Pregenerated sensors for ZSCAN25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070420Ensembl transcript IDs: ENSMUST00000094116.5, ENSMUST00000199563.2, ENSMUST00000200246.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTaGCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: ALLLLEHVLLSLTGH*PDHSVQHKSLLWQS Trigger: GCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| 3UTR GCA 90 bp | GGCACTCACAGAGGGAAGCCCTGGACCCACATGAAGAATGGGCAATaGTTGTTCCTGGAAGGCCTGTGTCCCATCTCCAGGGCCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GTHRGKPWTHMKNGQ*LFLEGLCPISRALA Trigger: AGCCAGGGCCCTGGAGATGGGACACAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCTGTGAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 90 bp | ACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATaGCAGAGCTGTTCCCTTAGTAGGCTCACTGCACCGGAGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: TGHCPDHSVQHKSLL*QSCSLSRLTAPEAP Trigger: AGGAGCCTCCGGTGCAGTGAGCCTACTAAGGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 90 bp | AGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCACTCGGTaGAACACAAGTCGCTCCTATGGCAGAGCTGTTCCCTTAGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: STFCCPSLGTAQTTR*NTSRSYGRAVPLVG Trigger: GCCTACTAAGGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| 3UTR CCA 90 bp | CCTGGGACGTGGCTGCAAGGAATCCAGCAGCCATCTCTTGGTCTCTaGCACTCACAGAGGGAAGCCCTGGACCCACATGAAGAATGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PGTWLQGIQQPSLGL*HSQREALDPHEEWA Trigger: TGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGGATTCCTTGCAGCCACGTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 90 bp | TCCAGCAGCCATCTCTTGGTCTCTGGCACTCACAGAGGGAAGCCCTaGACCCACATGAAGAATGGGCAATGCTTGTTCCTGGAAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSSHLLVSGTHRGKP*THMKNGQCLFLEGL Trigger: CAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 90 bp | AAGCCATCGGAAGTCAACCCAACAAATGCTCTCTTCAGGTCTTCCTaGTGGGGCTTAGCCTCCTTCTCCTTGCTCCCAGCACCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: KPSEVNPTNALFRSS*WGLASFSLLPAPGR Trigger: CCTTCCAGGTGCTGGGAGCAAGGAGAAGGAGGCTAAGCCCCAGCAGGAAGACCTGAAGAGAGCATTTGTTGGGTTGACTTCCGATGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 90 bp | ACCCAAAGTCATGTCTTTAAATGGCCCCAGACCCTGGGACGTGGCTaGAAGGAATCCAGCAGCCATCTCTTGGTCTCTGGCACTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: TQSHVFKWPQTLGRG*KESSSHLLVSGTHR Trigger: TCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGGATTCCTTGCAGCCACGTCCCAGGGTCTGGGGCCATTTAAAGACATGACTTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 90 bp | ATGCCTCCATTCCTCCTCAGGAAAACCCAAAGTCATGTCTTTAAATaGCCCCAGACCCTGGGACGTGGCTGCAAGGAATCCAGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: MPPFLLRKTQSHVFK*PQTLGRGCKESSSH Trigger: ATGGCTGCTGGATTCCTTGCAGCCACGTCCCAGGGTCTGGGGCCATTTAAAGACATGACTTTGGGTTTTCCTGAGGAGGAATGGAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CAA 90 bp | ACTCACAGAGGGAAGCCCTGGACCCACATGAAGAATGGGCAATGCTaGTTCCTGGAAGGCCTGTGTCCCATCTCCAGGGCCCTGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: THRGKPWTHMKNGQC*FLEGLCPISRALAQ Trigger: CTGAGCCAGGGCCCTGGAGATGGGACACAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCTGTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCAAAGGATTTTTCTTCTTCATGGGTCCGCTGGTGCCTAACAAGGTTGGAAGGGGTACCCCATGCTaGGGAGCAGGAAGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TAKGFFFFMGPLVPNKVGRGTPC*GAGSPG Trigger: GCCTGGGCTTCCTGCTCCTCAGCATGGGGTACCCCT...TCCAACCTTGTTAGGCACCAGCGGACCCATGAAGAAGAAAAATCCTTTGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAAGCAGTCAATCTGAGCTGGGGCTACATGCCTCCATTCCTCCTCAGGAATCAGCTGTTCTGTGGTaGTTGGGCCTAGGCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LQSSQSELGLHASIPPQESAVLW*LGLGSE Trigger: TTCAGAGCCTAGGCCCAAGCACCACAGAACAGCTGA...TTCCTGAGGAGGAATGGAGGCATGTAGCCCCAGCTCAGATTGACTGCTTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTAGTCAACCCAACAAATaGTCTCTTCAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVSQPNK*SLQVFL Trigger: CAGGAAGACCTGAAGAGAGCATTTGTTGGGTTGACT...