Pregenerated sensors for ZSWIM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045822Ensembl transcript IDs: ENSMUST00000052107.5
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAATGAACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATaGGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCG | + |
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Preference number: 1 (lower is better) Translates to: NNEQGVYRTPKVGLK*GRVKGLSQWSPSPP Trigger: CGGGGGAGAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGTTCATTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR TCA 90 bp | AAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATaGACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGG | + |
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Preference number: 1 (lower is better) Translates to: KGACPFIWNNFGFEQ*TRCLQNAKGRAEMR Trigger: CCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGTCTGACCCACCACTTTaGACTGTCCCAAGGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TRCLQNAKGRAEMRQGQRSDPPL*TVPRWF Trigger: GAACCACCTTGGGACAGTTCAAAGTGGTGGGTCAGA...CCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTTAGCATGCCCTTTCATATaGAATAACTTTGGCTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: LLPLCLWTQSSFPGPLCLACPFI*NNFGFE Trigger: TTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGC...TAAACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR TCA 72 bp | CAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATaGGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: QGVYRTPKVGLK*GRVKGLSQWSP Trigger: GGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR TCA 72 bp | ATACGTAACAGGTATTTTCTAAAGAGCAGCAACAGTTaGCAATCAAGGGCTACCCTCCTCCCCCTCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IRNRYFLKSSNS*QSRATLLPLCL Trigger: GAGACAGAGGGGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTGTTACGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| 3UTR TCA 72 bp | TGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATaGACAAGGTGTCTACAGAACGCCAAAGGTAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: CPFIWNNFGFEQ*TRCLQNAKGRA Trigger: AGCCCTACCTTTGGCGTTCTGTAGACACCTTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTTAGCGCTCCTCCAGCTCTaGCCCCTCGGTCTGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPLCLWTQSSFPGPLCLALLQL*PLGLHQ Trigger: CTGATGCAGACCGAGGGGCCAGAGCTGGAGGAGCGC...TAAACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTTGCTGCTCTGGAAGCTaGGTCGGTCTAGGTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSSPSVSGHKAPFRAHCVCCSGS*VGLGLG Trigger: GCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCA...AACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | GCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGACCGGCAGCACACCATaGCTTCCCCTACTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AEMRQGQRIVTVESLSPETGSTP*LPLLAA Trigger: AGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGT...CTCGGGGGAGAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTCTTGCAGCTCCCCATTaGGGTCAAGGAGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSSPSVSGHKAPFRAHCVLAAPH*GQGGAG Trigger: ACCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAG...AACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTGTTGAAAGGAGCAGCTaGAGCTACAGCCATCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PSSPSVSGHKAPFRAHCVVERSS*SYSHLC Trigger: GCAAAGATGGCTGTAGCTGCAGCTGCTCCTTTCAAC...AACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | GCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGATGATTCCACGGTCTTaGAGCTCCCCATTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: AEMRQGQRIVTVESLSPEMIPRS*SSPLGS Trigger: TGACCCCAATGGGGAGCTGCAAGACCGTGGAATCAT...CTCGGGGGAGAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTCAGCTGATAGGGGTCTaGCCAGATGTCCACAATCTT | + |
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Preference number: 4 (lower is better) Translates to: PSSPSVSGHKAPFRAHCVQLIGV*PDVHNL Trigger: AAGATTGTGGACATCTGGGCAGACCCCTATCAGCTG...AACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCGGCTGGTGCCCACACTaGAGGAGGCCATTGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPGWCPH*RRPLSP Trigger: AGGGCTCAATGGCCTCCTTCAGTGTGGGCACCAGCC...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | GCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTGACACCTTGCTGGTaGCTATGTCTAGGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AEMRQGQRIVTVESLSPELTPCW*LCLGCP Trigger: TGGACAGCCTAGACATAGTCACCAGCAAGGTGTCAA...CTCGGGGGAGAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | TTTATCCTAACCTGGGCAAGGGTTCGTCTGTGTAGGCTGGGAAGAAAGGAGCATGGCAGCCCACGTCTCTaGAGTCAACTGGCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FILTWARVRLCRLGRKEHGSPRL*SQLAAD Trigger: GTCAGCAGCCAGTTGACTTCAGAGACGTGGGCTGCC...ATGCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | TTTATCCTAACCTGGGCAAGGGTTCGTCTGTGTAGGCTGGGAAGAAAGGAGCATTCTGGCCCCTCGGTCTaGATCAGCAGGTTTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FILTWARVRLCRLGRKEHSGPSV*ISRFAS Trigger: GCTGGCAAACCTGCTGATGCAGACCGAGGGGCCAGA...ATGCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCAGGCTTCTTGGGCCTTaGAGGCGTGCTTGGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGLSQWSPSPPSFKIFLARLLGP*RRAWEP Trigger: CGGCTCCCAAGCACGCCTCCAAGGCCCAAGAAGCCT...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCAATCTTGCGCAGGGTaGAGCAGCGCTCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KGLSQWSPSPPSFKIFLAQSCAG*SSAPPA Trigger: AGCTGGAGGAGCGCTGCTCCACCCTGCGCAAGATTG...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | GCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGCTCCTGTTCTGGATTTaGGGGCTTGTGTATCTTATC | + |
