGTaGCCTGCAACCCAGGTAGCCGGTCCACCAATAGGATGCGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: HVQRCPHTVLPSGPG*PATQVAGPPIGCVG Trigger: TCCCACGCATCCTATTGGTGGACCGGCTACCTGGGTTGCAGGGCACCCTGGACCTGATGGCAGTACTGTGTGTGGACAGCGCTGGACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | GGTCCGGATCCTCCTGGCTGGCACCACCCAACTCCTGTGCCTTACTaGAGAGCGTCTCTAGACCCTGAGCGCGACAGATCTGCACACGTG | + |
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Preference number: 1 (lower is better) Translates to: GPDPPGWHHPTPVPY*RASLDPERDRSAHV Trigger: CACGTGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGTGCCAGCCAGGAGGATCCGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | GAATCTGCTAGGCGGCAGAGGAGTGGCCACAGGTCCGGATCCTCCTaGCTGGCACCACCCAACTCCTGTGCCTTACTGAAGAGCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ESARRQRSGHRSGSS*LAPPNSCALLKSVS Trigger: AGAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGTGCCAGCCAGGAGGATCCGGACCTGTGGCCACTCCTCTGCCGCCTAGCAGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | GCACCACCCAACTCCTGTGCCTTACTGAAGAGCGTCTCTAGACCCTaGGCGCGACAGATCTGCACACGTGCACACGGCAACAGCTGGCGA | + |
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Preference number: 1 (lower is better) Translates to: APPNSCALLKSVSRP*ARQICTRAHGNSWR Trigger: TCGCCAGCTGTTGCCGTGTGCACGTGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | CCAGCTGTGAGGCAGCGCACTCGGCCTTTGACATCAGGAGCGCTTTaGAGCAGGGAAACCAGCATGAATCTCAGTAGGCTAGGCGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: PAVRQRTRPLTSGAL*SRETSMNLSRLGVP Trigger: CGGCACGCCTAGCCTACTGAGATTCATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTCAAAGGCCGAGTGCGCTGCCTCACAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | GCTACACTATGTGAGGGGCTGAGGCGTCTTAAGAGTCGCCTGCGATaGCTGCGCACAAGAGCACAGGCATCCAGGTCACGGGTTGCTTCG | + |
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Preference number: 1 (lower is better) Translates to: ATLCEGLRRLKSRLR*LRTRAQASRSRVAS Trigger: CGAAGCAACCCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGCCATCGCAGGCGACTCTTAAGACGCCTCAGCCCCTCACATAGTGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | TGGCCACTAGGTCACGAAGGCACTGAGCTACACTATGTGAGGGGCTaGGGCGTCTTAAGAGTCGCCTGCGATGGCTGCGCACAAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: WPLGHEGTELHYVRG*GVLRVACDGCAQEH Trigger: GTGCTCTTGTGCGCAGCCATCGCAGGCGACTCTTAAGACGCCTCAGCCCCTCACATAGTGTAGCTCAGTGCCTTCGTGACCTAGTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | AGGGCAAAGCCAGCTCCGGTCCAGTGGAAACCTCGGGTCCCATGTTaGCTAGCGAAGGCTAGCTCCTCTGCCACTAGATCTGCCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: RAKPAPVQWKPRVPC*LAKASSSATRSANS Trigger: AGAGTTGGCAGATCTAGTGGCAGAGGAGCTAGCCTTCGCTAGGCAACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGGCTTTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | GCCGGTCCACCAATAGGATGCGTGGGAAGCGCCGCAGCAGCGCCCTaGTGCGCGATGTTAGAAGGAACACAGTCTCTACCATTGCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: AGPPIGCVGSAAAAP*CAMLEGTQSLPLLD Trigger: ATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | CTGCCACTAGATCTGCCAACTCTGGCCCACAGGCTGCTCGGAACTTaGCTAGTAGCTCACAGTCCACTCCCTCATCTCTACAGGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: LPLDLPTLAHRLLGT*LVAHSPLPHLYRGG Trigger: GCCTCCCCTGTAGAGATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAGAGTTGGCAGATCTAGTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | TCCATGTGGAGGGCAGCAAGCAGGGGTACACAGGGTCAGGGCTCCTaGGATCTTCCCCAGCAATCTCTGAGCAGGTCCATGTGGAACAAG | + |
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Preference number: 1 (lower is better) Translates to: SMWRAASRGTQGQGS*DLPQQSLSRSMWNK Trigger: CTTGTTCCACATGGACCTGCTCAGAGATTGCTGGGGAAGATCTCAGGAGCCCTGACCCTGTGTACCCCTGCTTGCTGCCCTCCACATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | GGTCCACCAATAGGATGCGTGGGAAGCGCCGCAGCAGCGCCCTGGTaGGCGATGTTAGAAGGAACACAGTCTCTACCATTGCTTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: GPPIGCVGSAAAAPW*AMLEGTQSLPLLDP Trigger: AGGATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | AAGTCTCTTTGGTTCCCCTGGGCCTTCTTCACTTCCTCCCTGTACTaGCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTC | + |
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Preference number: 1 (lower is better) Translates to: KSLWFPWAFFTSSLY*LPCSQGLNPVHCPF Trigger: GAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAGGGAGGAAGTGAAGAAGGCCCAGGGGAACCAAAGAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | GTGGCGGGGCGCCCAGTTGTGCTCAAAATATCTGATGAAAGCAGTTaGAGCCTGGGAACGCAACTCAGCCAGCGCCTCGCTGTAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: VAGRPVVLKISDESS*SLGTQLSQRLAVSS Trigger: ACTGCTTACAGCGAGGCGCTGGCTGAGTTGCGTTCCCAGGCTCCAACTGCTTTCATCAGATATTTTGAGCACAACTGGGCGCCCCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | AAGTCTGAGGTGCCATCCTTAAGGGCAAAGCCAGCTCCGGTCCAGTaGAAACCTCGGGTCCCATGTTGCCTAGCGAAGGCTAGCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: KSEVPSLRAKPAPVQ*KPRVPCCLAKASSS Trigger: AGAGGAGCTAGCCTTCGCTAGGCAACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGGCTTTGCCCTTAAGGATGGCACCTCAGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | CCAGTTGCATCTGCCCATTGCATGGCCACTAGGTCACGAAGGCACTaGGCTACACTATGTGAGGGGCTGAGGCGTCTTAAGAGTCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PVASAHCMATRSRRH*ATLCEGLRRLKSRL Trigger: CAGGCGACTCTTAAGACGCCTCAGCCCCTCACATAGTGTAGCTCAGTGCCTTCGTGACCTAGTGGCCATGCAATGGGCAGATGCAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | TCCCTGTACTGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTaGCCATTCTGGATTGCCTTTCAACACAGTTTGCACAGGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SLYCLPCSQGLNPVH*PFWIAFQHSLHRGG Trigger: ACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | TGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTaGATTGCCTTTCAACACAGTTTGCACAGGGGTGGTGCATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: CLPCSQGLNPVHCPF*IAFQHSLHRGGAWY Trigger: GTACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | CCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGATTaGCTTTCAACACAGTTTGCACAGGGGTGGTGCATGGTACACCAT | + |
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Preference number: 1 (lower is better) Translates to: PLQPGTQPCSLPILD*LSTQFAQGWCMVHH Trigger: ATGGTGTACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | GACTCTTGGCATTCTCAGACTCAACCAGGTTGCCTCTCCGATCTATaGGCCCCAGCACCCTTACCCTATTCTCTATCTGGGTTCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: DSWHSQTQPGCLSDL*APAPLPYSLSGFPS Trigger: GGAGGGGAACCCAGATAGAGAATAGGGTAAGGGTGCTGGGGCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGAGAATGCCAAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | CCCCTTCTCTATTTCAAACGGAGGCTCTTTCCAGTCTTGAGGTTTTaGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTCTCTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PLLYFKRRLFPVLRF*CTCPLLLQLYVSPG Trigger: CCCTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATAGAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | CCCCATAGCTTAGCTTCTTTCCATGACCTCCTCTGTGCATCCCCCTaGTCCAGCTCTATCCCTTTCTTGGCTGACCCTGTCTCTCATAAC | + |
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Preference number: 1 (lower is better) Translates to: PHSLASFHDLLCASP*SSSIPFLADPVSHN Trigger: GTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAGAAGCTAAGCTATGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | AGGGCCTTCCTTCAAGACTCTTGGCATTCTCAGACTCAACCAGGTTaGCTCTCCGATCTATGGGCCCCAGCACCCTTACCCTATTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: RAFLQDSWHSQTQPG*LSDLWAPAPLPYSL Trigger: TAGAGAATAGGGTAAGGGTGCTGGGGCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGAGAATGCCAAGAGTCTTGAAGGAAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR TCA 90 bp | ACGTCGATCCCCTTCTCTATTTCAAACGGAGGCTCTTTCCAGTCTTaGGGTTTTGGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTCT | + |
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Preference number: 1 (lower is better) Translates to: TSIPFSISNGGSFQS*GFGARALSSCNCTS Trigger: AGACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATAGAGAAGGGGATCGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR GCA 90 bp | TCAACCCTGTTCACTGCCCATTCTGGATTGCCTTTCAACACAGTTTaGACAGGGGTGGTGCATGGTACACCATTCCCCATCCCTAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: STLFTAHSGLPFNTV*TGVVHGTPFPIPRS Trigger: GCTTCTAGGGATGGGGAATGGTGTACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CCA 90 bp | CGTTTCCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTaGCCATTAGCACTTCCCCAGGTGTGGCTCCAGGATCTCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: RFLIYFPGQCPFDMS*PLALPQVWLQDLRD Trigger: ATCTCTGAGATCCTGGAGCCACACCTGGGGAAGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTGGCCACAGGTCCGGATCCTCCTGGCTGGCACCACCCAACTCCTGTGCCTTGTCCGGCCACCTCTaGTCCAGCTGTGAGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: RSGHRSGSSWLAPPNSCALSGHL*SSCEAA Trigger: CGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAA...GGCACAGGAGTTGGGTGGTGCCAGCCAGGAGGATCCGGACCTGTGGCCACTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CAA 90 bp | GCCTGCGATGGCTGCGCACAAGAGCACAGGCATCCAGGTCACGGGTaGCTTCGTAGGCACGGAAACGTACCCACATGTCGTGGCGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: ACDGCAQEHRHPGHG*LRRHGNVPTCRGGA Trigger: CGCCCCGCCACGACATGTGGGTACGTTTCCGTGCCTACGAAGCAACCCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGCCATCGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCGCCATTAACACCCTCTaGGGCTGCCTCTCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SEAVCRLSHQRAISPAPPAINTL*GCLSSC Trigger: GCAACTGGAGAGGCAGCCTCAGAGGGTGTTAATGGC...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR GCA 90 bp | GACTATGTTCTTGCCCTCCATGTGGAGGGCAGCAAGCAGGGGTACACAGGGTCAAGGTCCAGGGTGCCCTaGAACCCAGGTAGCCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: DYVLALHVEGSKQGYTGSRSRVP*NPGSRS Trigger: GGACCGGCTACCTGGGTTGCAGGGCACCCTGGACCT...TGACCCTGTGTACCCCTGCTTGCTGCCCTCCACATGGAGGGCAAGAACATAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACTTCTTGCCCTCCATGTaGAGGGCAGCAAGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLRQYAGCPTREPSPPHHFLPSM*RAASRG Trigger: ACCCCTGCTTGCTGCCCTCCACATGGAGGGCAAGAA...