Pregenerated sensors for ZSCAN29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050619Ensembl transcript IDs: ENSMUST00000079024.12, ENSMUST00000110661.9, ENSMUST00000146243.2, ENSMUST00000163766.8
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTATAGCCTCCTCTCCATCTTCATGCTGCCAGTCCCTCTGCCCTaGCTTCTCCGTCTCAGCATCACTGCCTGCCTGGGCAGAATGGGA | + |
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Preference number: 1 (lower is better) Translates to: SYSLLSIFMLPVPLP*LLRLSITACLGRMG Trigger: TCCCATTCTGCCCAGGCAGGCAGTGATGCTGAGACGGAGAAGCCAGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGAGGCTATAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CCA 90 bp | CTTGGGCTTCGGAACAGGACAGGTGCAGGTGGGTTGTCAGGGTCCTaGGGGGTTGCCTCCGGGTCATCACTGTCTGACCTTTCAGCTATA | + |
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Preference number: 1 (lower is better) Translates to: LGLRNRTGAGGLSGS*GVASGSSLSDLSAI Trigger: TATAGCTGAAAGGTCAGACAGTGATGACCCGGAGGCAACCCCCCAGGACCCTGACAACCCACCTGCACCTGTCCTGTTCCGAAGCCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CCA 90 bp | CTCCTCAAACCTAATCCCAAAGCCCAAGACAAGCTTCTTACCACTTaGGCTTCGGAACAGGACAGGTGCAGGTGGGTTGTCAGGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LLKPNPKAQDKLLTT*ASEQDRCRWVVRVL Trigger: CAGGACCCTGACAACCCACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGATTAGGTTTGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR GCA 90 bp | TGGCATTGCAGTTCACTTCCAAAGCCGTCTCGGATCCTGAGGCCCTaGGTTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WHCSSLPKPSRILRP*VRQGFLVPSCLLRQ Trigger: CTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAACGCAGGGCCTCAGGATCCGAGACGGCTTTGGAAGTGAACTGCAATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR GCA 90 bp | TTCTGTCTGAGGTTTGAACCCAAGGCCTTGTGCATACTAGGCAAGTaGTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: FCLRFEPKALCILGK*STTELDRSPAPDSW Trigger: CCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCCTAGTATGCACAAGGCCTTGGGTTCAAACCTCAGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR TCA 90 bp | AGTACAACTCAGGGTCTCCCTGTAGCTTTCCCTGTCTCTGCTAATTaGTTCTCTGCAGACTCTACGGCTCTATCATGCATTCTTAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: STTQGLPVAFPVSAN*FSADSTALSCILKV Trigger: AACCTTAAGAATGCATGATAGAGCCGTAGAGTCTGCAGAGAATCAATTAGCAGAGACAGGGAAAGCTACAGGGAGACCCTGAGTTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR GCA 90 bp | CCAGTTGCCAGTTTTCATGGTGATGTACACCTGTACTTCTATACTTaGAATTTGAAGACTGAGGCAGTCGGATCTCTGAGATCAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PVASFHGDVHLYFYT*NLKTEAVGSLRSRA Trigger: TGCCCTTGATCTCAGAGATCCGACTGCCTCAGTCTTCAAATTGCAAGTATAGAAGTACAGGTGTACATCACCATGAAAACTGGCAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR TCA 90 bp | ATCTTTAACTGCTTTTTCTATCGCCACATCTCTAGTTTGCTCTTTTaGCTGCTAGTCCACAAGGGACAGGTGCAATTTAGATGGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: IFNCFFYRHISSLLF*LLVHKGQVQFRWRG Trigger: TCCTCTCCATCTAAATTGCACCTGTCCCTTGTGGACTAGCAGTCAAAAGAGCAAACTAGAGATGTGGCGATAGAAAAAGCAGTTAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CCA 90 bp | GCTTTTGCCATACTTGACATATTTATAAGGTCTGTCTTCCAAGCCTaGCCTCTGATAGGTCAGGACTTTACCTATATTCTTCTCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: AFAILDIFIRSVFQA*PLIGQDFTYILLWE Trigger: TTCCCAGAGAAGAATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATGTCAAGTATGGCAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
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| 3UTR CCA 90 bp | TTTTACCTATACTTGAGGAAATGGCAATTAGTACTGAGCACCCATTaGCTGCATGACTCTATACTAGGTGTGTGGAGTGTAGGAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: FYLYLRKWQLVLSTH*LHDSILGVWSVGET Trigger: TGTTTCTCCTACACTCCACACACCTAGTATAGAGTCATGCAGCCAATGGGTGCTCAGTACTAATTGCCATTTCCTCAAGTATAGGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CCA 90 bp | AAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTaGGAAAAGATAGAACCACGATGGACTTTAAACTCTTTAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: KCSTTELDRSPAPDS*EKIEPRWTLNSLKI Trigger: TATCTTTAAAGAGTTTAAAGTCCATCGTGGTTCTATCTTTTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR TCA 90 bp | CTGCCCCACTCCAATTTACCCAGTTACTTTCCTTCCTTTGAATGCTaGCTTTCTAGACTTTTCTCAGAGCAAGTTATGTTAAAGAGTATG | + |
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Preference number: 1 (lower is better) Translates to: LPHSNLPSYFPSFEC*LSRLFSEQVMLKSM Trigger: CATACTCTTTAACATAACTTGCTCTGAGAAAAGTCTAGAAAGTCAGCATTCAAAGGAAGGAAAGTAACTGGGTAAATTGGAGTGGGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CCA 90 bp | CTATCTCAGATCTTAATAAATGTGAAAATTAGTTATTCCATGTCTTaGCCATCTGGCCATGGTCATCTTTTCTCTGACCTGCTCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: LSQILINVKISYSMS*PSGHGHLFSDLLIK Trigger: TTTGATGAGCAGGTCAGAGAAAAGATGACCATGGCCAGATGGCCAAGACATGGAATAACTAATTTTCACATTTATTAAGATCTGAGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR TCA 90 bp | AGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTaGGATACCATTTTCCCTTTATTGCTAATGTTACTTCTTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: RQGFLVPSCLLRQHN*DTIFPLLLMLLLCL Trigger: TAAACAAAGAAGTAACATTAGCAATAAAGGGAAAATGGTATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGACCTTTCAGCTATAGCCTCCTCTCCATCTTCATGCTGCCAGTCCCTCTGCGCATCACTGCCTGCCTaGGCAGAATGGGAGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SDLSAIASSPSSCCQSLCASLPA*AEWEAA Trigger: GGCAGCCTCCCATTCTGCCCAGGCAGGCAGTGATGC...GCAGAGGGACTGGCAGCATGAAGATGGAGAGGAGGCTATAGCTGAAAGGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAAAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTCTCAGCATCACTGCCTaGCTGGGCAGAATGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: IPKPKTSFLPLGLRNRTGLSITA*LGRMGG Trigger: GCCTCCCATTCTGCCCAGGCAGGCAGTGATGCTGAG...ACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTACACTCATGTACTTGATCTGCAGGAGGAAGGACTGCAGAGACCAGAATCCAGTCCCTCTGCCCTaGCTTCTCCGTCTCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: GPTLMYLICRRKDCRDQNPVPLP*LLRLSI Trigger: GATGCTGAGACGGAGAAGCCAGGGCAGAGGGACTGG...ATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAAAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTCGGGTCATCACTGTCTaGCCTTTCAGCTATAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: IPKPKTSFLPLGLRNRTGRVITV*PFSYSL Trigger: GAGGCTATAGCTGAAAGGTCAGACAGTGATGACCCG...ACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTCCACATCCAGTTTCATTGCTCCTCAAACCTAATCCCAAAGCCCAAGACACCGTCTCAGCATCACTaGCTGCCTGGGCAGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: WFHIQFHCSSNLIPKPKTPSQHH*LPGQNG Trigger: CCCATTCTGCCCAGGCAGGCAGTGATGCTGAGACGG...TGTCTTGGGCTTTGGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTGTTACTATCTCCATTAAGCAACCCCAGCAAGAGCCAAGACCTGAAGGGTTCGGAACAGGACAGGTaGAGGTGGGTTGTCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HLLLSPLSNPSKSQDLKGSEQDR*RWVVRV Trigger: GACCCTGACAACCCACCTGCACCTGTCCTGTTCCGA...ACCCTTCAGGTCTTGGCTCTTGCTGGGGTTGCTTAATGGAGATAGTAACAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAAAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTGGCAATGAAATGACCTaGGCACTCATCAGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IPKPKTSFLPLGLRNRTGGNEMT*ALIRAS Trigger: GGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCC...ACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CAA 90 bp | AACCCCAGCAAGAGCCAAGACCTGAAGGGTCCTACACTCATGTACTaGATCTGCAGGAGGAAGGACTGCAGAGACCAGAATGAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: NPSKSQDLKGPTLMY*ICRRKDCRDQNEER Trigger: TCTTTCCTCATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACCCTTCAGGTCTTGGCTCTTGCTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGAACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTTTCCTCTCCATCTTCATaGTGCCAGTCCCTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LRNCPFQNHTAAKFPSWLSSPSS*CQSLCP Trigger: AGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGA...AAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGTTCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGGGAAAAAGGACTTCGCAAGTaGTACAGTTTCCAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GKCSTTELDRSPAPDSWEKGLRK*YSFQGP Trigger: AGGGCCTTGGAAACTGTAGCACTTGCGAAGTCCTTT...TTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGTCTGTCTTCCAAGCCTaGCCTCTGATAGGTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SAHLYGFSTSWETGYLRWSVFQA*PLIGQD Trigger: GTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGA...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTCTGTCTTCTGTCTGAGGTTTGAACCCAAGGCCTaGTGCATACTAGGCAAGTGCTCTACCACTGAGCTAGATAGATCC | + |