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Preference number: 4 (lower is better) Translates to: AEMRQGQRIVTVESLSPELLFWI*GLVYLI Trigger: GATAAGATACACAAGCCCTCAAATCCAGAACAGGAG...CTCGGGGGAGAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | GGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCTTGGGTCAAGGAGGTGCTaGTATTTCTTCTGCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: GLSQWSPSPPSFKIFLALGSRRC*YFFCHR Trigger: CCGGTGGCAGAAGAAATACCAGCACCTCCTTGACCC...AAGGGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCGGGCCTGGAGGAAACTaGAGAGTTCCTCATCTAGTA | + |
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Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLGPGGN*RVPHLV Trigger: TACTAGATGAGGAACTCTTCAGTTTCCTCCAGGCCC...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | ACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGTTCCCGAAAGAGGCTTaGCACCTTGCTGGTGACTAT | + |
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Preference number: 4 (lower is better) Translates to: TRCLQNAKGRAEMRQGQRFPKEA*HLAGDY Trigger: ATAGTCACCAGCAAGGTGTCAAGCCTCTTTCGGGAA...CCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | TTTATCCTAACCTGGGCAAGGGTTCGTCTGTGTAGGCTGGGAAGAAAGGAGCATCCACAAAGTGAAGGATaGAGTCCAGCAGAGACCGCT | + |
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Preference number: 4 (lower is better) Translates to: FILTWARVRLCRLGRKEHPQSEG*SPAETA Trigger: AGCGGTCTCTGCTGGACTGCATCCTTCACTTTGTGG...ATGCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCAGATGTCCACAATCTTaGGCAGGGTGGAGCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPRCPQS*AGWSSA Trigger: AGCGCTGCTCCACCCTGCGCAAGATTGTGGACATCT...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | GGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCTTTACAGAATATGGCCCTaGCTGTTTTCCACCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GLSQWSPSPPSFKIFLALYRIWP*LFSTRC Trigger: GCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTA...AAGGGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | ACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGTCACAGGAGAACCAATaGGCCTGGAGGAAACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TRCLQNAKGRAEMRQGQRSQENQ*AWRKLK Trigger: CTTCAGTTTCCTCCAGGCCCATTGGTTCTCCTGTGA...CCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | ACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGCCATCTTTGCTCACCTaGTGTGAGTTCTCTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TRCLQNAKGRAEMRQGQRPSLLT*CEFSSS Trigger: GCTGCTAGAGAACTCACACCAGGTGAGCAAAGATGG...CCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | TTTATCCTAACCTGGGCAAGGGTTCGTCTGTGTAGGCTGGGAAGAAAGGAGCATCCATATCAGAAGGACTaGTGCCCTCCTGTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FILTWARVRLCRLGRKEHPYQKD*CPPVLD Trigger: ATCCAGAACAGGAGGGCATCAGTCCTTCTGATATGG...ATGCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCTGTAAGATCGCTCGGTaGGGGAATGAAGGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: KGLSQWSPSPPSFKIFLACKIAR*GNEGST Trigger: TGTGGACCCTTCATTCCCTCACCGAGCGATCTTACA...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATCCAGCCTTGGAGGACTaGTCCTGGGGCTGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LGRKEHALSYGITLALNNPALED*SWGCGN Trigger: GTTGCCACAGCCCCAGGATCAGTCCTCCAAGGCTGG...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCAGCTACAGCCATCTTTaGTCACCTGGTGTGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLSYSHL*SPGVSS Trigger: AGAACTCACACCAGGTGAGCAAAGATGGCTGTAGCT...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCGGCTGCTGGCTGGTATaGAACAGAGCCAAAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: KGLSQWSPSPPSFKIFLAGCWLV*NRAKMW Trigger: CCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCC...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCGAGTTCTCCTTAACTTaGGAGCATTTGTGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLEFSLT*EHLWAS Trigger: GCTTGCCCACAAATGCTCCCAAGTTAAGGAGAACTC...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACGCCTCGTCTACCAGGTaGGTGGAATTCTGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: PLPRKTLIKILTYSLTHHASSTR*VEFCTT Trigger: GGTGGTACAGAATTCCACCCACCTGGTAGACGAGGC...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCGTCTCTGAAGTCAACTaGCTGCTGACTGGACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPVSEVN*LLTGLR Trigger: CCTGAGTCCAGTCAGCAGCCAGTTGACTTCAGAGAC...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCAGTTTTCTTCCTGTTTaGCTGCGTCCGAATACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLSFLPV*LRPNTD Trigger: GTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACT...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCCCACAAAGACCATCTTaGCCTTGGGCCAATCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPPQRPS*PWANQS Trigger: ACTCTGATTGGCCCAAGGTCAAGATGGTCTTTGTGG...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | ACAAGGTGTCTACAGAACGCCAAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGCCTTGCTTTTCAGGCTaGTCTGTGTTTGGGATGATT | + |
