Pregenerated sensors for ZSCAN5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058028Ensembl transcript IDs: ENSMUST00000072662.12, ENSMUST00000155314.2, ENSMUST00000165445.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGCACGGCACCCTTTACTCCAAGAGAACCAGCGGGACCCAGGGCTaGAAGAGGGTCCTGACCAACAAACACAGATGCCTCTGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LHGTLYSKRTSGTQG*KRVLTNKHRCLCLF Trigger: GAAGAGGCAGAGGCATCTGTGTTTGTTGGTCAGGACCCTCTTCCAGCCCTGGGTCCCGCTGGTTCTCTTGGAGTAAAGGGTGCCGTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 90 bp | TCCTCTCAGGAATCACTCCCAGCAAAATGCCCTCTTCCTGGCTGGTaGATGGCTCTTCGGTCTCAGAGAGGTTCTGTAGCTCCCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSQESLPAKCPLPGW*MALRSQRGSVAPGW Trigger: CCAGCCGGGAGCTACAGAACCTCTCTGAGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTCCTGAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 90 bp | GTCTCCTCTCAGGAATCACTCCCAGCAAAATGCCCTCTTCCTGGCTaGTGGATGGCTCTTCGGTCTCAGAGAGGTTCTGTAGCTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: VSSQESLPAKCPLPG*WMALRSQRGSVAPG Trigger: GCCGGGAGCTACAGAACCTCTCTGAGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTCCTGAGAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 90 bp | TTACACACAAAAGGCTTCTCCTTCGTGTGGACTCGACTGTGGCCCTaGAGGGTGGACCCATGGGCAAACTCCATCCCACAGACTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: LHTKGFSFVWTRLWP*RVDPWANSIPQTSH Trigger: GTGTGAAGTCTGTGGGATGGAGTTTGCCCATGGGTCCACCCTGCAGGGCCACAGTCGAGTCCACACGAAGGAGAAGCCTTTTGTGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 90 bp | TACAGACATAGGGTCTCAAGTTGCAATGGATGCGGAAATGGACATTaGGGTTGCCCTTGTGGCAGAAGCGTTGCCCACAATCCTTACACA | + |
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Preference number: 5 (lower is better) Translates to: YRHRVSSCNGCGNGH*GCPCGRSVAHNPYT Trigger: TGTGTAAGGATTGTGGGCAACGCTTCTGCCACAAGGGCAACCTCAATGTCCATTTCCGCATCCATTGCAACTTGAGACCCTATGTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 90 bp | TCTGAAGATCTCTGTTCAAGGCTAGATCTCTTTCCAGAATATGGGTaGACGATGGTACAGCATCCACAACAGTGTCTTCTTGGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SEDLCSRLDLFPEYG*TMVQHPQQCLLGAA Trigger: TGCAGCCCCAAGAAGACACTGTTGTGGATGCTGTACCATCGTTCACCCATATTCTGGAAAGAGATCTAGCCTTGAACAGAGATCTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 90 bp | CTGTATTGCCCATATAGGACGCCACTCCTTGGGAAGTGGGTAAGTTaGAACCAGAAAGACTCTGAAGATCTCTGTTCAAGGCTAGATCTC | + |
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Preference number: 5 (lower is better) Translates to: LYCPYRTPLLGKWVS*NQKDSEDLCSRLDL Trigger: GAGATCTAGCCTTGAACAGAGATCTTCAGAGTCTTTCTGGTTTCAACTTACCCACTTCCCAAGGAGTGGCGTCCTATATGGGCAATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 72 bp | AAAGGCTTCTCCTTCGTGTGGACTCGACTGTGGCCCTaGAGGGTGGACCCATGGGCAAACTCCATCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: KGFSFVWTRLWP*RVDPWANSIPQ Trigger: CTGTGGGATGGAGTTTGCCCATGGGTCCACCCTGCAGGGCCACAGTCGAGTCCACACGAAGGAGAAGCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | TCTCCTTCGTGTGGACTCGACTGTGGCCCTGCAGGGTaGACCCATGGGCAAACTCCATCCCACAGACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPSCGLDCGPAG*THGQTPSHRLH