Pregenerated sensors for ZSWIM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033948Ensembl transcript IDs: ENSMUST00000044823.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTCAGCTAGCAAGAGACTAAGGGACGGATGGGCAAGAGAGAGTTaGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: CSASKRLRDGWARES*RKAHSCRASSVKTL Trigger: CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCTTGCCCATCCGTCCCTTAGTCTCTTGCTAGCTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACAGGATATAGGGGCGTaGGGTGACATGTTGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KLGRARLKEYQPQPPSELQDIGA*GDMLWG Trigger: CCCCCACAACATGTCACCTCACGCCCCTATATCCTG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGAGCTCAGCGGCTTCCTaGACCTTCGTCTTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVLRAEGHVLRNVFAERRSSAAS*TFVFSL Trigger: CAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCT...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR CCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAAGGCAGGAATACTaGCGAATGTCAGACTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KLGRARLKEYQPQPPSELPRQEY*RMSDSS Trigger: GGAAGAGTCTGACATTCGCCAGTATTCCTGCCTTGG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR TCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTACTGTAGAGCTGGAGTaGGAAGCTTGCCAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ETCLLREGKQRRHRMHNSTVELE*EACQGR Trigger: CCTGCCTTGGCAAGCTTCTCACTCCAGCTCTACAGT...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR GCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACACAGCTACTTTAAGTaGCCGTCAAATCAGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: KLGRARLKEYQPQPPSELHSYFK*PSNQSR Trigger: CCGACTCTGATTTGACGGGCACTTAAAGTAGCTGTG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGCCTTCGTCTTCTCCCTaGACTTGTTATTCAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PVLRAEGHVLRNVFAERRPSSSP*TCYSGV Trigger: AACACCTGAATAACAAGTGCAGGGAGAAGACGAAGG...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR CCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACATAAAGACACATCATaGTCAGCAGGCATACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KLGRARLKEYQPQPPSELHKDTS*SAGIPS Trigger: TGAAGGTATGCCTGCTGACCATGATGTGTCTTTATG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCGTCCATTTTTCTCCCTaGCGCCCCCACTTATCCACT | + |
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Preference number: 2 (lower is better) Translates to: SNTCHTINRTDTGMHTCIVHFSP*RPHLST Trigger: AGTGGATAAGTGGGGGCGGCAGGGAGAAAAATGGAC...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCCCCCCACTTATCCACTaGCAACAGCATATACTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SNTCHTINRTDTGMHTCIPPLIH*QQHILC Trigger: ACAGAGTATATGCTGTTGGCAGTGGATAAGTGGGGG...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR TCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTCTAAACATGAAGACATaGGTACACTTAACACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: ETCLLREGKQRRHRMHNSLNMKT*VHLTLR Trigger: CCTAAGTGTTAAGTGTACTCATGTCTTCATGTTTAG...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR CCA 72 bp | AGCAAGAGACTAAGGGACGGATGGGCAAGAGAGAGTTaGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SKRLRDGWARES*RKAHSCRASSV Trigger: CACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCTTGCCCATCCGTCCCTTAGTCTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGGTCTTCTCCCTGCACTaGTTATTCAGGTGTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: GRARLKEYQPQPPSELPMVFSLH*LFRCSS Trigger: TGATGAACACCTGAATAACAAGTGCAGGGAGAAGAC...