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCCACAGGCTGCTCGGAACTTGGCTAGTAGCTCACAGTCCACTCCCTCATGCCGCAGCAGCGCCCTaGTGCGCGATGTTAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LAHRLLGTWLVAHSPLPHAAAAP*CAMLEG Trigger: TCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGC...ATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CAA 90 bp | TGTCCGGCCACCTCTGGTCCAGCTGTGAGGCAGCGCACTCGGCCTTaGACATCAGGAGCGCTTTGCAGCAGGGAAACCAGCATGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: CPATSGPAVRQRTRP*TSGALCSRETSMNL Trigger: GAGATTCATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTCAAAGGCCGAGTGCGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCCTCTGTGCATCCCCCTaGTCCAGCTCTATCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SEAVCRLSHQRAISPAPPLCASP*SSSIPF Trigger: GAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAG...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCCCCTCTCTCCTTCCATaGTTCACTTCCCCAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SEAVCRLSHQRAISPAPPPSLLP*FTSPAL Trigger: TAGGGCTGGGGAAGTGAAGCATGGAAGGAGAGAGGG...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGCGTCTCTAGACCCTGAGCGCGACAGATCTGCACACGTGCACACGGCAACAGGTCCACCAATAGGATaGGTGGGAAGCGCCGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RASLDPERDRSAHVHTATGPPIG*VGSAAA Trigger: TGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACC...TGTTGCCGTGTGCACGTGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCCAGCTGTGAGGCAGCGCACTCGGCCTTTGACATCAGGAGCGCTTTGCAGCGTCTCTACCATTGCTTaGTCCTCCACGAACACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GPAVRQRTRPLTSGALCSVSTIA*SSTNTS Trigger: GCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGAC...GCTGCAAAGCGCTCCTGATGTCAAAGGCCGAGTGCGCTGCCTCACAGCTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR GCA 90 bp | TGTACTGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGAGCAGCAGCGCCCTGGTaGGCGATGTTAGAAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: CTASPAARDSTLFTAHSGAAAPW*AMLEGT Trigger: TGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGC...TCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR CAA 90 bp | TCTGCCACTAGATCTGCCAACTCTGGCCCACAGGCTGCTCGGAACTaGGCTAGTAGCTCACAGTCCACTCCCTCATCTCTACAGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SATRSANSGPQAARN*ASSSQSTPSSLQGR Trigger: CCTCCCCTGTAGAGATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAGAGTTGGCAGATCTAGTGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR TCA 90 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTGGGGTCCCCTGCCATCTCCCTCAGCTCCCCTCTaGTCTCCGTTCTTGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: STCCPPFLKLTGWGPLPSPSAPL*SPFLGT Trigger: AGTCCCCAAGAACGGAGATCAGAGGGGAGCTGAGGG...AGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGAACTCCTGTGCCTTACTaGAGAGCGTCTCTAGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: CTASPAARDSTLFTAHSGTPVPY*RASLDP Trigger: AGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGT...TCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGACCCCTCACCTTCTGATTCTCCAACCAGACTCCTTGACCATCTCTCAAGTGGCCTTCCACAGTGGCTaGTCTCTGTGCCCCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TTPHLLILQPDSLTISQVAFHSG*SLCPSP Trigger: AGGGGAGGGGCACAGAGACCAGCCACTGTGGAAGGC...CACTTGAGAGATGGTCAAGGAGTCTGGTTGGAGAATCAGAAGGTGAGGGGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCCCAGTCTCTGACCTCTaGCTCTCTCAAAAGCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SEAVCRLSHQRAISPAPPPVSDL*LSQKLF Trigger: AAAGAGCTTTTGAGAGAGCCAGAGGTCAGAGACTGG...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTATGTTCTTGCCCTCCATGTGGAGGGCAGCAAGCAGGGGTACACAGGGTCACCAGTCTTGAGGTTTTaGTGCACGTGCCCTCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: DYVLALHVEGSKQGYTGSPVLRF*CTCPLL Trigger: GAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGG...TGACCCTGTGTACCCCTGCTTGCTGCCCTCCACATGGAGGGCAAGAACATAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | TCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGATaGCCTTTCAACACAGTTTGCACAGGGGTGGTGCATGGTACACCA | + |
|
Preference number: 2 (lower is better) Translates to: SPAARDSTLFTAHSG*PFNTVCTGVVHGTP Trigger: TGGTGTACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCTTAGCTTCTTTCCATaGCCTCCTCTGTGCATCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSEAVCRLSHQRAISLSFFP*PPLCIP Trigger: GGGGATGCACAGAGGAGGTCATGGAAAGAAGCTAAG...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTGGGGTCCCCTGCCATCTCGACCCCTCACCTTCTaGTTCTCCAACCAGACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: STCCPPFLKLTGWGPLPSRPLTF*FSNQTP Trigger: AGGAGTCTGGTTGGAGAATCAGAAGGTGAGGGGTCG...AGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTGGGGTCCCCTGCCATCTAGTGGCTGGTCTCTGTaGCCCTCCCCTTCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: STCCPPFLKLTGWGPLPSSGWSL*PSPSLS Trigger: AGAAAGAGAAGGGGAGGGGCACAGAGACCAGCCACT...AGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | TGTCCCTTCACGACCCCTCACCTTCTGATTCTCCAACCAGACTCCTaGACCATCTCTCAAGTGCAGTCGCCTCCCTTTCTCACTCTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: CPFTTPHLLILQPDS*TISQVQSPPFLTLS Trigger: CGAGAGAGTGAGAAAGGGAGGCGACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGAGAATCAGAAGGTGAGGGGTCGTGAAGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | CAGGGCCTTCCTTCAAGACTCTTGGCATTCTCAGACTCAACCAGGTaGCCTCTCCGATCTATGGGCCCCAGCACCCTTACCCTATTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QGLPSRLLAFSDSTR*PLRSMGPSTLTLFS Trigger: AGAGAATAGGGTAAGGGTGCTGGGGCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGAGAATGCCAAGAGTCTTGAAGGAAGGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | TCCCCTTCTCTATTTCAAACGGAGGCTCTTTCCAGTCTTGAGGTTTaGGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTCTCTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSLFQTEALSSLEV*VHVPSPPATVRLSR Trigger: CCTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATAGAGAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACTTTGCTCATTCTTCCTaGCTTTTCCCATTTCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: PLRQYAGCPTREPSPPHHFAHSS*LFPFQP Trigger: AGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAA...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | AACGTCGATCCCCTTCTCTATTTCAAACGGAGGCTCTTTCCAGTCTaGAGGTTTTGGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTC | + |
|
Preference number: 2 (lower is better) Translates to: NVDPLLYFKRRLFPV*RFWCTCPLLLQLYV Trigger: GACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATAGAGAAGGGGATCGACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTTCTTGCCCTCCATGTaGAGGGCAGCAAGCAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPFLPSM*RAASRG Trigger: ACCCCTGCTTGCTGCCCTCCACATGGAGGGCAAGAA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTCTCTCCAGGGCCTTCCTTCTTTGCTCATTCTTCCTaGCTTTTCCCATTTCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: WCTCPLLLQLYVSPGPSFFAHSS*LFPFQP Trigger: AGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAA...GAAGGAAGGCCCTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGATTCCTTCAAGACTCTTaGCATTCTCAGACTCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: CTASPAARDSTLFTAHSGFLQDS*HSQTQP Trigger: TGGTTGAGTCTGAGAATGCCAAGAGTCTTGAAGGAA...TCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTGGGGTCCCCTGCCATCTCTTGCGTCCTCTAAATaGACAACAACAATGTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: STCCPPFLKLTGWGPLPSLASSK*TTTMSS Trigger: GGAGGACATTGTTGTTGTTCATTTAGAGGACGCAAG...AGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCCACAGGCTGCTCGGAACTTGGCTAGTAGCTCACAGTCCACTCCCTCATTCCTTTCTCCAGTTTTaGTCATTCTTCCTGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LAHRLLGTWLVAHSPLPHSFLQF*SFFLAF Trigger: AAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGA...ATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTGTACTGCCTCCCCTaGAGCCAGGGACTCAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PPILSPVLLILPGFSHFNLYCLP*SQGLNP Trigger: AGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | AACTCACAGGTTGGGGTCCCCTGCCATCTCCATTTACTATGCCTGTaGCTCTTGCGTCCTCTAAATGAACAACAACAATGTCCTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NSQVGVPCHLHLLCL*LLRPLNEQQQCPPG Trigger: GCCTGGAGGACATTGTTGTTGTTCATTTAGAGGACGCAAGAGCAACAGGCATAGTAAATGGAGATGGCAGGGGACCCCAACCTGTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACAGCGTCTCTAGACCCTaGGCGCGACAGATCTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: PPILSPVLLILPGFSHFNSVSRP*ARQICT Trigger: TGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCT...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCTCCTTTCTCCAGTTTTaGTCATTCTTCCTGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSLPSEAVCRLSHQRAISSFLQF*SFFLAF Trigger: AAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGA...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCACATCAGGAGCGCTTTaGAGCAGGGAAACCAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPTSGAL*SRETSM Trigger: CATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACGGCTCTTTCCAGTCTTaGGGTTTTGGTGCACGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PPILSPVLLILPGFSHFNGSFQS*GFGARA Trigger: GGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCC...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTCTGTGCATCCCCCTaGTCCAGCTCTATCCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PPILSPVLLILPGFSHFNLCASP*SSSIPF Trigger: GAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGCACTTCCCCAGGTGTaGCTCCAGGATCTCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VLLILPGFSHFNLVVSRAALPQV*LQDLRD Trigger: ATCTCTGAGATCCTGGAGCCACACCTGGGGAAGTGC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| 3UTR-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAGCACTTCCCCAGGTGTaGCTCCAGGATCTCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSLSWLTLSLITSSFPHLALPQV*LQDLRD Trigger: ATCTCTGAGATCCTGGAGCCACACCTGGGGAAGTGC...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTTTCCCCAGCAATCTCTaGGCAGGTCCATGTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: PHLFSRAMSFRYVLAISTFPSNL*AGPCGT Trigger: TGTTCCACATGGACCTGCTCAGAGATTGCTGGGGAA...