Pregenerated sensors for ZSWIM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034552Ensembl transcript IDs: ENSMUST00000038223.8, ENSMUST00000152829.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGGAGATAGATGCTGCTACTCAGCGCCTGGTCTTGCTGCCAGCTaGGGCTCTCGCTTAAGTGTCTTCGCTTTTCTGAGGCTTTACAGC | + |
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Preference number: 5 (lower is better) Translates to: AGDRCCYSAPGLAAS*GSRLSVFAFLRLYS Trigger: GCTGTAAAGCCTCAGAAAAGCGAAGACACTTAAGCGAGAGCCTCAGCTGGCAGCAAGACCAGGCGCTGAGTAGCAGCATCTATCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS GCA 90 bp | CTGCTTAAGGTAGCCGTCTTCTTCCACCTGTGCAGTCTCATCACTTaGTCTAAGCTGTGGAGCTTGGACCTGATGTATCCCCCGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LLKVAVFFHLCSLIT*SKLWSLDLMYPPEQ Trigger: TTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAGGTGGAAGAAGACGGCTACCTTAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CCA 90 bp | GCCGTCTTCTTCCACCTGTGCAGTCTCATCACTTGCTCTAAGCTGTaGAGCTTGGACCTGATGTATCCCCCGGAGCAAGTCATTTATTTC | + |
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Preference number: 5 (lower is better) Translates to: AVFFHLCSLITCSKL*SLDLMYPPEQVIYF Trigger: GAAATAAATGACTTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAGGTGGAAGAAGACGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS TCA 90 bp | CATCTTTGGTTTCTTTTCTCACGGGACGCAAAGGCATGGGAAGAGTaGCAGCAGCTGTCAAAGCACTCCTGGCATAAGTGGTACTCCACA | + |
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Preference number: 5 (lower is better) Translates to: HLWFLFSRDAKAWEE*QQLSKHSWHKWYST Trigger: TGTGGAGTACCACTTATGCCAGGAGTGCTTTGACAGCTGCTGTCACTCTTCCCATGCCTTTGCGTCCCGTGAGAAAAGAAACCAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS TCA 90 bp | ACCTGTGCAGTCTCATCACTTGCTCTAAGCTGTGGAGCTTGGACCTaGTGTATCCCCCGGAGCAAGTCATTTATTTCTCCTTCGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TCAVSSLALSCGAWT*CIPRSKSFISPSVR Trigger: TCTTACCGAAGGAGAAATAAATGACTTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS TCA 90 bp | AAGTTTTGGCTCTTGCTGCTTCGACAGACAGGCGATATCTTTGCTTaGAGCCAACTGATGTGCTTGTCCATCCGTGGCTATGCCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: KFWLLLLRQTGDIFA*SQLMCLSIRGYAFP Trigger: TGGAAAGGCATAGCCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAAGCAGCAAGAGCCAAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CCA 90 bp | GTGGTACTCCACACACTCAGTACACTTGTAGCACCTCCCCTCGATTaGCAGTTGGTTACAGTTATTACAGGGAATTCCGAGGTGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: VVLHTLSTLVAPPLD*QLVTVITGNSEVFV Trigger: GACAAACACCTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAGTGTGTGGAGTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS TCA 90 bp | CTTGTCCATCCGTGGCTATGCCTTTCCAGATCAGAGGGTTATATATaGCTTGTCTGTCAATCGGGCATGAATTGCACTTGTGGAGTAACC | + |