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR CCA 72 bp | CCAGAGCAGATGTATCTTGTAAGCTCAGCGGCTTCCTaGACCTTCGTCTTCTCCCTGCACTTGTTATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEQMYLVSSAAS*TFVFSLHLLFR Trigger: CCTGAATAACAAGTGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR TCA 72 bp | GGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTaGGCTACCAATGAGATTATGATGAGAGTAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GKAKGIPASASE*ATNEIMMRVGR Trigger: TCTGCCTACTCTCATCATAATCTCATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGTGCACACGTGTATCTTaGTACACAGACACATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: RESWRKAHSCRASSVKTLCTRVS*YTDTCS Trigger: TGAACATGTGTCTGTGTACAAAGATACACGTGTGCA...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR CCA 72 bp | CCTATCTTCAGGCCACAGTTTCTGACATATAAGACTTaGATTTTAACTGTCCATTTTTCTCCCTGCCGCCCC | + |
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Preference number: 3 (lower is better) Translates to: PIFRPQFLTYKT*ILTVHFSPCRP Trigger: GGGGCGGCAGGGAGAAAAATGGACAGTTAAAATCCAAGTCTTATATGTCAGAAACTGTGGCCTGAAGATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR CCA 72 bp | ACTACACGTAGAGACCACTCGCATAAAGACACATCATaGTCAGCAGGCATACCTTCAGAGACAAACATGTTT | + |
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Preference number: 3 (lower is better) Translates to: TTRRDHSHKDTS*SAGIPSETNMF Trigger: AAACATGTTTGTCTCTGAAGGTATGCCTGCTGACCATGATGTGTCTTTATGCGAGTGGTCTCTACGTGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| 3UTR GCA 72 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATaGACACGTGTATCTTTGTACACAGACACATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: THVTQLTELTQA*TRVSLYTDTCS Trigger: TGAACATGTGTCTGTGTACAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGGCGGCCTGGGATGCCTaGCAGGCCTGGGGCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GRARLKEYQPQPPSELPMAAWDA*QAWGSH Trigger: GTGACTGCCCCAGGCCTGGCAGGCATCCCAGGCCGC...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCACTTCTCCGAGGCCGCTaGAGGGGCCTCCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPALLRGR*RGLPPA Trigger: TGCTGGAGGGAGGCCCCTTCAGCGGCCTCGGAGAAG...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCATGTCCAGCAGACGGATaGCCCGGCGGAACGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPACPADG*PGGTAA Trigger: GGCTGCCGTTCCGCCGGGGCATCCGTCTGCTGGACA...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGAAGAGCACAGCCTCTTaGCCGGAGAGATCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRARLKEYQPQPPSELPMKSTAS*PERSAA Trigger: CGCCGCCGATCTCTCCGGCCAAGAGGCTGTGCTCTT...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCAGATGCCTGCCAGGCCTaGGGCAGTCACTGTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPADACQA*GSHCAP Trigger: CGGTGCACAGTGACTGCCCCAGGCCTGGCAGGCATC...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGACCACAGACACCATGTaGTGGGGGTGGGACGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GRARLKEYQPQPPSELPMTTDTM*WGWDVS Trigger: CGACACGTCCCACCCCCATCACATGGTGTCTGTGGT...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGGGGCCGCCCCGGTACTaGAAGCTGGAGTACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: RESWRKAHSCRASSVKTLGPPRY*KLEYMQ Trigger: CTGCATGTACTCCAGCTTCCAGTACCGGGGCGGCCC...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCGTCCCGCGGGGGTGGTaGGCTTGCGGGCTGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACVPRGW*ACGLGQ Trigger: TTGGCCCAGCCCGCAAGCTCACCACCCCCGCGGGAC...