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR GCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGCTCTGTGCATCCCCCTaGTCCAGCTCTATCCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSFLQFCSFFLAFPISTLLCASP*SSSIPF Trigger: GAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAG...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCAGTTTGCACAGGGGTaGTGCATGGTACACCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: PHLFSRAMSFRYVLAISTQFAQG*CMVHHS Trigger: GGAATGGTGTACCATGCACCACCCCTGTGCAAACTG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 90 bp | TTCCCCAGCCCTATCTCTTGTCTCCCTCCTATCCTTTCTCCAGTTTaGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FPSPISCLPPILSPV*LILPGFSHFNLVVS Trigger: AGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAGAGATAGGGCTGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAGCTCTATCCCTTTCTTaGCTGACCCTGTCTCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSWLTLSLITSSFPHLALSLS*LTLSLI Trigger: TATGAGAGACAGGGTCAGCCAAGAAAGGGATAGAGC...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | TGCCCTGCAACCCAGGTAGCCGGTCCACCAATAGGATaGGTGGGAAGCGCCGCAGCAGCGCCCTGGTGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: CPATQVAGPPIG*VGSAAAAPWCA Trigger: CGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACCGGCTACCTGGGTTGCAGGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CTAGGCGTGCCGGGACGCGCCACGCAACAGGCAGCCTaGCGCGCACGTCCAGCGCTGTCCACACACAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LGVPGRATQQAA*RARPALSTHST Trigger: AGTACTGTGTGTGGACAGCGCTGGACGTGCGCGCCAGGCTGCCTGTTGCGTGGCGCGTCCCGGCACGCCTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CAGCTGGCGAACTGCACGCAGTTGTCCGGCCACCTCTaGTCCAGCTGTGAGGCAGCGCACTCGGCCTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLANCTQLSGHL*SSCEAAHSAFD Trigger: GTCAAAGGCCGAGTGCGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAACTGCGTGCAGTTCGCCAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | GCGCGACAGATCTGCACACGTGCACACGGCAACAGCTaGCGAACTGCACGCAGTTGTCCGGCCACCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ARQICTRAHGNS*RTARSCPATSG Trigger: ACCAGAGGTGGCCGGACAACTGCGTGCAGTTCGCCAGCTGTTGCCGTGTGCACGTGTGCAGATCTGTCGCGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | GATCTGCACACGTGCACACGGCAACAGCTGGCGAACTaGACGCAGTTGTCCGGCCACCTCTGGTCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLHTCTRQQLAN*TQLSGHLWSSC Trigger: ACAGCTGGACCAGAGGTGGCCGGACAACTGCGTGCAGTTCGCCAGCTGTTGCCGTGTGCACGTGTGCAGATC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | TGTGAGGGGCTGAGGCGTCTTAAGAGTCGCCTGCGATaGCTGCGCACAAGAGCACAGGCATCCAGGTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: CEGLRRLKSRLR*LRTRAQASRSR Trigger: CCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGCCATCGCAGGCGACTCTTAAGACGCCTCAGCCCCTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | CGCTGTCCACACACAGTACTGCCATCAGGTCCAGGGTaGCCTGCAACCCAGGTAGCCGGTCCACCAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RCPHTVLPSGPG*PATQVAGPPIG Trigger: TCCTATTGGTGGACCGGCTACCTGGGTTGCAGGGCACCCTGGACCTGATGGCAGTACTGTGTGTGGACAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | TGGTTCCCCTGGGCCTTCTTCACTTCCTCCCTGTACTaGCTCCCCTGCAGCCAGGGACTCAACCCTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WFPWAFFTSSLY*LPCSQGLNPVH Trigger: GTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAGGGAGGAAGTGAAGAAGGCCCAGGGGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGTGGCCACAGGTCCGGATCCTCCTGGCTGGCACCACCCAACTCCTGTGCCAGTCTCTACCATTGCTaGATCCTCCACGAACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSGHRSGSSWLAPPNSCASLYHC*ILHEHQ Trigger: CTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACT...GGCACAGGAGTTGGGTGGTGCCAGCCAGGAGGATCCGGACCTGTGGCCACTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | CCTCCTGGCTGGCACCACCCAACTCCTGTGCCTTACTaGAGAGCGTCTCTAGACCCTGAGCGCGACAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PPGWHHPTPVPY*RASLDPERDRS Trigger: AGATCTGTCGCGCTCAGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGTGCCAGCCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | GGTCACGAAGGCACTGAGCTACACTATGTGAGGGGCTaGGGCGTCTTAAGAGTCGCCTGCGATGGCTGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: GHEGTELHYVRG*GVLRVACDGCA Trigger: TGCGCAGCCATCGCAGGCGACTCTTAAGACGCCTCAGCCCCTCACATAGTGTAGCTCAGTGCCTTCGTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | CTCAAGTGCAGTCGCCTCCCTTTCTCACTCTCTCGATaGGGCCTTCCACAGTGGCTGGTCTCTGTGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LKCSRLPFSLSR*GLPQWLVSVPL Trigger: GAGGGGCACAGAGACCAGCCACTGTGGAAGGCCTCATCGAGAGAGTGAGAAAGGGAGGCGACTGCACTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | AGGGCAGCAAGCAGGGGTACACAGGGTCAGGGCTCCTaGGATCTTCCCCAGCAATCTCTGAGCAGGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RAASRGTQGQGS*DLPQQSLSRSM Trigger: CATGGACCTGCTCAGAGATTGCTGGGGAAGATCTCAGGAGCCCTGACCCTGTGTACCCCTGCTTGCTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | GCTGCGCACAAGAGCACAGGCATCCAGGTCACGGGTTaGTTCGTAGGCACGGAAACGTACCCACATGTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: AAHKSTGIQVTG*FVGTETYPHVV Trigger: CACGACATGTGGGTACGTTTCCGTGCCTACGAAGCAACCCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | CCAGCTCCGGTCCAGTGGAAACCTCGGGTCCCATGTTaGCTAGCGAAGGCTAGCTCCTCTGCCACTAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PAPVQWKPRVPC*LAKASSSATRS Trigger: AGATCTAGTGGCAGAGGAGCTAGCCTTCGCTAGGCAACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CCAATAGGATGCGTGGGAAGCGCCGCAGCAGCGCCCTaGTGCGCGATGTTAGAAGGAACACAGTCTCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: PIGCVGSAAAAP*CAMLEGTQSLP Trigger: TGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | GTGCCATCCTTAAGGGCAAAGCCAGCTCCGGTCCAGTaGAAACCTCGGGTCCCATGTTGCCTAGCGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPSLRAKPAPVQ*KPRVPCCLAKA Trigger: AGCCTTCGCTAGGCAACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGGCTTTGCCCTTAAGGATGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCGAGGCAGTATGCAGGTaGTCCCACCAGAGAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSLPSEAVCRLSHQRAISEAVCR*SHQRAI Trigger: GATGGCTCTCTGGTGGGACAACCTGCATACTGCCTC...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTGCCTCCCCTGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGATCAGACTCAACCAGGTaGCCTCTCCGATCTATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CTASPAARDSTLFTAHSGSDSTR*PLRSMG Trigger: GCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGA...TCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | TTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCTaGGAAATGGCCAACTCCCCAGGTCATCCTATCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSHQRAISPAPP*EMANSPGHPII Trigger: GATGATAGGATGACCTGGGGAGTTGGCCATTTCTCAGGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | ATAGGATGCGTGGGAAGCGCCGCAGCAGCGCCCTGGTaGGCGATGTTAGAAGGAACACAGTCTCTACCATTG | + |
|
Preference number: 3 (lower is better) Translates to: IGCVGSAAAAPW*AMLEGTQSLPL Trigger: CAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCACGCATCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | CGGAGGCTCTTTCCAGTCTTGAGGTTTTGGTGCACGTaGCCTCTCCTCCTGCAACTGTACGTCTCTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RRLFPVLRFWCT*PLLLQLYVSPG Trigger: CCCTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | GACGTGCAGCAAAGAGGTGTCTGCAGGGCAGGCATCTaGCAGCATAGATTGAGCAGCTGCAGTGTGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DVQQRGVCRAGI*QHRLSSCSVSG Trigger: CCCTGACACACTGCAGCTGCTCAATCTATGCTGCCAGATGCCTGCCCTGCAGACACCTCTTTGCTGCACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCCAGCCCTATCTCTaGTCTCCCTCCTATCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLPSEAVCRLSHQRAISPQPYL*SPSYPF Trigger: GAAAGGATAGGAGGGAGACAAGAGATAGGGCTGGGG...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | AACTCCTGTGCCTTACTGAAGAGCGTCTCTAGACCCTaGGCGCGACAGATCTGCACACGTGCACACGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSCALLKSVSRP*ARQICTRAHGN Trigger: GTTGCCGTGTGCACGTGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | AGCTGTTCACTTAGTTCCCTTCCCTCTGAGGCAGTATaGAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SCSLSSLPSEAV*RLSHQRAISPA Trigger: TGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACTAAGTGAACAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | ACCAGAGAGCCATCTCCCCCGCACCACCCTGAGAAATaGCCAACTCCCCAGGTCATCCTATCATCTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TREPSPPHHPEK*PTPQVILSSSV Trigger: GACAGAAGATGATAGGATGACCTGGGGAGTTGGCCATTTCTCAGGGTGGTGCGGGGGAGATGGCTCTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | GATCTGCCAACTCTGGCCCACAGGCTGCTCGGAACTTaGCTAGTAGCTCACAGTCCACTCCCTCATCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DLPTLAHRLLGT*LVAHSPLPHLY Trigger: GTAGAGATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAGAGTTGGCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTGGGGTCCCCTGCCATCTGACATCAGGAGCGCTTaGCAGCAGGGAAACCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: STCCPPFLKLTGWGPLPSDIRSA*QQGNQH Trigger: ATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTC...AGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | TCTGCCCATTGCATGGCCACTAGGTCACGAAGGCACTaGGCTACACTATGTGAGGGGCTGAGGCGTCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAHCMATRSRRH*ATLCEGLRRLK Trigger: CTTAAGACGCCTCAGCCCCTCACATAGTGTAGCTCAGTGCCTTCGTGACCTAGTGGCCATGCAATGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | AGGCAGCGCACTCGGCCTTTGACATCAGGAGCGCTTTaGAGCAGGGAAACCAGCATGAATCTCAGTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RQRTRPLTSGAL*SRETSMNLSRL Trigger: TAGCCTACTGAGATTCATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTCAAAGGCCGAGTGCGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CGCCCAGTTGTGCTCAAAATATCTGATGAAAGCAGTTaGAGCCTGGGAACGCAACTCAGCCAGCGCCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPVVLKISDESS*SLGTQLSQRLA Trigger: AGCGAGGCGCTGGCTGAGTTGCGTTCCCAGGCTCCAACTGCTTTCATCAGATATTTTGAGCACAACTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR TCA 72 bp | ACTCTCCAACAACACTCGGTCGCCATTAACACCCTCTaGGGCTGCCTCTCCAGTTGCATCTGCCCATTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TLQQHSVAINTL*GCLSSCICPLH Trigger: ATGCAATGGGCAGATGCAACTGGAGAGGCAGCCTCAGAGGGTGTTAATGGCGACCGAGTGTTGTTGGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR GCA 72 bp | TTAGCTTCTTTCCATGACCTCCTCTGTGCATCCCCCTaGTCCAGCTCTATCCCTTTCTTGGCTGACCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LASFHDLLCASP*SSSIPFLADPV Trigger: GACAGGGTCAGCCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAGAAGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CATTCTCAGACTCAACCAGGTTGCCTCTCCGATCTATaGGCCCCAGCACCCTTACCCTATTCTCTATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HSQTQPGCLSDL*APAPLPYSLSG Trigger: CCCAGATAGAGAATAGGGTAAGGGTGCTGGGGCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGAGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | CCGTTCTTGGGGACTAACTCTAAGGGCTTCTCCACATaGACCTCCCTCCACTTTCTAACGTCGATCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PFLGTNSKGFST*TSLHFLTSIPF Trigger: GAAGGGGATCGACGTTAGAAAGTGGAGGGAGGTCCATGTGGAGAAGCCCTTAGAGTTAGTCCCCAAGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | TGCAGCCAGGGACTCAACCCTGTTCACTGCCCATTCTaGATTGCCTTTCAACACAGTTTGCACAGGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSQGLNPVHCPF*IAFQHSLHRGG Trigger: ACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCAAGCAGTATAGGATTTaGAATCTGCTAGGCGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSLPSEAVCRLSHQRAISKQYRI*NLLGGR Trigger: TCTGCCGCCTAGCAGATTCAAAATCCTATACTGCTT...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | TATTTCAAACGGAGGCTCTTTCCAGTCTTGAGGTTTTaGTGCACGTGCCCTCTCCTCCTGCAACTGTACGTC | + |
