Pregenerated sensors for ZSCAN26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022228Ensembl transcript IDs: ENSMUST00000032820.15, ENSMUST00000110485.3
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACAGCTAGTCTGGCTAGCCAGCTTGCTAGAAAGATCCCATTTTTaGCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACATAC | + |
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Preference number: 1 (lower is better) Translates to: IQLVWLASLLERSHF*HLRGGTTGHRLATY Trigger: GTATGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCTTTCTAGCAAGCTGGCTAGCCAGACTAGCTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CCA 90 bp | GGGACCACAGGCCACAGGCTGGCCACATACTCATTTGACTTTACATaGGTGCTGGGGATCCAAAACAGTCCTTCCACTTGCATAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: GTTGHRLATYSFDFT*VLGIQNSPSTCIAT Trigger: AGTTGCTATGCAAGTGGAAGGACTGTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR GCA 90 bp | TTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTaGTTAGAGTGTATCTTAGGTCAAATCTTAACAAAGGAAGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: FFSVQPVPLCSSPQF*LECILGQILTKEEG Trigger: GCCCTCTTCCTTTGTTAAGATTTGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CCA 90 bp | TCTTTTCACATGTATGATGTTTGCAGGTATGGCTCTACATACGTATaGACACATGTGCACTTAGATTATCATCAGGAGTCTTCCTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFHMYDVCRYGSTYV*THVHLDYHQESSSR Trigger: TCTTGAGGAAGACTCCTGATGATAATCTAAGTGCACATGTGTCCATACGTATGTAGAGCCATACCTGCAAACATCATACATGTGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCTTGCCACCTGAGGGGTaGGACCACAGGCCACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTLPPEG*DHRPQA Trigger: AGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAA...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCCCAGAACTGGAACTGTaGGACGCTGTGCTATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTPELEL*DAVLWR Trigger: CCTCCATAGCACAGCGTCTCACAGTTCCAGTTCTGG...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCAAGAACTCCACCGACTaGTCTCCAAACTCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTKNSTD*SPNSLP Trigger: GGGGAGGGAGTTTGGAGAGCAGTCGGTGGAGTTCTT...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCGTGCCTAGCAGTCCTTaGCCTGTCCCCTCCTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCVPSSP*PVPSLD Trigger: GTCTAAGGAGGGGACAGGCCAAGGACTGCTAGGCAC...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGCCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACATACTCATTACTTGGTTAAACCACTaGGCATATCCCCAACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: FLPPEGWDHRPQAGHILITWLNH*AYPQPS Trigger: TGAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGT...AATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTACAGAAGCCTGAGAAGGCTAGCAGATCCCCAGAACTGGAACTGTGAGACGCCACAGGCCACAGGCTaGCCACATACTCATTTGACT | + |
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Preference number: 2 (lower is better) Translates to: VYRSLRRLADPQNWNCETPQATG*PHTHLT Trigger: AGTCAAATGAGTATGTGGCCAGCCTGTGGCCTGTGG...CGTCTCACAGTTCCAGTTCTGGGGATCTGCTAGCCTTCTCAGGCTTCTGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGGCAGATCCCCAGAACTaGAACTGTGAGACGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: REVLLSSASPFVQLSPILADPQN*NCETLC Trigger: GCACAGCGTCTCACAGTTCCAGTTCTGGGGATCTGC...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATGGCCACATACTCATTTaGCTTTACATGGGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VHQFLWTTVYRSLRRLADGHILI*LYMGAG Trigger: CCCAGCACCCATGTAAAGTCAAATGAGTATGTGGCC...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATACTTGGTTAAACCACTaGGCATATCCCCAACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VHQFLWTTVYRSLRRLADTWLNH*AYPQPS Trigger: TGAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGT...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCTCATTTGACTTTACATaGGTGCTGGGGATCCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTSFDFT*VLGIQN Trigger: GTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGA...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCCAAGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAAAGGTAAAGTGGATATaGAGCCAGTGTTTGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: GPREVLLSSASPFVQLSPKVKWI*SQCLCE Trigger: TTCACACAAACACTGGCTTCATATCCACTTTACCTT...TGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCTTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCAACACTGTGATACTGTaGTTAAAATGGGCAGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTNTVIL*LKWAGN Trigger: ATTTCCTGCCCATTTTAACCACAGTATCACAGTGTT...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGAAGGTAAAGTGGATATaGAGCCAGTGTTTGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: REVLLSSASPFVQLSPILKVKWI*SQCLCE Trigger: TTCACACAAACACTGGCTTCATATCCACTTTACCTT...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACAAGAACTCCACCGACTaGTCTCCAAACTCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QKRNITFTQTVMHKRMFHKNSTD*SPNSLP Trigger: GGGGAGGGAGTTTGGAGAGCAGTCGGTGGAGTTCTT...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCACATGTATGATGTTTaGAGGTATGGCTCTACATAC | + |