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGTCCAGCTGCAGTTCCTaGAGTTGGCTCAGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RESWRKAHSCRASSVKTLSSCSS*SWLRSC Trigger: GCAACTCCTGAGCCAACTCCAGGAACTGCAGCTGGA...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGCCATGGCTGGTTCCGTaGCTGTGCCACTCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: PVLRAEGHVLRNVFAERRPWLVP*LCHSDG Trigger: TCCATCTGAGTGGCACAGTCACGGAACCAGCCATGG...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGTGGGGCTTTGTCTGTTaGCATGAGCTTTCCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RESWRKAHSCRASSVKTLWGFVC*HELSGA Trigger: AGCTCCGGAAAGCTCATGTCAACAGACAAAGCCCCA...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GGTAGACAGATGTTTCAGAGTCCTTGTCCTGACCTGGAAGCTCAGGCTGCCCTATGTAGGTGGCTGTCCTaGCAATGCAACTCACGACCT | + |
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Preference number: 4 (lower is better) Translates to: GRQMFQSPCPDLEAQAALCRWLS*QCNSRP Trigger: AGGTCGTGAGTTGCATTGGCAGGACAGCCACCTACA...TAGGGCAGCCTGAGCTTCCAGGTCAGGACAAGGACTCTGAAACATCTGTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTTTTCCGCCACCGTCTTaGCGGCGCAGTCCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ETCLLREGKQRRHRMHNSFPPPS*RRSPAR Trigger: CCTTGCTGGACTGCGCCGCCAAGACGGTGGCGGAAA...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGGCTCCAGGGCCACGTTaGGCAGAGTGCCGTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: THVTQLTELTQACTRVSLAPGPR*AECRLC Trigger: GCACAGACGGCACTCTGCTCAACGTGGCCCTGGAGC...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTAGGAAGCTGGAGTACATaGAGATCTCCCGCTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: KLGRARLKEYQPQPPSELGSWST*RSPAHS Trigger: GGAATGAGCGGGAGATCTGCATGTACTCCAGCTTCC...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCATGCACTTGTCTGTCATaGTTGTTCCTTGCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPACTCLS*LFLAAS Trigger: GGAGGCAGCAAGGAACAAGCATGACAGACAAGTGCA...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGTCTAGCTGCCGCTGCTaGTGCAACCTCAGAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: RESWRKAHSCRASSVKTLSSCRC*CNLRVL Trigger: TAATACTCTGAGGTTGCAGCAGCAGCGGCAGCTAGA...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTAAGCTCATCATCCAGCTaGAGTTCCTGGAGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLGRARLKEYQPQPPSELSSSSS*SSWSWL Trigger: GAGCCAACTCCAGGAACTGCAGCTGGATGATGAGCT...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCTCCAGCAGTAAGATaGACTGTTTGCGCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KLGRARLKEYQPQPPSELPPAVR*TVCAGS Trigger: AGACCCTGCGCAAACAGTGCATCTTACTGCTGGAGG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCATACTTTGCAAAGGTGTaGATGGGAACACTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPAYFAKV*MGTLSR Trigger: CCGGGAGAGTGTTCCCATGCACACCTTTGCAAAGTA...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGAAGTTTGACCTGGTCTaGTTTCCGGATCCGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RESWRKAHSCRASSVKTLKFDLV*FPDPVE Trigger: CTCTACCGGATCCGGAAACCAGACCAGGTCAAACTT...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCACTTGTAAGACAGGTCTaGATCATGAGGCAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPALVRQV*IMRQQS Trigger: GCTCTGCTGCCTCATGATCCAGACCTGTCTTACAAG...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACAGCGAGGATAGCGGCTaGGTACCACAGACACCATGT | + |