|
Preference number: 3 (lower is better) Translates to: YFKRRLFPVLRF*CTCPLLLQLYV Trigger: GACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | TCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTTaGGGTCCCCTGCCATCTCCATTTACTATGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: STCCPPFLKLTG*GPLPSPFTMPV Trigger: AACAGGCATAGTAAATGGAGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | ATTCTGGATTGCCTTTCAACACAGTTTGCACAGGGGTaGTGCATGGTACACCATTCCCCATCCCTAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILDCLSTQFAQG*CMVHHSPSLEA Trigger: GGCTTCTAGGGATGGGGAATGGTGTACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTGAGGCAGTATGCAGGTaGTCCCACCAGAGAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PHLFSRAMSFRYVLAISTEAVCR*SHQRAI Trigger: GATGGCTCTCTGGTGGGACAACCTGCATACTGCCTC...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCCAACCAGACTCCTTGACCATCTCTCAAGTGCAGTCGCCTCCCTTTCTCACACAGTCTCTACCATaGCTTGATCCTCCACGAACA | + |
|
Preference number: 3 (lower is better) Translates to: ILQPDSLTISQVQSPPFLTQSLP*LDPPRT Trigger: TGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGT...GAGAAAGGGAGGCGACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACAGGCTGCCTCTCCAGTaGCATCTGCCCATTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: PPILSPVLLILPGFSHFNRLPLQ*HLPIAW Trigger: CCATGCAATGGGCAGATGCAACTGGAGAGGCAGCCT...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCAGCTCTATCCCTTTCTaGGCTGACCCTGTCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPSSIPF*ADPVSH Trigger: ATGAGAGACAGGGTCAGCCAAGAAAGGGATAGAGCT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CCA 72 bp | ATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTaGCCATTAGCACTTCCCCAGGTGTGGCTCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IYFPGQCPFDMS*PLALPQVWLQD Trigger: ATCCTGGAGCCACACCTGGGGAAGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTTCAAAGACTATGTTCTaGCCCTCCATGTGGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLILPGFSHFNLVVSRASKTMF*PSMWRA Trigger: TGCCCTCCACATGGAGGGCAAGAACATAGTCTTTGA...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAAGCTCTATCCCTTTCTaGGCTGACCCTGTCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSLSWLTLSLITSSFPHLSSIPF*ADPVSH Trigger: ATGAGAGACAGGGTCAGCCAAGAAAGGGATAGAGCT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCTCAAAGACTATGTTCTaGCCCTCCATGTGGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PFLADPVSHNLFVSSFIFSKTMF*PSMWRA Trigger: TGCCCTCCACATGGAGGGCAAGAACATAGTCTTTGA...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTACTGTCTTCCTCTGCTTaGTCATCTCCCTTTAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLSWLTLSLITSSFPHLLSSSA*SSPFKN Trigger: GTTTTTAAAGGGAGATGACAAAGCAGAGGAAGACAG...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTGTCTTCCTCTGCTTaGTCATCTCCCTTTAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPILSPVLLILPGFSHFNLSSSA*SSPFKN Trigger: GTTTTTAAAGGGAGATGACAAAGCAGAGGAAGACAG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCACAGGCTGCTCGGAACTTGGCTAGTAGCTCACAGTCCACTCCCTCATGCAGGGCAGCTGGGCTaGGGAGGCCACGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHRLLGTWLVAHSPLPHAGQLG*GGHAVD Trigger: GTCCACAGCGTGGCCTCCCCAGCCCAGCTGCCCTGC...ATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCGTACCCACATGTCGTaGCGGGGCGCCCAGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHRTHMS*RGAQLC Trigger: GCACAACTGGGCGCCCCGCCACGACATGTGGGTACG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCATGGTCTGGGCCCTTaGAATGGGTCAGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHHGLGP*NGSAGG Trigger: GCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACGGCCAGCAAGTGGCCTaGGCGGAAGTGGTAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHGQQVA*AEVVGE Trigger: TTCGCCTACCACTTCCGCCCAGGCCACTTGCTGGCC...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCTGGCAGGCAGGAATTaGCCAGCAAGTGGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHLAGRN*PASGLG Trigger: GCCCAGGCCACTTGCTGGCCAATTCCTGCCTGCCAG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCGGTCCACCAATAGGATaGGTGGGAAGCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPGPPIG*VGSAAA Trigger: TGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACC...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCACTTCCTCCCTGTACTaGCTCCCCTGCAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPTSSLY*LPCSQG Trigger: TCCCTGGCTGCAGGGGAGGCAGTACAGGGAGGAAGT...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCAGCTCCGGTCCAGTaGAAACCTCGGGTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHPAPVQ*KPRVPC Trigger: ACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCGTGCCCTCTCCTCCTaGAACTGTACGTCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHRALSS*NCTSLQ Trigger: CTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | ACCTCTGGTCCAGCTGTGAGGCAGCGCACTCGGCCTTaGACATCAGGAGCGCTTTGCAGCAGGGAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGPAVRQRTRP*TSGALCSRETS Trigger: GCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTCAAAGGCCGAGTGCGCTGCCTCACAGCTGGACCAGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGAGGTCCAGGGTGCCCTaGAACCCAGGTAGCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWRSRVP*NPGSRS Trigger: GGACCGGCTACCTGGGTTGCAGGGCACCCTGGACCT...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACAGGTTTTGGTGCACGTaGCCTCTCCTCCTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHRFWCT*PLLLQL Trigger: CAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCTGTGAGTGGGTCAGCTaGCACTCAGTCACCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPCEWVS*HSVTTS Trigger: ACTCGTGGTGACTGAGTGCCAGCTGACCCACTCACA...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCCCAGTCTTGAGGTTTTaGTGCACGTGCCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPPVLRF*CTCPLL Trigger: GAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGG...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCTGCAGGGCAGGCATCTaGCAGCATAGATTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPCRAGI*QHRLSS Trigger: GCTGCTCAATCTATGCTGCCAGATGCCTGCCCTGCA...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | TCACTTAGTTCCCTTCCCTCTGAGGCAGTATGCAGGTaGTCCCACCAGAGAGCCATCTCCCCCGCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSLPSEAVCR*SHQRAISPAPP Trigger: GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACTAAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | GGCTGCGCACAAGAGCACAGGCATCCAGGTCACGGGTaGCTTCGTAGGCACGGAAACGTACCCACATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GCAQEHRHPGHG*LRRHGNVPTCR Trigger: ACGACATGTGGGTACGTTTCCGTGCCTACGAAGCAACCCGTGACCTGGATGCCTGTGCTCTTGTGCGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCACTCCTGTGCCTTACTaGAGAGCGTCTCTAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPTPVPY*RASLDP Trigger: AGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGT...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCATCCAGGAAGAAGTCTaGGGTGCCATCCTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPIQEEV*GAILKG Trigger: GCCCTTAAGGATGGCACCTCAGACTTCTTCCTGGAT...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACTTCCCCAGCAATCTCTaGGCAGGTCCATGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHFPSNL*AGPCGT Trigger: TGTTCCACATGGACCTGCTCAGAGATTGCTGGGGAA...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCTCACTCTCTCGATGAGGCCTTCCACAGTGGCTGGTCTCTGTGCCCCTTCCTGTTCCTCCTTCTaGACGGCTGCGCTCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLTLSMRPSTVAGLCAPSCSSF*TAALGK Trigger: CTTACCGAGCGCAGCCGTGCAGAAGGAGGAACAGGA...AGGGGCACAGAGACCAGCCACTGTGGAAGGCCTCATCGAGAGAGTGAGAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACTGGACTTGTTGGGCATaGGCACATCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHWTCWA*AHPCTP Trigger: TGGTGTGCAAGGATGTGCGCATGCCCAACAAGTCCA...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACACCACCCAACTCCTGTaGCTTACTGAAGAGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHTTQLL*LTEERL Trigger: GAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTCTGGGCCCTTGCAATaGGTCAGCAGGCGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWSGPLQ*VSRRRT Trigger: TGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTTGTCCGGCCACCTCTaGTCCAGCTGTGAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWLSGHL*SSCEAA Trigger: CGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACGAGGCAAAGTCTCTTTaGTTCCCCTGGGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHEAKSL*FPWAFF Trigger: GAAGAAGGCCCAGGGGAACCAAAGAGACTTTGCCTC...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACAGGCTGCTCGGAACTTaGCTAGTAGCTCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHRLLGT*LVAHSP Trigger: TGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCGGCTGCCTCTCCAGTTaGATCTGCCCATTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISGCLSS*ICPLHG Trigger: GCCATGCAATGGGCAGATGCAACTGGAGAGGCAGCC...