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAAAGGATTTTTCTTCTTCATGGGTCCGCTGGTGCCTAACAAGGTTGGAGCTCCTGCTCACAGGTaGCCCCTGGTCCAGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: TAKGFFFFMGPLVPNKVGAPAHR*PLVQES Trigger: AGATTCCTGGACCAGGGGGCACCTGTGAGCAGGAGC...TCCAACCTTGTTAGGCACCAGCGGACCCATGAAGAAGAAAAATCCTTTGGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACACTCAGGGCACTGGAAAGGCTTCCAGAAAGAATTGTGGGTGTTGAGGGTCCATCTCTTGGTCTCTaGCACTCACAGAGGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: STLRALERLPERIVGVEGPSLGL*HSQREA Trigger: GGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGG...ACCCTCAACACCCACAATTCTTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGGAAGTCAACCCAACAAATGCTCTCTTCAGGTCTTCCTGCTGGGGCTTAGCATGAAGAATGGGCAATaGTTGTTCCTGGAAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IGSQPNKCSLQVFLLGLSMKNGQ*LFLEGL Trigger: CAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCAT...GCTAAGCCCCAGCAGGAAGACCTGAAGAGAGCATTTGTTGGGTTGACTTCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTaGTGTCCCTCACTGGGCACTGCCCAGACCACTCGG | + |
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Preference number: 3 (lower is better) Translates to: LQALPSSYLSTF*CPSLGTAQTTR Trigger: CCGAGTGGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | GACTGGTCCCAGAGCTCCCAGGCTCCTGCTCACAGGTaGCCCCTGGTCCAGGAATCTGGATGTCGGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: DWSQSSQAPAHR*PLVQESGCRLL Trigger: GAGAAGCCGACATCCAGATTCCTGGACCAGGGGGCACCTGTGAGCAGGAGCCTGGGAGCTCTGGGACCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | TGCTGTCCCTCACTGGGCACTGCCCAGACCACTCGGTaGAACACAAGTCGCTCCTATGGCAGAGCTGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: CCPSLGTAQTTR*NTSRSYGRAVP Trigger: GGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGACAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | CTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTaGCCAGACCACTCGGTGCAACACAAGTCGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLEHVLLSLTGH*PDHSVQHKSLL Trigger: TAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | AGAGGGAAGCCCTGGACCCACATGAAGAATGGGCAATaGTTGTTCCTGGAAGGCCTGTGTCCCATCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RGKPWTHMKNGQ*LFLEGLCPISR Trigger: CCTGGAGATGGGACACAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | CATGTCTTTAAATGGCCCCAGACCCTGGGACGTGGCTaGAAGGAATCCAGCAGCCATCTCTTGGTCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: HVFKWPQTLGRG*KESSSHLLVSG Trigger: GCCAGAGACCAAGAGATGGCTGCTGGATTCCTTGCAGCCACGTCCCAGGGTCTGGGGCCATTTAAAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 72 bp | TGGCTGCAAGGAATCCAGCAGCCATCTCTTGGTCTCTaGCACTCACAGAGGGAAGCCCTGGACCCACATGAA | + |
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Preference number: 3 (lower is better) Translates to: WLQGIQQPSLGL*HSQREALDPHE Trigger: TTCATGTGGGTCCAGGGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGGATTCCTTGCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 72 bp | CACTCAGGGCACTGGAAAGGCTTCCAGAAAGAATTGTaGGTGTTGAGGGTGTCAGGCAGGGGTACCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: HSGHWKGFQKEL*VLRVSGRGTPC Trigger: GCATGGGGTACCCCTGCCTGACACCCTCAACACCCACAATTCTTTCTGGAAGCCTTTCCAGTGCCCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGCAGAGCTGTTCCCTTAGTAGGCTCACTGCACCGGAGGCTCCTGGCGATGGGCTTCCAGAAAGAATaGTGGGTGTTGAGGGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: YGRAVPLVGSLHRRLLAMGFQKE*WVLRVS Trigger: TGACACCCTCAACACCCACAATTCTTTCTGGAAGCC...CATCGCCAGGAGCCTCCGGTGCAGTGAGCCTACTAAGGGAACAGCTCTGCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR TCA 72 bp | CTTGCTCCCAGCACCTGGAAGGACCCCACAATCCTGTaGGTCCACGTATTCTCCAAAGCAGTCAATCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: LAPSTWKDPTIL*VHVFSKAVNLS Trigger: GCTCAGATTGACTGCTTTGGAGAATACGTGGACTCACAGGATTGTGGGGTCCTTCCAGGTGCTGGGAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR GCA 72 bp | GAAGTCAACCCAACAAATGCTCTCTTCAGGTCTTCCTaGTGGGGCTTAGCCTCCTTCTCCTTGCTCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: EVNPTNALFRSS*WGLASFSLLPA Trigger: TGCTGGGAGCAAGGAGAAGGAGGCTAAGCCCCAGCAGGAAGACCTGAAGAGAGCATTTGTTGGGTTGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 72 bp | CATCTCTTGGTCTCTGGCACTCACAGAGGGAAGCCCTaGACCCACATGAAGAATGGGCAATGCTTGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: HLLVSGTHRGKP*THMKNGQCLFL Trigger: CAGGAACAAGCATTGCCCATTCTTCATGTGGGTCCAGGGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR TCA 72 bp | TCCTGTGAGTCCACGTATTCTCCAAAGCAGTCAATCTaGGCTGGGGCTACATGCCTCCATTCCTCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SCESTYSPKQSI*AGATCLHSSSG Trigger: TCCTGAGGAGGAATGGAGGCATGTAGCCCCAGCTCAGATTGACTGCTTTGGAGAATACGTGGACTCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR CCA 72 bp | AAACCCAAAGTCATGTCTTTAAATGGCCCCAGACCCTaGGACGTGGCTGCAAGGAATCCAGCAGCCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: KPKVMSLNGPRP*DVAARNPAAIS Trigger: AGAGATGGCTGCTGGATTCCTTGCAGCCACGTCCCAGGGTCTGGGGCCATTTAAAGACATGACTTTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCCAAAGGATTTTTCTTCTTCATGGGTCCGCTGGTGCCTAACAAGGTTGGATTAGCCTCCTTCTCCTaGCTCCCAGCACCTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: TAKGFFFFMGPLVPNKVGLASFS*LPAPGR Trigger: CCTTCCAGGTGCTGGGAGCAAGGAGAAGGAGGCTAA...TCCAACCTTGTTAGGCACCAGCGGACCCATGAAGAAGAAAAATCCTTTGGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS-3UTR GCA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCGGCACGCCGGTGCACTaGCAGGTTGGCGTTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ALPSSYLSTFCCPSLGTAGTPVH*QVGVPA Trigger: AGCCGGAACGCCAACCTGGCAGTGCACCGGCGTGCC...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCAGGGGTACCCCATGCTaGGGAGCAGGAAGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGRGTPC*GAGSPG Trigger: GCCTGGGCTTCCTGCTCCTCAGCATGGGGTACCCCT...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | GGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCGGATGGACCTCTGGTTaGAGCTGCGGCCGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSALLLLEHVLLSLTGHCGWTSG*SCGRRL Trigger: CAGCCTGCGGCCGCAGCTTCAACCAGAGGTCCATCC...GCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR GCA 90 bp | CCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACGAGCTCCCAGGCTCCTaGTCACAGGTGCCCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PGSALLLLEHVLLSLTGHELPGS*SQVPPG Trigger: ACCAGGGGGCACCTGTGAGCAGGAGCCTGGGAGCTC...GTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCCTTGGGCCTAGGCTCTaGACTCCTTCCCCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGLGPRL*TPSPWG Trigger: ACCCCAGGGGGAAGGAGTTCAGAGCCTAGGCCCAAG...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR GCA 90 bp | GGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTCCGCCTTGGCCTCCGTaGTCCCCATCAGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHCPDHSVQHKSLLWQSCPPWPP*SPSAPP Trigger: TGGAGGAGCTGATGGGGAGCACGGAGGCCAAGGCGG...ACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGCCATCTCTTGGTCTCTGGCACTCACAGAGGGAAGCCCTGGACCCACCCGCCTTGGCCTCCGTaGTCCCCATCAGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSSHLLVSGTHRGKPWTHPPWPP*SPSAPP Trigger: TGGAGGAGCTGATGGGGAGCACGGAGGCCAAGGCGG...GTGGGTCCAGGGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS-3UTR CCA 90 bp | GCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACACCAGCTGCTCTCCCTaGGCATGGCATGGAACCGCC | + |
