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Pregenerated sensors for ZSCAN4F (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070828

Ensembl transcript IDs: ENSMUST00000141491.2, ENSMUST00000145237.8

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CAATCCACAAGCATGTTATATCATTATTGGGACAGTACAATTTACTaGCAACATTCTTCTCTCTTTGAAGATGACATACTGAGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: QSTSMLYHYWDSTIY*QHSSLFEDDILRLK
Trigger: CTTCAGCCTCAGTATGTCATCTTCAAAGAGAGAAGAATGTTGCAAGTAAATTGTACTGTCCCAATAATGATATAACATGCTTGTGGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS TCA 90 bp CTTTCCACTTCTCAGTCAAAGCATACTTGTCCTTGCAGTGCCCAGTaGGGAGAAACTGCTCCAAGACCAGTTGAGAAATCATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LSTSQSKHTCPCSAQ*GETAPRPVEKSSAP
Trigger: AGGAGCAGATGATTTCTCAACTGGTCTTGGAGCAGTTTCTCCTCACTGGGCACTGCAAGGACAAGTATGCTTTGACTGAGAAGTGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CCA 90 bp CTCCAAGACCAGTTGAGAAATCATCTGCTCCTTAGTCTGCTTTTCTaGCTGCAACCAGGAGTTGAACATCTTCCAGAGACTTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LQDQLRNHLLLSLLF*LQPGVEHLPETLQL
Trigger: GAGCTGCAAAGTCTCTGGAAGATGTTCAACTCCTGGTTGCAGCCAGAAAAGCAGACTAAGGAGCAGATGATTTCTCAACTGGTCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CCA 90 bp GGCATGTTTTCAGAAAAGAGGGCTTCTTGTCCTTGCATTGAAACATaGACCATGACAGGAGGCTTCAAGCACTCATCAGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: GMFSEKRASCPCIET*TMTGGFKHSSVRLS
Trigger: GGAGAGTCTGACTGATGAGTGCTTGAAGCCTCCTGTCATGGTCCATGTTTCAATGCAAGGACAAGAAGCCCTCTTTTCTGAAAACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 90 bp TTACCAAGAAGGACAGGATCAGAGATAAGCTGCTCTTGCCTAGACTaGAACCCTGGTACCTCCCTAGGGTCTTTTTCAGAAAAACATTCC +
Preference number: 5 (lower is better)
Translates to: LPRRTGSEISCSCLD*NPGTSLGSFSEKHS
Trigger: GGAATGTTTTTCTGAAAAAGACCCTAGGGAGGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGATCCTGTCCTTCTTGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CCA 90 bp TCTATCTTGTGTGGTGTCTACTGGCATCTGCTCATTATCTGGTGTTaGCCTTGTTGCAGATTGCTGTTGTTTCAAAAGCTTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: SILCGVYWHLLIIWC*PCCRLLLFQKLDDF
Trigger: GAAGTCATCAAGCTTTTGAAACAACAGCAATCTGCAACAAGGCCAACACCAGATAATGAGCAGATGCCAGTAGACACCACACAAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CCA 90 bp CATTTTCACTGTTTTCTTGTCCTGTGGCCAATAATCTATCTTGTGTaGTGTCTACTGGCATCTGCTCATTATCTGGTGTTGGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: HFHCFLVLWPIIYLV*CLLASAHYLVLALL
Trigger: CAACAAGGCCAACACCAGATAATGAGCAGATGCCAGTAGACACCACACAAGATAGATTATTGGCCACAGGACAAGAAAACAGTGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp TCGGAGCACTCGGGAAGTCTACATGATGACTGGGGGTaGCTTGACTTGCTCTTCTGGCACCATGAGGGAATT +
Preference number: 6 (lower is better)
Translates to: SEHSGSLHDDWG*LDLLFWHHEGI
Trigger: AATTCCCTCATGGTGCCAGAAGAGCAAGTCAAGGCACCCCCAGTCATCATGTAGACTTCCCGAGTGCTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CAA 72 bp CTTACCAAGAAGGACAGGATCAGAGATAAGCTGCTCTaGCCTAGACTGCAACCCTGGTACCTCCCTAGGGTC +
Preference number: 6 (lower is better)
Translates to: LTKKDRIRDKLL*PRLQPWYLPRV
Trigger: GACCCTAGGGAGGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGATCCTGTCCTTCTTGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp TTACCAAGAAGGACAGGATCAGAGATAAGCTGCTCTTaGCTAGACTGCAACCCTGGTACCTCCCTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LPRRTGSEISCS*LDCNPGTSLGS
Trigger: AGACCCTAGGGAGGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGATCCTGTCCTTCTTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CAA 72 bp CTGGCTTTCCACTTCTCAGTCAAAGCATACTTGTCCTaGCAGTGCCCAGTGAGGAGAAACTGCTCCAAGACC +
Preference number: 6 (lower is better)
Translates to: LAFHFSVKAYLS*QCPVRRNCSKT
Trigger: GGTCTTGGAGCAGTTTCTCCTCACTGGGCACTGCAAGGACAAGTATGCTTTGACTGAGAAGTGGAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CAA 72 bp CTACCACTGGCTTTCCACTTCTCAGTCAAAGCATACTaGTCCTTGCAGTGCCCAGTGAGGAGAAACTGCTCC +
Preference number: 6 (lower is better)
Translates to: LPLAFHFSVKAY*SLQCPVRRNCS
Trigger: GGAGCAGTTTCTCCTCACTGGGCACTGCAAGGACAAGTATGCTTTGACTGAGAAGTGGAAAGCCAGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CAA 90 bp CTGCTTTTCTGGCTGCAACCAGGAGTTGAACATCTTCCAGAGACTTaGCAGCTCCTGAGTTGCCCAGCAGCCATTGTTACTTGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: LLFWLQPGVEHLPET*QLLSCPAAIVTWGK
Trigger: TTTTCCCCAAGTAACAATGGCTGCTGGGCAACTCAGGAGCTGCAAAGTCTCTGGAAGATGTTCAACTCCTGGTTGCAGCCAGAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141491.2
ENSMUST00000145237.8
CDS CAA 90 bp CTCATATCGCTACCACTGGCTTTCCACTTCTCAGTCAAAGCATACTaGTCCTTGCAGTGCCCAGTGAGGAGAAACTGCTCCAAGACCAGT +
Preference number: 6 (lower is better)
Translates to: LISLPLAFHFSVKAY*SLQCPVRRNCSKTS
Trigger: ACTGGTCTTGGAGCAGTTTCTCCTCACTGGGCACTGCAAGGACAAGTATGCTTTGACTGAGAAGTGGAAAGCCAGTGGTAGCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp AGGACAGGATCAGAGATAAGCTGCTCTTGCCTAGACTaGAACCCTGGTACCTCCCTAGGGTCTTTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: RTGSEISCSCLD*NPGTSLGSFSE
Trigger: TTCTGAAAAAGACCCTAGGGAGGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGATCCTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS TCA 72 bp TCTCAGTCAAAGCATACTTGTCCTTGCAGTGCCCAGTaGGGAGAAACTGCTCCAAGACCAGTTGAGAAATCA +
Preference number: 6 (lower is better)
Translates to: SQSKHTCPCSAQ*GETAPRPVEKS
Trigger: TGATTTCTCAACTGGTCTTGGAGCAGTTTCTCCTCACTGGGCACTGCAAGGACAAGTATGCTTTGACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS CCA 72 bp ATCAGAGATAAGCTGCTCTTGCCTAGACTGCAACCCTaGTACCTCCCTAGGGTCTTTTTCAGAAAAACATTC +
Preference number: 6 (lower is better)
Translates to: IRDKLLLPRLQP*YLPRVFFRKTF
Trigger: GAATGTTTTTCTGAAAAAGACCCTAGGGAGGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp AATGGCATGTTTTCAGAAAAGAGGGCTTCTTGTCCTTaGATTGAAACATGGACCATGACAGGAGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: NGMFSEKRASCP*IETWTMTGGFK
Trigger: CTTGAAGCCTCCTGTCATGGTCCATGTTTCAATGCAAGGACAAGAAGCCCTCTTTTCTGAAAACATGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp ATCTGCTCATTATCTGGTGTTGGCCTTGTTGCAGATTaGTGTTGTTTCAAAAGCTTGATGACTTCTTTTAAT +
Preference number: 6 (lower is better)
Translates to: ICSLSGVGLVAD*CCFKSLMTSFN
Trigger: ATTAAAAGAAGTCATCAAGCTTTTGAAACAACAGCAATCTGCAACAAGGCCAACACCAGATAATGAGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8
CDS GCA 72 bp GTCCATTTCATTTCCACTACAGCTTTCACCAACATTTaGTTCAGTAGCATTACAAGAGTTGTTGCATTCATT +
Preference number: 6 (lower is better)
Translates to: VHFISTTAFTNI*FSSITRVVAFI
Trigger: AATGAATGCAACAACTCTTGTAATGCTACTGAAGCAAATGTTGGTGAAAGCTGTAGTGGAAATGAAATGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145237.8