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Preference number: 5 (lower is better) Translates to: LVHPWLCLSRSEGYI*LVCQSGMNCTCGVT Trigger: GGTTACTCCACAAGTGCAATTCATGCCCGATTGACAGACAAGTCATATATAACCCTCTGATCTGGAAAGGCATAGCCACGGATGGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CCA 90 bp | ACAAATAATGTTCTTATGAGGAAGGGAAGGAAGAAATGTTTGAGATaGTGTTTGCCCAGTGGTTGGATTTTTCAGATATGTGGGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: TNNVLMRKGRKKCLR*CLPSGWIFQICGEL Trigger: CAGTTCCCCACATATCTGAAAAATCCAACCACTGGGCAAACACCATCTCAAACATTTCTTCCTTCCCTTCCTCATAAGAACATTATTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CCA 90 bp | GCTTGTCTTTTGACTCTGACCAATATGATCTTTTTCATAGATATGTaGGCTTTCCCTTCCAGTGAGACAAATAATGTTCTTATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ACLLTLTNMIFFIDM*AFPSSETNNVLMRK Trigger: CTTCCTCATAAGAACATTATTTGTCTCACTGGAAGGGAAAGCCCACATATCTATGAAAAAGATCATATTGGTCAGAGTCAAAAGACAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CCA 72 bp | CCTTTTCTGGCTCCTCCTCCTTCAGTAGGAAGCCTGTaGGGCCGATCTGTCGCAGGAGATAGATGCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: PFLAPPPSVGSL*GRSVAGDRCCY Trigger: GTAGCAGCATCTATCTCCTGCGACAGATCGGCCCCACAGGCTTCCTACTGAAGGAGGAGGAGCCAGAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 72 bp | AAGCAAAGTCGACACTGGTACCCTGGGGCCAGCAGCTaGCTCTTCTTTGTAATCATCAGGAGAGGCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: KQSRHWYPGASS*LFFVIIRRGRD Trigger: GTCTCTGCCTCTCCTGATGATTACAAAGAAGAGCAAGCTGCTGGCCCCAGGGTACCAGTGTCGACTTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS GCA 72 bp | GTCCTTCTGCTTAAGGTAGCCGTCTTCTTCCACCTGTaGAGTCTCATCACTTGCTCTAAGCTGTGGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VLLLKVAVFFHL*SLITCSKLWSL Trigger: CAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAGGTGGAAGAAGACGGCTACCTTAAGCAGAAGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS GCA 72 bp | TTGGCTCTTGCTGCTTCGACAGACAGGCGATATCTTTaGTTGAAGCCAACTGATGTGCTTGTCCATCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LALAASTDRRYL*LKPTDVLVHPW Trigger: CCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAAGCAGCAAGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 72 bp | GCTCTTGCTGCTTCGACAGACAGGCGATATCTTTGCTaGAAGCCAACTGATGTGCTTGTCCATCCGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: ALAASTDRRYLC*KPTDVLVHPWL Trigger: TAGCCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAAGCAGCAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 90 bp | CTCCACACACTCAGTACACTTGTAGCACCTCCCCTCGATTGGCAGTaGGTTACAGTTATTACAGGGAATTCCGAGGTGTTTGTCCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LHTLSTLVAPPLDWQ*VTVITGNSEVFVQS Trigger: CGACTGGACAAACACCTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAGTGTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS TCA 72 bp | TTCGACAGACAGGCGATATCTTTGCTTGAAGCCAACTaGTGTGCTTGTCCATCCGTGGCTATGCCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FDRQAISLLEAN*CACPSVAMPFQ Trigger: CTGGAAAGGCATAGCCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS TCA 72 bp | CTCTTGCTGCTTCGACAGACAGGCGATATCTTTGCTTaGAGCCAACTGATGTGCTTGTCCATCCGTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LLLLRQTGDIFA*SQLMCLSIRGY Trigger: ATAGCCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAAGCAGCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 72 bp | CTGTGCAGTCTCATCACTTGCTCTAAGCTGTGGAGCTaGGACCTGATGTATCCCCCGGAGCAAGTCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: LCSLITCSKLWS*DLMYPPEQVIY Trigger: ATAAATGACTTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 