Trigger: GTGAAGTCTGTGGGATGGAGTTTGCCCATGGGTCCACCCTGCAGGGCCACAGTCGAGTCCACACGAAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 72 bp | AGAGAACCAGCGGGACCCAGGGCTGGAAGAGGGTCCTaGCCAACAAACACAGATGCCTCTGCCTCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: REPAGPRAGRGS*PTNTDASASSK Trigger: CTTGGAAGAGGCAGAGGCATCTGTGTTTGTTGGTCAGGACCCTCTTCCAGCCCTGGGTCCCGCTGGTTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 72 bp | CTCCTGGGAGAAGTCCGTATGTCCCCATTTATCCTCTaGGGCTTCAGCCTTCCCAACGCTGGGATGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLGEVRMSPFIL*GFSLPNAGMPK Trigger: CTTCGGCATCCCAGCGTTGGGAAGGCTGAAGCCGCAGAGGATAAATGGGGACATACGGACTTCTCCCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | CACACAAAAGGCTTCTCCTTCGTGTGGACTCGACTGTaGCCCTGCAGGGTGGACCCATGGGCAAACTCCATC | + |
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Preference number: 6 (lower is better) Translates to: HTKGFSFVWTRL*PCRVDPWANSI Trigger: GATGGAGTTTGCCCATGGGTCCACCCTGCAGGGCCACAGTCGAGTCCACACGAAGGAGAAGCCTTTTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 72 bp | CTGGCTGTCTCCTCTCAGGAATCACTCCCAGCAAAATaGCCTCTTCCTGGCTGGTGGATGGCTCTTCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LAVSSQESLPAK*PLPGWWMALRS Trigger: AGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTCCTGAGAGGAGACAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | ACCCTTTACTCCAAGAGAACCAGCGGGACCCAGGGCTaGAAGAGGGTCCTGACCAACAAACACAGATGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TLYSKRTSGTQG*KRVLTNKHRCL Trigger: GAGGCATCTGTGTTTGTTGGTCAGGACCCTCTTCCAGCCCTGGGTCCCGCTGGTTCTCTTGGAGTAAAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | CTCTCAGGAATCACTCCCAGCAAAATGCCCTCTTCCTaGCTGGTGGATGGCTCTTCGGTCTCAGAGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSGITPSKMPSS*LVDGSSVSERF Trigger: GAACCTCTCTGAGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTCCTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CAA 72 bp | TGGCGTTTCCTGTCCCTCAGCAGCTTTTCCAGGTCTTaGCAGCTCTTCACTCCGCTCTCCTTCACTAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: WRFLSLSSFSRS*QLFTPLSFTKA Trigger: GGCCTTAGTGAAGGAGAGCGGAGTGAAGAGCTGCAAAGACCTGGAAAAGCTGCTGAGGGACAGGAAACGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072662.12 ENSMUST00000155314.2 ENSMUST00000165445.3 |
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| CDS CAA 72 bp | ACACTGAAACCGAGCCTGGCCAGCAAGACTGTCAACTaGCTTCTCAGGCTGTGGGTTAGCAGGCTCGGGATT | + |
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Preference number: 6 (lower is better) Translates to: TLKPSLASKTVN*LLRLWVSRLGI Trigger: AATCCCGAGCCTGCTAACCCACAGCCTGAGAAGCAAGTTGACAGTCTTGCTGGCCAGGCTCGGTTTCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CAA 90 bp | CAGAATATGGGTGAACGATGGTACAGCATCCACAACAGTGTCTTCTaGGGGCTGCACGGCACCCTTTACTCCAAGAGAACCAGCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QNMGERWYSIHNSVF*GLHGTLYSKRTSGT Trigger: GGTCCCGCTGGTTCTCTTGGAGTAAAGGGTGCCGTGCAGCCCCAAGAAGACACTGTTGTGGATGCTGTACCATCGTTCACCCATATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 72 bp | TTGCAGCTCTTCACTCCGCTCTCCTTCACTAAGGCCTaGTGCTCTGGTGGCATGCAAATTAGGAACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LQLFTPLSFTKA*CSGGMQIRNCS Trigger: GGAGCAGTTCCTAATTTGCATGCCACCAGAGCAGCAGGCCTTAGTGAAGGAGAGCGGAGTGAAGAGCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072662.12 ENSMUST00000155314.2 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | GAATCACTCCCAGCAAAATGCCCTCTTCCTGGCTGGTaGATGGCTCTTCGGTCTCAGAGAGGTTCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: ESLPAKCPLPGW*MALRSQRGSVA Trigger: AGCTACAGAACCTCTCTGAGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | CAGGAATCACTCCCAGCAAAATGCCCTCTTCCTGGCTaGTGGATGGCTCTTCGGTCTCAGAGAGGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QESLPAKCPLPG*WMALRSQRGSV Trigger: TACAGAACCTCTCTGAGACCGAAGAGCCATCCACCAGCCAGGAAGAGGGCATTTTGCTGGGAGTGATTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CAA 72 bp | GGTGAACGATGGTACAGCATCCACAACAGTGTCTTCTaGGGGCTGCACGGCACCCTTTACTCCAAGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: GERWYSIHNSVF*GLHGTLYSKRT Trigger: GGTTCTCTTGGAGTAAAGGGTGCCGTGCAGCCCCAAGAAGACACTGTTGTGGATGCTGTACCATCGTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 72 bp | AAACACAGATGCCTCTGCCTCTTCCAAGTCAGGAACTaGGTCACTCCCTGGGCTCATCTCAGGTCTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: KHRCLCLFQVRN*VTPWAHLRSQV Trigger: TACCTGAGACCTGAGATGAGCCCAGGGAGTGACTCAGTTCCTGACTTGGAAGAGGCAGAGGCATCTGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 72 bp | AGGGTCTCAAGTTGCAATGGATGCGGAAATGGACATTaGGGTTGCCCTTGTGGCAGAAGCGTTGCCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: RVSSCNGCGNGH*GCPCGRSVAHN Trigger: ATTGTGGGCAACGCTTCTGCCACAAGGGCAACCTCAATGTCCATTTCCGCATCCATTGCAACTTGAGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CAA 72 bp | CTCAAGTTGCAATGGATGCGGAAATGGACATTGAGGTaGCCCTTGTGGCAGAAGCGTTGCCCACAATCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LKLQWMRKWTLR*PLWQKRCPQSL Trigger: TAAGGATTGTGGGCAACGCTTCTGCCACAAGGGCAACCTCAATGTCCATTTCCGCATCCATTGCAACTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS GCA 72 bp | CTCAGGTGGGTTTTCATGTGTCGCTTCCAAGTCCCCTaGTGTCGGAAAGTCTTGTTACACTTCTTACAGACA | + |
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Preference number: 6 (lower is better) Translates to: LRWVFMCRFQVP*CRKVLLHFLQT Trigger: TGTCTGTAAGAAGTGTAACAAGACTTTCCGACAGCAGGGGACTTGGAAGCGACACATGAAAACCCACCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS TCA 72 bp | CCATATAGGACGCCACTCCTTGGGAAGTGGGTAAGTTaGAACCAGAAAGACTCTGAAGATCTCTGTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PYRTPLLGKWVS*NQKDSEDLCSR Trigger: CCTTGAACAGAGATCTTCAGAGTCTTTCTGGTTTCAACTTACCCACTTCCCAAGGAGTGGCGTCCTATATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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| CDS CCA 72 bp | AGATCTCTGTTCAAGGCTAGATCTCTTTCCAGAATATaGGTGAACGATGGTACAGCATCCACAACAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSLFKARSLSRI*VNDGTASTTVS Trigger: AGACACTGTTGTGGATGCTGTACCATCGTTCACCCATATTCTGGAAAGAGATCTAGCCTTGAACAGAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072662.12 ENSMUST00000165445.3 |
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