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACAAGGGCTTCTCCACATaGACCTCCCTCCACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHKGFST*TSLHFL Trigger: TAGAAAGTGGAGGGAGGTCCATGTGGAGAAGCCCTT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTCCTGTTCCTCCTTCTaGACGGCTGCGCTCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWSCSSF*TAALGK Trigger: CTTACCGAGCGCAGCCGTGCAGAAGGAGGAACAGGA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGAGCCCCTCAAGCACTTaGAGGGCATCTAGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWSPSST*RASRTP Trigger: TGGGGTCCTAGATGCCCTGCAAGTGCTTGAGGGGCT...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGGCAGCAGCGCCCTGGTaGGCGATGTTAGAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWAAAPW*AMLEGT Trigger: TGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGC...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCAGTGGCTGGTCTCTGTaGCCCTCCCCTTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISSGWSL*PSPSLS Trigger: AGAAAGAGAAGGGGAGGGGCACAGAGACCAGCCACT...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCAGTCTCTGACCTCTaGCTCTCTCAAAAGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLRQYAGCPTREPSPPHHPVSDL*LSQKLF Trigger: AAAGAGCTTTTGAGAGAGCCAGAGGTCAGAGACTGG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCTTCCCCTCCAGTCTCTaGCCTCTGGCTCTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISFPSSL*PLALSK Trigger: TTTTGAGAGAGCCAGAGGTCAGAGACTGGAGGGGAA...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCTTCCCCAGCAATCTCTaGGCAGGTCCATGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISFPSNL*AGPCGT Trigger: TGTTCCACATGGACCTGCTCAGAGATTGCTGGGGAA...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTGCATGCGCACATCCTTaGACACCAGCAGCACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCACAHP*TPAARS Trigger: GCTACGTGCTGCTGGTGTGCAAGGATGTGCGCATGC...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCACCACCCAACTCCTGTaGCTTACTGAAGAGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISTTQLL*LTEERL Trigger: GAGACGCTCTTCAGTAAGGCACAGGAGTTGGGTGGT...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGCAGGGCAGCTGGGCTaGGGAGGCCACGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAAGQLG*GGHAVD Trigger: GTCCACAGCGTGGCCTCCCCAGCCCAGCTGCCCTGC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTGCAGGGCAGCTGGGCTaGGGAGGCCACGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTAGQLG*GGHAVD Trigger: GTCCACAGCGTGGCCTCCCCAGCCCAGCTGCCCTGC...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTGTGAGTGGGTCAGCTaGCACTCAGTCACCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWCEWVS*HSVTTS Trigger: ACTCGTGGTGACTGAGTGCCAGCTGACCCACTCACA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | ACTCAGCCAGCGCCTCGCTGTAAGCAGTATAGGATTTaGAATCTGCTAGGCGGCAGAGGAGTGGCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQPAPRCKQYRI*NLLGGRGVATG Trigger: ACCTGTGGCCACTCCTCTGCCGCCTAGCAGATTCAAAATCCTATACTGCTTACAGCGAGGCGCTGGCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | CGGAAACGTACCCACATGTCGTGGCGGGGCGCCCAGTaGTGCTCAAAATATCTGATGAAAGCAGTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRTHMSWRGAQ*CSKYLMKAVGA Trigger: GGCTCCAACTGCTTTCATCAGATATTTTGAGCACAACTGGGCGCCCCGCCACGACATGTGGGTACGTTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | AGATCTGCCAACTCTGGCCCACAGGCTGCTCGGAACTaGGCTAGTAGCTCACAGTCCACTCCCTCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSANSGPQAARN*ASSSQSTPSSL Trigger: TAGAGATGAGGGAGTGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCTGTGGGCCAGAGTTGGCAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTGGACTTGTTGGGCATaGGCACATCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWWTCWA*AHPCTP Trigger: TGGTGTGCAAGGATGTGCGCATGCCCAACAAGTCCA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGAGCTCTTTTTCCAGCTaGGCTCCTGTCCCTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWSSFSS*APVPSR Trigger: TCGTGAAGGGACAGGAGCCCAGCTGGAAAAAGAGCT...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCTTCCTTCAAGACTCTTaGCATTCTCAGACTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAVCRLSHQRAISPAPPFLQDS*HSQTQP Trigger: TGGTTGAGTCTGAGAATGCCAAGAGTCTTGAAGGAA...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | ACGACCCCTCACCTTCTGATTCTCCAACCAGACTCCTaGACCATCTCTCAAGTGCAGTCGCCTCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTPHLLILQPDS*TISQVQSPPFL Trigger: GAGAAAGGGAGGCGACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGAGAATCAGAAGGTGAGGGGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | GCCAGGGACTCAACCCTGTTCACTGCCCATTCTGGATaGCCTTTCAACACAGTTTGCACAGGGGTGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARDSTLFTAHSG*PFNTVCTGVVH Trigger: ATGCACCACCCCTGTGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAGTGAACAGGGTTGAGTCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTGACTAGAAACCTCCCACTTCTCTCCTCTGCAGTCTCCGGCCCTTTCTGCTGTCGAAGAAGCGGCTaGACTCAGCCCAAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTRNLPLLSSAVSGPFCCRRSG*TQPKRR Trigger: TCTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACA...GCAGAAAGGGCCGGAGACTGCAGAGGAGAGAAGTGGGAGGTTTCTAGTCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTCCAACCAGACTCCTTaGCCATCTCTCAAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMTSSVHPPAPALSLSWSNQTP*PSLKCS Trigger: ACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTGGCCTCCGGATCTGTaGGGAAGAGCCCCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPWPPDL*GRAPQA Trigger: TGCTTGAGGGGCTCTTCCGCACAGATCCGGAGGCCA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAAGGTCCAGGGTGCCCTaGAACCCAGGTAGCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLRSRVP*NPGSRS Trigger: GGACCGGCTACCTGGGTTGCAGGGCACCCTGGACCT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCACTTCCTCCCTGTACTaGCTCCCCTGCAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPTSSLY*LPCSQG Trigger: TCCCTGGCTGCAGGGGAGGCAGTACAGGGAGGAAGT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCGTACCCACATGTCGTaGCGGGGCGCCCAGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTRTHMS*RGAQLC Trigger: GCACAACTGGGCGCCCCGCCACGACATGTGGGTACG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | CTCCACCTGCTGTCCTCCATTCTTGAAACTCACAGGTaGGGGTCCCCTGCCATCTCCATTTACTATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLLSSILETHR*GSPAISIYYAC Trigger: ACAGGCATAGTAAATGGAGATGGCAGGGGACCCCAACCTGTGAGTTTCAAGAATGGAGGACAGCAGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCTTGCGTCCTCTAAATaGACAACAACAATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSEAVCRLSHQRAISLASSK*TTTMSS Trigger: GGAGGACATTGTTGTTGTTCATTTAGAGGACGCAAG...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTACATGGTCTGGGCCCTTaGAATGGGTCAGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLHGLGP*NGSAGG Trigger: GCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATG...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCGGCTGCCTCTCCAGTTaGATCTGCCCATTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPGCLSS*ICPLHG Trigger: GCCATGCAATGGGCAGATGCAACTGGAGAGGCAGCC...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTGGCCAGCAAGTGGCCTaGGCGGAAGTGGTAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTGQQVA*AEVVGE Trigger: TTCGCCTACCACTTCCGCCCAGGCCACTTGCTGGCC...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTACTGGCAGGCAGGAATTaGCCAGCAAGTGGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLLAGRN*PASGLG Trigger: GCCCAGGCCACTTGCTGGCCAATTCCTGCCTGCCAG...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTTCTGGGCCCTTGCAATaGGTCAGCAGGCGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRASGPLQ*VSRRRT Trigger: TGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGA...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCACACCAGCTTCACCTTaGCCTCCGGATCTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPTPASP*PPDLCG Trigger: TCCGCACAGATCCGGAGGCCAAGGTGAAGCTGGTGT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTGTCCGGCCACCTCTaGTCCAGCTGTGAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLLSGHL*SSCEAA Trigger: CGCTGCCTCACAGCTGGACCAGAGGTGGCCGGACAA...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTAAGGGCTTCTCCACATaGACCTCCCTCCACTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCKGFST*TSLHFL Trigger: TAGAAAGTGGAGGGAGGTCCATGTGGAGAAGCCCTT...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCCACAGGGGTGGTGCATaGTACACCATTCCCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPHRGGA*YTIPHP Trigger: GGGATGGGGAATGGTGTACCATGCACCACCCCTGTG...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCCCTCAGCTCCCCTCTaGTCTCCGTTCTTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNPSAPL*SPFLGT Trigger: AGTCCCCAAGAACGGAGATCAGAGGGGAGCTGAGGG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTTGGCCTCCGGATCTGTaGGGAAGAGCCCCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAWPPDL*GRAPQA Trigger: TGCTTGAGGGGCTCTTCCGCACAGATCCGGAGGCCA...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCAGTGGCTGGTCTCTGTaGCCCTCCCCTTCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPSGWSL*PSPSLS Trigger: AGAAAGAGAAGGGGAGGGGCACAGAGACCAGCCACT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCTGTACTGCCTCCCCTaGAGCCAGGGACTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTLYCLP*SQGLNP Trigger: AGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGGCCGCAGCAGCGCCCTaGTGCGCGATGTTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLAAAAP*CAMLEG Trigger: TCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGC...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCGCCGCAGCAGCGCCCTaGTGCGCGATGTTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFAAAAP*CAMLEG Trigger: TCCTTCTAACATCGCGCACCAGGGCGCTGCTGCGGC...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCGCCTTCCACAGTGGCTaGTCTCTGTGCCCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFAFHSG*SLCPSP Trigger: AGGGGAGGGGCACAGAGACCAGCCACTGTGGAAGGC...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGGCCTTCCACAGTGGCTaGTCTCTGTGCCCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLAFHSG*SLCPSP Trigger: AGGGGAGGGGCACAGAGACCAGCCACTGTGGAAGGC...