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Preference number: 4 (lower is better) Translates to: KAGILANVRLFPSLGLWYSEDSG*VPQTPC Trigger: ACATGGTGTCTGTGGTACCCAGCCGCTATCCTCGCT...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACTGGCAAACATTGAGTTaGGCTGCTTCCCAGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KAGILANVRLFPSLGLWYWQTLS*AASQSH Trigger: ATGGCTCTGGGAAGCAGCTCAACTCAATGTTTGCCA...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCCTAAGTGTCCGAGCGTaGACCAGCGAGGATAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACLSVRA*TSEDSG Trigger: GCCGCTATCCTCGCTGGTTCACGCTCGGACACTTAG...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCCTAGTGAGGCCAGCTTaGAGGCACGTAGCGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACLVRPA*RHVAGS Trigger: GCTACCCGCTACGTGCCTTCAAGCTGGCCTCACTAG...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACAACCTTGTAAGTCACTaGTGGCTCAGAAGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KAGILANVRLFPSLGLWYNLVSH*WLRSHG Trigger: GCCATGGCTTCTGAGCCAGCAGTGACTTACAAGGTT...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCAATTATTCGTTGTAGGTaGCTGTCCTGCCAATGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPAIIRCR*LSCQCN Trigger: GTTGCATTGGCAGGACAGCCACCTACAACGAATAAT...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACGCACAGGTAACCTCATaGCGCGTAAGGCTAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGILANVRLFPSLGLWYAQVTS*RVRLTC Trigger: ACAAGTTAGCCTTACGCGCCATGAGGTTACCTGTGC...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AAACTAGGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACACATCATTGATGGCTaGATGGGTGTCCTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLGRARLKEYQPQPPSELHIIDG*MGVLVV Trigger: TACAACCAGGACACCCATCCAGCCATCAATGATGTG...TAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCCTAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | GCAGATGTATCTTGTAAGCTCAGCGGCTTCCTGGACCTTCGTCTTCTCCCTGCACTGGAAAAGGGTTTCTaGGATAGGAAGACGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ADVSCKLSGFLDLRLLPALEKGF*DRKTKF Trigger: AAACTTCGTCTTCCTATCTCAGAAACCCTTTTCCAG...TGCAGGGAGAAGACGAAGGTCCAGGAAGCCGCTGAGCTTACAAGATACATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTATCTCTAGCTGCCGCTaGTGCTGCAACCTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETCLLREGKQRRHRMHNSISSCR*CCNLRV Trigger: TACTCTGAGGTTGCAGCAGCAGCGGCAGCTAGAGAT...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTCTCTCTGTTGTCCCATaGCCATCAGAGCAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCLLREGKQRRHRMHNSLSVVP*PSEQPP Trigger: TGGAGGTTGCTCTGATGGGCATGGGACAACAGAGAG...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCCTGGGGCAGTCACTGTaGACCGACGCAGGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACLGQSL*TDAGYQ Trigger: CTGATATCCTGCGTCGGTGCACAGTGACTGCCCCAG...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GGTAGACAGATGTTTCAGAGTCCTTGTCCTGACCTGGAAGCTCAGGCTGCCCTATGGTCCCTGTTCATCTaGAAAAGGGTTTCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GRQMFQSPCPDLEAQAALWSLFI*KRVSEI Trigger: TATCTCAGAAACCCTTTTCCAGATGAACAGGGACCA...TAGGGCAGCCTGAGCTTCCAGGTCAGGACAAGGACTCTGAAACATCTGTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGATAAACTTCTGTAGCTaGTCCCTGTTCATCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRARLKEYQPQPPSELPMINFCS*SLFIWK Trigger: TTTCCAGATGAACAGGGACCAGCTACAGAAGTTTAT...