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Preference number: 4 (lower is better) Translates to: TRCLQNAKGRAEMRQGQRPCFSG*SVFGMI Trigger: AATCATCCCAAACACAGATCAGCCTGAAAAGCAAGG...CCTTTGACCCTGCCTCATTTCAGCCCTACCTTTGGCGTTCTGTAGACACCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCCATGTAGGTGTTACATaGATGCAGGCCCTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPHVGVT*MQALPH Trigger: GTGAGGAAGGGCCTGCATGCATGTAACACCTACATG...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCTCAGAGCCACTCTGGTaGAAGATGTCTAGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: KGLSQWSPSPPSFKIFLASEPLW*KMSSMP Trigger: TGGCATGCTAGACATCTTGCACCAGAGTGGCTCTGA...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCTTGGGGTCAAGGAGGTaGTGGTATTTCTTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPLGSRR*WYFFCH Trigger: GTGGCAGAAGAAATACCAGCACCTCCTTGACCCCAA...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCCAAAATGTGGCGGCATaGCAGATGGTAGCACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPQNVAA*QMVALL Trigger: CAACAGTGCTACCATCTGCCATGCCGCCACATTTTG...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATCTTCCACAGGGAGCCTaGTGTCACCCCCACCACAAA | + |
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Preference number: 4 (lower is better) Translates to: LGRKEHALSYGITLALNNLPQGA*CHPHHK Trigger: TTTGTGGTGGGGGTGACACCAGGCTCCCTGTGGAAG...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR CCA 90 bp | CAGGTATTTTCTAAAGAGCAGCAACAGTTGACAATCAAGGGCTACCCTCCTCCCAGTTCAGAGCCACTCTaGTGCAAGATGTCTAGCATG | + |
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Preference number: 4 (lower is better) Translates to: QVFSKEQQQLTIKGYPPPSSEPL*CKMSSM Trigger: CATGCTAGACATCTTGCACCAGAGTGGCTCTGAACT...GGGAGGAGGGTAGCCCTTGATTGTCAACTGTTGCTGCTCTTTAGAAAATACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATCGCTCGGTGAGGGAATaGAGGGTCCACAAAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRKEHALSYGITLALNNRSVRE*RVHKDH Trigger: ATGGTCTTTGTGGACCCTTCATTCCCTCACCGAGCG...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCCAGACAAATTTCACCTaGACATATAGGATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLQTNFT*TYRISS Trigger: CGAGGATATCCTATATGTGCAGGTGAAATTTGTCTG...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACAGGCTGATCTGTGTTTaGGATGATTCCACGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPRKTLIKILTYSLTHHRLICV*DDSTVL Trigger: CAAGACCGTGGAATCATCCCAAACACAGATCAGCCT...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR TCA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACGCATTAGAGTCAGCATaGATGTGCTGGGTATTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPRKTLIKILTYSLTHHALESA*MCWVFN Trigger: GTTGAATACCCAGCACATTCATGCTGACTCTAATGC...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR GCA 90 bp | GGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCTTTTCTTCCTGTTTGACTaGGTCCGAATACAGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSQWSPSPPSFKIFLALFFLFD*VRIQTN Trigger: ATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAA...AAGGGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCGTTCTTCATCACTTTTaGTATCTTGGCCATATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGRAEMRQGQRIVTVESLVLHHF*YLGHIR Trigger: TCTGATATGGCCAAGATAGCAAAAGTGATGAAGAAC...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAATCCCCTACTGGCTGCTaGCTGGTATGCAACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQSPTGC*LVCNRA Trigger: GGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGA...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAAAAGAGGTGCCGTTGTTaGGGTTATGGAAGCGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQKRCRC*GYGSGR Trigger: CCGTCCGCTTCCATAACCTCAACAACGGCACCTCTT...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAATTGAGCACAGCGAAGTaGACCACTCGACTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQLSTAK*TTRLSR Trigger: GCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAA...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAACGTCTACCAGGTGGGTaGAATTCTGTACCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQRLPGG*NSVPPP Trigger: GGGAGGTGGTACAGAATTCCACCCACCTGGTAGACG...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAACATGGCTTCCCCTACTaGCTGCTGGCTGGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQHGFPY*LLAGMQ Trigger: TTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATG...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATAGAGTCTCGTTGTATTaGAGCAGCAGATACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRKEHALSYGITLALNNRVSLY*SSRYAG Trigger: TCCAGCGTATCTGCTGCTGCAATACAACGAGACTCT...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAACTACTGGCTGCTGGCTaGTATGCAACAGAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKEHALSYGITLALNNEQLLAAG*YATEPK Trigger: TTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAG...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| 3UTR CAA 72 bp | AAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTaGAACAATGAACAAGGTGTCTACAGAACGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEHALSYGITLA*NNEQGVYRTPK Trigger: CTTTGGCGTTCTGTAGACACCTTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| 3UTR CAA 72 bp | GGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTaGGCTTTGAACAATGAACAAGGTGTCTACAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GRKEHALSYGIT*ALNNEQGVYRT Trigger: CGTTCTGTAGACACCTTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | TTGCGCAGGGTGGAGCAGCGCTCCTCCAGCTCTGGCCCCTCGGTCTaGATCAGCAGGTTTGCCAGCTCCCTGCTTAGGTCCCGAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRRVEQRSSSSGPSV*ISRFASSLLRSRIM Trigger: CATGATTCGGGACCTAAGCAGGGAGCTGGCAAACCTGCTGATGCAGACCGAGGGGCCAGAGCTGGAGGAGCGCTGCTCCACCCTGCGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | GAAGTCAACTGGCTGCTGACTGGACTCAGGCAGCTGATAGGGGTCTaGCCAGATGTCCACAATCTTGCGCAGGGTGGAGCAGCGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVNWLLTGLRQLIGV*PDVHNLAQGGAALL Trigger: GAGGAGCGCTGCTCCACCCTGCGCAAGATTGTGGACATCTGGGCAGACCCCTATCAGCTGCCTGAGTCCAGTCAGCAGCCAGTTGACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | TCTGCCACCGGCAGCACACCATGGCTTCCCCTACTGGCTGCTGGCTaGTATGCAACAGAGCCAAAATGTGGCGGCATGGCAGATGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SATGSTPWLPLLAAG*YATEPKCGGMADGS Trigger: GCTACCATCTGCCATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | AGGTCACTCATCTTGCTGCTCTGGAAGCTGAGTCGGTCTAGGTCTTaGCTGGTGCCCACACTGAAGGAGGCCATTGAGCCCTCGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RSLILLLWKLSRSRS*LVPTLKEAIEPSST Trigger: CGTGGACGAGGGCTCAATGGCCTCCTTCAGTGTGGGCACCAGCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCAAGATGAGTGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | TTCTTCTGCCACCGGCAGCACACCATGGCTTCCCCTACTGGCTGCTaGCTGGTATGCAACAGAGCCAAAATGTGGCGGCATGGCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: FFCHRQHTMASPTGC*LVCNRAKMWRHGRW Trigger: CCATCTGCCATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | CTTTCCCCAGAGGAAAGGGAGGCAGCCCACGTCTCTGAAGTCAACTaGCTGCTGACTGGACTCAGGCAGCTGATAGGGGTCTGCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSPEEREAAHVSEVN*LLTGLRQLIGVCPD Trigger: ATCTGGGCAGACCCCTATCAGCTGCCTGAGTCCAGTCAGCAGCCAGTTGACTTCAGAGACGTGGGCTGCCTCCCTTTCCTCTGGGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 90 bp | CAGCTACAGCCATCTTTGCTCACCTGGTGTGAGTTCTCTAGCAGCTaGACAGCCACTGAGGAGCCGGCCTCGTCTACCAGGTGGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLQPSLLTWCEFSSS*TATEEPASSTRWVE Trigger: TTCCACCCACCTGGTAGACGAGGCCGGCTCCTCAGTGGCTGTTCAGCTGCTAGAGAACTCACACCAGGTGAGCAAAGATGGCTGTAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | CCAGCTCTGGCCCCTCGGTCTGCATCAGCAGGTTTGCCAGCTCCCTaGTTAGGTCCCGAATCATGTGGTTCTGACCTTGCTTTTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PALAPRSASAGLPAP*LGPESCGSDLAFQA Trigger: AGCCTGAAAAGCAAGGTCAGAACCACATGATTCGGGACCTAAGCAGGGAGCTGGCAAACCTGCTGATGCAGACCGAGGGGCCAGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | CTGGTATTTCTTCTGCCACCGGCAGCACACCATGGCTTCCCCTACTaGCTGCTGGCTGGTATGCAACAGAGCCAAAATGTGGCGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLPPAAHHGFPY*LLAGMQQSQNVAAW Trigger: CCATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAGAAATACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 90 bp | AGCCTTGGAGGACTGATCCTGGGGCTGTGGCAACTGAGACTGTGCTaGGTCTGCCTTTGTCTCTTCTACCTCTTCCACAGGGAGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLGGLILGLWQLRLC*VCLCLFYLFHREPG Trigger: ACCAGGCTCCCTGTGGAAGAGGTAGAAGAGACAAAGGCAGACTCAGCACAGTCTCAGTTGCCACAGCCCCAGGATCAGTCCTCCAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | TATTTCTTCTGCCACCGGCAGCACACCATGGCTTCCCCTACTGGCTaGTGGCTGGTATGCAACAGAGCCAAAATGTGGCGGCATGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFFCHRQHTMASPTG*WLVCNRAKMWRHGR Trigger: TCTGCCATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | AGTGTCTCTGGGAATCGGGCGAACAGGTCACTCATCTTGCTGCTCTaGAAGCTGAGTCGGTCTAGGTCTTGGCTGGTGCCCACACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSGNRANRSLILLL*KLSRSRSWLVPTLK Trigger: CTTCAGTGTGGGCACCAGCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCAAGATGAGTGACCTGTTCGCCCGATTCCCAGAGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | GGTCAAGGAGGTGCTGGTATTTCTTCTGCCACCGGCAGCACACCATaGCTTCCCCTACTGGCTGCTGGCTGGTATGCAACAGAGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQGGAGISSATGSTP*LPLLAAGWYATEPK Trigger: TTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAGAAATACCAGCACCTCCTTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTCAGATGGTAGCACTGTaGAAAGGAGCAGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPSVSGHKAPFRAHCVQMVAL*KGAAAA Trigger: AGCTGCAGCTGCTCCTTTCAACAGTGCTACCATCTG...AACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 90 bp | AGGAGAGTGCGGGCAGAGGGGAAGATCTCCTGTAAGATCGCTCGGTaGGGGAATGAAGGGTCCACAAAGACCATCTTGACCTTGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRVRAEGKISCKIAR*GNEGSTKTILTLGQ Trigger: TTGGCCCAAGGTCAAGATGGTCTTTGTGGACCCTTCATTCCCTCACCGAGCGATCTTACAGGAGATCTTCCCCTCTGCCCGCACTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | ATCTTGGCCACAGAAGGCGCTGTCTCAGCCTTGAGCACAGCGAAGTaGACCACTCGACTCTCTCGCTCCTTGTTCTCCACCAAGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILATEGAVSALSTAK*TTRLSRSLFSTKKA Trigger: TGCTTTCTTGGTGGAGAACAAGGAGCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAAGGCTGAGACAGCGCCTTCTGTGGCCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | AATATGGCCCTGGCTGTTTTCCACCCGGTGCAGCAAGAGTGTCTCTaGGAATCGGGCGAACAGGTCACTCATCTTGCTGCTCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NMALAVFHPVQQECL*ESGEQVTHLAALEA Trigger: AGCTTCCAGAGCAGCAAGATGAGTGACCTGTTCGCCCGATTCCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | CTAGTTCAGAGCCACTCTGGTGCAAGATGTCTAGCATGCCAGCCTTaGAGGACTGATCCTGGGGCTGTGGCAACTGAGACTGTGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVQSHSGARCLACQP*RTDPGAVATETVLS Trigger: ACTCAGCACAGTCTCAGTTGCCACAGCCCCAGGATCAGTCCTCCAAGGCTGGCATGCTAGACATCTTGCACCAGAGTGGCTCTGAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | GCAGCTGAACAGCCACTGAGGAGCCGGCCTCGTCTACCAGGTGGGTaGAATTCTGTACCACCTCCCACTCATTATGACACAACTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAEQPLRSRPRLPGG*NSVPPPTHYDTTCR