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Preference number: 2 (lower is better) Translates to: REVLLSSASPFVQLSPILHMYDV*RYGSTY Trigger: GTATGTAGAGCCATACCTGCAAACATCATACATGTG...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CAA 90 bp | GTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTaGCTTAGAGTGTATCTTAGGTCAAATCTTAACAAAGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VLLSSASPFVQLSPI*LRVYLRSNLNKGRG Trigger: CCCTCTTCCTTTGTTAAGATTTGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGAAATGTAAAATGACATaGGCTAATCCTAAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: REVLLSSASPFVQLSPILKCKMT*ANPKGR Trigger: CCTACCCTTAGGATTAGCTCATGTCATTTTACATTT...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGAACACTGTGATACTGTaGTTAAAATGGGCAGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: REVLLSSASPFVQLSPILNTVIL*LKWAGN Trigger: ATTTCCTGCCCATTTTAACCACAGTATCACAGTGTT...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCACTTGCATAGCAACTTGGTTAAACCACTGAGCATATCCCCAACCCTCAGGCACTTGACTTACTaGTTTCAAACACTTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: SFHLHSNLVKPLSISPTLRHLTY*FQTLHS Trigger: TGAATGAAGTGTTTGAAATCAGTAAGTCAAGTGCCT...GAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGTTGCTATGCAAGTGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTCCAGAACTGGAACTGTaGGACGCTGTGCTATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: STQFTQMTQSLLHSLGKTPELEL*DAVLWR Trigger: CCTCCATAGCACAGCGTCTCACAGTTCCAGTTCTGG...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CAA 90 bp | TCCAAGAATCCTGAAGCCGTCGTGAGTTCTTTCAAAAGGCGCTGTTaGCTTATCAATGTAACATTTCCATGTTTCAAACAGAGAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: SKNPEAVVSSFKRRC*LINVTFPCFKQRTS Trigger: TGAGGTTCTCTGTTTGAAACATGGAAATGTTACATTGATAAGCAAACAGCGCCTTTTGAAAGAACTCACGACGGCTTCAGGATTCTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACGTCTTTTCACATGTATaGTGTTTGCAGGTATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QKRNITFTQTVMHKRMFHVFSHV*CLQVWL Trigger: GAGCCATACCTGCAAACATCATACATGTGAAAAGAC...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACTCATTTGACTTTACATaGGTGCTGGGGATCCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QKRNITFTQTVMHKRMFHSFDFT*VLGIQN Trigger: GTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGA...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACAGGCACTTGACTTACTaGTTTCAAACACTTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: QKRNITFTQTVMHKRMFHRHLTY*FQTLHS Trigger: TGAATGAAGTGTTTGAAATCAGTAAGTCAAGTGCCT...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR GCA 72 bp | GTCTGGCTAGCCAGCTTGCTAGAAAGATCCCATTTTTaGCACCTGAGGGGTGGGACCACAGGCCACAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VWLASLLERSHF*HLRGGTTGHRL Trigger: CAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCTTTCTAGCAAGCTGGCTAGCCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CAA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCAGAAAGATCCCATTTTaGCCACCTGAGGGGTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTRKIPF*PPEGWD Trigger: GTCCCACCCCTCAGGTGGCAAAAATGGGATCTTTCT...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | TGGGACCACAGGCCACAGGCTGGCCACATACTCATTTaGCTTTACATGGGTGCTGGGGATCCAAAACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: WDHRPQAGHILI*LYMGAGDPKQS Trigger: GGACTGTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CCA 72 bp | GGCCACAGGCTGGCCACATACTCATTTGACTTTACATaGGTGCTGGGGATCCAAAACAGTCCTTCCACTTGC | + |
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Preference number: 3 (lower is better) Translates to: GHRLATYSFDFT*VLGIQNSPSTC Trigger: GCAAGTGGAAGGACTGTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGAGTATGTGGCCAGCCTGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | AACTGTGAGACGCTGTGCTATGGAGGTGCTAGGAACTaGAAATGGATGGGTCCTCTGCAAGAGCAGGTATGT | + |
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Preference number: 3 (lower is better) Translates to: NCETLCYGGARN*KWMGPLQEQVC Trigger: ACATACCTGCTCTTGCAGAGGACCCATCCATTTTCAGTTCCTAGCACCTCCATAGCACAGCGTCTCACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCAAAATATTTTACCAGTaGTGTGTGTGTGTCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCKIFYQ*CVCVHQ Trigger: CTGGTGGACACACACACACAACTGGTAAAATATTTT...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | GGAGGCAAATGGCTTCCAAGAATCCTGAAGCCGTCGTaGGTTCTTTCAAAAGGCGCTGTTTGCTTATCAATG | + |
