Pregenerated sensors for ZSCAN22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054715Ensembl transcript IDs: ENSMUST00000055528.11, ENSMUST00000117189.2, ENSMUST00000119989.3, ENSMUST00000120809.2
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGAAGGCACACAGGTGGGGGATGTATGGCTGACATGTGGAAGGTaGAGGCTACAAGGAGTGGAAGAGGCAAGAGGAAGCCAGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: KEGTQVGDVWLTCGR*RLQGVEEARGSQVW Trigger: CCAGACCTGGCTTCCTCTTGCCTCTTCCACTCCTTGTAGCCTTCACCTTCCACATGTCAGCCATACATCCCCCACCTGTGTGCCTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 90 bp | AGGTTGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTAAATCCGTaGTACCCAGGGCTACAGGCCCTGAGGCAAGGAAGGCTCAGTATA | + |
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Preference number: 1 (lower is better) Translates to: RLSLGLAECWHPLNP*YPGLQALRQGRLSI Trigger: TATACTGAGCCTTCCTTGCCTCAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR TCA 90 bp | AACCTGAAGCTTGGGGTCTTCCTGCCTCGAGGATCTTGGGGCATCTaGGCCTGGAAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: NLKLGVFLPRGSWGI*AWKDTWLYLLWFQE Trigger: TTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGACCCCAAGCTTCAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 90 bp | CATTCTAGGCTGACCAGCAAGGAACCGGCAAGAACAGTAACTATGTaGGAACCTGAAGCTTGGGGTCTTCCTGCCTCGAGGATCTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HSRLTSKEPARTVTM*EPEAWGLPASRILG Trigger: CCCCAAGATCCTCGAGGCAGGAAGACCCCAAGCTTCAGGTTCTCACATAGTTACTGTTCTTGCCGGTTCCTTGCTGGTCAGCCTAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR GCA 90 bp | GGAAAGGAAAGCAAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTaGTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GKESKVNRLSLGLAE*WHPLNPWYPGLQAL Trigger: CAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTTGCTTTCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 90 bp | AAGGAAAGCAAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTaGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: KESKVNRLSLGLAEC*HPLNPWYPGLQALR Trigger: CCTCAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTTGCTTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR TCA 90 bp | TCTTCCATAAATGTCTCTATGAAGGAAACGTGGGGTGGAGGACAGTaGCTACCTAAGGGAGGTATTGGTCACACTCACCCTAGAGATATT | + |
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Preference number: 1 (lower is better) Translates to: SSINVSMKETWGGGQ*LPKGGIGHTHPRDI Trigger: AATATCTCTAGGGTGAGTGTGACCAATACCTCCCTTAGGTAGTCACTGTCCTCCACCCCACGTTTCCTTCATAGAGACATTTATGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 90 bp | TGGTTCCAAGAAATAATGCAGATCATCAGTTTAGTATCTTCTCTCTaGGACCAGCCTGAGTGGGATACAGAGGGCAGTAGGAAGCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: WFQEIMQIISLVSSL*DQPEWDTEGSRKLL Trigger: TAGAAGCTTCCTACTGCCCTCTGTATCCCACTCAGGCTGGTCCCAGAGAGAAGATACTAAACTGATGATCTGCATTATTTCTTGGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 90 bp | TGTATTAAGCTAATGGATGTAAATATAGTAGCTCACGTATATTCATaGCTGAAAAGAAAACCTTGTGAAGTCAGGAGGCCCAGGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: CIKLMDVNIVAHVYS*LKRKPCEVRRPRSQ Trigger: CTGGCTCCTGGGCCTCCTGACTTCACAAGGTTTTCTTTTCAGTCATGAATATACGTGAGCTACTATATTTACATCCATTAGCTTAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGAGTGCTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGTCTCTGGGACCAGCCTaGGTGGGATACAGAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LAECWHPLNPWYPGLQALSLGPA*VGYRGQ Trigger: CTGCCCTCTGTATCCCACTCAGGCTGGTCCCAGAGA...CAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGTGCTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGAGAGCTTGGGGTCTTCCTaGCTCGAGGATCTTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GRVLASSKSVVPRATGPESLGSS*LEDLGA Trigger: TGCCCCAAGATCCTCGAGGCAGGAAGACCCCAAGCT...CTCAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGGTGGGGATGGAATGAAGGAGATGAGCCTGCGGTaGATCCACAGGGCTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGSRKRCARKKVGGDGMKEMSLR*IHRAGA Trigger: GGCTCCAGCCCTGTGGATTCACCGCAGGCTCATCTC...CTTCATTCCATCCCCACCCACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGTGCTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGAGGAAGGCTACAAGGAGTaGAAGAGGCAAGAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRVLASSKSVVPRATGPEEGYKE*KRQEEA Trigger: GGCTTCCTCTTGCCTCTTCCACTCCTTGTAGCCTTC...CTCAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGTGCTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGAGGAAGCTGGACTTACATaGGCACAGGGGCTCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GRVLASSKSVVPRATGPEEAGLT*AQGLFH Trigger: ATGGAAGAGCCCCTGTGCCCATGTAAGTCCAGCTTC...CTCAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGGCTCTTCCATAAATGTCTCTATGAAGGAAACGTGGGGTGGAGGACAGGGATCTTGGGGCATCTaGGCCTGGAAAGACACCTGG | + |