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACTCTGAGAGCCTCTTTTaGATACCCATGAGATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAGILANVRLFPSLGLWYSESLF*IPMRSQ Trigger: CTGCGATCTCATGGGTATCCAAAAGAGGCTCTCAGA...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTTGCAGTTCCTGGAGTTaGCTCAGGAGTTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCLLREGKQRRHRMHNSCSSWS*LRSCSS Trigger: TGAGGAGCAACTCCTGAGCCAACTCCAGGAACTGCA...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGAGATGGAAGCCGACTTaGAGCACGTTCTCCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: THVTQLTELTQACTRVSLRWKPT*STFSTE Trigger: CTCCGTGGAGAACGTGCTTCAAGTCGGCTTCCATCT...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGTGCATCGATCAAAGCTaGTGGCAACCTTGTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLRAEGHVLRNVFAERRCIDQS*WQPCKS Trigger: TGACTTACAAGGTTGCCATCAGCTTTGATCGATGCA...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGAGCACTGTGGCACAGTaGACACTCTTCACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THVTQLTELTQACTRVSLSTVAQ*TLFTTR Trigger: CCTGGTGGTGAAGAGTGTGCACTGTGCCACAGTGCT...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCCCCGGTACTGGAAGCTaGAGTACATGCAGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACPGTGS*STCRSP Trigger: GGGAGATCTGCATGTACTCCAGCTTCCAGTACCGGG...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCCTCAGAAGCCATGGCTaGTTCCGTGACTGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SNTCHTINRTDTGMHTCILRSHG*FRDCAT Trigger: AGTGGCACAGTCACGGAACCAGCCATGGCTTCTGAG...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR TCA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGGCTTTCATTCATATCTaGCATCTCCATGTAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRAEGHVLRNVFAERRAFIHI*HLHVAV Trigger: GACAGCTACATGGAGATGTCAGATATGAATGAAAGC...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCCTTGTAAGTCACTGCTaGCTCAGAAGCCATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTCHTINRTDTGMHTCILVSHC*LRSHGW Trigger: CCAGCCATGGCTTCTGAGCCAGCAGTGACTTACAAG...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCTGTTTGCGCAGGGTCTaGACTAGCTCATCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACCLRRV*TSSSSS Trigger: GCTGGATGATGAGCTAGTCCAGACCCTGCGCAAACA...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGTTGCAAAGGTGTGCATaGGAACACTCTCCCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THVTQLTELTQACTRVSLLQRCA*EHSPGG Trigger: TCCACCGGGAGAGTGTTCCCATGCACACCTTTGCAA...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | GAAACGTGTTTGCTGAGAGAAGGTAAACAGAGGAGGCACAGGATGCATAACAGTCTCCACTTCTGCAGTTaGTGGAGCCAACAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETCLLREGKQRRHRMHNSLHFCS*WSQQDF Trigger: AAAATCTTGTTGGCTCCAGCAACTGCAGAAGTGGAG...ACTGTTATGCATCCTGTGCCTCCTCTGTTTACCTTCTCTCAGCAAACACGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGGTAAGATGCACTGTTTaGGCAGGGTCTGGACTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: THVTQLTELTQACTRVSLVRCTV*AGSGLA Trigger: AGCTAGTCCAGACCCTGCGCAAACAGTGCATCTTAC...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCATGAGGGAGGGAGAATaGATGTGCTTCTGTATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACMREGE*MCFCIA Trigger: AGCGATACAGAAGCACATCCATTCTCCCTCCCTCAT...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR GCA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCGGATCAGCCATAAATTaGTCAGTGATAAGTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSLTHVTQLTELTQACGSAIN*SVISVS Trigger: GCTGACACTTATCACTGAGCAATTTATGGCTGATCC...