Trigger: CCTACAAGTTGTGTCATAATGAGTGGGAGGTGGTACAGAATTCCACCCACCTGGTAGACGAGGCCGGCTCCTCAGTGGCTGTTCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | GGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCTTGGCGCTGTCTCAGCCTaGAGCACAGCGAAGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLSQWSPSPPSFKIFLALGAVSA*STAKCT Trigger: GGTGCACTTCGCTGTGCTCAAGGCTGAGACAGCGCC...AAGGGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 90 bp | CCAGCAGAGACCGCTGTTCCCGAAAGAGGCTTGACACCTTGCTGGTaGCTATGTCTAGGCTGTCCATGTAGGTGTTACATGCATGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAETAVPERGLTPCW*LCLGCPCRCYMHAG Trigger: GCCTGCATGCATGTAACACCTACATGGACAGCCTAGACATAGTCACCAGCAAGGTGTCAAGCCTCTTTCGGGAACAGCGGTCTCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | CGACTCTCTCGCTCCTTGTTCTCCACCAAGAAAGCATACAGAATATaGCCCTGGCTGTTTTCCACCCGGTGCAGCAAGAGTGTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSRSLFSTKKAYRI*PWLFSTRCSKSVSG Trigger: CCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTATGCTTTCTTGGTGGAGAACAAGGAGCGAGAGAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTTACGACTCTCTCGCTCCTaGTTCTCCACCAAGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPLCLWTQSSFPGPLCLRLSRS*FSTKKA Trigger: TGCTTTCTTGGTGGAGAACAAGGAGCGAGAGAGTCG...TAAACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCAAGGCTTCTTGGGCCTaGGAGGCGTGCTTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGLSQWSPSPPSFKIFLAKASWA*EACLGA Trigger: GGCTCCCAAGCACGCCTCCAAGGCCCAAGAAGCCTT...GGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | ACCAAGAAAGCATACAGAATATGGCCCTGGCTGTTTTCCACCCGGTaGAGCAAGAGTGTCTCTGGGAATCGGGCGAACAGGTCACTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TKKAYRIWPWLFSTR*SKSVSGNRANRSLI Trigger: GATGAGTGACCTGTTCGCCCGATTCCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTATGCTTTCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | GATGGTAGCACTGTTGAAAGGAGCAGCTGCAGCTACAGCCATCTTTaGTCACCTGGTGTGAGTTCTCTAGCAGCTGAACAGCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DGSTVERSSCSYSHL*SPGVSSLAAEQPLR Trigger: CCTCAGTGGCTGTTCAGCTGCTAGAGAACTCACACCAGGTGAGCAAAGATGGCTGTAGCTGCAGCTGCTCCTTTCAACAGTGCTACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 90 bp | TCTCGCTCCTTGTTCTCCACCAAGAAAGCATACAGAATATGGCCCTaGCTGTTTTCCACCCGGTGCAGCAAGAGTGTCTCTGGGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSLFSTKKAYRIWP*LFSTRCSKSVSGNR Trigger: CCGATTCCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTATGCTTTCTTGGTGGAGAACAAGGAGCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCAAAGAGGTGCCGTTGTaGAGGTTATGGAAGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KGRAEMRQGQRIVTVESLKEVPL*RLWKRT Trigger: CGTCCGCTTCCATAACCTCAACAACGGCACCTCTTT...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCAAGAGGCTTGACACCTaGCTGGTGACTATGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGRAEMRQGQRIVTVESLKRLDT*LVTMSR Trigger: CCTAGACATAGTCACCAGCAAGGTGTCAAGCCTCTT...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | TTTATCCTAACCTGGGCAAGGGTTCGTCTGTGTAGGCTGGGAAGAAAGGAGCATCGAGTTCTCCTTAACTaGGGAGCATTTGTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FILTWARVRLCRLGRKEHRVLLN*GAFVGK Trigger: CTTGCCCACAAATGCTCCCAAGTTAAGGAGAACTCG...ATGCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | GGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAGCCCTTGTGCTGAGTCTGCCTTaGTCTCTTCTACCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSQWSPSPPSFKIFLALVLSLP*SLLPLP Trigger: TGGAAGAGGTAGAAGAGACAAAGGCAGACTCAGCAC...AAGGGCTAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACTCTGCATCAGCAGGTTaGCCAGCTCCCTGCTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPRKTLIKILTYSLTHHSASAG*PAPCLG Trigger: ACCTAAGCAGGGAGCTGGCAAACCTGCTGATGCAGA...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 90 bp | TGTACCACAGCAGTTCACAGGAGAACCAATGGGCCTGGAGGAAACTaGAGAGTTCCTCATCTAGTAGGACTTGGGACATCTCACAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTTAVHRRTNGPGGN*RVPHLVGLGTSHRD Trigger: ATCTCTGTGAGATGTCCCAAGTCCTACTAGATGAGGAACTCTTCAGTTTCCTCCAGGCCCATTGGTTCTCCTGTGAACTGCTGTGGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGGGCTGAAATGAGGCAGGGTCAAAGGATTGTCACAGTGGAGTCCCTCCCTCCTGTTCTGGATTaGAGGGCTTGTGTATCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KGRAEMRQGQRIVTVESLPPVLD*RACVSY Trigger: ATAAGATACACAAGCCCTCAAATCCAGAACAGGAGG...GAGGGACTCCACTGTGACAATCCTTTGACCCTGCCTCATTTCAGCCCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATTCTTGCAGCTCCCCATaGGGGTCAAGGAGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRKEHALSYGITLALNNSCSSP*GSRRCW Trigger: CCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAGA...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACTCCACAAAGACCATCTaGACCTTGGGCCAATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPRKTLIKILTYSLTHHSTKTI*TLGQSE Trigger: CTCTGATTGGCCCAAGGTCAAGATGGTCTTTGTGGA...