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Preference number: 3 (lower is better) Translates to: GGKWLPRILKPS*VLSKGAVCLSM Trigger: CATTGATAAGCAAACAGCGCCTTTTGAAAGAACTCACGACGGCTTCAGGATTCTTGGAAGCCATTTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | GGTCCATGCCATCAGTTTTTAAGGCCATATGACTGCTaGAGTTGCAACTATCACATGCAAAGTGTGGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GPCHQFLRPYDC*SCNYHMQSVGK Trigger: TTTGCCCACACTTTGCATGTGATAGTTGCAACTTCAGCAGTCATATGGCCTTAAAAACTGATGGCATGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CCA 72 bp | ATGACTGCTGAAGTTGCAACTATCACATGCAAAGTGTaGGCAAAAGGTCCAAGAGAGGTTCTTCTCAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: MTAEVATITCKV*AKGPREVLLSS Trigger: TGAACTGAGAAGAACCTCTCTTGGACCTTTTGCCCACACTTTGCATGTGATAGTTGCAACTTCAGCAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | AACTCTAGCTCCTTAGGATTTGTCTTTTCACATGTATaGTGTTTGCAGGTATGGCTCTACATACGTATGGAC | + |
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Preference number: 3 (lower is better) Translates to: NSSSLGFVFSHV*CLQVWLYIRMD Trigger: GTCCATACGTATGTAGAGCCATACCTGCAAACATCATACATGTGAAAAGACAAATCCTAAGGAGCTAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CCA 72 bp | ATGTATGATGTTTGCAGGTATGGCTCTACATACGTATaGACACATGTGCACTTAGATTATCATCAGGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: MYDVCRYGSTYV*THVHLDYHQES Trigger: AGACTCCTGATGATAATCTAAGTGCACATGTGTCCATACGTATGTAGAGCCATACCTGCAAACATCATACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | AGTCCTTCCACTTGCATAGCAACTTGGTTAAACCACTaGGCATATCCCCAACCCTCATTAATTTTATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SPSTCIATWLNH*AYPQPSLILCF Trigger: AAAACATAAAATTAATGAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGTTGCTATGCAAGTGGAAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR TCA 72 bp | AGTCAATATGACCTGATGGCCATGATCTCTCCGAGCTaGTTTGATTTGCATGGTCAAAATAATATCAAAACA | + |
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Preference number: 3 (lower is better) Translates to: SQYDLMAMISPS*FDLHGQNNIKT Trigger: TGTTTTGATATTATTTTGACCATGCAAATCAAATCAGCTCGGAGAGATCATGGCCATCAGGTCATATTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR TCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCCGACCATGGACTCTCTaGTGGTGGGTGAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTRPWTL*WWVRRR Trigger: CCTCCTCCTCACCCACCATCAGAGAGTCCATGGTCG...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR GCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGGCTCCCGTGCTTCCCTaGGAGGGGCTGGCTCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: REVLLSSASPFVQLSPILAPVLP*EGLARQ Trigger: TTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGC...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR GCA 90 bp | AGATCCCATTTTTGCCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACAGGGAGCCAAAGAGTATaGACGCTTGCTAGGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: RSHFCHLRGGTTGHRLATGSQRV*TLARVD Trigger: ATCCACCCTAGCAAGCGTGCATACTCTTTGGCTCCC...TGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS-3UTR GCA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCAGCTCCCGTGCTTCCCTaGGAGGGGCTGGCTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPFVQLSPILLRVYLRSAPVLP*EGLARQ Trigger: TTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGC...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTTTTGCCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACATTTTCCCACACTCCTTaGATTCTCGGGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHFCHLRGGTTGHRLATFSHTP*ILGAHP Trigger: AGGATGAGCCCCGAGAATGCAAGGAGTGTGGGAAAA...TGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| 3UTR CAA 72 bp | AGTCTGGCTAGCCAGCTTGCTAGAAAGATCCCATTTTaGCCACCTGAGGGGTGGGACCACAGGCCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLASQLARKIPF*PPEGWDHRPQA Trigger: AGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCTTTCTAGCAAGCTGGCTAGCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGCAGTCACTGTACTGGCACTGTTGCTGCCCAGTAAGGAGGTCGCTGCTTGGGCTGAGTCCTTCTaGTCTCCTGCTTTTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LQAVTVLALLLPSKEVAAWAESF*SPAFPR Trigger: CCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCA...AGCAGCGACCTCCTTACTGGGCAGCAACAGTGCCAGTACAGTGACTGCTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCGACCATGGACTCTCTaGTGGTGGGTGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REVLLSSASPFVQLSPILRPWTL*WWVRRR Trigger: CCTCCTCCTCACCCACCATCAGAGAGTCCATGGTCG...