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCCCAGTCTTGAGGTTTTaGTGCACGTGCCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPPVLRF*CTCPLL Trigger: GAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGG...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTCCAGCTCCGGTCCAGTaGAAACCTCGGGTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAPAPVQ*KPRVPC Trigger: ACATGGGACCCGAGGTTTCCACTGGACCGGAGCTGG...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | CTATTTCAAACGGAGGCTCTTTCCAGTCTTGAGGTTTaGGTGCACGTGCCCTCTCCTCCTGCAACTGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQTEALSSLEV*VHVPSPPATVR Trigger: ACGTACAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCTCCGTTTGAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCGTCTCTACCATTGCTTaGTCCTCCACGAACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPVSTIA*SSTNTS Trigger: GCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGAC...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTAGCGTCTCTAGACCCTaGGCGCGACAGATCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTSVSRP*ARQICT Trigger: TGTGCAGATCTGTCGCGCTCAGGGTCTAGAGACGCT...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCACTCCTGTGCCTTACTaGAGAGCGTCTCTAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPTPVPY*RASLDP Trigger: AGGGTCTAGAGACGCTCTTCAGTAAGGCACAGGAGT...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGCCATTAACACCCTCTaGGGCTGCCTCTCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAAINTL*GCLSSC Trigger: GCAACTGGAGAGGCAGCCTCAGAGGGTGTTAATGGC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGCCCTCAGCTCCCCTCTaGTCTCCGTTCTTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLPSAPL*SPFLGT Trigger: AGTCCCCAAGAACGGAGATCAGAGGGGAGCTGAGGG...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTTCCTGTTCCTCCTTCTaGACGGCTGCGCTCGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTSCSSF*TAALGK Trigger: CTTACCGAGCGCAGCCGTGCAGAAGGAGGAACAGGA...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAGCATGCGCACATCCTTaGACACCAGCAGCACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLACAHP*TPAARS Trigger: GCTACGTGCTGCTGGTGTGCAAGGATGTGCGCATGC...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTGGACTTGTTGGGCATaGGCACATCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPWTCWA*AHPCTP Trigger: TGGTGTGCAAGGATGTGCGCATGCCCAACAAGTCCA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCGGTCCACCAATAGGATaGGTGGGAAGCGCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFGPPIG*VGSAAA Trigger: TGCTGCGGCGCTTCCCACGCATCCTATTGGTGGACC...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTACGTGCCCTCTCCTCCTaGAACTGTACGTCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLRALSS*NCTSLQ Trigger: CTGGAGAGACGTACAGTTGCAGGAGGAGAGGGCACG...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCCCACTTCTCTCCTCTaGAGTCTCCGGCCCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNPTSLL*SLRPFL Trigger: CAGAAAGGGCCGGAGACTGCAGAGGAGAGAAGTGGG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCCCACTTCTCTCCTCTaGAGTCTCCGGCCCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTPTSLL*SLRPFL Trigger: CAGAAAGGGCCGGAGACTGCAGAGGAGAGAAGTGGG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTCTGCCCATTCTGGATTaGCTTTCAACACAGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCLPILD*LSTQFA Trigger: TGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAG...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCCTGTACTGCCTCCCCTaGAGCCAGGGACTCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFLYCLP*SQGLNP Trigger: AGGGTTGAGTCCCTGGCTGCAGGGGAGGCAGTACAG...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAGCATCTAGGACCCCATaGTCTGGGCCCTTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLASRTP*SGPLQW Trigger: CCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGC...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTACTGAGCAGGTCCATGTaGAACAAGGCTGCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLLSRSM*NKAAPV Trigger: CACAGGGGCAGCCTTGTTCCACATGGACCTGCTCAG...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTCTGAGCAGGTCCATGTaGAACAAGGCTGCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRALSRSM*NKAAPV Trigger: CACAGGGGCAGCCTTGTTCCACATGGACCTGCTCAG...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCGCCATTAACACCCTCTaGGGCTGCCTCTCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFAINTL*GCLSSC Trigger: GCAACTGGAGAGGCAGCCTCAGAGGGTGTTAATGGC...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTCCAACCAGACTCCTTaGCCATCTCTCAAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPSNQTP*PSLKCS Trigger: ACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGGCTCTTTCCAGTCTTaGGGTTTTGGTGCACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAGSFQS*GFGARA Trigger: GGCACGTGCACCAAAACCTCAAGACTGGAAAGAGCC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCAGCCCCTCAAGCACTTaGAGGGCATCTAGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFSPSST*RASRTP Trigger: TGGGGTCCTAGATGCCCTGCAAGTGCTTGAGGGGCT...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCGCAGCAGCGCCCTGGTaGGCGATGTTAGAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFAAAPW*AMLEGT Trigger: TGTTCCTTCTAACATCGCGCACCAGGGCGCTGCTGC...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCCCTGTGAGGAGACGTaGAGCAAAGAGGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTPCEET*SKEVSA Trigger: TGCAGACACCTCTTTGCTGCACGTCTCCTCACAGGG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGGCATCTAGGACCCCATaGTCTGGGCCCTTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLASRTP*SGPLQW Trigger: CCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGC...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGACACCAGCTTCACCTTaGCCTCCGGATCTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLTPASP*PPDLCG Trigger: TCCGCACAGATCCGGAGGCCAAGGTGAAGCTGGTGT...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTTGCAGGGCAGGCATCTaGCAGCATAGATTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTCRAGI*QHRLSS Trigger: GCTGCTCAATCTATGCTGCCAGATGCCTGCCCTGCA...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACTGTCGAAGAAGCGGCTaGACTCAGCCCAAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNCRRSG*TQPKRR Trigger: TCTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACA...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACGTCTCTACCATTGCTTaGTCCTCCACGAACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNVSTIA*SSTNTS Trigger: GCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGAC...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCCGACCCCTCACCTTCTaGTTCTCCAACCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFRPLTF*FSNQTP Trigger: AGGAGTCTGGTTGGAGAATCAGAAGGTGAGGGGTCG...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTATCCAGGAAGAAGTCTaGGGTGCCATCCTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTIQEEV*GAILKG Trigger: GCCCTTAAGGATGGCACCTCAGACTTCTTCCTGGAT...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAACATCAGGAGCGCTTTaGAGCAGGGAAACCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLTSGAL*SRETSM Trigger: CATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCCTCTTTCTCCATCCTTaGCCTATTCCTGGGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPLFLHP*PIPGFT Trigger: AGTGAACCCAGGAATAGGGCAAGGATGGAGAAAGAG...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGAGGTTTTGGTGCACGTaGCCTCTCCTCCTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLRFWCT*PLLLQL Trigger: CAGTTGCAGGAGGAGAGGGCACGTGCACCAAAACCT...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGCCCTGTGAGGAGACGTaGAGCAAAGAGGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLPCEET*SKEVSA Trigger: TGCAGACACCTCTTTGCTGCACGTCTCCTCACAGGG...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAAGCTCTTTTTCCAGCTaGGCTCCTGTCCCTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLSSFSS*APVPSR Trigger: TCGTGAAGGGACAGGAGCCCAGCTGGAAAAAGAGCT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCAGTTTGCACAGGGGTaGTGCATGGTACACCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNQFAQG*CMVHHS Trigger: GGAATGGTGTACCATGCACCACCCCTGTGCAAACTG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATCTCTTTGGTTCCCCTaGGCCTTCTTCACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLSLWFP*AFFTSS Trigger: GGAGGAAGTGAAGAAGGCCCAGGGGAACCAAAGAGA...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAGAGGCAAAGTCTCTTTaGTTCCCCTGGGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSWLTLSLITSSFPHLEAKSL*FPWAFF Trigger: GAAGAAGGCCCAGGGGAACCAAAGAGACTTTGCCTC...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTTCCCCTCCAGTCTCTaGCCTCTGGCTCTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLFPSSL*PLALSK Trigger: TTTTGAGAGAGCCAGAGGTCAGAGACTGGAGGGGAA...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCACATCAGGAGCGCTTTaGAGCAGGGAAACCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFTSGAL*SRETSM Trigger: CATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGT...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCCTTTCAACACAGTTTaGACAGGGGTGGTGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLFSRAMSFRYVLAISTPFNTV*TGVVHG Trigger: ACCATGCACCACCCCTGTGCAAACTGTGTTGAAAGG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGCAGTTTGCACAGGGGTaGTGCATGGTACACCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLQFAQG*CMVHHS Trigger: GGAATGGTGTACCATGCACCACCCCTGTGCAAACTG...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGAGGCTGCTCGGAACTTaGCTAGTAGCTCACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQFCSFFLAFPISTLRLLGT*LVAHSP Trigger: TGGACTGTGAGCTACTAGCCAAGTTCCGAGCAGCCT...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| 3UTR CAA 72 bp | GTCCCCTGCCATCTCCATTTACTATGCCTGTTGCTCTaGCGTCCTCTAAATGAACAACAACAATGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPCHLHLLCLLL*RPLNEQQQCPP Trigger: TGGAGGACATTGTTGTTGTTCATTTAGAGGACGCAAGAGCAACAGGCATAGTAAATGGAGATGGCAGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| 3UTR CAA 72 bp | CCCAGGTCATCCTATCATCTTCTGTCTTCCTCTGCTTaGTCATCTCCCTTTAAAAACTGTCTTCACCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSYHLLSSSA*SSPFKNCLHPF Trigger: GAAGGGGTGAAGACAGTTTTTAAAGGGAGATGACAAAGCAGAGGAAGACAGAAGATGATAGGATGACCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCCTCTTTCTCCATCCTTaGCCTATTCCTGGGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFLFLHP*PIPGFT Trigger: AGTGAACCCAGGAATAGGGCAAGGATGGAGAAAGAG...