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Preference number: 2 (lower is better) Translates to: HRGSSINVSMKETWGGGQGSWGI*AWKDTW Trigger: CCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCC...CTGTCCTCCACCCCACGTTTCCTTCATAGAGACATTTATGGAAGAGCCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGAGTGCTGGCATCCTCTAAATCCGTGGTACCCAGGGCTACAGGCCCTGGGCAGACCAGTACTTTaGAATCACTTTCACACACTG | + |
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Preference number: 2 (lower is better) Translates to: LAECWHPLNPWYPGLQALGRPVL*NHFHTL Trigger: CAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCC...CAGGGCCTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGGCTCTTCCATAAATGTCTCTATGAAGGAAACGTGGGGTGGAGGACAGCTGGAGCCTGAGATGTaGAAGGAAGACGTGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: HRGSSINVSMKETWGGGQLEPEM*KEDVGG Trigger: TCCTCCCACGTCTTCCTTCCACATCTCAGGCTCCAG...CTGTCCTCCACCCCACGTTTCCTTCATAGAGACATTTATGGAAGAGCCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGGTGGGGATGGAATGAAGAACTATGTGAGAACCTaGAGCTTGGGGTCTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LGSRKRCARKKVGGDGMKNYVRT*SLGSSC Trigger: GCAGGAAGACCCCAAGCTTCAGGTTCTCACATAGTT...CTTCATTCCATCCCCACCCACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | GGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGTGGGACCAGCCTGAGTaGGATACAGAGGGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GMIHCDLGSRKRCARKKVWDQPE*DTEGSR Trigger: CCTACTGCCCTCTGTATCCCACTCAGGCTGGTCCCA...CACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAGATCACAGTGAATCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR TCA 90 bp | CAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAAGACAGTCTCTGGGACCAGCCTaGGTGGGATACAGAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QQADQYFEITFTHCAQRQSLGPA*VGYRGQ Trigger: CTGCCCTCTGTATCCCACTCAGGCTGGTCCCAGAGA...CTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCAAACATAAGACAACAGACAAGGAGTGTAGTTTGCCCAACAGGCAGACCCAGGAAGAAAGTGGGTaGGGATGGAATGAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: WSKHKTTDKECSLPNRQTQEESG*GWNEGR Trigger: CCTGCCTTCATTCCATCCCCACCCACTTTCTTCCTG...GGTCTGCCTGTTGGGCAAACTACACTCCTTGTCTGTTGTCTTATGTTTGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGGAAGCTTTTCAAGGACATCTGAGACATCATAGAGGAAAGAAGGCACACTGGGACCAGCCTGAGTaGGATACAGAGGGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: FREAFQGHLRHHRGKKAHWDQPE*DTEGSR Trigger: CCTACTGCCCTCTGTATCCCACTCAGGCTGGTCCCA...GTGTGCCTTCTTTCCTCTATGATGTCTCAGATGTCCTTGAAAAGCTTCCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTAAATCCGATGAGAGGGATAGCATaGAGAGGCAGCCTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KVNRLSLGLAECWHPLNPMRGIA*RGSLPS Trigger: ACTTGGGAGGCTGCCTCTCCATGCTATCCCTCTCAT...CGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CAA 90 bp | AGTGACTACCTAAGGGAGGTATTGGTCACACTCACCCTAGAGATATaGGGAAGGGTTAGCTGTGCACTGTGTCCACAGCATAAGATACTT | + |
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Preference number: 2 (lower is better) Translates to: SDYLREVLVTLTLEI*GRVSCALCPQHKIL Trigger: AAGTATCTTATGCTGTGGACACAGTGCACAGCTAACCCTTCCCAATATCTCTAGGGTGAGTGTGACCAATACCTCCCTTAGGTAGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAACTGATAAAAATCCAGTaGGAGGCCCAAGGTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: FAQQADQYFEITFTHCAQLIKIQ*EAQGEL Trigger: GAGCTCACCTTGGGCCTCCCACTGGATTTTTATCAG...TTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR CAA 90 bp | AGCCAGGTCTGGAGCAAACATAAGACAACAGACAAGGAGTGTAGTTaGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACT | + |