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCCCCTCTGTCTCTGGACACAAAGCTCCTTTCCGGGCCCATTGTGTTTAAAGCTCTTCAGACCTTaGGTATTAAAGAAGTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LLPLCLWTQSSFPGPLCLKLFRP*VLKKSM Trigger: CATAGACTTCTTTAATACCAAAGGTCTGAAGAGCTT...TAAACACAATGGGCCCGGAAAGGAGCTTTGTGTCCAGAGACAGAGGGGGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | GTTTTCTTCCTGTTTGACTGCGTCCGAATACAGACAAATTTCACCTaGACATATAGGATATCCTCGCGGAAAGAGGTGCCGTTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFFLFDCVRIQTNFT*TYRISSRKEVPLLR Trigger: CCTCAACAACGGCACCTCTTTCCGCGAGGATATCCTATATGTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS GCA 90 bp | TACGCTGGACACCTGTCCACCTTCCGAGTTTTCTTCCTGTTTGACTaGGTCCGAATACAGACAAATTTCACCTGCACATATAGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: YAGHLSTFRVFFLFD*VRIQTNFTCTYRIS Trigger: GGATATCCTATATGTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACTCGGAAGGTGGACAGGTGTCCAGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAACAGATGTCCACAATCTaGCGCAGGGTGGAGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RKEHALSYGITLALNNEQQMSTI*RRVEQR Trigger: GCGCTGCTCCACCCTGCGCAAGATTGTGGACATCTG...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 90 bp | GTATTCAACTCACTGATAAACAGTCTATCTAGAGTCTCGTTGTATTaGAGCAGCAGATACGCTGGACACCTGTCCACCTTCCGAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFNSLINSLSRVSLY*SSRYAGHLSTFRVF Trigger: GAAAACTCGGAAGGTGGACAGGTGTCCAGCGTATCTGCTGCTGCAATACAACGAGACTCTAGATAGACTGTTTATCAGTGAGTTGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACAAGACCATCTTGACCTaGGGCCAATCAGAGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLPRKTLIKILTYSLTHHKTILT*GQSELN Trigger: ATTCAACTCTGATTGGCCCAAGGTCAAGATGGTCTT...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | GTCAAAGGATTGTCACAGTGGAGTCCCTCTCCCCCGAGTTTTAAGATCTTCTTAATCACTTTTGCTATCTaGGCCATATCAGAAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VKGLSQWSPSPPSFKIFLITFAI*AISEGL Trigger: CAGTCCTTCTGATATGGCCAAGATAGCAAAAGTGAT...TAAGAAGATCTTAAAACTCGGGGGAGAGGGACTCCACTGTGACAATCCTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTACCTAGGAAGACACTGATAAAAATACTGACCTACAGTCTGACCCACCACTTGGGCCAATCAGAGTaGAATTCTGTAAAGATATTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPRKTLIKILTYSLTHHLGQSE*NSVKIL Trigger: CAATATCTTTACAGAATTCAACTCTGATTGGCCCAA...GTGGTGGGTCAGACTGTAGGTCAGTATTTTTATCAGTGTCTTCCTAGGTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATGAACAAATTCTAAAAGGCTTCTaGGGCCTTGGAGGCGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKEHALSYGITLALNNEQILKGF*GLGGVL Trigger: AAGCACGCCTCCAAGGCCCAAGAAGCCTTTTAGAAT...TTGTTCATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAGAAAGGAGCATGCCCTTTCATATGGAATAACTTTGGCTTTGAACAATAGTTCTTCATCACTTTaGCTATCTTGGCCATATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRKEHALSYGITLALNNSSSSL*LSWPYQ Trigger: CTGATATGGCCAAGATAGCAAAAGTGATGAAGAACT...ATTGTTCAAAGCCAAAGTTATTCCATATGAAAGGGCATGCTCCTTTCTTCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 72 bp | CCACGGTCTTGCAGCTCCCCATTGGGGTCAAGGAGGTaGTGGTATTTCTTCTGCCACCGGCAGCACACCATG | + |
|
Preference number: 6 (lower is better) Translates to: PRSCSSPLGSRR*WYFFCHRQHTM Trigger: CATGGTGTGCTGCCGGTGGCAGAAGAAATACCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAGACCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CCA 72 bp | GGCAGCACACCATGGCTTCCCCTACTGGCTGCTGGCTaGTATGCAACAGAGCCAAAATGTGGCGGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSTPWLPLLAAG*YATEPKCGGMA Trigger: TGCCATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 72 bp | CACCGGCAGCACACCATGGCTTCCCCTACTGGCTGCTaGCTGGTATGCAACAGAGCCAAAATGTGGCGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HRQHTMASPTGC*LVCNRAKMWRH Trigger: ATGCCGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 72 bp | CGGTCTTGCAGCTCCCCATTGGGGTCAAGGAGGTGCTaGTATTTCTTCTGCCACCGGCAGCACACCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSCSSPLGSRRC*YFFCHRQHTMA Trigger: AGCCATGGTGTGCTGCCGGTGGCAGAAGAAATACCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | TGCAGCAAGAGTGTCTCTGGGAATCGGGCGAACAGGTCACTCATCTaGCTGCTCTGGAAGCTGAGTCGGTCTAGGTCTTGGCTGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CSKSVSGNRANRSLI*LLWKLSRSRSWLVP Trigger: GGGCACCAGCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCAAGATGAGTGACCTGTTCGCCCGATTCCCAGAGACACTCTTGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 90 bp | ACTGATCCTGGGGCTGTGGCAACTGAGACTGTGCTGAGTCTGCCTTaGTCTCTTCTACCTCTTCCACAGGGAGCCTGGTGTCACCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TDPGAVATETVLSLP*SLLPLPQGAWCHPH Trigger: GTGGGGGTGACACCAGGCTCCCTGTGGAAGAGGTAGAAGAGACAAAGGCAGACTCAGCACAGTCTCAGTTGCCACAGCCCCAGGATCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 72 bp | GCCCCTCGGTCTGCATCAGCAGGTTTGCCAGCTCCCTaGTTAGGTCCCGAATCATGTGGTTCTGACCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: APRSASAGLPAP*LGPESCGSDLA Trigger: AGCAAGGTCAGAACCACATGATTCGGGACCTAAGCAGGGAGCTGGCAAACCTGCTGATGCAGACCGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CCA 72 bp | ATCTTGCTGCTCTGGAAGCTGAGTCGGTCTAGGTCTTaGCTGGTGCCCACACTGAAGGAGGCCATTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ILLLWKLSRSRS*LVPTLKEAIEP Trigger: GGGCTCAATGGCCTCCTTCAGTGTGGGCACCAGCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 72 bp | CTTCTGCCACCGGCAGCACACCATGGCTTCCCCTACTaGCTGCTGGCTGGTATGCAACAGAGCCAAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPPAAHHGFPY*LLAGMQQSQNV Trigger: CACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CCA 72 bp | GGTGCTGGTATTTCTTCTGCCACCGGCAGCACACCATaGCTTCCCCTACTGGCTGCTGGCTGGTATGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GAGISSATGSTP*LPLLAAGWYAT Trigger: TGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGCAGAAGAAATACCAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 72 bp | TTGAGCATCTTGGCCACAGAAGGCGCTGTCTCAGCCTaGAGCACAGCGAAGTGCACCACTCGACTCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSILATEGAVSA*STAKCTTRLSR Trigger: GCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAAGGCTGAGACAGCGCCTTCTGTGGCCAAGATGCTCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CCA 72 bp | CTGGCTGTTTTCCACCCGGTGCAGCAAGAGTGTCTCTaGGAATCGGGCGAACAGGTCACTCATCTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAVFHPVQQECL*ESGEQVTHLAA Trigger: AGCAGCAAGATGAGTGACCTGTTCGCCCGATTCCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CCA 72 bp | CAGCCACTGAGGAGCCGGCCTCGTCTACCAGGTGGGTaGAATTCTGTACCACCTCCCACTCATTATGACACA | + |