90 bp | TTCTTCCACCTGTGCAGTCTCATCACTTGCTCTAAGCTGTGGAGCTaGGACCTGATGTATCCCCCGGAGCAAGTCATTTATTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FFHLCSLITCSKLWS*DLMYPPEQVIYFSF Trigger: GAAGGAGAAATAAATGACTTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGACTGCACAGGTGGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 90 bp | AAAGTTTTGGCTCTTGCTGCTTCGACAGACAGGCGATATCTTTGCTaGAAGCCAACTGATGTGCTTGTCCATCCGTGGCTATGCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: KVLALAASTDRRYLC*KPTDVLVHPWLCLS Trigger: GGAAAGGCATAGCCACGGATGGACAAGCACATCAGTTGGCTTCAAGCAAAGATATCGCCTGTCTGTCGAAGCAGCAAGAGCCAAAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS TCA 72 bp | GTCTCATCACTTGCTCTAAGCTGTGGAGCTTGGACCTaGTGTATCCCCCGGAGCAAGTCATTTATTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSSLALSCGAWT*CIPRSKSFISP Trigger: AGGAGAAATAAATGACTTGCTCCGGGGGATACATCAGGTCCAAGCTCCACAGCTTAGAGCAAGTGATGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CCA 72 bp | CACACACTCAGTACACTTGTAGCACCTCCCCTCGATTaGCAGTTGGTTACAGTTATTACAGGGAATTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: HTLSTLVAPPLD*QLVTVITGNSE Trigger: CTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 72 bp | CCACACACTCAGTACACTTGTAGCACCTCCCCTCGATaGGCAGTTGGTTACAGTTATTACAGGGAATTCCGA | + |
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Preference number: 6 (lower is better) Translates to: PHTQYTCSTSPR*AVGYSYYREFR Trigger: TCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAGTGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 90 bp | AGTGGTACTCCACACACTCAGTACACTTGTAGCACCTCCCCTCGATaGGCAGTTGGTTACAGTTATTACAGGGAATTCCGAGGTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SGTPHTQYTCSTSPR*AVGYSYYREFRGVC Trigger: ACAAACACCTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAGTGTGTGGAGTACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS GCA 72 bp | CAGCAGCACTTCTTGACAAATAGGACAGATATCCCCTaGATTGATGTCCTTCTGCTTAAGGTAGCCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QQHFLTNRTDIP*IDVLLLKVAVF Trigger: GAAGACGGCTACCTTAAGCAGAAGGACATCAATGCAGGGGATATCTGTCCTATTTGTCAAGAAGTGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 72 bp | CTCAGTACACTTGTAGCACCTCCCCTCGATTGGCAGTaGGTTACAGTTATTACAGGGAATTCCGAGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LSTLVAPPLDWQ*VTVITGNSEVF Trigger: AAACACCTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGAGGGGAGGTGCTACAAGTGTACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CCA 72 bp | GGGAAGGAAGAAATGTTTGAGATGGTGTTTGCCCAGTaGTTGGATTTTTCAGATATGTGGGGAACTGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GKEEMFEMVFAQ*LDFSDMWGTVC Trigger: GCAAACAGTTCCCCACATATCTGAAAAATCCAACCACTGGGCAAACACCATCTCAAACATTTCTTCCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 90 bp | TCGATTGGCAGTTGGTTACAGTTATTACAGGGAATTCCGAGGTGTTaGTCCAGTCGTTCTTTCTCAGATATAGTTATGAGTTTGTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SIGSWLQLLQGIPRC*SSRSFSDIVMSLLE Trigger: CTCTAACAAACTCATAACTATATCTGAGAAAGAACGACTGGACAAACACCTCGGAATTCCCTGTAATAACTGTAACCAACTGCCAATCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CCA 72 bp | GTTCTTATGAGGAAGGGAAGGAAGAAATGTTTGAGATaGTGTTTGCCCAGTGGTTGGATTTTTCAGATATGT | + |