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTTTTGCCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACAACAAGAGTCTGTCCCTaGAATGAGATTCCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHFCHLRGGTTGHRLATTRVCP*NEIPIL Trigger: GAGAATGGGAATCTCATTGCAGGGACAGACTCTTGT...TGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAATGGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| 3UTR CAA 72 bp | GTGGGACCACAGGCCACAGGCTGGCCACATACTCATTaGACTTTACATGGGTGCTGGGGATCCAAAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPQATGWPHTH*TLHGCWGSKTV Trigger: GACTGTTTTGGATCCCCAGCACCCATGTAAAGTCAAATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTCTCTCCTCAGGCTTCTaGGGAAGCGCACACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFVQLSPILLRVYLLSSGF*GSAHPG Trigger: GCCTGGGTGTGCGCTTCCTCAGAAGCCTGAGGAGAG...AAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCAGTCTGTCCCTGCAATaGGATTCCCATTCTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTSLSLQ*DSHSHS Trigger: GGAGTGAGAATGGGAATCTCATTGCAGGGACAGACT...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCTTTTCCCACACTCCTTaGATTCTCGGGGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTFSHTP*ILGAHP Trigger: AGGATGAGCCCCGAGAATGCAAGGAGTGTGGGAAAA...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATTCGAGCACCTGGACCTaGAGATCTCTTGGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VHQFLWTTVYRSLRRLADSSTWT*RSLGRM Trigger: CATCCTGCCAAGAGATCTGCAGGTCCAGGTGCTCGA...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGCAGTCACTGTACTGGCACTGTTGCTGCCCAGTAAGGAGGTCGCTGCTGAACTGTTTGCACAATaGCTCCTGCCCAACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQAVTVLALLLPSKEVAAELFAQ*LLPNAF Trigger: AAAGGCGTTGGGCAGGAGCCATTGTGCAAACAGTTC...AGCAGCGACCTCCTTACTGGGCAGCAACAGTGCCAGTACAGTGACTGCTTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCACTTGCATAGCAACTTGGTTAAACCACTGAGCATATCCCCAACCCTCTTCCTCCCCAGTCTCTaGGTGGTGCTCGAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHLHSNLVKPLSISPTLFLPSL*VVLEHL Trigger: CAGGTGCTCGAGCACCACCCAGAGACTGGGGAGGAA...GAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGTTGCTATGCAAGTGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGCAGTCACTGTACTGGCACTGTTGCTGCCCAGTAAGGAGGTCGCTGCTGATGAGAGCTTCGCCTaGAGTTCTTTCCACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQAVTVLALLLPSKEVAADESFA*SSFHNG Trigger: TCCATTGTGGAAAGAACTTCAGGCGAAGCTCTCATC...AGCAGCGACCTCCTTACTGGGCAGCAACAGTGCCAGTACAGTGACTGCTTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGCAGTCACTGTACTGGCACTGTTGCTGCCCAGTAAGGAGGTCGCTGCTTGGTGTCGATTAAGATaGGAGCTTCGCCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQAVTVLALLLPSKEVAAWCRLR*ELRLKF Trigger: GAACTTCAGGCGAAGCTCTCATCTTAATCGACACCA...AGCAGCGACCTCCTTACTGGGCAGCAACAGTGCCAGTACAGTGACTGCTTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACAGAAGCCTGAGAAGGCTAGCAGATCCCCAGAACTGGAACTGTGAGACGTGTCCCCTTGAACTTTaGATCCCTGAAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYRSLRRLADPQNWNCETCPLEL*IPEAPP Trigger: AGGAGGAGCTTCAGGGATTCAAAGTTCAAGGGGACA...CGTCTCACAGTTCCAGTTCTGGGGATCTGCTAGCCTTCTCAGGCTTCTGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACATACTCATTGTATGGATCCTGAGATaGTCCAAAAGACCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPPEGWDHRPQAGHILIVWILR*SKRPAF Trigger: GAATGCAGGTCTTTTGGAGCATCTCAGGATCCATAC...AATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTGGCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTGCACAATGGCTCCTaGCCAACGCCTTTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCLHNGS*PTPFLS Trigger: GGACAGAAAAGGCGTTGGGCAGGAGCCATTGTGCAA...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCAGTCTGTCCCTGCAATaGGATTCCCATTCTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCSLSLQ*DSHSHS Trigger: GGAGTGAGAATGGGAATCTCATTGCAGGGACAGACT...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATGACCAGACTTCTGCCTaGAGGCTTCATTGCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHQFLWTTVYRSLRRLADDQTSA*RLHCIH Trigger: GTGAATGCAATGAAGCCTTCAGGCAGAAGTCTGGTC...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCCTGTCCCCTCCTTAGACATGACTGGCAGCAAGCTGACTAGGTTTACCGTATGGATCCTGAGATaGTCCAAAAGACCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PWPVPSLDMTGSKLTRFTVWILR*SKRPAF Trigger: GAATGCAGGTCTTTTGGAGCATCTCAGGATCCATAC...GGTAAACCTAGTCAGCTTGCTGCCAGTCATGTCTAAGGAGGGGACAGGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCACTCAGGTCCTCACACTaGGCCTCAATGGGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPFVQLSPILLRVYLRSLRSSH*ASMGSV Trigger: GACTGAACCCATTGAGGCCCAGTGTGAGGACCTGAG...