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Preference number: 4 (lower is better) Translates to: ALLLLEHVLLSLTGHCPDTSCSP*AWHGTA Trigger: GGCGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGT...GTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGGAAGCCCAGGCAGACTaGTCCCAGAGCTCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPSSYLSTFCCPSLGTAQEAQAD*SQSSQA Trigger: AGCCTGGGAGCTCTGGGACCAGTCTGCCTGGGCTTC...CTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CCA 90 bp | TGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGGGCTTCTCCCCAGTATaGGCACGCCGGTGCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: WALPRPLGATQVAPMAELGFSPV*ARRCTA Trigger: GGCAGTGCACCGGCGTGCCCATACTGGGGAGAAGCC...CAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCGCACCCATCTGCTGCTaGGGATCTCCTGCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALPSSYLSTFCCPSLGTAAPICC*GSPAIS Trigger: GGAGATGGCAGGAGATCCTCAGCAGCAGATGGGTGC...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCGCACCCATCTGCTGCTaGGGATCTCCTGCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSYLSTFCCPSLGTAQTAPICC*GSPAIS Trigger: GGAGATGGCAGGAGATCCTCAGCAGCAGATGGGTGC...GGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| CDS-3UTR TCA 90 bp | GCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACGGTGATGCCTCTGGCTaGAGGTCTTCCAGCACTCGC | + |
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Preference number: 4 (lower is better) Translates to: ALLLLEHVLLSLTGHCPDGDASG*RSSSTR Trigger: GCGAGTGCTGGAAGACCTTCAGCCAGAGGCATCACC...GTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | GTCCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGATGCTGCCTCCGGCTaGAGCCCTTCCAGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VPHWALPRPLGATQVAPMDAASG*SPSSSL Trigger: CAGACTGCTGGAAGGGCTTCAGCCGGAGGCAGCATC...CATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCGGTTGGCGTTCCGGCTaGAACTCTTGCCACACTCGC | + |
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Preference number: 4 (lower is better) Translates to: PSSYLSTFCCPSLGTAQTGWRSG*NSCHTR Trigger: GCGAGTGTGGCAAGAGTTTCAGCCGGAACGCCAACC...GGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCGTGTGCGTCCTGCGATaGACCAGCAGATGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGVCVLR*TSRCCL Trigger: GAGGCAGCATCTGCTGGTGCATCGCAGGACGCACAC...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCCCCCTGTGTGCGTCCTaGGATGCACCAGCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGPLCAS*DAPADA Trigger: AGCATCTGCTGGTGCATCGCAGGACGCACACAGGGG...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR GCA 90 bp | CACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGGTATGGGCACGCCGGTaGACTGCCAGGTTGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HWALPRPLGATQVAPMAEVWARR*TARLAF Trigger: GAACGCCAACCTGGCAGTGCACCGGCGTGCCCATAC...CTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | TGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGCGGCGACAGAGCTCTTaGAGCTCCCTGAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WALPRPLGATQVAPMAELRRQSS*SSLRAS Trigger: GGAAGCCCTCAGGGAGCTCCAAGAGCTCTGTCGCCG...CAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGCCTTGCCGCTGTCTaGGCTGTGTTCCCGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLGTAQTTRCNTSRSYGSLAAV*AVFPDP Trigger: TGGATCCGGGAACACAGCCCAGACAGCGGCAAGGCT...GCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTGCTCTCCCTGGGCATaGCATGGAACCGCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WALPRPLGATQVAPMAELCSPWA*HGTALA Trigger: GGCCAAGGCGGTTCCATGCCATGCCCAGGGAGAGCA...CAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | CCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCATGGAACCCACCGCCTTaGCCTCCGTGCTCCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHWALPRPLGATQVAPMAWNPPP*PPCSPS Trigger: TGATGGGGAGCACGGAGGCCAAGGCGGTGGGTTCCA...TGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCTCCTGCTCACAGGTaGCCCCTGGTCCAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHWALPRPLGATQVAPMAPAHR*PLVQES Trigger: AGATTCCTGGACCAGGGGGCACCTGTGAGCAGGAGC...CATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTCGGCGACAGAGCTCTTaGAGCTCCCTGAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVRRQSS*SSLRAS Trigger: GGAAGCCCTCAGGGAGCTCCAAGAGCTCTGTCGCCG...