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Preference number: 2 (lower is better) Translates to: SQVWSKHKTTDKECS*PNRQTSTLKSLSHT Trigger: AGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAACTACACTCCTTGTCTGTTGTCTTATGTTTGCTCCAGACCTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGCAGGAAGAAAGTGGGTaGGGATGGAATGAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TDNILCHGMIHCDLGSRKQEESG*GWNEGR Trigger: CCTGCCTTCATTCCATCCCCACCCACTTTCTTCCTG...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR TCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGAAACTATGTGAGAACCTaGAGCTTGGGGTCTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: DNILCHGMIHCDLGSRKRNYVRT*SLGSSC Trigger: GCAGGAAGACCCCAAGCTTCAGGTTCTCACATAGTT...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGACTGATAAAAATCCAGTaGGAGGCCCAAGGTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: DNILCHGMIHCDLGSRKRLIKIQ*EAQGEL Trigger: GAGCTCACCTTGGGCCTCCCACTGGATTTTTATCAG...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCAAACATAAGACAACAGACAAGGAGTGTAGTTTGCCCAACAGGCAGACCCCTAGAGTAATTGCTTaGACCAAAATGACATATATC | + |
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Preference number: 2 (lower is better) Translates to: WSKHKTTDKECSLPNRQTPRVIA*TKMTYI Trigger: GATATATGTCATTTTGGTCCAAGCAATTACTCTAGG...GGTCTGCCTGTTGGGCAAACTACACTCCTTGTCTGTTGTCTTATGTTTGCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAAGACAGACATATATCCTGACATaGTTGTTTGTTGAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QQADQYFEITFTHCAQRQTYILT*LFVEEV Trigger: CACCTCTTCAACAAACAAGCATGTCAGGATATATGT...CTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGAAGAAGACAGACACTGTaGATTAAAGCAGGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: DNILCHGMIHCDLGSRKRRRQTL*IKAGRT Trigger: TGTTCTCCCTGCTTTAATCCACAGTGTCTGTCTTCT...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAACCTAGAGTAATTGCTTaGACCAAAATGACATATATC | + |
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Preference number: 2 (lower is better) Translates to: FAQQADQYFEITFTHCAQPRVIA*TKMTYI Trigger: GATATATGTCATTTTGGTCCAAGCAATTACTCTAGG...TTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | CTTGGGGTCTTCCTGCCTCGAGGATCTTGGGGCATCTaGGCCTGGAAAGACACCTGGCTTTACTTGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGVFLPRGSWGI*AWKDTWLYLLW Trigger: CCAGAGCAAGTAAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGACCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | CTGACCAGCAAGGAACCGGCAAGAACAGTAACTATGTaGGAACCTGAAGCTTGGGGTCTTCCTGCCTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: LTSKEPARTVTM*EPEAWGLPASR Trigger: CCTCGAGGCAGGAAGACCCCAAGCTTCAGGTTCTCACATAGTTACTGTTCTTGCCGGTTCCTTGCTGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | ACACAGGTGGGGGATGTATGGCTGACATGTGGAAGGTaGAGGCTACAAGGAGTGGAAGAGGCAAGAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: TQVGDVWLTCGR*RLQGVEEARGS Trigger: GCTTCCTCTTGCCTCTTCCACTCCTTGTAGCCTTCACCTTCCACATGTCAGCCATACATCCCCCACCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 72 bp | AGAAGGCACACAGGTGGGGGATGTATGGCTGACATGTaGAAGGTGAAGGCTACAAGGAGTGGAAGAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: RRHTGGGCMADM*KVKATRSGRGK Trigger: CTTGCCTCTTCCACTCCTTGTAGCCTTCACCTTCCACATGTCAGCCATACATCCCCCACCTGTGTGCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR TCA 72 bp | CAAGGAACCGGCAAGAACAGTAACTATGTGAGAACCTaGAGCTTGGGGTCTTCCTGCCTCGAGGATCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QGTGKNSNYVRT*SLGSSCLEDLG Trigger: CCCAAGATCCTCGAGGCAGGAAGACCCCAAGCTTCAGGTTCTCACATAGTTACTGTTCTTGCCGGTTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR GCA 72 bp | AGCAAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTaGTGGCATCCTCTAAATCCGTGGTACCCAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: SKVNRLSLGLAE*WHPLNPWYPGL Trigger: TAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 72 bp | AAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTaGCATCCTCTAAATCCGTGGTACCCAGGGCTACAG | + |