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTGCCCATTCTGGATTaGCTTTCAACACAGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPILSPVLLILPGFSHFNLPILD*LSTQFA Trigger: TGCAAACTGTGTTGAAAGGCAATCCAGAATGGGCAG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCCTTGCGTCCTCTAAATaGACAACAACAATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLADPVSHNLFVSSFIFLASSK*TTTMSS Trigger: GGAGGACATTGTTGTTGTTCATTTAGAGGACGCAAG...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTTTCCTTCAAGACTCTTaGCATTCTCAGACTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLILPGFSHFNLVVSRAFLQDS*HSQTQP Trigger: TGGTTGAGTCTGAGAATGCCAAGAGTCTTGAAGGAA...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCCCATGGTCTGGGCCCTaGCAATGGGTCAGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAVCRLSHQRAISPAPPPWSGP*QWVSRR Trigger: CCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGG...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 90 bp | GTGCGGAAGAGCCCCTCAAGCACTTGCAGGGCATCTAGGACCCCATaGTCTGGGCCCTTGCAATGGGTCAGCAGGCGGCGCACATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRKSPSSTCRASRTP*SGPLQWVSRRRTSA Trigger: TGCTGATGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCTGCAAGTGCTTGAGGGGCTCTTCCGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS GCA 90 bp | CCTCAAGCACTTGCAGGGCATCTAGGACCCCATGGTCTGGGCCCTTaGAATGGGTCAGCAGGCGGCGCACATCAGCAGGGGCCACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PQALAGHLGPHGLGP*NGSAGGAHQQGPQT Trigger: AGTTTGTGGCCCCTGCTGATGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCTGCAAGTGCTTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 90 bp | TGTAGAGTGGGGGCGTGTTGGCCCAGGGGCTTCGTGCCACACGTGTaGAGCTCTTCACCGAGAAGACTACCAGTCGCTGCTGGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: CRVGACWPRGFVPHV*SSSPRRLPVAAGTT Trigger: AGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCACACGTGTGGCACGAAGCCCCTGGGCCAACACGCCCCCACTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCGCTGCTGGCACCACTaGTCGAAGAAGCGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLRQYAGCPTREPSPPHHRCWHH*SKKRLN Trigger: GTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCG...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS GCA 90 bp | GTGGATAAGCCTGTAGAGTGGGGGCGTGTTGGCCCAGGGGCTTCGTaGCACACGTGTGGAGCTCTTCACCGAGAAGACTACCAGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDKPVEWGRVGPGAS*HTCGALHREDYQSL Trigger: CAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCACACGTGTGGCACGAAGCCCCTGGGCCAACACGCCCCCACTCTACAGGCTTATCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS GCA 90 bp | TTCACCTTGGCCTCCGGATCTGTGCGGAAGAGCCCCTCAAGCACTTaGAGGGCATCTAGGACCCCATGGTCTGGGCCCTTGCAATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLASGSVRKSPSST*RASRTPWSGPLQWV Trigger: GACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCTGCAAGTGCTTGAGGGGCTCTTCCGCACAGATCCGGAGGCCAAGGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 90 bp | CAGCAGCACGTAGCTGTACTTGAGCACGTGGATAAGCCTGTAGAGTaGGGGCGTGTTGGCCCAGGGGCTTCGTGCCACACGTGTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QQHVAVLEHVDKPVE*GRVGPGASCHTCGA Trigger: AGCTCCACACGTGTGGCACGAAGCCCCTGGGCCAACACGCCCCCACTCTACAGGCTTATCCACGTGCTCAAGTACAGCTACGTGCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS CCA 90 bp | AGCACTTGCAGGGCATCTAGGACCCCATGGTCTGGGCCCTTGCAATaGGTCAGCAGGCGGCGCACATCAGCAGGGGCCACAAACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: STCRASRTPWSGPLQ*VSRRRTSAGATNCL Trigger: CAAACAGTTTGTGGCCCCTGCTGATGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCTGCAAGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 90 bp | AGCAGGCGGCGCACATCAGCAGGGGCCACAAACTGTTTGGAGATCTaGTTGGTGATGCGGACTGGCAGGCAGGAATTGGCCAGCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRTSAGATNCLEI*LVMRTGRQELASKW Trigger: CCACTTGCTGGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCTGATGTGCGCCGCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCTCACTCTCTCGATGAGGCCTTCCACAGTGGCTGGTCTCTGTGCCCCTCGCTGCTGGCACCACTaGTCGAAGAAGCGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFLTLSMRPSTVAGLCAPRCWHH*SKKRLN Trigger: GTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCG...AGGGGCACAGAGACCAGCCACTGTGGAAGGCCTCATCGAGAGAGTGAGAAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCGACATCAGGAGCGCTTaGCAGCAGGGAAACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SEAVCRLSHQRAISPAPPDIRSA*QQGNQH Trigger: ATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTC...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCTCCAGTCTTGAGGTTTaGGTGCACGTGCCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SEAVCRLSHQRAISPAPPSSLEV*VHVPSP Trigger: AGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGA...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCAGGCCCCGCCTCCTTTaGACTAGAAACCTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SEAVCRLSHQRAISPAPPRPRLL*TRNLPL Trigger: AAGTGGGAGGTTTCTAGTCAAAAGGAGGCGGGGCCT...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACCCGCCTTTCAACACAGTTaGCACAGGGGTGGTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAVCRLSHQRAISPAPPAFQHS*HRGGAW Trigger: CCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGC...GGGTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS GCA 90 bp | CGTGCCACACGTGTGGAGCTCTTCACCGAGAAGACTACCAGTCGCTaGTGGCACCACTTGTCGAAGAAGCGGCTGAACTCAGCCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RATRVELFTEKTTSR*WHHLSKKRLNSAQE Trigger: CTCTTGGGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCACACGTGTGGCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS CCA 90 bp | AGCAGGGGCCACAAACTGTTTGGAGATCTGGTTGGTGATGCGGACTaGCAGGCAGGAATTGGCCAGCAAGTGGCCTGGGCGGAAGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRGHKLFGDLVGDAD*QAGIGQQVAWAEVV Trigger: TACCACTTCCGCCCAGGCCACTTGCTGGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTCCATGGTCTGGGCCCTaGCAATGGGTCAGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCPWSGP*QWVSRR Trigger: CCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGG...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 90 bp | GCCACACGTGTGGAGCTCTTCACCGAGAAGACTACCAGTCGCTGCTaGCACCACTTGTCGAAGAAGCGGCTGAACTCAGCCCAAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATRVELFTEKTTSRC*HHLSKKRLNSAQEK Trigger: CTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCACACGTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCACGCTGTGGACTTGTaGGGCATGCGCACATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSEAVCRLSHQRAISHAVDL*GMRTSL Trigger: CAAGGATGTGCGCATGCCCAACAAGTCCACAGCGTG...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCCCTTCCCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCGCAAAGGGCTCAGCTaGACAGTGATGAAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSEAVCRLSHQRAISRKGLS*TVMKAG Trigger: CCCTGCCTTCATCACTGTCAAGCTGAGCCCTTTGCG...GGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGGGAAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGAACACCAGCTTCACCTaGGCCTCCGGATCTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSMTSSVHPPAPALSLSWNTSFT*ASGSVR Trigger: CCGCACAGATCCGGAGGCCAAGGTGAAGCTGGTGTT...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACAGTCTCTACCATTGCTaGATCCTCCACGAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLRQYAGCPTREPSPPHHSLYHC*ILHEHQ Trigger: CTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTGAGGCAGTATGCAGGTTGTCCCACCAGAGAGCCATCTCCCCCGCACCACATCTGGCAGCATAGATaGAGCAGCTGCAGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLRQYAGCPTREPSPPHHIWQHR*SSCSVS Trigger: TGACACACTGCAGCTGCTCAATCTATGCTGCCAGAT...GTGGTGCGGGGGAGATGGCTCTCTGGTGGGACAACCTGCATACTGCCTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS TCA 90 bp | GCCCTGGTGCGCGATGTTAGAAGGAACACAGTCTCTACCATTGCTTaGTCCTCCACGAACACCAGCTTCACCTTGGCCTCCGGATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVRDVRRNTVSTIA*SSTNTSFTLASGSV Trigger: CACAGATCCGGAGGCCAAGGTGAAGCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATGACCTCCTCTGTGCATCCCCCTGCTCCAGCTCTATCCCTTTCTTGGTGGCGGGGCGCCCAGTaGTGCTCAAAATATCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSMTSSVHPPAPALSLSWWRGAQ*CSKYLM Trigger: CATCAGATATTTTGAGCACAACTGGGCGCCCCGCCA...CCAAGAAAGGGATAGAGCTGGAGCAGGGGGATGCACAGAGGAGGTCATGGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTAGGCTGCCTCTCCAGTaGCATCTGCCCATTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCRLPLQ*HLPIAW Trigger: CCATGCAATGGGCAGATGCAACTGGAGAGGCAGCCT...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTCTTGAAACTCACAGGTaGGGGTCCCCTGCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCLETHR*GSPAIS Trigger: GGAGATGGCAGGGGACCCCAACCTGTGAGTTTCAAG...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCAACCAGACTCCTTGACCATCTCTCAAGTGCAGTCGCCTCCCTTTCTCCGCAAAGGGCTCAGCTaGACAGTGATGAAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILQPDSLTISQVQSPPFLRKGLS*TVMKAG Trigger: CCCTGCCTTCATCACTGTCAAGCTGAGCCCTTTGCG...GAGAAAGGGAGGCGACTGCACTTGAGAGATGGTCAAGGAGTCTGGTTGGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTGTGGCTCCAGGATCTCAGAGATAATAGCCAGCATTCCCTAGGATGTAGGCTCTTTCCAGTCTaGAGGTTTTGGTGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQVWLQDLRDNSQHSLGCRLFPV*RFWCTC Trigger: GCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCT...ACATCCTAGGGAATGCTGGCTATTATCTCTGAGATCCTGGAGCCACACCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTCGCTGCTGGCACCACTaGTCGAAGAAGCGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PHLFSRAMSFRYVLAISTRCWHH*SKKRLN Trigger: GTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCG...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAAACACCAGCTTCACCTaGGCCTCCGGATCTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSWLTLSLITSSFPHLNTSFT*ASGSVR Trigger: CCGCACAGATCCGGAGGCCAAGGTGAAGCTGGTGTT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTCAGACTCAACCAGGTaGCCTCTCCGATCTATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPSDSTR*PLRSMG Trigger: GCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCTCCAGTCTTGAGGTTTaGGTGCACGTGCCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPSSLEV*VHVPSP Trigger: AGGAGAGGGCACGTGCACCAAAACCTCAAGACTGGA...