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCTTGCTCCCAGCACCTaGAAGGACCCCACAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPSSYLSTFCCPSLGTALAPST*KDPTIL Trigger: CAGGATTGTGGGGTCCTTCCAGGTGCTGGGAGCAAG...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCGCTCCTTCTCCAGTTTaGCCACTGGAGCACCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGAPSPV*PLEHPS Trigger: AGATGGGTGCTCCAGTGGTCAAACTGGAGAAGGAGC...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCCCAAAGCAGTCAATCTaGGCTGGGGCTACATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQALPSSYLSTFCCPSLGPKQSI*AGATCL Trigger: GAGGCATGTAGCCCCAGCTCAGATTGACTGCTTTGG...GCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCTCTTCAGGTCTTCCTaGTGGGGCTTAGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPSSYLSTFCCPSLGTALFRSS*WGLASF Trigger: GAAGGAGGCTAAGCCCCAGCAGGAAGACCTGAAGAG...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACACACATAGGGCCTCTTaGCCAGGTGGGTCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSALLLLEHVLLSLTGHTHRAS*PGGSSD Trigger: ATCAGAGGACCCACCTGGGCAAGAGGCCCTATGTGT...GTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTAGCCTTGCCGCTGTCTaGGCTGTGTTCCCGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVSLAAV*AVFPDP Trigger: TGGATCCGGGAACACAGCCCAGACAGCGGCAAGGCT...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGGCTCAGCTGTTCTGTaGTGCTTGGGCCTAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHWALPRPLGATQVAPMAGSAVL*CLGLGS Trigger: AGAGCCTAGGCCCAAGCACCACAGAACAGCTGAGCC...TGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTCCATCTCCAGGGCCCTaGCTCAGCTGTTCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVPSPGP*LSCSVV Trigger: CACCACAGAACAGCTGAGCCAGGGCCCTGGAGATGG...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCCCAGCAGCCATCTCTTaGTCTCTGGCACTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSYLSTFCCPSLGTAQTPAAIS*SLALTE Trigger: CTCTGTGAGTGCCAGAGACCAAGAGATGGCTGCTGG...GGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGAATGGCCCCAGACCCTaGGACGTGGCTGCAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPHWALPRPLGATQVAPMNGPRP*DVAARN Trigger: ATTCCTTGCAGCCACGTCCCAGGGTCTGGGGCCATT...CATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | TATGGCAGAGCTGTTCCCTTAGTAGGCTCACTGCACCGGAGGCTCCTGGCGATGTGCTCTCCCTGGGCATaGCATGGAACCCACCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YGRAVPLVGSLHRRLLAMCSPWA*HGTHRL Trigger: AAGGCGGTGGGTTCCATGCCATGCCCAGGGAGAGCA...CATCGCCAGGAGCCTCCGGTGCAGTGAGCCTACTAAGGGAACAGCTCTGCCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGTCAGCTGTTCTGTGGTaGTTGGGCCTAGGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYLSTFCCPSLGTAQSAVLW*LGLGSE Trigger: TTCAGAGCCTAGGCCCAAGCACCACAGAACAGCTGA...CTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCGGCAATGCTTGTTCCTaGAAGGCCTGTGTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSALLLLEHVLLSLTGHCGNACS*KACVPS Trigger: AGATGGGACACAGGCCTTCCAGGAACAAGCATTGCC...GCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGCCATCTCTTGGTCTCTaGCACTCACAGAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPHWALPRPLGATQVAPMPSLGL*HSQREA Trigger: GGCTTCCCTCTGTGAGTGCCAGAGACCAAGAGATGG...CATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGGCAGTCAATCTGAGCTaGGGCTACATGCCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSYLSTFCCPSLGTAQAVNLS*GYMPPF Trigger: GAATGGAGGCATGTAGCCCCAGCTCAGATTGACTGC...CTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR TCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTGCTCCTTCTCCAGTTTaGCCACTGGAGCACCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVAPSPV*PLEHPS Trigger: AGATGGGTGCTCCAGTGGTCAAACTGGAGAAGGAGC...