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Preference number: 3 (lower is better) Translates to: KVNRLSLGLAEC*HPLNPWYPGLQ Trigger: CTGTAGCCCTGGGTACCACGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR CCA 72 bp | CAAGTCTGTCTTGGAGTTAGGCATAAAGTAATATTGTaGGGAAGCAGGTACGAAGGCACAGAGTGGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: QVCLGVRHKVIL*GSRYEGTEWAI Trigger: AATGGCCCACTCTGTGCCTTCGTACCTGCTTCCCCACAATATTACTTTATGCCTAACTCCAAGACAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | AGGTCAAAGTGTTTAGGGAAGCTTTTCAAGGACATCTaGGACATCATAGAGGAAAGAAGGCACACAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RSKCLGKLFKDI*DIIEERRHTGG Trigger: CCCACCTGTGTGCCTTCTTTCCTCTATGATGTCTCAGATGTCCTTGAAAAGCTTCCCTAAACACTTTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTAAATCCGAGGCAGACCAGTACTTaGAAATCACTTTCACACACT | + |
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Preference number: 3 (lower is better) Translates to: KVNRLSLGLAECWHPLNPRQTST*KSLSHT Trigger: AGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCT...CGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR TCA 72 bp | AGAGGTGACTCACTGACAACATATTGTGTCATGGAATaGTTCACTGTGATCTGGGTAGCAGAAAGAGATGCG | + |
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Preference number: 3 (lower is better) Translates to: RGDSLTTYCVME*FTVIWVAERDA Trigger: CGCATCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGTGAGTCACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGGCATAAAGTAATATaGTGGGGAAGCAGGTACGAA | + |
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Preference number: 3 (lower is better) Translates to: TDNILCHGMIHCDLGSRKRHKVI*WGSRYE Trigger: TTCGTACCTGCTTCCCCACAATATTACTTTATGCCT...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAGAGTAATTGCTTGGACCAAAATGACATATATCCTGACATGCTTGTTTGTTGACACCTGGCTTTACTaGCTCTGGTTCCAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: PRVIAWTKMTYILTCLFVDTWLY*LWFQEI Trigger: TATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTC...AACAAACAAGCATGTCAGGATATATGTCATTTTGGTCCAAGCAATTACTCTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | ACACACTGTGCTCAAAGACAGATGACAACATTCCTTTaGCAACATTTCAGGATACCTAGAGTAATTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: THCAQRQMTTFL*QHFRIPRVIAW Trigger: CCAAGCAATTACTCTAGGTATCCTGAAATGTTGTCAAAGGAATGTTGTCATCTGTCTTTGAGCACAGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | GACCAAAATGACATATATCCTGACATGCTTGTTTGTTaGAGAGGTGACTCACTGACAACATATTGTGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: DQNDIYPDMLVC*RGDSLTTYCVM Trigger: CATGACACAATATGTTGTCAGTGAGTCACCTCTTCAACAAACAAGCATGTCAGGATATATGTCATTTTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR TCA 72 bp | CTAATGGATGTAAATATAGTAGCTCACGTATATTCATaGCTGAAAAGAAAACCTTGTGAAGTCAGGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LMDVNIVAHVYS*LKRKPCEVRRP Trigger: GGGCCTCCTGACTTCACAAGGTTTTCTTTTCAGTCATGAATATACGTGAGCTACTATATTTACATCCATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| 3UTR TCA 72 bp | TTGAAATCACTTTCACACACTGTGCTCAAAGACAGATaGCAACATTCCTTTGACAACATTTCAGGATACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKSLSHTVLKDR*QHSFDNISGYL Trigger: TAGGTATCCTGAAATGTTGTCAAAGGAATGTTGTCATCTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGAGCCTGAGATGTGGAAGGAAGACGTGGGAGGAGAAGACAGACACTTGTACTCGCTGGTGCTaGGTGAGGTGGGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGWSLRCGRKTWEEKTDTCTRWC*VRWVLR Trigger: CCGCAGCACCCACCTCACGCAGCACCAGCGAGTACA...AGTGTCTGTCTTCTCCTCCCACGTCTTCCTTCCACATCTCAGGCTCCAGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | TCTTCCTGCCTCGAGGATCTTGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTGGTGGGTGCTCCGACTaGATACCTTCCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLEDLGASEPGKTPGFGGCSD*IPSHTQ Trigger: CTGAGTGTGGGAAGGTATTCAGTCGGAGCACCCACC...AAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | GAACCTGAAGCTTGGGGTCTTCCTGCCTCGAGGATCTTGGGGCATCTGAGCCTGGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPEAWGLPASRILGHLSLVGLQS*SVLECF Trigger: AAAACATTCCAGAACACTTCAGCTCTGGAGGCCCAC...CAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGACCCCAAGCTTCAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGAGCCTGAGATGTGGAAGGAAGACGTGGGAGGAGAAGACAGACACTACACGCATGGGGCTTTaGTCCTGTGTGAACAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGWSLRCGRKTWEEKTDTTRMGL*SCVNNL