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTCCCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCGCCTTTCAACACAGTTaGCACAGGGGTGGTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSLLSFLQFCSFFLAFPAFQHS*HRGGAW Trigger: CCATGCACCACCCCTGTGCAAACTGTGTTGAAAGGC...GGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGGGAGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS TCA 90 bp | AGAAGACTACCAGTCGCTGCTGGCACCACTTGTCGAAGAAGCGGCTaGACTCAGCCCAAGAGAAGAAAGTTCGATCCAACAATTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLPVAAGTTCRRSG*TQPKRRKFDPTIPV Trigger: AACAGGAATTGTTGGATCGAACTTTCTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 ENSMUST00000144470.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCGCAAAGGGCTCAGCTaGACAGTGATGAAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPILSPVLLILPGFSHFNRKGLS*TVMKAG Trigger: CCCTGCCTTCATCACTGTCAAGCTGAGCCCTTTGCG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTAGGCTGCCTCTCCAGTaGCATCTGCCCATTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLILPGFSHFNLVVSRARLPLQ*HLPIAW Trigger: CCATGCAATGGGCAGATGCAACTGGAGAGGCAGCCT...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGAAACTCACAGGTaGGGGTCCCCTGCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPILSPVLLILPGFSHFNLETHR*GSPAIS Trigger: GGAGATGGCAGGGGACCCCAACCTGTGAGTTTCAAG...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCCACGCTGTGGACTTGTaGGGCATGCGCACATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFLADPVSHNLFVSSFIFHAVDL*GMRTSL Trigger: CAAGGATGTGCGCATGCCCAACAAGTCCACAGCGTG...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGACATCAGGAGCGCTTaGCAGCAGGGAAACCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLILPGFSHFNLVVSRADIRSA*QQGNQH Trigger: ATGCTGGTTTCCCTGCTGCAAAGCGCTCCTGATGTC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTTGGCGGGGCGCCCAGTaGTGCTCAAAATATCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLLILPGFSHFNLVVSRAWRGAQ*CSKYLM Trigger: CATCAGATATTTTGAGCACAACTGGGCGCCCCGCCA...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTAGTCTCTAGGGCTGGAGGCAAAGTCTCTTaGGTTCCCCTGGGCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLILPGFSHFNLVVSRAGGKVS*VPLGLL Trigger: AAGAAGGCCCAGGGGAACCAAAGAGACTTTGCCTCC...AGCCCTAGAGACTACAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCATTTATTTTCCAGGGCAATGTCCTTTCGATATGTCCTGGCCATTAGCACTGGAGGCAAAGTCTCTTaGGTTCCCCTGGGCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PHLFSRAMSFRYVLAISTGGKVS*VPLGLL Trigger: AAGAAGGCCCAGGGGAACCAAAGAGACTTTGCCTCC...AGTGCTAATGGCCAGGACATATCGAAAGGACATTGCCCTGGAAAATAAATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGTCAGACTCAACCAGGTaGCCTCTCCGATCTATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQFCSFFLAFPISTLSDSTR*PLRSMG Trigger: GCCCATAGATCGGAGAGGCAACCTGGTTGAGTCTGA...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCAGGCCCCGCCTCCTTTaGACTAGAAACCTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLADPVSHNLFVSSFIFRPRLL*TRNLPL Trigger: AAGTGGGAGGTTTCTAGTCAAAAGGAGGCGGGGCCT...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTCCTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACAGTCTCTACCATTGCTaGATCCTCCACGAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPILSPVLLILPGFSHFNSLYHC*ILHEHQ Trigger: CTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACT...GTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGAGGCTCTTTCCAGTCTaGAGGTTTTGGTGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQFCSFFLAFPISTLRLFPV*RFWCTC Trigger: GCACGTGCACCAAAACCTCAAGACTGGAAAGAGCCT...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTATCCTTTCTCCAGTTTTGCTCATTCTTCCTGGCTTTTCCCATTTCAACCTTGACACAGTCTCTACCATaGCTTGATCCTCCACGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQFCSFFLAFPISTLTQSLP*LDPPRT Trigger: TGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGT...CAAGGTTGAAATGGGAAAAGCCAGGAAGAATGAGCAAAACTGGAGAAAGGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTATTTTCACACAGTCTCTACCATaGCTTGATCCTCCACGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PFLADPVSHNLFVSSFIFTQSLP*LDPPRT Trigger: TGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGT...GAAAATAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS-3UTR CAA 90 bp | CTATCCCTTTCTTGGCTGACCCTGTCTCTCATAACCTCTTCGTTTCCTCATTTAAAGCAGTATAGGATTTaGAATCTGCTAGGCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSWLTLSLITSSFPHLKQYRI*NLLGGR Trigger: TCTGCCGCCTAGCAGATTCAAAATCCTATACTGCTT...TAAATGAGGAAACGAAGAGGTTATGAGAGACAGGGTCAGCCAAGAAAGGGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 72 bp | GCGGACTGGCAGGCAGGAATTGGCCAGCAAGTGGCCTaGGCGGAAGTGGTAGGCGAACTCACGTGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADWQAGIGQQVA*AEVVGELTWAG Trigger: GCCTGCCCACGTGAGTTCGCCTACCACTTCCGCCCAGGCCACTTGCTGGCCAATTCCTGCCTGCCAGTCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CAA 72 bp | GGGCAGCTGGGCTGGGGAGGCCACGCTGTGGACTTGTaGGGCATGCGCACATCCTTGCACACCAGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GQLGWGGHAVDL*GMRTSLHTSST Trigger: CGTGCTGCTGGTGTGCAAGGATGTGCGCATGCCCAACAAGTCCACAGCGTGGCCTCCCCAGCCCAGCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS GCA 72 bp | CTTGCAGGGCATCTAGGACCCCATGGTCTGGGCCCTTaGAATGGGTCAGCAGGCGGCGCACATCAGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGHLGPHGLGP*NGSAGGAHQQG Trigger: CCCCTGCTGATGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCTGCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 72 bp | AGGGCATCTAGGACCCCATGGTCTGGGCCCTTGCAATaGGTCAGCAGGCGGCGCACATCAGCAGGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RASRTPWSGPLQ*VSRRRTSAGAT Trigger: TGTGGCCCCTGCTGATGTGCGCCGCCTGCTGACCCATTGCAAGGGCCCAGACCATGGGGTCCTAGATGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CCA 72 bp | GTAGCTGTACTTGAGCACGTGGATAAGCCTGTAGAGTaGGGGCGTGTTGGCCCAGGGGCTTCGTGCCACACG | + |
|
Preference number: 6 (lower is better) Translates to: VAVLEHVDKPVE*GRVGPGASCHT Trigger: CGTGTGGCACGAAGCCCCTGGGCCAACACGCCCCCACTCTACAGGCTTATCCACGTGCTCAAGTACAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
||
| CDS CAA 72 bp | AGCAGGCGGCGCACATCAGCAGGGGCCACAAACTGTTaGGAGATCTGGTTGGTGATGCGGACTGGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRRTSAGATNC*EIWLVMRTGRQ Trigger: CTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCTGATGTGCGCCGCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
||
| CDS CAA 90 bp | AGGCGGCGCACATCAGCAGGGGCCACAAACTGTTTGGAGATCTGGTaGGTGATGCGGACTGGCAGGCAGGAATTGGCCAGCAAGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRTSAGATNCLEIW*VMRTGRQELASKWP Trigger: AGGCCACTTGCTGGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCTGATGTGCGCCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS CAA 90 bp | CAATGGGTCAGCAGGCGGCGCACATCAGCAGGGGCCACAAACTGTTaGGAGATCTGGTTGGTGATGCGGACTGGCAGGCAGGAATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QWVSRRRTSAGATNC*EIWLVMRTGRQELA Trigger: GGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCTGATGTGCGCCGCCTGCTGACCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS CCA 72 bp | GTGGAGCTCTTCACCGAGAAGACTACCAGTCGCTGCTaGCACCACTTGTCGAAGAAGCGGCTGAACTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VELFTEKTTSRC*HHLSKKRLNSA Trigger: GGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| CDS CCA 72 bp | CACAAACTGTTTGGAGATCTGGTTGGTGATGCGGACTaGCAGGCAGGAATTGGCCAGCAAGTGGCCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: HKLFGDLVGDAD*QAGIGQQVAWA Trigger: CGCCCAGGCCACTTGCTGGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS CAA 90 bp | GCAGCGCCCTGGTGCGCGATGTTAGAAGGAACACAGTCTCTACCATaGCTTGATCCTCCACGAACACCAGCTTCACCTTGGCCTCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: AAPWCAMLEGTQSLP*LDPPRTPASPWPPD Trigger: ATCCGGAGGCCAAGGTGAAGCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCAGGGCGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS TCA 72 bp | CAGCAGGGGCCACAAACTGTTTGGAGATCTGGTTGGTaGTGCGGACTGGCAGGCAGGAATTGGCCAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QQGPQTVWRSGW*CGLAGRNWPAS Trigger: ACTTGCTGGCCAATTCCTGCCTGCCAGTCCGCATCACCAACCAGATCTCCAAACAGTTTGTGGCCCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS GCA 72 bp | CGTGTGGAGCTCTTCACCGAGAAGACTACCAGTCGCTaGTGGCACCACTTGTCGAAGAAGCGGCTGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RVELFTEKTTSR*WHHLSKKRLNS Trigger: TGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAAGAGCTCCACACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| CDS CAA 72 bp | TTCACCGAGAAGACTACCAGTCGCTGCTGGCACCACTaGTCGAAGAAGCGGCTGAACTCAGCCCAAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTEKTTSRCWHH*SKKRLNSAQEK Trigger: CTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGGTAGTCTTCTCGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 |
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| CDS TCA 72 bp | CCAGTCGCTGCTGGCACCACTTGTCGAAGAAGCGGCTaGACTCAGCCCAAGAGAAGAAAGTTCGATCCAACA | + |
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Preference number: 6 (lower is better) Translates to: PVAAGTTCRRSG*TQPKRRKFDPT Trigger: TGTTGGATCGAACTTTCTTCTCTTGGGCTGAGTTCAGCCGCTTCTTCGACAAGTGGTGCCAGCAGCGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 ENSMUST00000119558.9 ENSMUST00000144470.2 |
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| CDS TCA 72 bp | CGCGATGTTAGAAGGAACACAGTCTCTACCATTGCTTaGTCCTCCACGAACACCAGCTTCACCTTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RDVRRNTVSTIA*SSTNTSFTLAS Trigger: GGAGGCCAAGGTGAAGCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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| CDS CAA 72 bp | TGGTGCGCGATGTTAGAAGGAACACAGTCTCTACCATaGCTTGATCCTCCACGAACACCAGCTTCACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WCAMLEGTQSLP*LDPPRTPASPW Trigger: CCAAGGTGAAGCTGGTGTTCGTGGAGGATCAAGCAATGGTAGAGACTGTGTTCCTTCTAACATCGCGCACCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108532.11 ENSMUST00000119139.10 |
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