|
Preference number: 6 (lower is better) Translates to: QPLRSRPRLPGG*NSVPPPTHYDT Trigger: TGTGTCATAATGAGTGGGAGGTGGTACAGAATTCCACCCACCTGGTAGACGAGGCCGGCTCCTCAGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 72 bp | CTGGTGTCACCCCCACCACAAATTCTAAAAGGCTTCTaGGGCCTTGGAGGCGTGCTTGGGAGCCGAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVSPPPQILKGF*GLGGVLGSRVL Trigger: GAGAACTCGGCTCCCAAGCACGCCTCCAAGGCCCAAGAAGCCTTTTAGAATTTGTGGTGGGGGTGACACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS TCA 72 bp | CGGGCAGAGGGGAAGATCTCCTGTAAGATCGCTCGGTaGGGGAATGAAGGGTCCACAAAGACCATCTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RAEGKISCKIAR*GNEGSTKTILT Trigger: GGTCAAGATGGTCTTTGTGGACCCTTCATTCCCTCACCGAGCGATCTTACAGGAGATCTTCCCCTCTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS TCA 72 bp | GGACTGATCCTGGGGCTGTGGCAACTGAGACTGTGCTaGGTCTGCCTTTGTCTCTTCTACCTCTTCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLILGLWQLRLC*VCLCLFYLFHR Trigger: CCTGTGGAAGAGGTAGAAGAGACAAAGGCAGACTCAGCACAGTCTCAGTTGCCACAGCCCCAGGATCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS GCA 72 bp | GGCATGGCAGATGGTAGCACTGTTGAAAGGAGCAGCTaGAGCTACAGCCATCTTTGCTCACCTGGTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GMADGSTVERSS*SYSHLCSPGVS Trigger: ACTCACACCAGGTGAGCAAAGATGGCTGTAGCTGCAGCTGCTCCTTTCAACAGTGCTACCATCTGCCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 72 bp | CTTGGAGGCGTGCTTGGGAGCCGAGTTCTCCTTAACTaGGGAGCATTTGTGGGCAAGCTCTTCAGACCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGGVLGSRVLLN*GAFVGKLFRPL Trigger: CAAAGGTCTGAAGAGCTTGCCCACAAATGCTCCCAAGTTAAGGAGAACTCGGCTCCCAAGCACGCCTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 72 bp | TTCAGGCTGATCTGTGTTTGGGATGATTCCACGGTCTaGCAGCTCCCCATTGGGGTCAAGGAGGTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FRLICVWDDSTV*QLPIGVKEVLV Trigger: TACCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAGACCGTGGAATCATCCCAAACACAGATCAGCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | GTAAAGATATTGAGCATCTTGGCCACAGAAGGCGCTGTCTCAGCCTaGAGCACAGCGAAGTGCACCACTCGACTCTCTCGCTCCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VKILSILATEGAVSA*STAKCTTRLSRSLF Trigger: GAACAAGGAGCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAAGGCTGAGACAGCGCCTTCTGTGGCCAAGATGCTCAATATCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CCA 72 bp | CGCTCCTTGTTCTCCACCAAGAAAGCATACAGAATATaGCCCTGGCTGTTTTCCACCCGGTGCAGCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLFSTKKAYRI*PWLFSTRCSKS Trigger: ACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTATGCTTTCTTGGTGGAGAACAAGGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 72 bp | ACATATAGGATATCCTCGCGGAAAGAGGTGCCGTTGTaGAGGTTATGGAAGCGGACGGAGATGCAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TYRISSRKEVPL*RLWKRTEMQSL Trigger: CAGGGACTGCATCTCCGTCCGCTTCCATAACCTCAACAACGGCACCTCTTTCCGCGAGGATATCCTATATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 72 bp | TGCACATATAGGATATCCTCGCGGAAAGAGGTGCCGTaGTTGAGGTTATGGAAGCGGACGGAGATGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTYRISSRKEVP*LRLWKRTEMQS Trigger: GGACTGCATCTCCGTCCGCTTCCATAACCTCAACAACGGCACCTCTTTCCGCGAGGATATCCTATATGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 72 bp | AGCACAGCGAAGTGCACCACTCGACTCTCTCGCTCCTaGTTCTCCACCAAGAAAGCATACAGAATATGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STAKCTTRLSRS*FSTKKAYRIWP Trigger: GGGCCATATTCTGTATGCTTTCTTGGTGGAGAACAAGGAGCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | TCAGCCTTGAGCACAGCGAAGTGCACCACTCGACTCTCTCGCTCCTaGTTCTCCACCAAGAAAGCATACAGAATATGGCCCTGGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SALSTAKCTTRLSRS*FSTKKAYRIWPWLF Trigger: AAACAGCCAGGGCCATATTCTGTATGCTTTCTTGGTGGAGAACAAGGAGCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAAGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | TTCACCTGCACATATAGGATATCCTCGCGGAAAGAGGTGCCGTTGTaGAGGTTATGGAAGCGGACGGAGATGCAGTCCCTGACAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FTCTYRISSRKEVPL*RLWKRTEMQSLTMK Trigger: CTTCATTGTCAGGGACTGCATCTCCGTCCGCTTCCATAACCTCAACAACGGCACCTCTTTCCGCGAGGATATCCTATATGTGCAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 90 bp | TTCTTGGGCCTTGGAGGCGTGCTTGGGAGCCGAGTTCTCCTTAACTaGGGAGCATTTGTGGGCAAGCTCTTCAGACCTTTGGTATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLGLGGVLGSRVLLN*GAFVGKLFRPLVLK Trigger: CTTTAATACCAAAGGTCTGAAGAGCTTGCCCACAAATGCTCCCAAGTTAAGGAGAACTCGGCTCCCAAGCACGCCTCCAAGGCCCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 72 bp | ACCGCTGTTCCCGAAAGAGGCTTGACACCTTGCTGGTaGCTATGTCTAGGCTGTCCATGTAGGTGTTACATG | + |
|