Trigger: CAGGTTGTTCACACAGGAGCAAAGCCCCATGCGTGT...AGTGTCTGTCTTCTCCTCCCACGTCTTCCTTCCACATCTCAGGCTCCAGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGGTGGGGATGGAATGAAGGACTCATGGCCAGGCTaGTCTTTGGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGSRKRCARKKVGGDGMKDSWPG*SLGASM Trigger: CATGGATGCCCCCAAAGACCAGCCTGGCCATGAGTC...CTTCATTCCATCCCCACCCACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| 3UTR CAA 72 bp | GAACCTGAAGCTTGGGGTCTTCCTGCCTCGAGGATCTaGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EPEAWGLPASRI*GHLSLERHLAL Trigger: TAAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGACCCCAAGCTTCAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | TCTTCCTGCCTCGAGGATCTTGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTGCCCCAGAGCTTTTCTaGAATCCATCTCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLEDLGASEPGKTPGFAPELF*NPSLGQ Trigger: CTGCCCAAGAGATGGATTTCAGAAAAGCTCTGGGGC...AAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGGTGTGTACTCGCTGGTaGTGCGTGAGGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLVCTRW*CVRWVL Trigger: CAGCACCCACCTCACGCAGCACCAGCGAGTACACAC...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGGAGGGAGGAGCTTTGTaGGAAGGCCTTCGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLEGGAL*EGLRAV Trigger: GACTGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTC...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGCGTGCAGCCTCAGGGTaGGCAGTAAAGCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLRAASG*AVKLGL Trigger: CAGCCCTAGCTTTACTGCCCACCCTGAGGCTGCACG...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGGCGCCTGATGAGGGCTaGATGCCTCCTCATAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLAPDEG*MPPHSG Trigger: TCCGCTATGAGGAGGCATCCAGCCCTCATCAGGCGC...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCTGGAGCCTGAGATGTGGAAGGAAGACGTGGGAGGAGAAGACAGACACTGCCAAATTTCTCCTCTaGAGAAGCCTTGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGWSLRCGRKTWEEKTDTAKFLL*RSLVLG Trigger: TCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGC...AGTGTCTGTCTTCTCCTCCCACGTCTTCCTTCCACATCTCAGGCTCCAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAGAGGGAGGAGCTTTGTaGGAAGGCCTTCGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSEGGAL*EGLRAV Trigger: GACTGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTC...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAGCGCCTGATGAGGGCTaGATGCCTCCTCATAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSAPDEG*MPPHSG Trigger: TCCGCTATGAGGAGGCATCCAGCCCTCATCAGGCGC...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGGTGGGGATGGAATGAAGCTTGGGAAGGGAAGTTaGGCCACATGTTGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSRKRCARKKVGGDGMKLGKGS*ATCWNR Trigger: ACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAG...CTTCATTCCATCCCCACCCACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | TCTTCCTGCCTCGAGGATCTTGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTGCCAAATTTCTCCTCTaGAGAAGCCTTGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSCLEDLGASEPGKTPGFAKFLL*RSLVLG Trigger: TCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGC...AAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAGGCAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | GGATTAAAGCAGGGAGAACATGAGAGGGATAGCATGGAGAGGCAGCCTCCCAAGGGAGGATTTCTTCTCTaGGCAAGTATCTGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLKQGEHERDSMERQPPKGGFLL*ASIWRH Trigger: GTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCC...CTTGGGAGGCTGCCTCTCCATGCTATCCCTCTCATGTTCTCCCTGCTTTAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGTGTACTCGCTGGTGCTaGGTGAGGTGGGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVCTRWC*VRWVLR Trigger: CCGCAGCACCCACCTCACGCAGCACCAGCGAGTACA...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | TTTGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAATGTACTCGCTGGTGCTaGGTGAGGTGGGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FAQQADQYFEITFTHCAQCTRWC*VRWVLR Trigger: CCGCAGCACCCACCTCACGCAGCACCAGCGAGTACA...TTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATGTGTGTACTCGCTGGTaGTGCGTGAGGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNVCTRW*CVRWVL Trigger: CAGCACCCACCTCACGCAGCACCAGCGAGTACACAC...