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Preference number: 2 (lower is better) Translates to: CVCVSVFCLRFEPKA*CILGKCSTTELDRS Trigger: GGATCTATCTAGCTCAGTGGTAGAGCACTTGCCTAGTATGCACAAGGCCTTGGGTTCAAACCTCAGACAGAAGACAGACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CAA 90 bp | TCTTCCTTGACATTGCAGTTCACAATAATCTCATCTTCCTTGGCATaGCAGTTCACTTCCAAAGCCGTCTCGGATCCTGAGGCCCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: SSLTLQFTIISSSLA*QFTSKAVSDPEALR Trigger: ACGCAGGGCCTCAGGATCCGAGACGGCTTTGGAAGTGAACTGCAATGCCAAGGAAGATGAGATTATTGTGAACTGCAATGTCAAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTTGCCAGTTTTCATGGTaGTGTACACCTGTACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTCQFSW*CTPVLL Trigger: TAGAAGTACAGGTGTACATCACCATGAAAACTGGCA...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTTGTGTGGATGACCACTCTTaGCCTTCCTGTAGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KELPLSESHCCQIPIMACVDDHS*PSCSSS Trigger: AGAAGAGCTACAGGAAGGTCAAGAGTGGTCATCCAC...ACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTACACTCATGTACTTGATCTGCAGGAGGAAGGACTGCAGAGACCAGAATAGTGTATCTTCAACCTaGCACATGTCCACTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GPTLMYLICRRKDCRDQNSVSST*HMSTAG Trigger: ACCTGCAGTGGACATGTGTCAGGTTGAAGATACACT...ATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CAA 90 bp | ATCTCATCTTCCTTGACATTGCAGTTCACAATAATCTCATCTTCCTaGGCATTGCAGTTCACTTCCAAAGCCGTCTCGGATCCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ISSSLTLQFTIISSS*ALQFTSKAVSDPEA Trigger: GGCCTCAGGATCCGAGACGGCTTTGGAAGTGAACTGCAATGCCAAGGAAGATGAGATTATTGTGAACTGCAATGTCAAGGAAGATGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CAA 90 bp | ACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTaGTCTTCATCTGTTACTATCTCCATTAAGCAACCCCAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TAPFRITLLPNSHHG*SSSVTISIKQPQQE Trigger: CTCTTGCTGGGGTTGCTTAATGGAGATAGTAACAGATGAAGACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTTACGTAGTGAGACCCTaGCTTTCAAGAAATAATAAA | + |
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Preference number: 2 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTYVVRP*LSRNNK Trigger: TTTATTATTTCTTGAAAGGCAGGGTCTCACTACGTA...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAAATTCCCATCATGGCTTGTCTTCATCTGTTACTATCTCCATTAAGCAAGGCAGAATGGGAGGCTaGCTCTTCCAGGCCATTAAT | + |
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Preference number: 2 (lower is better) Translates to: LPNSHHGLSSSVTISIKQGRMGG*LFQAIN Trigger: ATTAATGGCCTGGAAGAGGCAGCCTCCCATTCTGCC...TTGCTTAATGGAGATAGTAACAGATGAAGACAAGCCATGATGGGAATTTGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CAA 90 bp | GGAGAGGGATTACCATCAGGTCAGACCAAAATCTACTTTTTAATCTaGAAGCTGATGCCATTGGCCTCATCTAGATCTGGGAAGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: GEGLPSGQTKIYFLI*KLMPLASSRSGKHK Trigger: CTTGTGCTTCCCAGATCTAGATGAGGCCAATGGCATCAGCTTCAAGATTAAAAAGTAGATTTTGGTCTGACCTGATGGTAATCCCTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | AATTTCTGCTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAACTCACCTCCCAGATCTAGTTTGCTCTTTTaGCTGCTAGTCCACAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: NFCCLSPKGASLLNSPPRSSLLF*LLVHKG Trigger: TCCCTTGTGGACTAGCAGTCAAAAGAGCAAACTAGA...TCTGGGAGGTGAGTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATACCAGCTCCAGATTCTTaGGAAAAGATAGAACCACGA | + |
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Preference number: 2 (lower is better) Translates to: LDRGFLYLLACLGSIIEIPAPDS*EKIEPR Trigger: TCGTGGTTCTATCTTTTCCCAAGAATCTGGAGCTGG...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATATGGTCATCTTTTCTCTaGCCTGCTCATCAAAGTATC | + |
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Preference number: 2 (lower is better) Translates to: LDRGFLYLLACLGSIIEIWSSFL*PAHQSI Trigger: GATACTTTGATGAGCAGGTCAGAGAAAAGATGACCA...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCCCTGTCTCTGCTAATTaGTTCTCTGCAGACTCTACG | + |
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Preference number: 2 (lower is better) Translates to: KTEHFIGITFINMISLRGPVSAN*FSADST Trigger: CGTAGAGTCTGCAGAGAATCAATTAGCAGAGACAGG...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCAACAGGTTTTCCAATTaGCGTGCACTGAATGACGGT | + |
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Preference number: 2 (lower is better) Translates to: KTEHFIGITFINMISLRGNRFSN*RALNDG Trigger: ACCGTCATTCAGTGCACGTCAATTGGAAAACCTGTT...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTACCCAGTTACTTTCCTTCCTTTGAATGCTGACTTTCTAGACTTTTCTCAGAGTCTCACAGCTTCTTaGAAAACTGCTGAAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: IYPVTFLPLNADFLDFSQSLTAS*KTAETG Trigger: ACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACT...CTGAGAAAAGTCTAGAAAGTCAGCATTCAAAGGAAGGAAAGTAACTGGGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR CCA 72 bp | CGGAACAGGACAGGTGCAGGTGGGTTGTCAGGGTCCTaGGGGGTTGCCTCCGGGTCATCACTGTCTGACCTT | + |
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Preference number: 3 (lower is better) Translates to: RNRTGAGGLSGS*GVASGSSLSDL Trigger: AAGGTCAGACAGTGATGACCCGGAGGCAACCCCCCAGGACCCTGACAACCCACCTGCACCTGTCCTGTTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR GCA 72 bp | TCTGACCTTTCAGCTATAGCCTCCTCTCCATCTTCATaGTGCCAGTCCCTCTGCCCTGGCTTCTCCGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SDLSAIASSPSS*CQSLCPGFSVS Trigger: TGAGACGGAGAAGCCAGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGAGGCTATAGCTGAAAGGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR TCA 72 bp | ATGGGAGGCTGCCTCTTCCAGGCCATTAATGGGCAATaGAATGACCTGGGCACTCATCAGGGCTTCCATCTC | + |
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Preference number: 3 (lower is better) Translates to: MGGCLFQAINGQ*NDLGTHQGFHL Trigger: GAGATGGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCCCATTAATGGCCTGGAAGAGGCAGCCTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR CCA 72 bp | CCTAATCCCAAAGCCCAAGACAAGCTTCTTACCACTTaGGCTTCGGAACAGGACAGGTGCAGGTGGGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: PNPKAQDKLLTT*ASEQDRCRWVV Trigger: GACAACCCACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGATTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
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| 3UTR GCA 72 bp | AGTTCACTTCCAAAGCCGTCTCGGATCCTGAGGCCCTaGGTTAGACAGGGGTTTCTTGTACCTTCTTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SSLPKPSRILRP*VRQGFLVPSCL Trigger: CAAGCAAGAAGGTACAAGAAACCCCTGTCTAACGCAGGGCCTCAGGATCCGAGACGGCTTTGGAAGTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| 3UTR GCA 72 bp | AGGTTTGAACCCAAGGCCTTGTGCATACTAGGCAAGTaGTCTACCACTGAGCTAGATAGATCCCCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RFEPKALCILGK*STTELDRSPAP Trigger: TGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCCTAGTATGCACAAGGCCTTGGGTTCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR GCA 72 bp | CAAGACCTGAAGGGTCCTACACTCATGTACTTGATCTaGAGGAGGAAGGACTGCAGAGACCAGAATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QDLKGPTLMYLI*RRKDCRDQNEE Trigger: TTCCTCATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACCCTTCAGGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR CCA 72 bp | GGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATaGGAGTTTGAACCAGAGCTTTTGCCATACTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GFSTSWETGYLR*EFEPELLPYLT Trigger: TGTCAAGTATGGCAAAAGCTCTGGTTCAAACTCCCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| 3UTR CCA 72 bp | AGCACCCATTGGCTGCATGACTCTATACTAGGTGTGTaGAGTGTAGGAGAAACAGATGACTCCTGTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: STHWLHDSILGV*SVGETDDSCGH Trigger: ATGCCCACAGGAGTCATCTGTTTCTCCTACACTCCACACACCTAGTATAGAGTCATGCAGCCAATGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTATGTCTTTAACCCAGTaGCCAGTTTTCATGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTMSLTQ*PVFMVM Trigger: CATCACCATGAAAACTGGCAACTGGGTTAAAGACAT...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR TCA 72 bp | CTTGATCTGCAGGAGGAAGGACTGCAGAGACCAGAATaGGGAAAGAAGCAAGACCAGTGTATCTTCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDLQEEGLQRPE*GKKQDQCIFNL Trigger: CAGGTTGAAGATACACTGGTCTTGCTTCTTTCCTCATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR GCA 72 bp | GACCAAGCTGGTAAGTGGTTCCACATCCAGTTTCATTaGTCCTCAAACCTAATCCCAAAGCCCAAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DQAGKWFHIQFH*SSNLIPKPKTS Trigger: GCTTGTCTTGGGCTTTGGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGGAACCACTTACCAGCTTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCAGCTCCAGATTCTaGGGAAAAGATAGAACCACG | + |
|