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCGATGAGAGCTTCGCCTaGAGTTCTTTCCACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCDESFA*SSFHNG Trigger: TCCATTGTGGAAAGAACTTCAGGCGAAGCTCTCATC...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATTGGTGTCGATTAAGATaGGAGCTTCGCCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHQFLWTTVYRSLRRLADWCRLR*ELRLKF Trigger: GAACTTCAGGCGAAGCTCTCATCTTAATCGACACCA...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCACTTGCATAGCAACTTGGTTAAACCACTGAGCATATCCCCAACCCTCGCAGCAACAGAACTCTaGGATCCTACAGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHLHSNLVKPLSISPTLAATEL*DPTDSQ Trigger: CTGGGAATCTGTAGGATCTCAGAGTTCTGTTGCTGC...GAGGGTTGGGGATATGCTCAGTGGTTTAACCAAGTTGCTATGCAAGTGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| 3UTR CAA 72 bp | GTCCAAGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTaGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VQERFFSVQPVP*CSSPQFCLECI Trigger: GATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTGCAGCAACAGAACTCTaGGATCCTACAGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFVQLSPILLRVYLAATEL*DPTDSQ Trigger: CTGGGAATCTGTAGGATCTCAGAGTTCTGTTGCTGC...AAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTCTTTAGAGATTTCCTaGTGGTCAGCAGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCSLEIS*WSAATE Trigger: TTCTGTTGCTGCTGACCATCAGGAAATCTCTAAAGA...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCACTCTTGGCAGGGATaGCCTTTGTCTTTAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: REVLLSSASPFVQLSPILHSWQG*PLSLEI Trigger: AATCTCTAAAGACAAAGGTCATCCCTGCCAAGAGTG...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTCTCTCCTCAGGCTTCTaGGGAAGCGCACACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTLSSGF*GSAHPG Trigger: GCCTGGGTGTGCGCTTCCTCAGAAGCCTGAGGAGAG...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCACACTCTTGGCAGGGATaGCCTTTGTCTTTAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ASPFVQLSPILLRVYLRSHSWQG*PLSLEI Trigger: AATCTCTAAAGACAAAGGTCATCCCTGCCAAGAGTG...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATAGGCGGAAAGCTTTCTaGCACACATTACATTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHQFLWTTVYRSLRRLADRRKAF*HTLHLK Trigger: TTTCAAATGTAATGTGTGTCAGAAAGCTTTCCGCCT...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTATCAGGCCTGAGTTCTaGACAAGTCTCTCCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFVQLSPILLRVYLIRPEF*TSLSLV Trigger: AACTAAGGAGAGACTTGTTCAGAACTCAGGCCTGAT...AAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTGGATTCTAACATGCTaGTCTAAGTGTGAATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCWILTC*SKCEFR Trigger: CCTAAATTCACACTTAGATCAGCATGTTAGAATCCA...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGTGGATTCTAACATGCTaGTCTAAGTGTGAATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: REVLLSSASPFVQLSPILWILTC*SKCEFR Trigger: CCTAAATTCACACTTAGATCAGCATGTTAGAATCCA...CAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCACAATGGGTTCAGTCATaGTACAAGATGATTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPFVQLSPILLRVYLRSQWVQS*YKMIPF Trigger: GAATGGAATCATCTTGTACCATGACTGAACCCATTG...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCAAAAAGACCTGCATTCTaGCTAAAGACTTTTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPFVQLSPILLRVYLRSKRPAF*LKTFPH Trigger: GTGTGGAAAAGTCTTTAGCCAGAATGCAGGTCTTTT...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACGACCAGACTTCTGCCTaGAGGCTTCATTGCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKRNITFTQTVMHKRMFHDQTSA*RLHCIH Trigger: GTGAATGCAATGAAGCCTTCAGGCAGAAGTCTGGTC...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTCCTCTCGAGGTCCAGTaGTTTCCTCATAGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTPLEVQ*FPHSAA Trigger: AGCTGCGCTATGAGGAAAGCACTGGACCTCGAGAGG...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| CDS-3UTR CCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTCTCAGGTCCTCACACTaGGCCTCAATGGGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTLRSSH*ASMGSV Trigger: GACTGAACCCATTGAGGCCCAGTGTGAGGACCTGAG...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTCATAGCGCAGCTGCCTaGACTGTTTGCACAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTHSAAA*TVCTMA Trigger: AGCCATTGTGCAAACAGTTCAGGCAGCTGCGCTATG...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
||