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGTTTGGAGGACGACTCTaGCCTCAGCCACTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLFGGRL*PQPLAT Trigger: TGTTGCCAGTGGCTGAGGCCAGAGTCGTCCTCCAAA...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGGCTCTTCCATAAATGTCTCTATGAAGGAAACGTGGGGTGGAGGACAGGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRGSSINVSMKETWGGGQGWLSE*LSGLQV Trigger: CACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCC...CTGTCCTCCACCCCACGTTTCCTTCATAGAGACATTTATGGAAGAGCCCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAGACTCATGGCCAGGCTaGTCTTTGGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSDSWPG*SLGASM Trigger: CATGGATGCCCCCAAAGACCAGCCTGGCCATGAGTC...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | AAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTCCACTCTTTGGGCACTaGGCACCCACCCAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDTWLYLLWFQEIMQIISPLFGH*APTQAW Trigger: CCAGGCCTGGGTGGGTGCTCAGTGCCCAAAGAGTGG...ACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
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| CDS-3UTR TCA 90 bp | GGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGGTGGGCAACGCGACTaGAGGCTTTACCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMIHCDLGSRKRCARKKVGGQRD*RLYHTL Trigger: AAGAGTGTGGTAAAGCCTTCAGTCGCGTTGCCCACC...CACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAGATCACAGTGAATCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGTGTACTCGCTGGTGCTaGGTGAGGTGGGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLRECTRWC*VRWVLR Trigger: CCGCAGCACCCACCTCACGCAGCACCAGCGAGTACA...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTAAATCCGGAGTGGACTCTCAGGTaGCGGACCAGAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KVNRLSLGLAECWHPLNPEWTLR*RTRAEQ Trigger: CTGTTCAGCTCTGGTCCGGCACCTGAGAGTCCACTC...CGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| CDS-3UTR GCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACGAGGGAGGAGCTTTGTaGGAAGGCCTTCGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYEGGAL*EGLRAV Trigger: GACTGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTC...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCTGTTCCCAGAGTACTaGGCTCAGAGGGCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNLFPEY*AQRALG Trigger: CCCAAGAGCCCTCTGAGCCCAGTACTCTGGGAACAG...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTCATAGCGGAAGTGCCTaGAGCGCAATCGTGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCHSGSA*SAIVQP Trigger: AGGCTGCACGATTGCGCTTCAGGCACTTCCGCTATG...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGGGAGGATTTCTTCTCTaGGCAAGTATCTGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLGGFLL*ASIWRH Trigger: GTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCC...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATGGTGGGCAACGCGACTaGAGGCTTTACCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNGGQRD*RLYHTL Trigger: AAGAGTGTGGTAAAGCCTTCAGTCGCGTTGCCCACC...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGGCTCTGTTTGCAACTTaGCTCTTCACGTTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWDTEGSRKLLEASPIGLALFAT*LFTFHS Trigger: GGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGC...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAACACGCATGGGGCTTTaGTCCTGTGTGAACAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSTRMGL*SCVNNL Trigger: CAGGTTGTTCACACAGGAGCAAAGCCCCATGCGTGT...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | CAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAAGACAGGAGTGGACTCTCAGGTaGCGGACCAGAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQADQYFEITFTHCAQRQEWTLR*RTRAEQ Trigger: CTGTTCAGCTCTGGTCCGGCACCTGAGAGTCCACTC...CTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACGAGTGGACTCTCAGGTaGCGGACCAGAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYEWTLR*RTRAEQ Trigger: CTGTTCAGCTCTGGTCCGGCACCTGAGAGTCCACTC...