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS CCA 90 bp | CGCGGGGGTGGTGAGCTTGCGGGCTGGGCCAAGAGCACAGCCTCTTaGCCGGAGAGATCGGCGGCGGCGAAAGCAGCTCCTCTCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGGGELAGWAKSTAS*PERSAAAKAAPLAH Trigger: GTGAGCGAGAGGAGCTGCTTTCGCCGCCGCCGATCTCTCCGGCCAAGAGGCTGTGCTCTTGGCCCAGCCCGCAAGCTCACCACCCCCGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS TCA 90 bp | TGGTTGCATCCAGTAGCTGGCGCAGTGGGGCTTTGTCTGTTGACATaGGCTTTCCGGAGCTGCGGCGGCCTGGGATGCCTGCCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLHPVAGAVGLCLLT*AFRSCGGLGCLPGL Trigger: CAGGCCTGGCAGGCATCCCAGGCCGCCGCAGCTCCGGAAAGCTCATGTCAACAGACAAAGCCCCACTGCGCCAGCTACTGGATGCAACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS CCA 90 bp | GCTGATGGCAACCTTGTAAGTCACTGCTGGCTCAGAAGCCATGGCTaGTTCCGTGACTGTGCCACTCAGATGGAAGCCGACTTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLVSHCWLRSHG*FRDCATQMEADLKH Trigger: GTGCTTCAAGTCGGCTTCCATCTGAGTGGCACAGTCACGGAACCAGCCATGGCTTCTGAGCCAGCAGTGACTTACAAGGTTGCCATCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS TCA 90 bp | CAACCTTGTAAGTCACTGCTGGCTCAGAAGCCATGGCTGGTTCCGTaGCTGTGCCACTCAGATGGAAGCCGACTTGAAGCACGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPCKSLLAQKPWLVP*LCHSDGSRLEARSP Trigger: TGGAGAACGTGCTTCAAGTCGGCTTCCATCTGAGTGGCACAGTCACGGAACCAGCCATGGCTTCTGAGCCAGCAGTGACTTACAAGGTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | GGTAGACAGATGTTTCAGAGTCCTTGTCCTGACCTGGAAGCTCAGGCTGCCCTAATAGGAAGACGAAGTTaGACCTGGTCTGGTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQMFQSPCPDLEAQAALIGRRS*TWSGFR Trigger: CCGGAAACCAGACCAGGTCAAACTTCGTCTTCCTAT...TAGGGCAGCCTGAGCTTCCAGGTCAGGACAAGGACTCTGAAACATCTGTCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | GGTAGACAGATGTTTCAGAGTCCTTGTCCTGACCTGGAAGCTCAGGCTGCCCTATTGGCAAACATTGAGTaGAGCTGCTTCCCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRQMFQSPCPDLEAQAALLANIE*SCFPEP Trigger: TGGCTCTGGGAAGCAGCTCAACTCAATGTTTGCCAA...TAGGGCAGCCTGAGCTTCCAGGTCAGGACAAGGACTCTGAAACATCTGTCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | AAGGCAGGAATACTGGCGAATGTCAGACTCTTCCCATCCTTAGGTCTGTGGTACCTCTGGGAGAGCGCATaGGTAATGTTGGGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGILANVRLFPSLGLWYLWESA*VMLGSS Trigger: TGAGCTGCCCAACATTACCAATGCGCTCTCCCAGAG...GTACCACAGACCTAAGGATGGGAAGAGTCTGACATTCGCCAGTATTCCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTTCCGCCACCGTCTaGGCGGCGCAGTCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNTCHTINRTDTGMHTCIFSATV*AAQSSK Trigger: CTTGCTGGACTGCGCCGCCAAGACGGTGGCGGAAAA...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTAAGAGCAGAGGGACACGTGCTTAGAAACGTGTTTGCTGAGAGAAGGCAGAGCTGCCTGCACTaGTCTGTCATGCTTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLRAEGHVLRNVFAERRQSCLH*SVMLVP Trigger: AGGAACAAGCATGACAGACAAGTGCAGGCAGCTCTG...CCTTCTCTCAGCAAACACGTTTCTAAGCACGTGTCCCTCTGCTCTTAAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGTTGGCGGAAGGCACACTCATGCAGAGCCTCAAGTGTGAAGACACTGAATGAATTGGGCAAATaGCAAGTGACCATCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RESWRKAHSCRASSVKTLNELGK*QVTILG Trigger: CCCCAGGATGGTCACTTGCAATTTGCCCAATTCATT...CAGTGTCTTCACACTTGAGGCTCTGCATGAGTGTGCCTTCCGCCAACTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCCAGATGGAAGCCGACTaGAAGCACGTTCTCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNTCHTINRTDTGMHTCIQMEAD*KHVLHG Trigger: TCCGTGGAGAACGTGCTTCAAGTCGGCTTCCATCTG...