Preference number: 3 (lower is better) Translates to: MYRFCVCVCVCVCVCVCVPSSRF*GKDRTT Trigger: CGTGGTTCTATCTTTTCCCAAGAATCTGGAGCTGGG...CACACACACACACACACACACACACACACACACACACACACAAAACCTGTACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTTGTCCACATCCAGTTTCATaGCTCCTCAAACCTAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: KELPLSESHCCQIPIMACPHPVS*LLKPNP Trigger: GGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGG...ACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR TCA 72 bp | CGTGCACTGAATGACGGTGTGAGTGAAGGATACAGGTaGGATCCACAGCATATACCACCATATCTTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RALNDGVSEGYR*DPQHIPPYLLS Trigger: TGAGAGAAGATATGGTGGTATATGCTGTGGATCTCACCTGTATCCTTCACTCACACCGTCATTCAGTGCACG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR GCA 72 bp | GTGCTTTTAGCAAAGGAACAGAGGATGGTTATATCCTaGCTGAAGGTTCCCAAGGAAAGAGAGGGAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLLAKEQRMVIS*LKVPKEREGRF Trigger: GAACCTTCCCTCTCTTTCCTTGGGAACCTTCAGGCAGGATATAACCATCCTCTGTTCCTTTGCTAAAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR TCA 72 bp | GAAATGGCAATTAGTACTGAGCACCCATTGGCTGCATaGCTCTATACTAGGTGTGTGGAGTGTAGGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EMAISTEHPLAA*LYTRCVECRRN Trigger: GTTTCTCCTACACTCCACACACCTAGTATAGAGTCATGCAGCCAATGGGTGCTCAGTACTAATTGCCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR GCA 72 bp | CAAGACCAGTGTATCTTCAACCTGACACATGTCCACTaGAGGTCCCTCTTTAGTGCTTTTAGCAAAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: QDQCIFNLTHVH*RSLFSAFSKGT Trigger: TGTTCCTTTGCTAAAAGCACTAAAGAGGGACCTGCAGTGGACATGTGTCAGGTTGAAGATACACTGGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| 3UTR TCA 72 bp | TTAAGCACTGACTATGACAGCAGCTTTTCTCGAGTATaGGTCTCTCGGTGTTTACTAAGGGCAGAGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSTDYDSSFSRV*VSRCLLRAELL Trigger: TAAGAGCTCTGCCCTTAGTAAACACCGAGAGACTCATACTCGAGAAAAGCTGCTGTCATAGTCAGTGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| 3UTR TCA 72 bp | TACCTCATGGGAGACCGGATACCTGAGATGGGAGTTTaGACCAGAGCTTTTGCCATACTTGACATATTTATA | + |
|
Preference number: 3 (lower is better) Translates to: YLMGDRIPEMGV*TRAFAILDIFI Trigger: TATAAATATGTCAAGTATGGCAAAAGCTCTGGTTCAAACTCCCATCTCAGGTATCCGGTCTCCCATGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| 3UTR TCA 72 bp | TTAAGTGAGCGAAATGGCCCAAGTCTCACAGCTTCTTaGAAAACTGCTGAAACAGGTTTTCCAATTGACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSERNGPSLTAS*KTAETGFPIDV Trigger: CACGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGCCATTTCGCTCACTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR GCA 72 bp | AGTTTTCATGGTGATGTACACCTGTACTTCTATACTTaGAATTTGAAGACTGAGGCAGTCGGATCTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SFHGDVHLYFYT*NLKTEAVGSLR Trigger: TCTCAGAGATCCGACTGCCTCAGTCTTCAAATTGCAAGTATAGAAGTACAGGTGTACATCACCATGAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CCA 72 bp | TTAGGGTATAGTGTGTTTTACCTATACTTGAGGAAATaGCAATTAGTACTGAGCACCCATTGGCTGCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGYSVFYLYLRK*QLVLSTHWLHD Trigger: GTCATGCAGCCAATGGGTGCTCAGTACTAATTGCCATTTCCTCAAGTATAGGTAAAACACACTATACCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATAATCTACTTTTTAATCTaGAAGCTGATGCCATTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LDRGFLYLLACLGSIIEIIYFLI*KLMPLA Trigger: GGCCAATGGCATCAGCTTCAAGATTAAAAAGTAGAT...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCTTAGACAGGGGTTTCTaGTACCTTCTTGCTTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSLRYKTFGTICLLIPLCLDRGF*YLLACL Trigger: TAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR GCA 72 bp | CTGCTCATCAAAGTATCTTCAATAGACAGTAATTTCTaGTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLIKVSSIDSNF*CLSPKGASLLN Trigger: GTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATTACTGTCTATTGAAGATACTTTGATGAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CCA 72 bp | ATACTTGACATATTTATAAGGTCTGTCTTCCAAGCCTaGCCTCTGATAGGTCAGGACTTTACCTATATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILDIFIRSVFQA*PLIGQDFTYIL Trigger: AAGAATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATGTCAAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| 3UTR CCA 72 bp | GAAGAGAAACAGAAGCAGTTTAAGATACAAGACATTTaGAACCATCTGTCTACTAATACCCTTATGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EEKQKQFKIQDI*NHLSTNTLMPV Trigger: AACAGGCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCTTCTGTTTCTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR TCA 72 bp | TTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTaGGATACCATTTTCCCTTTATTGCTAATGTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: FLVPSCLLRQHN*DTIFPLLLMLL Trigger: AAGTAACATTAGCAATAAAGGGAAAATGGTATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | GACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGCTCAGCATCACTGCCTaGCTGGGCAGAATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRCNLDGEEEEEAAAARRLSITA*LGRMGG Trigger: GCCTCCCATTCTGCCCAGGCAGGCAGTGATGCTGAG...CCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | GACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGACTTGGCTGTTCCTGTaGCAGTTTCGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DRCNLDGEEEEEAAAARRTWLFL*QFRSAS Trigger: CGAAGCGCTCCGAAACTGTCACAGGAACAGCCAAGT...CCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | GACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGAACTGGCTGTTGCGGTaGCAGTTTTGGAGGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DRCNLDGEEEEEAAAARRNWLLR*QFWRAS Trigger: CGAAGCCCTCCAAAACTGTCACCGCAACAGCCAGTT...CCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | AGCTATAGCCTCCTCTCCATCTTCATGCTGCCAGTCCCTCTGCCCTGGCTTCTCTCATCAAATACCCAGTaGCCCTGTTCCACCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYSLLSIFMLPVPLPWLLSSNTQ*PCSTQQ Trigger: CTGCTGGGTGGAACAGGGTCACTGGGTATTTGATGA...GAGAAGCCAGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGAGGCTATAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCATCTTGGATACACCCTTaGGCTGGGGTTCCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TRDRCNLDGEEEEEAAAASWIHP*AGVPLT Trigger: AGTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGA...TGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTCCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGGGAACCAGTCCCTCTGCCCTaGCTTCTCCGTCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GKCSTTELDRSPAPDSWEPVPLP*LLRLSI Trigger: GATGCTGAGACGGAGAAGCCAGGGCAGAGGGACTGG...TTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCAGGGAACAACACAGGCACCGAGAGGGGAGAGGGATTACCATCAGGTCGGAGCTAAGCAGATCTaGGATCCATGGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSQGTTQAPRGERDYHQVGAKQI*DPWLSL Trigger: CAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCC...GACCTGATGGTAATCCCTCTCCCCTCTCGGTGCCTGTGTTGTTCCCTGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | TGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGGAAAAGCGGGTCATCACTGTCTaGCCTTTCAGCTATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNLDGEEEEEAAAARREKRVITV*PFSYSL Trigger: GAGGCTATAGCTGAAAGGTCAGACAGTGATGACCCG...CTTTTCCCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCATCCTTTGGGTTCATCTaGTCCTGTAGTCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRDRCNLDGEEEEEAAAASFGFI*SCSLRA Trigger: AGCCCTGAGACTACAGGAGCAGATGAACCCAAAGGA...TGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTCCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGGGAATCGGAACAGGACAGGTaGAGGTGGGTTGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKCSTTELDRSPAPDSWESEQDR*RWVVRV Trigger: GACCCTGACAACCCACCTGCACCTGTCCTGTTCCGA...TTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAGGAAATCCGCTCCTTTaGAAAGGTCTGAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRDRCNLDGEEEEEAAAAGNPLL*KGLRFS Trigger: GGAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCC...TGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTCCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGGCCAGCTGGGCACAAAGCAGGAAAGGACTTCGCAAGTGCTACAGTTTCCGTGGATGACCACTCTTaGCCTTCCTGTAGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRPAGHKAGKDFASATVSVDDHS*PSCSSS Trigger: AGAAGAGCTACAGGAAGGTCAAGAGTGGTCATCCAC...GGAAACTGTAGCACTTGCGAAGTCCTTTCCTGCTTTGTGCCCAGCTGGCCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTTCCGAGTGCATTTCCTaGCCCTTCACAGAGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTSECIS*PFTETV Trigger: CACAGTCTCTGTGAAGGGGCAGGAAATGCACTCGGA...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGCCGTCTCAGCATCACTaGCTGCCTGGGCAGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWPSQHH*LPGQNG Trigger: CCCATTCTGCCCAGGCAGGCAGTGATGCTGAGACGG...