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Preference number: 6 (lower is better) Translates to: VLMRKGRKKCLR*CLPSGWIFQIC Trigger: ACATATCTGAAAAATCCAACCACTGGGCAAACACCATCTCAAACATTTCTTCCTTCCCTTCCTCATAAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 90 bp | CCGAGGTGTTTGTCCAGTCGTTCTTTCTCAGATATAGTTATGAGTTaGTTAGAGTTTTTGAACTCCTCCAAGATAACTTTTAGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PRCLSSRSFSDIVMS*LEFLNSSKITFSGA Trigger: TGCACCACTAAAAGTTATCTTGGAGGAGTTCAAAAACTCTAACAAACTCATAACTATATCTGAGAAAGAACGACTGGACAAACACCTCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 90 bp | GGGTGGATGACCAAGTTTTTGTCTAACTTTCCCCATGGAATTATTTaGCCTCTTAGACAAACTAAGTTTGGTTGTACCCAAGTTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: GWMTKFLSNFPHGII*PLRQTKFGCTQVDS Trigger: ACTATCAACTTGGGTACAACCAAACTTAGTTTGTCTAAGAGGCAAAATAATTCCATGGGGAAAGTTAGACAAAAACTTGGTCATCCACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 72 bp | AGTTGGTTACAGTTATTACAGGGAATTCCGAGGTGTTaGTCCAGTCGTTCTTTCTCAGATATAGTTATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SWLQLLQGIPRC*SSRSFSDIVMS Trigger: ACTCATAACTATATCTGAGAAAGAACGACTGGACAAACACCTCGGAATTCCCTGTAATAACTGTAACCAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 72 bp | GGGTTATATATGACTTGTCTGTCAATCGGGCATGAATaGCACTTGTGGAGTAACCAATTGTCAATACATTTC | + |
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Preference number: 6 (lower is better) Translates to: GLYMTCLSIGHE*HLWSNQLSIHF Trigger: GAAATGTATTGACAATTGGTTACTCCACAAGTGCAATTCATGCCCGATTGACAGACAAGTCATATATAACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 90 bp | TCCAGTCGTTCTTTCTCAGATATAGTTATGAGTTTGTTAGAGTTTTaGAACTCCTCCAAGATAACTTTTAGTGGTGCAAACTCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRSFSDIVMSLLEF*NSSKITFSGANSSL Trigger: CAGAGAAGAGTTTGCACCACTAAAAGTTATCTTGGAGGAGTTCAAAAACTCTAACAAACTCATAACTATATCTGAGAAAGAACGACTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038223.8 ENSMUST00000152829.2 |
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| CDS CAA 90 bp | TGTCAATACATTTCCTGTGAAACTTGTGAGTACATGGTAGCAGTCTaGTATATTGACCAAAAGAAAATGATTTCAAGCAAAGTCGACACT | + |
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Preference number: 6 (lower is better) Translates to: CQYISCETCEYMVAV*YIDQKKMISSKVDT Trigger: AGTGTCGACTTTGCTTGAAATCATTTTCTTTTGGTCAATATACAAGACTGCTACCATGTACTCACAAGTTTCACAGGAAATGTATTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CCA 72 bp | TTGACTCTGACCAATATGATCTTTTTCATAGATATGTaGGCTTTCCCTTCCAGTGAGACAAATAATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LTLTNMIFFIDM*AFPSSETNNVL Trigger: AAGAACATTATTTGTCTCACTGGAAGGGAAAGCCCACATATCTATGAAAAAGATCATATTGGTCAGAGTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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| CDS CAA 72 bp | ACCAAGTTTTTGTCTAACTTTCCCCATGGAATTATTTaGCCTCTTAGACAAACTAAGTTTGGTTGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: TKFLSNFPHGII*PLRQTKFGCTQ Trigger: TTGGGTACAACCAAACTTAGTTTGTCTAAGAGGCAAAATAATTCCATGGGGAAAGTTAGACAAAAACTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038223.8 |
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