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTCCCTTTCAGGTCTTCCTGCTaGGGCTTAGCCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLGATQVAPMAELFPFRSSC*GLASFS Trigger: GGAGAAGGAGGCTAAGCCCCAGCAGGAAGACCTGAA...AGGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTCCCTGGTATTCCCTCAGGGTaGAACCTTTCCCACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLGATQVAPMAELFPGIPSG*NLSHTP Trigger: TGGAGTGTGGGAAAGGTTTCACCCTGAGGGAATACC...AGGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACTTCCAGAAAGAATTGTaGGTGTTGAGGGTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLLEHVLLSLTGHCPDFQKEL*VLRVSG Trigger: GCCTGACACCCTCAACACCCACAATTCTTTCTGGAA...GTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | GGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTCCACACTCAGGGCACTaGAAAGGCTTCCAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHCPDHSVQHKSLLWQSCPHSGH*KGFQKE Trigger: TTCTTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGG...ACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| 3UTR CAA 72 bp | CCACACTCAGGGCACTGGAAAGGCTTCCAGAAAGAATaGTGGGTGTTGAGGGTGTCAGGCAGGGGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHSGHWKGFQKE*WVLRVSGRGTP Trigger: TGGGGTACCCCTGCCTGACACCCTCAACACCCACAATTCTTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGATGAAGAATGGGCAATaGTTGTTCCTGGAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HWALPRPLGATQVAPMAEMKNGQ*LFLEGL Trigger: CAGGCCTTCCAGGAACAAGCATTGCCCATTCTTCAT...CTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCAGTCAACCCAACAAATaGTCTCTTCAGGTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPSSYLSTFCCPSLGTASQPNK*SLQVFL Trigger: CAGGAAGACCTGAAGAGAGCATTTGTTGGGTTGACT...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CCA 90 bp | CACCTGGAAGGACCCCACAATCCTGTGAGTCCACGTATTCTCCAAAGCAGTCAAACCAGCTGCTCTCCCTaGGCATGGCATGGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLEGPHNPVSPRILQSSQTSCSP*AWHGTH Trigger: GTGGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGT...TTGACTGCTTTGGAGAATACGTGGACTCACAGGATTGTGGGGTCCTTCCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTGATTTTTCTTCTTCATaGGTCCGCTGGTGCCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVDFSSS*VRWCLT Trigger: TGTTAGGCACCAGCGGACCCATGAAGAAGAAAAATC...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS CCA 90 bp | CACGATGCTCCGCCAAGGGCTGTGACCAGCTGCTCTCCCTGGGCATaGCATGGAACCGCCTTGGCCTCCGTGCTCCCCATCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HDAPPRAVTSCSPWA*HGTALASVLPISSS Trigger: GGAGGAGCTGATGGGGAGCACGGAGGCCAAGGCGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
||
| CDS CCA 90 bp | GATTGCCACGATGCTCCGCCAAGGGCTGTGACCAGCTGCTCTCCCTaGGCATGGCATGGAACCGCCTTGGCCTCCGTGCTCCCCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DCHDAPPRAVTSCSP*AWHGTALASVLPIS Trigger: GCTGATGGGGAGCACGGAGGCCAAGGCGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
||
| CDS CCA 90 bp | TGTGACCAGCTGCTCTCCCTGGGCATGGCATGGAACCCACCGCCTTaGCCTCCGTGCTCCCCATCAGCTCCTCCACCATGGCCACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CDQLLSLGMAWNPPP*PPCSPSAPPPWPPE Trigger: CTCTGGTGGCCATGGTGGAGGAGCTGATGGGGAGCACGGAGGCCAAGGCGGTGGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS GCA 90 bp | TGGATGCCTGATTGCCACGATGCTCCGCCAAGGGCTGTGACCAGCTaGTCTCCCTGGGCATGGCATGGAACCGCCTTGGCCTCCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WMPDCHDAPPRAVTS*SPWAWHGTALASVL Trigger: GAGCACGGAGGCCAAGGCGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATCAGGCATCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACCCGGCGACAGAGCTCTaGGAGCTCCCTGAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGSALLLLEHVLLSLTGHPATEL*ELPEGF Trigger: GAAGCCCTCAGGGAGCTCCAAGAGCTCTGTCGCCGG...GTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACACCAGTCGCTCCCCCTaGCTGAAGCGCTTGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLLEHVLLSLTGHCPDTSRSP*LKRLPH Trigger: GTGCGGCAAGCGCTTCAGCAAGGGGGAGCGACTGGT...GTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCATGGAACCCACCGCCTaGGCCTCCGTGCTCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSSYLSTFCCPSLGTAQTMEPTA*ASVLPI Trigger: GATGGGGAGCACGGAGGCCAAGGCGGTGGGTTCCAT...GGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
||