Preference number: 6 (lower is better) Translates to: TAVPERGLTPCW*LCLGCPCRCYM Trigger: CATGTAACACCTACATGGACAGCCTAGACATAGTCACCAGCAAGGTGTCAAGCCTCTTTCGGGAACAGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 72 bp | ACTGTTGAAAGGAGCAGCTGCAGCTACAGCCATCTTTaGTCACCTGGTGTGAGTTCTCTAGCAGCTGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVERSSCSYSHL*SPGVSSLAAEQ Trigger: CTGTTCAGCTGCTAGAGAACTCACACCAGGTGAGCAAAGATGGCTGTAGCTGCAGCTGCTCCTTTCAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 90 bp | AATTTCACCTGCACATATAGGATATCCTCGCGGAAAGAGGTGCCGTaGTTGAGGTTATGGAAGCGGACGGAGATGCAGTCCCTGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: NFTCTYRISSRKEVP*LRLWKRTEMQSLTM Trigger: CATTGTCAGGGACTGCATCTCCGTCCGCTTCCATAACCTCAACAACGGCACCTCTTTCCGCGAGGATATCCTATATGTGCAGGTGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 90 bp | GCCATATCAGAAGGACTGATGCCCTCCTGTTCTGGATTTGAGGGCTaGTGTATCTTATCGAGGCAAAATGACGGCTCTACTGAGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AISEGLMPSCSGFEG*CILSRQNDGSTEGF Trigger: GAAGCCCTCAGTAGAGCCGTCATTTTGCCTCGATAAGATACACAAGCCCTCAAATCCAGAACAGGAGGGCATCAGTCCTTCTGATATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 72 bp | GCAGTTCACAGGAGAACCAATGGGCCTGGAGGAAACTaGAGAGTTCCTCATCTAGTAGGACTTGGGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: AVHRRTNGPGGN*RVPHLVGLGTS Trigger: AGATGTCCCAAGTCCTACTAGATGAGGAACTCTTCAGTTTCCTCCAGGCCCATTGGTTCTCCTGTGAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS TCA 72 bp | TGGACACCTGTCCACCTTCCGAGTTTTCTTCCTGTTTaGCTGCGTCCGAATACAGACAAATTTCACCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WTPVHLPSFLPV*LRPNTDKFHLH Trigger: GTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACTCGGAAGGTGGACAGGTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS GCA 72 bp | GCCCTCGTCCACGGTAAGAAAGTTCTTCATCACTTTTaGTATCTTGGCCATATCAGAAGGACTGATGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALVHGKKVLHHF*YLGHIRRTDAL Trigger: GAGGGCATCAGTCCTTCTGATATGGCCAAGATAGCAAAAGTGATGAAGAACTTTCTTACCGTGGACGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
||
| CDS CAA 72 bp | CTGGACACCTGTCCACCTTCCGAGTTTTCTTCCTGTTaGACTGCGTCCGAATACAGACAAATTTCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LDTCPPSEFSSC*TASEYRQISPA Trigger: TGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACTCGGAAGGTGGACAGGTGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | GCAGATACGCTGGACACCTGTCCACCTTCCGAGTTTTCTTCCTGTTaGACTGCGTCCGAATACAGACAAATTTCACCTGCACATATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ADTLDTCPPSEFSSC*TASEYRQISPAHIG Trigger: TCCTATATGTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACTCGGAAGGTGGACAGGTGTCCAGCGTATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | TGCTGGGTATTCAACTCACTGATAAACAGTCTATCTAGAGTCTCGTaGTATTGCAGCAGCAGATACGCTGGACACCTGTCCACCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CWVFNSLINSLSRVS*YCSSRYAGHLSTFR Trigger: TCGGAAGGTGGACAGGTGTCCAGCGTATCTGCTGCTGCAATACAACGAGACTCTAGATAGACTGTTTATCAGTGAGTTGAATACCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | GAGCCCTCGTCCACGGTAAGAAAGTTCTTCATCACTTTTGCTATCTaGGCCATATCAGAAGGACTGATGCCCTCCTGTTCTGGATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: EPSSTVRKFFITFAI*AISEGLMPSCSGFE Trigger: CTCAAATCCAGAACAGGAGGGCATCAGTCCTTCTGATATGGCCAAGATAGCAAAAGTGATGAAGAACTTTCTTACCGTGGACGAGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | ACCATCTTGACCTTGGGCCAATCAGAGTTGAATTCTGTAAAGATATaGAGCATCTTGGCCACAGAAGGCGCTGTCTCAGCCTTGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TILTLGQSELNSVKI*SILATEGAVSALST Trigger: TGTGCTCAAGGCTGAGACAGCGCCTTCTGTGGCCAAGATGCTCAATATCTTTACAGAATTCAACTCTGATTGGCCCAAGGTCAAGATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS GCA 72 bp | TCACTGATAAACAGTCTATCTAGAGTCTCGTTGTATTaGAGCAGCAGATACGCTGGACACCTGTCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLINSLSRVSLY*SSRYAGHLSTF Trigger: GAAGGTGGACAGGTGTCCAGCGTATCTGCTGCTGCAATACAACGAGACTCTAGATAGACTGTTTATCAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 90 bp | AATGAAGGGTCCACAAAGACCATCTTGACCTTGGGCCAATCAGAGTaGAATTCTGTAAAGATATTGAGCATCTTGGCCACAGAAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: NEGSTKTILTLGQSE*NSVKILSILATEGA Trigger: AGCGCCTTCTGTGGCCAAGATGCTCAATATCTTTACAGAATTCAACTCTGATTGGCCCAAGGTCAAGATGGTCTTTGTGGACCCTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS TCA 72 bp | TCATCACTTTTGCTATCTTGGCCATATCAGAAGGACTaGTGCCCTCCTGTTCTGGATTTGAGGGCTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SSLLLSWPYQKD*CPPVLDLRACV Trigger: TACACAAGCCCTCAAATCCAGAACAGGAGGGCATCAGTCCTTCTGATATGGCCAAGATAGCAAAAGTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS GCA 72 bp | CACCTGTCCACCTTCCGAGTTTTCTTCCTGTTTGACTaGGTCCGAATACAGACAAATTTCACCTGCACATAT | + |
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Preference number: 6 (lower is better) Translates to: HLSTFRVFFLFD*VRIQTNFTCTY Trigger: ATATGTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACTCGGAAGGTGGACAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS CAA 72 bp | TTCAACTCACTGATAAACAGTCTATCTAGAGTCTCGTaGTATTGCAGCAGCAGATACGCTGGACACCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FNSLINSLSRVS*YCSSRYAGHLS Trigger: GGACAGGTGTCCAGCGTATCTGCTGCTGCAATACAACGAGACTCTAGATAGACTGTTTATCAGTGAGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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| CDS TCA 72 bp | CTAGCAGGGATTCCTCCAGAAGCATTAGAGTCAGCATaGATGTGCTGGGTATTCAACTCACTGATAAACAGT | + |
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Preference number: 6 (lower is better) Translates to: LAGIPPEALESA*MCWVFNSLINS Trigger: ACTGTTTATCAGTGAGTTGAATACCCAGCACATTCATGCTGACTCTAATGCTTCTGGAGGAATCCCTGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052107.5 |
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