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGGGAACCAGTGTACACCACTTaGGCTTCGGAACAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKCSTTELDRSPAPDSWEPVYTT*ASEQDR Trigger: CCTGTCCTGTTCCGAAGCCCAAGTGGTGTACACTGG...TTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTTGAACCCAAGGCCTTGTGCATACTAGGCAAGTGCTCTACCACTGAGGGTGGGGCAGCAACTTaGGCACTCACTAAAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFEPKALCILGKCSTTEGGAAT*ALTKAS Trigger: GGATGCTTTAGTGAGTGCCCAAGTTGCTGCCCCACC...CTCAGTGGTAGAGCACTTGCCTAGTATGCACAAGGCCTTGGGTTCAAACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGTTCCCATAGTTGGCTaGAAGCCTCCCGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIVPIVG*KPPGAQ Trigger: CTGGGCCCCGGGAGGCTTTCAGCCAACTATGGGAAC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTGTGTCTGATGAGGCGTaGACTCCGACTGAAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTVSDEA*TPTEAF Trigger: AAAAGCTTCAGTCGGAGTGCACGCCTCATCAGACAC...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCAGCTGGGCACAAAGCAGGAAAGGACTTCGCAAGTGCTACAGTTTCCTCCTGTGTTGCCTTTTaGGACATCCTTCTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPAGHKAGKDFASATVSSCVAF*DILLLG Trigger: TCCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGA...GGAAACTGTAGCACTTGCGAAGTCCTTTCCTGCTTTGTGCCCAGCTGGCCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCGCATCACTGCCTGCCTaGGCAGAATGGGAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTASLPA*AEWEAA Trigger: GGCAGCCTCCCATTCTGCCCAGGCAGGCAGTGATGC...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCTGCTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAACTCACCTCCCAGAGCATCACTGCCTGCCTaGGCAGAATGGGAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFCCLSPKGASLLNSPPRASLPA*AEWEAA Trigger: GGCAGCCTCCCATTCTGCCCAGGCAGGCAGTGATGC...TCTGGGAGGTGAGTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCAGCTGGGCACAAAGCAGGAAAGGACTTCGCAAGTGCTACAGTTTCCGGTACGACATTGCTCTaGGGTTCTAAGGAAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PRPAGHKAGKDFASATVSGTTLL*GSKEAI Trigger: TATGGCTTCCTTAGAACCCCAGAGCAATGTCGTACC...GGAAACTGTAGCACTTGCGAAGTCCTTTCCTGCTTTGTGCCCAGCTGGCCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGGAAAAGACCGGATACCTGAGATaGGAGTTTGAACCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNLDGEEEEEAAAARREKTGYLR*EFEPEL Trigger: AAGCTCTGGTTCAAACTCCCATCTCAGGTATCCGGT...CTTTTCCCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGACTTGGCTGTTCCTGTaGCAGTTTCGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWTWLFL*QFRSAS Trigger: CGAAGCGCTCCGAAACTGTCACAGGAACAGCCAAGT...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | AAGGAACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTTGTACTTGGCTGTTCCTGTaGCAGTTTCGGAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KELPLSESHCCQIPIMACTWLFL*QFRSAS Trigger: CGAAGCGCTCCGAAACTGTCACAGGAACAGCCAAGT...ACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGGTTTGAACCCAAGGCCTTGTGCATACTAGGCAAGTGCTCTACCACTGAGCCTGTGTGGGTTCTGTaGTGTGCATGCAAGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRFEPKALCILGKCSTTEPVWVL*CACKSE Trigger: TTCTGACTTGCATGCACATCACAGAACCCACACAGG...CTCAGTGGTAGAGCACTTGCCTAGTATGCACAAGGCCTTGGGTTCAAACCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTAACAATTCTACAATCTaGTCCTTGGTCCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTNNSTI*SLVRTS Trigger: GGAGGTGCGGACCAAGGAGCAGATTGTAGAATTGTT...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCTCAGCATCACTGCCTaGCTGGGCAGAATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYILSITA*LGRMGG Trigger: GCCTCCCATTCTGCCCAGGCAGGCAGTGATGCTGAG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGCCGTCTCAGCATCACTaGCTGCCTGGGCAGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTPSQHH*LPGQNG Trigger: CCCATTCTGCCCAGGCAGGCAGTGATGCTGAGACGG...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCCAGTCCCTCTGCCCTaGCTTCTCCGTCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIPVPLP*LLRLSI Trigger: GATGCTGAGACGGAGAAGCCAGGGCAGAGGGACTGG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | AAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTGCAGGTGGTAATGGAATCTTCTaGAGCGCTGTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPKTSFLPLGLRNRTGAGGNGIF*SAVVSF Trigger: AAAGCTTACGACAGCGCTTCAGAAGATTCCATTACC...ACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGGGAGCTAAGCAGATCTaGGATCCATGGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWGAKQI*DPWLSL Trigger: CAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCC...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | AAGGAACTGCCCCTTTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTTGTGGAGCTAAGCAGATCTaGGATCCATGGCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KELPLSESHCCQIPIMACGAKQI*DPWLSL Trigger: CAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCC...ACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAAAGGGGCAGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCATTAATGGGCAATGAAATGACCTGGGCACTCATCAGGGCTTCCATCAACAATTCTACAATCTaGTCCTTGGTCCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRPLMGNEMTWALIRASINNSTI*SLVRTS Trigger: GGAGGTGCGGACCAAGGAGCAGATTGTAGAATTGTT...GATGGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCCCATTAATGGCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTCGGAACAGGACAGGTaGAGGTGGGTTGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTSEQDR*RWVVRV Trigger: GACCCTGACAACCCACCTGCACCTGTCCTGTTCCGA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACGATACACCCTTGGGCTaGGGTTCCACTGACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYDTPLG*GSTDSC Trigger: GCAGGAGTCAGTGGAACCCCAGCCCAAGGGTGTATC...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCTGCTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAACTCACCTCCCAGAGATACACCCTTGGGCTaGGGTTCCACTGACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFCCLSPKGASLLNSPPRDTPLG*GSTDSC Trigger: GCAGGAGTCAGTGGAACCCCAGCCCAAGGGTGTATC...TCTGGGAGGTGAGTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGGAAAAGAGGTTCTCTCTCTCTTaGATGGTAATAGACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNLDGEEEEEAAAARREKRFSLS*MVIDWF Trigger: GAACCAGTCTATTACCATCCAAGAGAGAGAGAACCT...CTTTTCCCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGGGCAATGAAATGACCTaGGCACTCATCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWGNEMT*ALIRAS Trigger: GGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCC...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTCAGGTTTCTAGTGCTTaGCCATTCTTGACTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTQVSSA*PFLTFR Trigger: TCGGAAAGTCAAGAATGGCCAAGCACTAGAAACCTG...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | AAGAGCCAAGACCTGAAGGGTCCTACACTCATGTACTaGATCTGCAGGAGGAAGGACTGCAGAGACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSQDLKGPTLMY*ICRRKDCRDQN Trigger: ATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACCCTTCAGGTCTTGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTAACTGGCTGTTGCGGTaGCAGTTTTGGAGGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYINWLLR*QFWRAS Trigger: CGAAGCCCTCCAAAACTGTCACCGCAACAGCCAGTT...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGAGCCATGCTGCTTTCCTCTCAGCAGTATCCACAGCTCAGTACAACTAGCTTTTCTCGAGTATaGGTCTCTCGGTGTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: PPRAMLLSSQQYPQLSTTSFSRV*VSRCLL Trigger: TAGTAAACACCGAGAGACTCATACTCGAGAAAAGCT...AGTTGTACTGAGCTGTGGATACTGCTGAGAGGAAAGCAGCATGGCTCTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | AGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTGCAGGTGGGTTGTAGTCTGACTGAGAATTaGAAGGAGTGTTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQASYHLGFGTGQVQVGCSLTEN*KECSSL Trigger: GAGACTAGAACACTCCTTGCAATTCTCAGTCAGACT...ACAACCCACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTCCTCTCCATCTTCATaGTGCCAGTCCCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTSSPSS*CQSLCP Trigger: AGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | CCTAGGCCAGCTGGGCACAAAGCAGGAAAGGACTTCGCAAGTGCTACAGTTTCCAGTCTCACTGAGAATTaGAAGGTAAGTCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRPAGHKAGKDFASATVSSLTEN*KVSLGF Trigger: GAAACCAAGACTTACCTTGCAATTCTCAGTGAGACT...GGAAACTGTAGCACTTGCGAAGTCCTTTCCTGCTTTGTGCCCAGCTGGCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCCAGTGTACACCACTTaGGCTTCGGAACAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIPVYTT*ASEQDR Trigger: CCTGTCCTGTTCCGAAGCCCAAGTGGTGTACACTGG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCAGCTGGGCACAAAGCAGGAAAGGACTTCGCAAGTGCTACAGTTTCCGGTTATAACAGCCTCTaGAGGTATTTCAGTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRPAGHKAGKDFASATVSGYNSL*RYFSII Trigger: GATGATACTGAAATACCTCCAGAGGCTGTTATAACC...GGAAACTGTAGCACTTGCGAAGTCCTTTCCTGCTTTGTGCCCAGCTGGCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCGTTCCCATAGTTGGCTaGAAGCCTCCCGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRYKTFGTICLLIPLCVPIVG*KPPGAQ Trigger: CTGGGCCCCGGGAGGCTTTCAGCCAACTATGGGAAC...