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGGCAAGGCTAAAGGAATACCAGCCTCAGCCTCCGAGTGAGCTACCAATGCCTTTGTATATCTGTTaGAGGTTGTCAATGAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRARLKEYQPQPPSELPMPLYIC*RLSMNW Trigger: CCAATTCATTGACAACCTCAAACAGATATACAAAGG...CATTGGTAGCTCACTCGGAGGCTGAGGCTGGTATTCCTTTAGCCTTGCCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | ACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTTTGTGGCGCAGTGGGGCTTaGTCTGTTGACATGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: THVTQLTELTQACTRVSLWRSGA*SVDMSF Trigger: AAAGCTCATGTCAACAGACAAAGCCCCACTGCGCCA...CAAAGATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | ATGAAACCCAGTCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCAGCATCTCTCGAACCTaGGCAAACATTGAGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKPSLTHVTQLTELTQACSISRT*ANIELS Trigger: GCTCAACTCAATGTTTGCCAAGGTTCGAGAGATGCT...GCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGACTGGGTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCCTGAGAACAGATACTTaGCAAAGGTGTGCATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SNTCHTINRTDTGMHTCILRTDT*QRCAWE Trigger: TTCCCATGCACACCTTTGCAAAGTATCTGTTCTCAG...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS-3UTR CAA 90 bp | TCTAACACATGTCACACAATTAACAGAACTGACACAGGCATGCACACGTGTATCTGGATCAGCCATAAATaGCTCAGTGATAAGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNTCHTINRTDTGMHTCIWISHK*LSDKCQ Trigger: CTGACACTTATCACTGAGCAATTTATGGCTGATCCA...GATACACGTGTGCATGCCTGTGTCAGTTCTGTTAATTGTGTGACATGTGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS GCA 72 bp | GCACGTTCTCCACGGAGCCGCTGTCCAGCAGACGGATaGCCCGGCGGAACGGCAGCCCCTCGCCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSPRSRCPADG*PGGTAAPRRRR Trigger: GCGGCGGCGGCGAGGGGCTGCCGTTCCGCCGGGGCATCCGTCTGCTGGACAGCGGCTCCGTGGAGAACGTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS CAA 72 bp | GCCGGCTGCCCCGGGAGTCCCGCGGGGGTGGTGAGCTaGCGGGCTGGGCCAAGAGCACAGCCTCTTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AGCPGSPAGVVS*RAGPRAQPLGR Trigger: CCGGCCAAGAGGCTGTGCTCTTGGCCCAGCCCGCAAGCTCACCACCCCCGCGGGACTCCCGGGGCAGCCGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS CCA 72 bp | CCACCCGCTCGTACGCCCACTTTTCCGCCACCGTCTTaGCGGCGCAGTCCAGCAAGGACTCCGGCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPARTPTFPPPS*RRSPARTPAAG Trigger: ACCTGCAGCCGGAGTCCTTGCTGGACTGCGCCGCCAAGACGGTGGCGGAAAAGTGGGCGTACGAGCGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS CAA 72 bp | TCCACCCGCTCGTACGCCCACTTTTCCGCCACCGTCTaGGCGGCGCAGTCCAGCAAGGACTCCGGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STRSYAHFSATV*AAQSSKDSGCR Trigger: CCTGCAGCCGGAGTCCTTGCTGGACTGCGCCGCCAAGACGGTGGCGGAAAAGTGGGCGTACGAGCGGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS TCA 72 bp | CCAGTAGCTGGCGCAGTGGGGCTTTGTCTGTTGACATaGGCTTTCCGGAGCTGCGGCGGCCTGGGATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVAGAVGLCLLT*AFRSCGGLGCL Trigger: CAGGCATCCCAGGCCGCCGCAGCTCCGGAAAGCTCATGTCAACAGACAAAGCCCCACTGCGCCAGCTACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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| CDS TCA 72 bp | AAGTCACTGCTGGCTCAGAAGCCATGGCTGGTTCCGTaGCTGTGCCACTCAGATGGAAGCCGACTTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSLLAQKPWLVP*LCHSDGSRLEA Trigger: TGCTTCAAGTCGGCTTCCATCTGAGTGGCACAGTCACGGAACCAGCCATGGCTTCTGAGCCAGCAGTGACTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044823.4 |
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