| CDS GCA 90 bp | CCCCACTCAGGTTTGACTTCTACCGGCCCCAGGTGGATGCCTGATTaGCACGATGCTCCGCCAAGGGCTGTGACCAGCTGCTCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHSGLTSTGPRWMPD*HDAPPRAVTSCSPW Trigger: CCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATCAGGCATCCACCTGGGGCCGGTAGAAGTCAAACCTGAGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
||
| CDS CCA 90 bp | CCCCATCAGCTCCTCCACCATGGCCACCAGAGCCTTGCCGCTGTCTaGGCTGTGTTCCCGGATCCAGGTGTAGAACTCTCGGGGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHQLLHHGHQSLAAV*AVFPDPGVELSGQD Trigger: ATCCTGCCCCGAGAGTTCTACACCTGGATCCGGGAACACAGCCCAGACAGCGGCAAGGCTCTGGTGGCCATGGTGGAGGAGCTGATGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 ENSMUST00000200246.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGACCATGGCCACCAGAGCCTaGCCGCTGTCTGGGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSYLSTFCCPSLGTAQTMATRA*PLSGLC Trigger: ACACAGCCCAGACAGCGGCAAGGCTCTGGTGGCCAT...GGTCTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCCGGTGCACTGCCAGGTaGGCGTTCCGGCTGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLGTAQTTRCNTSRSYGRCTAR*AFRLKL Trigger: GAGTTTCAGCCGGAACGCCAACCTGGCAGTGCACCG...GCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
||
| CDS-3UTR CAA 90 bp | CCCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCATCCCCCACTCAGGTTaGACTTCTACCGGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLGTAQTTRCNTSRSYGIPHSG*TSTGPR Trigger: CCTGGGGCCGGTAGAAGTCAAACCTGAGTGGGGGAT...GCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | CACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGAGGATGGACCTCTGGTaGAAGCTGCGGCCGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: HWALPRPLGATQVAPMAERMDLW*KLRPQA Trigger: AGCCTGCGGCCGCAGCTTCAACCAGAGGTCCATCCT...CTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS TCA 90 bp | TATCCCCCACTCAGGTTTGACTTCTACCGGCCCCAGGTGGATGCCTaGTTGCCACGATGCTCCGCCAAGGGCTGTGACCAGCTGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: YPPLRFDFYRPQVDA*LPRCSAKGCDQLLS Trigger: GGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATCAGGCATCCACCTGGGGCCGGTAGAAGTCAAACCTGAGTGGGGGATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACGCTGTTCTGTGGTGCTaGGGCCTAGGCTCTGAACTC | + |
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Preference number: 5 (lower is better) Translates to: PGSALLLLEHVLLSLTGHAVLWC*GLGSEL Trigger: GAGTTCAGAGCCTAGGCCCAAGCACCACAGAACAGC...GTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | CCTCACTGGGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCATTAGCCTCCTTCTCCTaGCTCCCAGCACCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PHWALPRPLGATQVAPMALASFS*LPAPGR Trigger: CCTTCCAGGTGCTGGGAGCAAGGAGAAGGAGGCTAA...TGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCCCAGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | CTCCAAAGCAGTCAATCTGAGCTGGGGCTACATGCCTCCATTCCTCCTCAGGAACCGGCGACAGAGCTCTaGGAGCTCCCTGAGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LQSSQSELGLHASIPPQEPATEL*ELPEGF Trigger: GAAGCCCTCAGGGAGCTCCAAGAGCTCTGTCGCCGG...TTCCTGAGGAGGAATGGAGGCATGTAGCCCCAGCTCAGATTGACTGCTTTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCCAGAAAGAATTGTGGGTGTaGAGGGTGTCAGGCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LPSSYLSTFCCPSLGTAQKELWV*RVSGRG Trigger: ACCCCTGCCTGACACCCTCAACACCCACAATTCTTT...CTGGGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTAGCTCCTTCTCCAGTTaGACCACTGGAGCACCCATC | + |
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Preference number: 5 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVSSFSS*TTGAPI Trigger: GATGGGTGCTCCAGTGGTCAAACTGGAGAAGGAGCT...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGCCCTCCTCCTACTTGAGCACGTTCTGCTGTCCCTCACTGGGCACTGCCAAGAATGGGCAATGCTaGTTCCTGGAAGGCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: ALPSSYLSTFCCPSLGTAKNGQC*FLEGLC Trigger: ACACAGGCCTTCCAGGAACAAGCATTGCCCATTCTT...GGCAGTGCCCAGTGAGGGACAGCAGAACGTGCTCAAGTAGGAGGAGGGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | GGCACTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTTGGTGCCTAACAAGGTaGGAGCTCCGACTAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: GTAQTTRCNTSRSYGRAVWCLTR*ELRLKP Trigger: AGGCTTTAGTCGGAGCTCCAACCTTGTTAGGCACCA...AACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS-3UTR CAA 90 bp | GCACTGGAAAGGCTTCCAGAAAGAATTGTGGGTGTTGAGGGTGTCAGGCAGGGGAGCTCCTTCTCCAGTTaGACCACTGGAGCACCCATC | + |