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCCTTCACAGAGACTGTaGCCGAATGTCCAGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIPSQRL*PNVQVF Trigger: GAAGACCTGGACATTCGGTCACAGTCTCTGTGAAGG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACTCATCAAATACCCAGTaGCCCTGTTCCACCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYSSNTQ*PCSTQQ Trigger: CTGCTGGGTGGAACAGGGTCACTGGGTATTTGATGA...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGTCATCAAATACCCAGTaGCCCTGTTCCACCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTSSNTQ*PCSTQQ Trigger: CTGCTGGGTGGAACAGGGTCACTGGGTATTTGATGA...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCGGGTCATCACTGTCTaGCCTTTCAGCTATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYRVITV*PFSYSL Trigger: GAGGCTATAGCTGAAAGGTCAGACAGTGATGACCCG...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTCCGAGTGCATTTCCTaGCCCTTCACAGAGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTSECIS*PFTETV Trigger: CACAGTCTCTGTGAAGGGGCAGGAAATGCACTCGGA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGGCAGAATGGGAGGCTaGCTCTTCCAGGCCATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIGRMGG*LFQAIN Trigger: ATTAATGGCCTGGAAGAGGCAGCCTCCCATTCTGCC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGGGCAGAATGGGAGGCTaGCTCTTCCAGGCCATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTGRMGG*LFQAIN Trigger: ATTAATGGCCTGGAAGAGGCAGCCTCCCATTCTGCC...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGTTCTGTACCCAGTTCTaGATCTCCACAGGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWFCTQF*ISTGST Trigger: TGTGCTACCTGTGGAGATCCAGAACTGGGTACAGAA...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTTCTTGGATACACCCTTaGGCTGGGGTTCCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYISWIHP*AGVPLT Trigger: AGTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGA...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTTGCCCTCTCTTTCTTaGATACACCCTTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTLPSLS*IHPWAG Trigger: CCCAGCCCAAGGGTGTATCCAAGAAAGAGAGGGCAA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | GGTAAGTGGTTCCACATCCAGTTTCATTGCTCCTCAAACCTAATCCCAAAGCCCTCCTGTGTTGCCTTTTaGGACATCCTTCTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKWFHIQFHCSSNLIPKPSCVAF*DILLLG Trigger: TCCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGA...GGGCTTTGGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGGAACCACTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAAAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTAGGTTCTCTCTCTCTTaGATGGTAATAGACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPKPKTSFLPLGLRNRTGRFSLS*MVIDWF Trigger: GAACCAGTCTATTACCATCCAAGAGAGAGAGAACCT...ACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTTTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGTGGATGACCACTCTTaGCCTTCCTGTAGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIVDDHS*PSCSSS Trigger: AGAAGAGCTACAGGAAGGTCAAGAGTGGTCATCCAC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGTCATCTTCTCCGAGTaGATTTCCTGCCCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIVIFSE*ISCPFT Trigger: TGTGAAGGGGCAGGAAATGCACTCGGAGAAGATGAC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACTCCTTTGGGTTCATCTaGTCCTGTAGTCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYSFGFI*SCSLRA Trigger: AGCCCTGAGACTACAGGAGCAGATGAACCCAAAGGA...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | TGGTTCCACATCCAGTTTCATTGCTCCTCAAACCTAATCCCAAAGCCCAAGACAGACTGGTTCCTGTGTTaGCTTTTGGGACATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFHIQFHCSSNLIPKPKTDWFLC*LLGHPS Trigger: AGAAGGATGTCCCAAAAGGCAACACAGGAACCAGTC...TGTCTTGGGCTTTGGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCACATCCAGTTTCATTGCTCCTCAAACCTAATCCCAAAGCCCAAGACATTCTGTACCCAGTTCTaGATCTCCACAGGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WFHIQFHCSSNLIPKPKTFCTQF*ISTGST Trigger: TGTGCTACCTGTGGAGATCCAGAACTGGGTACAGAA...TGTCTTGGGCTTTGGGATTAGGTTTGAGGAGCAATGAAACTGGATGTGGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATACTGGTCATCACTAGGTaGGGCAGCAACTTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LDRGFLYLLACLGSIIEILVITR*GSNLGT Trigger: AGTGCCCAAGTTGCTGCCCCACCTAGTGATGACCAG...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCCATTAATGGGCAATGAAATGACCTGGGCACTCATCAGGGCTTCCATCATTGGGTTTAGGAAATaGAAATCCGAATGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRPLMGNEMTWALIRASIIGFRK*KSECPG Trigger: ACCTGGACATTCGGATTTCCATTTCCTAAACCCAAT...GATGGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCCCATTAATGGCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGGAAATCCGCTCCTTTaGAAAGGTCTGAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIGNPLL*KGLRFS Trigger: GGAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | GGTCCTACACTCATGTACTTGATCTGCAGGAGGAAGGACTGCAGAGACCAGAATAAAATTCAGTCTGACTaGGAATTGCAAGGAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPTLMYLICRRKDCRDQNKIQSD*ELQGVF Trigger: GAACACTCCTTGCAATTCTCAGTCAGACTGAATTTT...ATTCTGGTCTCTGCAGTCCTTCCTCCTGCAGATCAAGTACATGAGTGTAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGAGAACTGAGTCTCACTaGGAATTGCAAGGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAHLYGFSTSWETGYLRWRTESH*ELQGKS Trigger: AGACTTACCTTGCAATTCTCAGTGAGACTCAGTTCT...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | ATGTACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTGTTCCTCTCTTTaGGTCTTTTCCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MYRFCVCVCVCVCVCVCVLCSSL*VFSHWL Trigger: AAGCCAGTGGGAAAAGACTCAAAGAGAGGAACAAAG...CACACACACACACACACACACACACACACACACACACACACAAAACCTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTAACAATTCTACAATCTaGTCCTTGGTCCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYINNSTI*SLVRTS Trigger: GGAGGTGCGGACCAAGGAGCAGATTGTAGAATTGTT...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATGTACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCATTTTCTGGACATTaGTTCTGTACCCAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MYRFCVCVCVCVCVCVCVPFSGH*FCTQFW Trigger: CCAGAACTGGGTACAGAAGCAATGTCCAGAAAATGG...CACACACACACACACACACACACACACACACACACACACACAAAACCTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGACTGGTTCCTGTGTTaGCTTTTGGGACATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIDWFLC*LLGHPS Trigger: AGAAGGATGTCCCAAAAGGCAACACAGGAACCAGTC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | AATTTCTGCTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAACTCACCTCCCAGAGACTGGTTCCTGTGTTaGCTTTTGGGACATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFCCLSPKGASLLNSPPRDWFLC*LLGHPS Trigger: AGAAGGATGTCCCAAAAGGCAACACAGGAACCAGTC...TCTGGGAGGTGAGTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTTCCTCTCCATCTTCATaGTGCCAGTCCCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLSSPSS*CQSLCP Trigger: AGGGCAGAGGGACTGGCAGCATGAAGATGGAGAGGA...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGTTCTGTACCCAGTTCTaGATCTCCACAGGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTFCTQF*ISTGST Trigger: TGTGCTACCTGTGGAGATCCAGAACTGGGTACAGAA...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTTCCTGTGTTGCCTTTTaGGACATCCTTCTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYISCVAF*DILLLG Trigger: TCCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGA...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGGTACGACATTGCTCTaGGGTTCTAAGGAAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIGTTLL*GSKEAI Trigger: TATGGCTTCCTTAGAACCCCAGAGCAATGTCGTACC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGGTAATGGAATCTTCTaGAGCGCTGTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIGNGIF*SAVVSF Trigger: AAAGCTTACGACAGCGCTTCAGAAGATTCCATTACC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTTTGTTCCTCTCTTTaGGTCTTTTCCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYLCSSL*VFSHWL Trigger: AAGCCAGTGGGAAAAGACTCAAAGAGAGGAACAAAG...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCCATTTTCTGGACATTaGTTCTGTACCCAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYPFSGH*FCTQFW Trigger: CCAGAACTGGGTACAGAAGCAATGTCCAGAAAATGG...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACGGTTCCACTGACTCCTaGAGAACACTTAATAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYGSTDS*RTLNNS Trigger: GGAGTTATTAAGTGTTCTGCAGGAGTCAGTGGAACC...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTGGCAATGAAATGACCTaGGCACTCATCAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLGNEMT*ALIRAS Trigger: GGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCC...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCAGGTTTCTAGTGCTTaGCCATTCTTGACTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIQVSSA*PFLTFR Trigger: TCGGAAAGTCAAGAATGGCCAAGCACTAGAAACCTG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTTCTGTCTTCCAAGCCTaGCCTCTGATAGGTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLSVFQA*PLIGQD Trigger: GTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGA...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAAGGCTTGAGCTCTaGTTGAAGCGTTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: MYRFCVCVCVCVCVCVCVIRLEL*LKRFPH Trigger: ATGTGGAAAACGCTTCAACCAGAGCTCAAGCCTTAT...CACACACACACACACACACACACACACACACACACACACACAAAACCTGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | CATGGTGATGTACACCTGTACTTCTATACTTGCAATTaGAAGACTGAGGCAGTCGGATCTCTGAGATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGDVHLYFYTCN*KTEAVGSLRSR Trigger: CCTTGATCTCAGAGATCCGACTGCCTCAGTCTTCAAATTGCAAGTATAGAAGTACAGGTGTACATCACCATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | TTTCTCACCCACCTAGCATCAGTTTTACAACTAGTTTaGGACAGTCTGCCCCACTCCAATTTACCCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLTHLASVLQLV*DSLPHSNLPSY Trigger: GTAACTGGGTAAATTGGAGTGGGGCAGACTGTCCAAAACTAGTTGTAAAACTGATGCTAGGTGGGTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTCCTTTGAAAAGGTCTaGGATTCTCCTTTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTSFEKV*DSPLGS Trigger: TGAACCCAAAGGAGAATCTCAGACCTTTTCAAAGGA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCAGTCTGACTGAGAATTaGAAGGAGTGTTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTSLTEN*KECSSL Trigger: GAGACTAGAACACTCCTTGCAATTCTCAGTCAGACT...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCAATTTGGTACGACATTaGTCTGGGGTTCTAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTNLVRH*SGVLRK Trigger: CTTCCTTAGAACCCCAGAGCAATGTCGTACCAAATT...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCTTGCCCTCTCTTTCTTaGATACACCCTTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRYKTFGTICLLIPLCLPSLS*IHPWAG Trigger: CCCAGCCCAAGGGTGTATCCAAGAAAGAGAGGGCAA...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCAGGTTCTCTCTCTCTTaGATGGTAATAGACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTRFSLS*MVIDWF Trigger: GAACCAGTCTATTACCATCCAAGAGAGAGAGAACCT...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| 3UTR CAA 72 bp | TTCAGAATCACACTGCTGCCAAATTCCCATCATGGCTaGTCTTCATCTGTTACTATCTCCATTAAGCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: FRITLLPNSHHG*SSSVTISIKQP Trigger: GGGTTGCTTAATGGAGATAGTAACAGATGAAGACAAGCCATGATGGGAATTTGGCAGCAGTGTGATTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATAGGTAATGGAATCTTCTaGAGCGCTGTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDRGFLYLLACLGSIIEIGNGIF*SAVVSF Trigger: AAAGCTTACGACAGCGCTTCAGAAGATTCCATTACC...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTGAGAGGCAGACTAGGTATAAACATTATTTTGCTTTATAGGAAGAGACCTTCACAGAGACTGTaGCCGAATGTCCAGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLRGRLGINIILLYRKRPSQRL*PNVQVF Trigger: GAAGACCTGGACATTCGGTCACAGTCTCTGTGAAGG...TCTCTTCCTATAAAGCAAAATAATGTTTATACCTAGTCTGCCTCTCAGGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACAAAATTCAGTCTGACTaGGAATTGCAAGGAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKVCLPSLASDRSGLYKIQSD*ELQGVF Trigger: GAACACTCCTTGCAATTCTCAGTCAGACTGAATTTT...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR TCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTCCTGAGATGGGAGTTTaGACCAGAGCTTTTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLPEMGV*TRAFAI Trigger: TATGGCAAAAGCTCTGGTTCAAACTCCCATCTCAGG...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTAGTCTCACTGAGAATTaGAAGGTAAGTCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYISLTEN*KVSLGF Trigger: GAAACCAAGACTTACCTTGCAATTCTCAGTGAGACT...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGCAAGTAATGTTCTATaGAGCTGTACTTCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIASNVL*SCTSSE Trigger: TTCTGAGGAAGTACAGCTGCATAGAACATTACTTGC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR GCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTTCTGTGTCCTCATCTTaGTTCTCAGGTTCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLSVSSS*FSGSAS Trigger: TGAGGCTGAACCTGAGAAGCAAGATGAGGACACAGA...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | TTAGACAGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATAGTGGGTTCTGTGATGTaGATGCAAGTCAGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDRGFLYLLACLGSIIEIVGSVM*MQVRTL Trigger: AAGAGTTCTGACTTGCATGCACATCACAGAACCCAC...TATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTACTGTTTCTTTCTCCTaGTCATCACTAGGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLTVSFS*SSLGGA Trigger: TGCCCCACCTAGTGATGACCAGGAGAAAGAAACAGT...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | TTACCATCAGGTCAGACCAAAATCTACTTTTTAATCTaGAAGCTGATGCCATTGGCCTCATCTAGATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSGQTKIYFLI*KLMPLASSRSG Trigger: CCCAGATCTAGATGAGGCCAATGGCATCAGCTTCAAGATTAAAAAGTAGATTTTGGTCTGACCTGATGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTGAGAGGCAGACTAGGTATAAACATTATTTTGCTTTATAGGAAGAGAGTCATCTTCTCCGAGTaGATTTCCTGCCCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISLRGRLGINIILLYRKRVIFSE*ISCPFT Trigger: TGTGAAGGGGCAGGAAATGCACTCGGAGAAGATGAC...TCTCTTCCTATAAAGCAAAATAATGTTTATACCTAGTCTGCCTCTCAGGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATACCATTTAGTCTGACTGAGAATTaGAAGGAGTGTTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGFLYLLACLGSIIEIPFSLTEN*KECSSL Trigger: GAGACTAGAACACTCCTTGCAATTCTCAGTCAGACT...AAATGGTATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCATTGGGTTTAGGAAATaGAAATCCGCTCCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTIGFRK*KSAPLK Trigger: TTTCAAAGGAGCGGATTTCCATTTCCTAAACCCAAT...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGATTGGGTTTAGGAAATaGAAATCCGCTCCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTIGFRK*KSAPLK Trigger: TTTCAAAGGAGCGGATTTCCATTTCCTAAACCCAAT...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTGTCAGCACATTTATATaGGTTCTCTACCTCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIHSIYHHIFSQHILPYLVSTFI*VLYLMG Trigger: TCCCATGAGGTAGAGAACCCATATAAATGTGCTGAC...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | CCTTGTCATTTAGGGTATAGTGTGTTTTACCTATACTaGAGGAAATGGCAATTAGTACTGAGCACCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCHLGYSVFYLY*RKWQLVLSTHW Trigger: CCAATGGGTGCTCAGTACTAATTGCCATTTCCTCAAGTATAGGTAAAACACACTATACCCTAAATGACAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCTCCTTTGAAAAGGTCTaGGATTCTCCTTTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLRYKTFGTICLLIPLCSFEKV*DSPLGS Trigger: TGAACCCAAAGGAGAATCTCAGACCTTTTCAAAGGA...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCAGAACTGAGTCTCACTaGGAATTGCAAGGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRYKTFGTICLLIPLCRTESH*ELQGKS Trigger: AGACTTACCTTGCAATTCTCAGTGAGACTCAGTTCT...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCGGTTCCACTGACTCCTaGAGAACACTTAATAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTEHFIGITFINMISLRGGSTDS*RTLNNS Trigger: GGAGTTATTAAGTGTTCTGCAGGAGTCAGTGGAACC...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCAATTTGGTACGACATTaGTCTGGGGTTCTAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTEHFIGITFINMISLRGNLVRH*SGVLRK Trigger: CTTCCTTAGAACCCCAGAGCAATGTCGTACCAAATT...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTTAAGATACAAGACATTTGGAACCATCTGTCTACTAATACCCTTATGCGTGTATCCTCCTGTGTaGATTGAAATGAGAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRYKTFGTICLLIPLCVYPPV*IEMRTV Trigger: AACAGTTCTCATTTCAATGCACACAGGAGGATACAC...GCATAAGGGTATTAGTAGACAGATGGTTCCAAATGTCTTGTATCTTAAACTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCAAAATTCAGTCTGACTaGGAATTGCAAGGAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTEHFIGITFINMISLRGKIQSD*ELQGVF Trigger: GAACACTCCTTGCAATTCTCAGTCAGACTGAATTTT...