| 3UTR CAA 72 bp | CCTGAAGCCGTCGTGAGTTCTTTCAAAAGGCGCTGTTaGCTTATCAATGTAACATTTCCATGTTTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEAVVSSFKRRC*LINVTFPCFKQ Trigger: CTGTTTGAAACATGGAAATGTTACATTGATAAGCAAACAGCGCCTTTTGAAAGAACTCACGACGGCTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTGAGAAGCTCTGTAGTGAATATTTGTTTAACTCTGATTCTGCTATTCACAAGAGTCTGTCCCTaGAATGAGATTCCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KALRSSVVNICLTLILLFTRVCP*NEIPIL Trigger: GAGAATGGGAATCTCATTGCAGGGACAGACTCTTGT...GAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAGGAACATCACTTTCACACAAACAGTGATGCATAAAAGGATGTTCCACATGCTCCAAAAGACCTaGATTCTGGCTAAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKRNITFTQTVMHKRMFHMLQKT*ILAKDF Trigger: AAAGTCTTTAGCCAGAATGCAGGTCTTTTGGAGCAT...GTGGAACATCCTTTTATGCATCACTGTTTGTGTGAAAGTGATGTTCCTTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCTGAGAAGCTCTGTAGTGAATATTTGTTTAACTCTGATTCTGCTATTCATGTCTGATGAGGTGTaGACTTCTCTGAAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KALRSSVVNICLTLILLFMSDEV*TSLKDF Trigger: AAAGTCTTTCAGAGAAGTTCACACCTCATCAGACAT...GAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR TCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTATGTCTGATGAGGTGTaGACTTCTCTGAAAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTMSDEV*TSLKDF Trigger: AAAGTCTTTCAGAGAAGTTCACACCTCATCAGACAT...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR TCA 90 bp | TCAACACAGTTCACTCAAATGACTCAAAGTCTCTTGCATAGTTTAGGTAAAACTAGGCGGAAAGCTTTCTaGCACACATTACATTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: STQFTQMTQSLLHSLGKTRRKAF*HTLHLK Trigger: TTTCAAATGTAATGTGTGTCAGAAAGCTTTCCGCCT...AGTTTTACCTAAACTATGCAAGAGACTTTGAGTCATTTGAGTGAACTGTGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR CCA 90 bp | AAAGCTCTGAGAAGCTCTGTAGTGAATATTTGTTTAACTCTGATTCTGCTATTCCAATGGGTTCAGTCATaGTACAAGATGATTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KALRSSVVNICLTLILLFQWVQS*YKMIPF Trigger: GAATGGAATCATCTTGTACCATGACTGAACCCATTG...GAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| 3UTR CAA 72 bp | CACACTGAAAGCTCTGAGAAGCTCTGTAGTGAATATTaGTTTAACTCTGATTCTGCTATTCTGGTAAATTAT | + |
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Preference number: 4 (lower is better) Translates to: HTESSEKLCSEY*FNSDSAILVNY Trigger: ATAATTTACCAGAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTTCAGTGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS GCA 90 bp | TCTCTCCTCAGGCTTCTGAGGAAGCGCACACCCAGGCTGCTCCCGTaGTTCCCTGCGAGGGGCTGGCTCGCCAACCAGCACCGTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLLRLLRKRTPRLLP*FPARGWLANQHRWS Trigger: AGACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGCAGCCTGGGTGTGCGCTTCCTCAGAAGCCTGAGGAGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 90 bp | AGGGGCTGGCTCGCCAACCAGCACCGTTGGTCTGCTTCTTTGGGCTaGGTCCTTCTGCTCTCCTGCTTTTCCACGGTCCAGCTGCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RGWLANQHRWSASLG*VLLLSCFSTVQLQI Trigger: GATTTGCAGCTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 90 bp | CAGCTGCAAATCTTCCAGTATTCCCACCAGTTCCTCCCCAGTCTCTaGGTGGTGCTCGAGCACCTGGACCTGCAGATCTCTTGGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLQIFQYSHQFLPSL*VVLEHLDLQISWQD Trigger: ATCCTGCCAAGAGATCTGCAGGTCCAGGTGCTCGAGCACCACCCAGAGACTGGGGAGGAACTGGTGGGAATACTGGAAGATTTGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 90 bp | CTTTGGGCTGAGTCCTTCTGCTCTCCTGCTTTTCCACGGTCCAGCTaGAAATCTTCCAGTATTCCCACCAGTTCCTCCCCAGTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LWAESFCSPAFPRSS*KSSSIPTSSSPVSG Trigger: CCCAGAGACTGGGGAGGAACTGGTGGGAATACTGGAAGATTTGCAGCTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS TCA 90 bp | GTAAAACCTCTCGAGGTCCAGTGCTTTCCTCATAGCGCAGCTGCCTaGACTGTTTGCACAATGGCTCCTGCCCAACGCCTTTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VKPLEVQCFPHSAAA*TVCTMAPAQRLFCP Trigger: GGGACAGAAAAGGCGTTGGGCAGGAGCCATTGTGCAAACAGTTCAGGCAGCTGCGCTATGAGGAAAGCACTGGACCTCGAGAGGTTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | GTGTACAGAAGCCTGAGAAGGCTAGCAGATCCCCAGAACTGGAACTGTGAGACGGTTTTCCCACACTCCTaGCATTCTCGGGGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VYRSLRRLADPQNWNCETVFPHS*HSRGSS Trigger: GGATGAGCCCCGAGAATGCAAGGAGTGTGGGAAAAC...CGTCTCACAGTTCCAGTTCTGGGGATCTGCTAGCCTTCTCAGGCTTCTGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS GCA 90 bp | TCGCCAACCAGCACCGTTGGTCTGCTTCTTTGGGCTGAGTCCTTCTaGTCTCCTGCTTTTCCACGGTCCAGCTGCAAATCTTCCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SPTSTVGLLLWAESF*SPAFPRSSCKSSSI Trigger: AATACTGGAAGATTTGCAGCTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | CACCTGAGGGGTGGGACCACAGGCCACAGGCTGGCCACATACTCATTTGACTTTGCCTTTTCTGTCCCCTaGAACTTTGAATCCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLRGGTTGHRLATYSFDFAFSVP*NFESLK Trigger: CTTCAGGGATTCAAAGTTCAAGGGGACAGAAAAGGC...AAAGTCAAATGAGTATGTGGCCAGCCTGTGGCCTGTGGTCCCACCCCTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 90 bp | TCCAGTGCTTTCCTCATAGCGCAGCTGCCTGAACTGTTTGCACAATaGCTCCTGCCCAACGCCTTTTCTGTCCCCTTGAACTTTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAFLIAQLPELFAQ*LLPNAFSVPLNFES Trigger: GGATTCAAAGTTCAAGGGGACAGAAAAGGCGTTGGGCAGGAGCCATTGTGCAAACAGTTCAGGCAGCTGCGCTATGAGGAAAGCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | GTCCACCAGTTTCTGTGGACCACTGTGTACAGAAGCCTGAGAAGGCTAGCAGATGACTTTCCCACACTCTaGGCAGGGATGACCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VHQFLWTTVYRSLRRLADDFPTL*AGMTFV Trigger: GACAAAGGTCATCCCTGCCAAGAGTGTGGGAAAGTC...ATCTGCTAGCCTTCTCAGGCTTCTGTACACAGTGGTCCACAGAAACTGGTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | GCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCTTAGAGTGTATCTTAGGTCAAGCTGCCTGAACTGTTaGCACAATGGCTCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPFVQLSPILLRVYLRSSCLNC*HNGSCP Trigger: TGGGCAGGAGCCATTGTGCAAACAGTTCAGGCAGCT...TGACCTAAGATACACTCTAAGCAAAATTGGGGAGAGCTGCACAAAGGGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 90 bp | TTTTCAAGCTCAGGTCCTCACACTGGGCCTCAATGGGTTCAGTCATaGTACAAGATGATTCCATTCTTCCACAAGAGTCTGTCCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSGPHTGPQWVQS*YKMIPFFHKSLSLQ Trigger: TTGCAGGGACAGACTCTTGTGGAAGAATGGAATCATCTTGTACCATGACTGAACCCATTGAGGCCCAGTGTGAGGACCTGAGCTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 90 bp | CCAGGACATTTCTCCTGTATGTGCCCTGTCATGTTCAATCAGGCCTaGGTTCTGAACAAGTCTCTCCTTAGTTTCCAAGCATTGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGHFSCMCPVMFNQA*VLNKSLLSFQALAV Trigger: AACAGCCAATGCTTGGAAACTAAGGAGAGACTTGTTCAGAACTCAGGCCTGATTGAACATGACAGGGCACATACAGGAGAAATGTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 90 bp | TGGTACAAGATGATTCCATTCTTCCACAAGAGTCTGTCCCTGCAATaGGATTCCCATTCTCACTCCTTGTCTCTTTACCTCTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WYKMIPFFHKSLSLQ*DSHSHSLSLYLSPQ Trigger: CTGAGGAGAGAGGTAAAGAGACAAGGAGTGAGAATGGGAATCTCATTGCAGGGACAGACTCTTGTGGAAGAATGGAATCATCTTGTACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | GAGAGGTTCTTCTCAGTTCAGCCAGTCCCTTTGTGCAGCTCTCCCCAATTTTGCCTGACTGTGAATTTTTaGGTGTCGATTAAGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERFFSVQPVPLCSSPQFCLTVNF*VSIKMR Trigger: TCTCATCTTAATCGACACCAAAAAATTCACAGTCAG...GCAAAATTGGGGAGAGCTGCACAAAGGGACTGGCTGAACTGAGAAGAACCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 90 bp | ATTTCTCCTGTATGTGCCCTGTCATGTTCAATCAGGCCTGAGTTCTaGACAAGTCTCTCCTTAGTTTCCAAGCATTGGCTGTTAGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISPVCALSCSIRPEF*TSLSLVSKHWLLVF Trigger: AAAAACTAACAGCCAATGCTTGGAAACTAAGGAGAGACTTGTTCAGAACTCAGGCCTGATTGAACATGACAGGGCACATACAGGAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | AAAGCTCTGAGAAGCTCTGTAGTGAATATTTGTTTAACTCTGATTCTGCTATTCGACTTTCCCACACTCTaGGCAGGGATGACCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KALRSSVVNICLTLILLFDFPTL*AGMTFV Trigger: GACAAAGGTCATCCCTGCCAAGAGTGTGGGAAAGTC...GAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS-3UTR CAA 90 bp | AAAGCTCTGAGAAGCTCTGTAGTGAATATTTGTTTAACTCTGATTCTGCTATTCCTGACTGTGAATTTTTaGGTGTCGATTAAGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KALRSSVVNICLTLILLFLTVNF*VSIKMR Trigger: TCTCATCTTAATCGACACCAAAAAATTCACAGTCAG...GAATAGCAGAATCAGAGTTAAACAAATATTCACTACAGAGCTTCTCAGAGCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS GCA 72 bp | GAGGAAGCGCACACCCAGGCTGCTCCCGTGCTTCCCTaGGAGGGGCTGGCTCGCCAACCAGCACCGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EEAHTQAAPVLP*EGLARQPAPLV Trigger: GACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGCAGCCTGGGTGTGCGCTTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS CCA 72 bp | ACACCCAGGCTGCTCCCGTGCTTCCCTGCGAGGGGCTaGCTCGCCAACCAGCACCGTTGGTCTGCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TPRLLPCFPARG*LANQHRWSASL Trigger: CAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGCAGCCTGGGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS CAA 90 bp | GCTCCCGTGCTTCCCTGCGAGGGGCTGGCTCGCCAACCAGCACCGTaGGTCTGCTTCTTTGGGCTGAGTCCTTCTGCTCTCCTGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: APVLPCEGLARQPAP*VCFFGLSPSALLLF Trigger: GAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCAGGGAAGCACGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CAA 72 bp | CTTCCCTGCGAGGGGCTGGCTCGCCAACCAGCACCGTaGGTCTGCTTCTTTGGGCTGAGTCCTTCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPCEGLARQPAP*VCFFGLSPSAL Trigger: GAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCAGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 72 bp | TGCGAGGGGCTGGCTCGCCAACCAGCACCGTTGGTCTaGTTCTTTGGGCTGAGTCCTTCTGCTCTCCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CEGLARQPAPLV*FFGLSPSALLL Trigger: AAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGCCCCTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 72 bp | AGTATTCCCACCAGTTCCTCCCCAGTCTCTGGGTGGTaGTCGAGCACCTGGACCTGCAGATCTCTTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SIPTSSSPVSGW*SSTWTCRSLGR Trigger: CCTGCCAAGAGATCTGCAGGTCCAGGTGCTCGAGCACCACCCAGAGACTGGGGAGGAACTGGTGGGAATACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 72 bp | TCCAGTATTCCCACCAGTTCCTCCCCAGTCTCTGGGTaGTGCTCGAGCACCTGGACCTGCAGATCTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSIPTSSSPVSG*CSSTWTCRSLG Trigger: GCCAAGAGATCTGCAGGTCCAGGTGCTCGAGCACCACCCAGAGACTGGGGAGGAACTGGTGGGAATACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 72 bp | GCTGGCTCGCCAACCAGCACCGTTGGTCTGCTTCTTTaGGCTGAGTCCTTCTGCTCTCCTGCTTTTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSPTSTVGLLL*AESFCSPAFPR Trigger: CCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS TCA 72 bp | CTCGCCAACCAGCACCGTTGGTCTGCTTCTTTGGGCTaGGTCCTTCTGCTCTCCTGCTTTTCCACGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LANQHRWSASLG*VLLLSCFSTVQ Trigger: CTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCTGGTTGGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS TCA 72 bp | CTCGAGGTCCAGTGCTTTCCTCATAGCGCAGCTGCCTaGACTGTTTGCACAATGGCTCCTGCCCAACGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LEVQCFPHSAAA*TVCTMAPAQRL Trigger: AAGGCGTTGGGCAGGAGCCATTGTGCAAACAGTTCAGGCAGCTGCGCTATGAGGAAAGCACTGGACCTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 72 bp | ATCTTCCAGTATTCCCACCAGTTCCTCCCCAGTCTCTaGGTGGTGCTCGAGCACCTGGACCTGCAGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IFQYSHQFLPSL*VVLEHLDLQIS Trigger: AGAGATCTGCAGGTCCAGGTGCTCGAGCACCACCCAGAGACTGGGGAGGAACTGGTGGGAATACTGGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 72 bp | AAGCTCCTCCTTCAGATTCAGGGGAGCCAAAGAGTATaGACGCTTGCTAGGGTGGATCAAGGCCAGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KLLLQIQGSQRV*TLARVDQGQCH Trigger: ATGGCACTGGCCTTGATCCACCCTAGCAAGCGTGCATACTCTTTGGCTCCCCTGAATCTGAAGGAGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 72 bp | GAGTCCTTCTGCTCTCCTGCTTTTCCACGGTCCAGCTaGAAATCTTCCAGTATTCCCACCAGTTCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESFCSPAFPRSS*KSSSIPTSSSP Trigger: TGGGGAGGAACTGGTGGGAATACTGGAAGATTTGCAGCTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS GCA 72 bp | AGCACCGTTGGTCTGCTTCTTTGGGCTGAGTCCTTCTaGTCTCCTGCTTTTCCACGGTCCAGCTGCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: STVGLLLWAESF*SPAFPRSSCKS Trigger: AGATTTGCAGCTGGACCGTGGAAAAGCAGGAGAGCAGAAGGACTCAGCCCAAAGAAGCAGACCAACGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CCA 72 bp | TTCCTCATAGCGCAGCTGCCTGAACTGTTTGCACAATaGCTCCTGCCCAACGCCTTTTCTGTCCCCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FLIAQLPELFAQ*LLPNAFSVPLN Trigger: GTTCAAGGGGACAGAAAAGGCGTTGGGCAGGAGCCATTGTGCAAACAGTTCAGGCAGCTGCGCTATGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS CAA 72 bp | GCACAATGGCTCCTGCCCAACGCCTTTTCTGTCCCCTaGAACTTTGAATCCCTGAAGCTCCTCCTTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: AQWLLPNAFSVP*NFESLKLLLQI Trigger: AATCTGAAGGAGGAGCTTCAGGGATTCAAAGTTCAAGGGGACAGAAAAGGCGTTGGGCAGGAGCCATTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110485.3 |
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| CDS TCA 72 bp | ACACTGGGCCTCAATGGGTTCAGTCATGGTACAAGATaGTTCCATTCTTCCACAAGAGTCTGTCCCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLGLNGFSHGTR*FHSSTRVCPCN Trigger: ATTGCAGGGACAGACTCTTGTGGAAGAATGGAATCATCTTGTACCATGACTGAACCCATTGAGGCCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 72 bp | GTATGTGCCCTGTCATGTTCAATCAGGCCTGAGTTCTaGACAAGTCTCTCCTTAGTTTCCAAGCATTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VCALSCSIRPEF*TSLSLVSKHWL Trigger: CAGCCAATGCTTGGAAACTAAGGAGAGACTTGTTCAGAACTCAGGCCTGATTGAACATGACAGGGCACATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 72 bp | TTCTCCTGTATGTGCCCTGTCATGTTCAATCAGGCCTaGGTTCTGAACAAGTCTCTCCTTAGTTTCCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSCMCPVMFNQA*VLNKSLLSFQA Trigger: TGCTTGGAAACTAAGGAGAGACTTGTTCAGAACTCAGGCCTGATTGAACATGACAGGGCACATACAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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| CDS TCA 72 bp | ATGATTCCATTCTTCCACAAGAGTCTGTCCCTGCAATaGGATTCCCATTCTCACTCCTTGTCTCTTTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: MIPFFHKSLSLQ*DSHSHSLSLYL Trigger: GAGGTAAAGAGACAAGGAGTGAGAATGGGAATCTCATTGCAGGGACAGACTCTTGTGGAAGAATGGAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032820.15 ENSMUST00000110485.3 |
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