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Preference number: 5 (lower is better) Translates to: ALERLPERIVGVEGVRQGSSFSS*TTGAPI Trigger: GATGGGTGCTCCAGTGGTCAAACTGGAGAAGGAGCT...CCCCTGCCTGACACCCTCAACACCCACAATTCTTTCTGGAAGCCTTTCCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGACCACTCGGTGCAACACAAGTCGCTCCTATGGCAGAGCTGTTCCCTGGCTTCCAGAAAGAATaGTGGGTGTTGAGGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LPRPLGATQVAPMAELFPGFQKE*WVLRVS Trigger: TGACACCCTCAACACCCACAATTCTTTCTGGAAGCC...AGGGAACAGCTCTGCCATAGGAGCGACTTGTGTTGCACCGAGTGGTCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094116.5 |
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| CDS CCA 72 bp | CCGCCAAGGGCTGTGACCAGCTGCTCTCCCTGGGCATaGCATGGAACCGCCTTGGCCTCCGTGCTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: PPRAVTSCSPWA*HGTALASVLPI Trigger: GATGGGGAGCACGGAGGCCAAGGCGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
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| CDS CCA 72 bp | CTGCTCTCCCTGGGCATGGCATGGAACCCACCGCCTTaGCCTCCGTGCTCCCCATCAGCTCCTCCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: LLSLGMAWNPPP*PPCSPSAPPPW Trigger: CCATGGTGGAGGAGCTGATGGGGAGCACGGAGGCCAAGGCGGTGGGTTCCATGCCATGCCCAGGGAGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS GCA 72 bp | GATTGCCACGATGCTCCGCCAAGGGCTGTGACCAGCTaGTCTCCCTGGGCATGGCATGGAACCCACCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: DCHDAPPRAVTS*SPWAWHGTHRL Trigger: AAGGCGGTGGGTTCCATGCCATGCCCAGGGAGAGCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199563.2 |
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| CDS GCA 72 bp | GGTTTGACTTCTACCGGCCCCAGGTGGATGCCTGATTaGCACGATGCTCCGCCAAGGGCTGTGACCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLTSTGPRWMPD*HDAPPRAVTSC Trigger: GCAGCTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATCAGGCATCCACCTGGGGCCGGTAGAAGTCAAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 ENSMUST00000200246.2 |
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| CDS CCA 72 bp | CTCCTCCACCATGGCCACCAGAGCCTTGCCGCTGTCTaGGCTGTGTTCCCGGATCCAGGTGTAGAACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLHHGHQSLAAV*AVFPDPGVELS Trigger: CGAGAGTTCTACACCTGGATCCGGGAACACAGCCCAGACAGCGGCAAGGCTCTGGTGGCCATGGTGGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 ENSMUST00000200246.2 |
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| CDS TCA 72 bp | CTCAGGTTTGACTTCTACCGGCCCCAGGTGGATGCCTaGTTGCCACGATGCTCCGCCAAGGGCTGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LRFDFYRPQVDA*LPRCSAKGCDQ Trigger: CTGGTCACAGCCCTTGGCGGAGCATCGTGGCAATCAGGCATCCACCTGGGGCCGGTAGAAGTCAAACCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094116.5 ENSMUST00000200246.2 |
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| CDS CCA 72 bp | CCTGCCCCATGGCAGCTCCTTCTCCAGTTTGACCACTaGAGCACCCATCTGCTGCTGAGGATCTCCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PAPWQLLLQFDH*STHLLLRISCH Trigger: ATGGCAGGAGATCCTCAGCAGCAGATGGGTGCTCCAGTGGTCAAACTGGAGAAGGAGCTGCCATGGGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 ENSMUST00000200246.2 |
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| CDS TCA 72 bp | TTCTCCAGTTTGACCACTGGAGCACCCATCTGCTGCTaGGGATCTCCTGCCATCTCCAGACGCTCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSSLTTGAPICC*GSPAISRRSFS Trigger: GCTGAAAGAGCGTCTGGAGATGGCAGGAGATCCTCAGCAGCAGATGGGTGCTCCAGTGGTCAAACTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094116.5 ENSMUST00000199563.2 ENSMUST00000200246.2 |
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