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTGAGAGGCAGACTAGGTATAAACATTATTTTGCTTTATAGGAAGAGAGCAAGTAATGTTCTATaGAGCTGTACTTCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLRGRLGINIILLYRKRASNVL*SCTSSE Trigger: TTCTGAGGAAGTACAGCTGCATAGAACATTACTTGC...TCTCTTCCTATAAAGCAAAATAATGTTTATACCTAGTCTGCCTCTCAGGGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| 3UTR CAA 72 bp | CACAAAAGAGAATATAATGCAGTGTTGAGAAATACCTaGTTTCCTATTAAAATGACCAAGCTGGTAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKREYNAVLRNT*FPIKMTKLVSG Trigger: ACCACTTACCAGCTTGGTCATTTTAATAGGAAACAAGGTATTTCTCAACACTGCATTATATTCTCTTTTGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGGATCCATGGCTCTCCTaGATCCAACCTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: DRCNLDGEEEEEAAAARRDPWLS*IQPGHH Trigger: GTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATC...CCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | TGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAGGAGGGAAAAGGTTGCGGTGACAGTTTaGGAGGGCTTCGTAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: CNLDGEEEEEAAAARREKVAVTV*EGFVEL Trigger: CAGTTCTACGAAGCCCTCCAAAACTGTCACCGCAAC...CTTTTCCCTCCTTGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | AAGCCCAAGACAAGCTTCTTACCACTTGGGCTTCGGAACAGGACAGGTGCAGGTGGGACATCCTTCTCCTaGGAGCTAAGCAGATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPKTSFLPLGLRNRTGAGGTSFS*ELSRSE Trigger: CTCAGATCTGCTTAGCTCCAAGGAGAAGGATGTCCC...ACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGGTAAGAAGCTTGTCTTGGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS GCA 90 bp | TCCTGTGATGATTTCAGGGGTGTCATCTTCTCCGAGTGCATTTCCTaGCCCTTCACAGAGACTGTGACCGAATGTCCAGGTCTTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCDDFRGVIFSECIS*PFTETVTECPGLPD Trigger: GTCTGGAAGACCTGGACATTCGGTCACAGTCTCTGTGAAGGGGCAGGAAATGCACTCGGAGAAGATGACACCCCTGAAATCATCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | ATATCCTGCCTGAAGGTTCCCAAGGAAAGAGAGGGAAGGTTCAGACAGTTCCCAGATCCATGGCTCTCCTaGATCCAACCTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISCLKVPKEREGRFRQFPDPWLS*IQPGHH Trigger: GTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATC...TGGGAACTGTCTGAACCTTCCCTCTCTTTCCTTGGGAACCTTCAGGCAGGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS TCA 90 bp | TGTGTTGCCTTTTGGGACATCCTTCTCCTTGGAGCTAAGCAGATCTaGGATCCATGGCTCTCCTTGATCCAACCTGGACACCACATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CVAFWDILLLGAKQI*DPWLSLIQPGHHIG Trigger: CCCAATGTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCCAAGGAGAAGGATGTCCCAAAAGGCAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
||
| CDS CCA 90 bp | GCCTCACTGGTTCTCTGGAGGCAACAAGAAACTGTTTCTTTCTCCTaGTCATCACTAGGTGGGGCAGCAACTTGGGCACTCACTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLVLWRQQETVSFS*SSLGGAATWALTKA Trigger: TGCTTTAGTGAGTGCCCAAGTTGCTGCCCCACCTAGTGATGACCAGGAGAAAGAAACAGTTTCTTGTTGCCTCCAGAGAACCAGTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGGACAGGTGCAATTTAGATGGAGAGGAGGAGGAGGAGGCAGCGGCAGCAAACCTGGACACCACATaGGGTTTAGGAAATGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TRDRCNLDGEEEEEAAAANLDTT*GLGNGN Trigger: ATTTCCATTTCCTAAACCCAATGTGGTGTCCAGGTT...TGCTGCCGCTGCCTCCTCCTCCTCCTCTCCATCTAAATTGCACCTGTCCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCAGGGAACAACACAGGCACCGAGAGGGGAGAGGGATTACCATCAGGTCCAGGTTCTCTCTCTCTaGGATGGTAATAGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FSQGTTQAPRGERDYHQVQVLSL*DGNRLV Trigger: AACCAGTCTATTACCATCCAAGAGAGAGAGAACCTG...GACCTGATGGTAATCCCTCTCCCCTCTCGGTGCCTGTGTTGTTCCCTGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS CCA 90 bp | CAAATACCCAGTGACCCTGTTCCACCCAGCAGGTTCTCTCTCTCTTaGATGGTAATAGACTGGTTCCTGTGTTGCCTTTTGGGACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QIPSDPVPPSRFSLS*MVIDWFLCCLLGHP Trigger: AGGATGTCCCAAAAGGCAACACAGGAACCAGTCTATTACCATCCAAGAGAGAGAGAACCTGCTGGGTGGAACAGGGTCACTGGGTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGTCAGGGCTGGCCTTCTaGCCCTCTCTTTCTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SAHLYGFSTSWETGYLRWSGLAF*PSLSWI Trigger: TATCCAAGAAAGAGAGGGCAAGAAGGCCAGCCCTGA...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGGGGACATCCTTCTCCTaGGAGCTAAGCAGATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAHLYGFSTSWETGYLRWGTSFS*ELSRSE Trigger: CTCAGATCTGCTTAGCTCCAAGGAGAAGGATGTCCC...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS TCA 90 bp | TCCTTCTCCTTGGAGCTAAGCAGATCTGAGATCCATGGCTCTCCTTaGTCCAACCTGGACACCACATTGGGTTTAGGAAATGGAAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSLELSRSEIHGSP*SNLDTTLGLGNGNP Trigger: CGGATTTCCATTTCCTAAACCCAATGTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCCAAGGAGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
||
| CDS GCA 90 bp | CTTAATAACTCCTGTGATGATTTCAGGGGTGTCATCTTCTCCGAGTaGATTTCCTGCCCCTTCACAGAGACTGTGACCGAATGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNNSCDDFRGVIFSE*ISCPFTETVTECPG Trigger: ACCTGGACATTCGGTCACAGTCTCTGTGAAGGGGCAGGAAATGCACTCGGAGAAGATGACACCCCTGAAATCATCACAGGAGTTATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS GCA 90 bp | CTCTCTTTCTTGGATACACCCTTGGGCTGGGGTTCCACTGACTCCTaGAGAACACTTAATAACTCCTGTGATGATTTCAGGGGTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSFLDTPLGWGSTDS*RTLNNSCDDFRGVI Trigger: GATGACACCCCTGAAATCATCACAGGAGTTATTAAGTGTTCTGCAGGAGTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACTTCTTGGATACACCCTaGGGCTGGGGTTCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HIYKVCLPSLASDRSGLYFLDTP*GWGSTD Trigger: GTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGAA...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | AATTTCTGCTGTTTATCTCCCAAAGGAGCTAGTCTCCTAAACTCACCTCCCAGATTCTTGGATACACCCTaGGGCTGGGGTTCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NFCCLSPKGASLLNSPPRFLDTP*GWGSTD Trigger: GTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGAA...TCTGGGAGGTGAGTTTAGGAGACTAGCTCCTTTGGGAGATAAACAGCAGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCCTTGCCCTCTCTTTCTaGGATACACCCTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTLALSF*DTPLGW Trigger: CCAGCCCAAGGGTGTATCCAAGAAAGAGAGGGCAAG...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | GGCAAGTGCTCTACCACTGAGCTAGATAGATCCCCAGCTCCAGATTCTTGGGAATGGAAATCCGCTCCTTaGAAAAGGTCTGAGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKCSTTELDRSPAPDSWEWKSAP*KRSEIL Trigger: GAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCCA...TTCCCAAGAATCTGGAGCTGGGGATCTATCTAGCTCAGTGGTAGAGCACTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCGATCCATGGCTCTCCTaGATCCAACCTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTDPWLS*IQPGHH Trigger: GTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATC...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGTTCCTGTGTTGCCTTTaGGGACATCCTTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAHLYGFSTSWETGYLRWFLCCL*GHPSPW Trigger: CCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGAA...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS CCA 90 bp | TCTGTGTCCTCATCTTGCTTCTCAGGTTCAGCCTCACTGGTTCTCTaGAGGCAACAAGAAACTGTTTCTTTCTCCTGGTCATCACTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSCFSGSASLVL*RQQETVSFSWSSLG Trigger: ACCTAGTGATGACCAGGAGAAAGAAACAGTTTCTTGTTGCCTCCAGAGAACCAGTGAGGCTGAACCTGAGAAGCAAGATGAGGACACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCCATTAATGGGCAATGAAATGACCTGGGCACTCATCAGGGCTTCCATCAACCTGGACACCACATaGGGTTTAGGAAATGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRPLMGNEMTWALIRASINLDTT*GLGNGN Trigger: ATTTCCATTTCCTAAACCCAATGTGGTGTCCAGGTT...GATGGAAGCCCTGATGAGTGCCCAGGTCATTTCATTGCCCATTAATGGCCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAAAGAGAGGGAAGGTTCAGACAGTTCCCATCTAAGAACACCTCTTTTCTTCCTGTGTTGCCTTTaGGGACATCCTTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRKEREGSDSSHLRTPLFFLCCL*GHPSPW Trigger: CCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGAA...GAAAAGAGGTGTTCTTAGATGGGAACTGTCTGAACCTTCCCTCTCTTTCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTGTTGCGGTGACAGTTTaGGAGGGCTTCGTAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIVAVTV*EGFVEL Trigger: CAGTTCTACGAAGCCCTCCAAAACTGTCACCGCAAC...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGTCTCACAGCTTCTTGAAAAACTGCTGAAACAGGTTTTCCAATTGACGCTCTTACTGAAGCACTaGCCACAGTCATGGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQVSQLLEKLLKQVFQLTLLLKH*PQSWHP Trigger: TGGGTGCCATGACTGTGGCAAGTGCTTCAGTAAGAG...CGTCAATTGGAAAACCTGTTTCAGCAGTTTTTCAAGAAGCTGTGAGACTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCACATTTATATGGGTTCTCTACCTCATGGGAGACCGGATACCTGAGATGGTCTTTGTTCCTCTCTTaGAGTCTTTTCCCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAHLYGFSTSWETGYLRWSLFLS*SLFPLA Trigger: AGCCAGTGGGAAAAGACTCAAAGAGAGGAACAAAGA...CCATCTCAGGTATCCGGTCTCCCATGAGGTAGAGAACCCATATAAATGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAAAGAGAGGGAAGGTTCAGACAGTTCCCATCTAAGAACACCTCTTTTCCAGGTTCTCTCTCTCTaGGATGGTAATAGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRKEREGSDSSHLRTPLFQVLSL*DGNRLV Trigger: AACCAGTCTATTACCATCCAAGAGAGAGAGAACCTG...GAAAAGAGGTGTTCTTAGATGGGAACTGTCTGAACCTTCCCTCTCTTTCCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146243.2 |
||
| CDS-3UTR CAA 90 bp | ATGTACAGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTTCCTCTCTTaGAGTCTTTTCCCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MYRFCVCVCVCVCVCVCVSLFLS*SLFPLA Trigger: AGCCAGTGGGAAAAGACTCAAAGAGAGGAACAAAGA...CACACACACACACACACACACACACACACACACACACACACAAAACCTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS GCA 90 bp | TCAGTATCATCTTCATCATCTGAATCTTCTTCTGTGTCCTCATCTTaGTTCTCAGGTTCAGCCTCACTGGTTCTCTGGAGGCAACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSSSESSSVSSS*FSGSASLVLWRQQE Trigger: TTCTTGTTGCCTCCAGAGAACCAGTGAGGCTGAACCTGAGAAGCAAGATGAGGACACAGAAGAAGATTCAGATGATGAAGATGATACTGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | ATTTACCCAGTTACTTTCCTTCCTTTGAATGCTGACTTTCTAGACTTTTCTCAGCTTGCCCTCTCTTTCTaGGATACACCCTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYPVTFLPLNADFLDFSQLALSF*DTPLGW Trigger: CCAGCCCAAGGGTGTATCCAAGAAAGAGAGGGCAAG...CTGAGAAAAGTCTAGAAAGTCAGCATTCAAAGGAAGGAAAGTAACTGGGTAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTGGAAATCCGCTCCTTaGAAAAGGTCTGAGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTWKSAP*KRSEIL Trigger: GAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCCA...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTGGGACATCCTTCTCCTaGGAGCTAAGCAGATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EIHSIYHHIFSQHILPYLGTSFS*ELSRSE Trigger: CTCAGATCTGCTTAGCTCCAAGGAGAAGGATGTCCC...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCTATATTCAGGTTCTCTCTCTCTaGGATGGTAATAGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRSVFQAWPLIGQDFTYIQVLSL*DGNRLV Trigger: AACCAGTCTATTACCATCCAAGAGAGAGAGAACCTG...AATATAGGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | ATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACCAACCTGGACACCACATaGGGTTTAGGAAATGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFIRSVFQAWPLIGQDFTNLDTT*GLGNGN Trigger: ATTTCCATTTCCTAAACCCAATGTGGTGTCCAGGTT...GGTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | CATATTTATAAGGTCTGTCTTCCAAGCCTGGCCTCTGATAGGTCAGGACTTTACAAATTTGGTACGACATaGCTCTGGGGTTCTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIYKVCLPSLASDRSGLYKFGTT*LWGSKE Trigger: TTCCTTAGAACCCCAGAGCAATGTCGTACCAAATTT...GTAAAGTCCTGACCTATCAGAGGCCAGGCTTGGAAGACAGACCTTATAAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079024.12 |
||
| CDS-3UTR CAA 90 bp | GAGATCCACAGCATATACCACCATATCTTCTCTCAGCATATACTACCATATCTTTTCTGTGTCCTCATCTaGCTTCTCAGGTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIHSIYHHIFSQHILPYLFCVLI*LLRFSL Trigger: GAGGCTGAACCTGAGAAGCAAGATGAGGACACAGAA...AAGATATGGTAGTATATGCTGAGAGAAGATATGGTGGTATATGCTGTGGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | ATATCCCTGAGAGGCAGACTAGGTATAAACATTATTTTGCTTTATAGGAAGAGATTCCTGTGTTGCCTTTaGGGACATCCTTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRGRLGINIILLYRKRFLCCL*GHPSPW Trigger: CCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGAA...TCTCTTCCTATAAAGCAAAATAATGTTTATACCTAGTCTGCCTCTCAGGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTTCTTGTACCTTCTTGCTTGCTTAGGCAGCATAATTGAGATACCATTTAAATTTGGTACGACATaGCTCTGGGGTTCTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGFLYLLACLGSIIEIPFKFGTT*LWGSKE Trigger: TTCCTTAGAACCCCAGAGCAATGTCGTACCAAATTT...AAATGGTATCTCAATTATGCTGCCTAAGCAAGCAAGAAGGTACAAGAAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
||
| CDS TCA 90 bp | CCTATATTCTTCTCTGGGAATGCTAGTTGTCTTTGTTCCTCTCTTTaGGTCTTTTCCCACTGGCTTTCTGATGAGCATTTATTCTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: PIFFSGNASCLCSSL*VFSHWLSDEHLFLL Trigger: GAGTAAGAATAAATGCTCATCAGAAAGCCAGTGGGAAAAGACTCAAAGAGAGGAACAAAGACAACTAGCATTCCCAGAGAAGAATATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110661.9 ENSMUST00000163766.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGAGCACTTTATTGGCATAACATTTATTAACATGATATCCCTGAGAGGCCGATGGGTAATGAAATaGGAACTGTCACGGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: KTEHFIGITFINMISLRGRWVMK*ELSRKP Trigger: AGGTTTCCGTGACAGTTCCAATTTCATTACCCATCG...GCCTCTCAGGGATATCATGTTAATAAATGTTATGCCAATAAAGTGCTCTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110661.9 |
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| CDS TCA 72 bp | AGCCCCAGTGTACACCTCCAACTCCTACTGCCACACTaGGAGCAGCTCTCAACACTGCAGGATGCACACACT | + |
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Preference number: 6 (lower is better) Translates to: SPSVHLQLLLPH*EQLSTLQDAHT Trigger: AGTGTGTGCATCCTGCAGTGTTGAGAGCTGCTCTCAGTGTGGCAGTAGGAGTTGGAGGTGTACACTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163766.8 |
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| CDS CAA 90 bp | AGTCTCAGGGCTGGCCTTCTTGCCCTCTCTTTCTTGGATACACCCTaGGGCTGGGGTTCCACTGACTCCTGCAGAACACTTAATAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLRAGLLALSFLDTP*GWGSTDSCRTLNNS Trigger: GGAGTTATTAAGTGTTCTGCAGGAGTCAGTGGAACCCCAGCCCAAGGGTGTATCCAAGAAAGAGAGGGCAAGAAGGCCAGCCCTGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS GCA 72 bp | GATTTCAGGGGTGTCATCTTCTCCGAGTGCATTTCCTaGCCCTTCACAGAGACTGTGACCGAATGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DFRGVIFSECIS*PFTETVTECPG Trigger: ACCTGGACATTCGGTCACAGTCTCTGTGAAGGGGCAGGAAATGCACTCGGAGAAGATGACACCCCTGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS CAA 72 bp | CTGGTTCCTGTGTTGCCTTTTGGGACATCCTTCTCCTaGGAGCTAAGCAGATCTGAGATCCATGGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LVPVLPFGTSFS*ELSRSEIHGSP Trigger: AGGAGAGCCATGGATCTCAGATCTGCTTAGCTCCAAGGAGAAGGATGTCCCAAAAGGCAACACAGGAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
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| CDS CCA 72 bp | CCCAGCAGGTTCTCTCTCTCTTGGATGGTAATAGACTaGTTCCTGTGTTGCCTTTTGGGACATCCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSRFSLSWMVID*FLCCLLGHPSP Trigger: AGGAGAAGGATGTCCCAAAAGGCAACACAGGAACCAGTCTATTACCATCCAAGAGAGAGAGAACCTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
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| CDS CCA 72 bp | AGTGACCCTGTTCCACCCAGCAGGTTCTCTCTCTCTTaGATGGTAATAGACTGGTTCCTGTGTTGCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDPVPPSRFSLS*MVIDWFLCCLL Trigger: CAAAAGGCAACACAGGAACCAGTCTATTACCATCCAAGAGAGAGAGAACCTGCTGGGTGGAACAGGGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
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| CDS GCA 72 bp | TTGGATACACCCTTGGGCTGGGGTTCCACTGACTCCTaGAGAACACTTAATAACTCCTGTGATGATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LDTPLGWGSTDS*RTLNNSCDDFR Trigger: CCTGAAATCATCACAGGAGTTATTAAGTGTTCTGCAGGAGTCAGTGGAACCCCAGCCCAAGGGTGTATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS CAA 72 bp | CATAAACCTTCCTTAAGTTATTCTCATCAGGCACACTaGGGCTTCGGAACAGGACAGGTGCAGGTGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: HKPSLSYSHQAH*GFGTGQVQVGC Trigger: ACAACCCACCTGCACCTGTCCTGTTCCGAAGCCCAAGTGTGCCTGATGAGAATAACTTAAGGAAGGTTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163766.8 |
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| CDS TCA 72 bp | TTGGAGCTAAGCAGATCTGAGATCCATGGCTCTCCTTaGTCCAACCTGGACACCACATTGGGTTTAGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LELSRSEIHGSP*SNLDTTLGLGN Trigger: ATTTCCTAAACCCAATGTGGTGTCCAGGTTGGATCAAGGAGAGCCATGGATCTCAGATCTGCTTAGCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000146243.2 ENSMUST00000163766.8 |
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| CDS CCA 72 bp | TCATCTTGCTTCTCAGGTTCAGCCTCACTGGTTCTCTaGAGGCAACAAGAAACTGTTTCTTTCTCCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSCFSGSASLVL*RQQETVSFSWS Trigger: TGACCAGGAGAAAGAAACAGTTTCTTGTTGCCTCCAGAGAACCAGTGAGGCTGAACCTGAGAAGCAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS TCA 72 bp | ACCACATTGGGTTTAGGAAATGGAAATCCGCTCCTTTaGAAAGGTCTGAGATTCTCCTTTGGGTTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: TTLGLGNGNPLL*KGLRFSFGFIC Trigger: GCAGATGAACCCAAAGGAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCCATTTCCTAAACCCAATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS CAA 72 bp | CACCACATTGGGTTTAGGAAATGGAAATCCGCTCCTTaGAAAAGGTCTGAGATTCTCCTTTGGGTTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: HHIGFRKWKSAP*KRSEILLWVHL Trigger: CAGATGAACCCAAAGGAGAATCTCAGACCTTTTCAAAGGAGCGGATTTCCATTTCCTAAACCCAATGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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| CDS GCA 72 bp | GAAATTTTCCTTTCAGACCTTGCAAGTAATGTTCTATaGAGCTGTACTTCCTCAGAAATATCCCGTTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: EIFLSDLASNVL*SCTSSEISRFE Trigger: TTCAAAACGGGATATTTCTGAGGAAGTACAGCTGCATAGAACATTACTTGCAAGGTCTGAAAGGAAAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079024.12 ENSMUST00000110661.9 ENSMUST00000163766.8 |
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