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGCGTGCAGCCTCAGGGTaGGCAGTAAAGCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLRERAASG*AVKLGL Trigger: CAGCCCTAGCTTTACTGCCCACCCTGAGGCTGCACG...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATTTTGGAGGACGACTCTaGCCTCAGCCACTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNFGGRL*PQPLAT Trigger: TGTTGCCAGTGGCTGAGGCCAGAGTCGTCCTCCAAA...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSGWLSE*LSGLQV Trigger: CACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCC...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACGACTCATGGCCAGGCTaGTCTTTGGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYDSWPG*SLGASM Trigger: CATGGATGCCCCCAAAGACCAGCCTGGCCATGAGTC...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCACTTGGGAAGGGAAGTTaGGCCACATGTTGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSLGKGS*ATCWNR Trigger: ACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAG...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| 3UTR CAA 72 bp | CTAAGGGAGGTATTGGTCACACTCACCCTAGAGATATaGGGAAGGGTTAGCTGTGCACTGTGTCCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LREVLVTLTLEI*GRVSCALCPQH Trigger: ATGCTGTGGACACAGTGCACAGCTAACCCTTCCCAATATCTCTAGGGTGAGTGTGACCAATACCTCCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS-3UTR TCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGGTGGGTGCTCCGACTaGATACCTTCCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLREGGCSD*IPSHTQ Trigger: CTGAGTGTGGGAAGGTATTCAGTCGGAGCACCCACC...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR TCA 90 bp | CAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAAGACAGGGTGGGCAACGCGACTaGAGGCTTTACCACACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQADQYFEITFTHCAQRQGGQRD*RLYHTL Trigger: AAGAGTGTGGTAAAGCCTTCAGTCGCGTTGCCCACC...CTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGGTGCCGGACCAGAGCTaGACAGTCACTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVVPDQS*TVTEGF Trigger: AAAGCCTTCAGTGACTGTTCAGCTCTGGTCCGGCAC...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | GGATTAAAGCAGGGAGAACATGAGAGGGATAGCATGGAGAGGCAGCCTCCCAAGCTGTATTGCTCTGTTTaGAACTTGCCTCTTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKQGEHERDSMERQPPKLYCSV*NLPLHV Trigger: AACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAG...CTTGGGAGGCTGCCTCTCCATGCTATCCCTCTCATGTTCTCCCTGCTTTAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR GCA 90 bp | AAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTGTGTGTACTCGCTGGTaGTGCGTGAGGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDTWLYLLWFQEIMQIISVCTRW*CVRWVL Trigger: CAGCACCCACCTCACGCAGCACCAGCGAGTACACAC...ACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGAGAGGGAGGAGCTTTGTaGGAAGGCCTTCGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKREGGAL*EGLRAV Trigger: GACTGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTC...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACTCTGGCCTCAGCCACTaGCAACATAGCTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYSGLSH*QHSSRS Trigger: ACTGCGAGAGCTATGTTGCCAGTGGCTGAGGCCAGA...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCAGCATCTGTTCTTTaGAGGACGACTCTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNPASVL*RTTLAS Trigger: TGAGGCCAGAGTCGTCCTCCAAAGAACAGATGCTGG...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTCCTTTCCACTCTTTaGGCACTGAGCACCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVLLSTL*ALSTHP Trigger: TGGGTGGGTGCTCAGTGCCCAAAGAGTGGAAAGGAG...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTTTCACGTTCCACTCCTaGCTCCCATCCTCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCFTFHS*LPSSPV Trigger: GACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAA...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGACTCATGGCCAGGCTaGTCTTTGGGGGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLREDSWPG*SLGASM Trigger: CATGGATGCCCCCAAAGACCAGCCTGGCCATGAGTC...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCATCTTTCACCTTCACCTaGAGGAAGCTATCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSSFTFT*RKLSCS Trigger: GGAACAGGATAGCTTCCTTCAGGTGAAGGTGAAAGA...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR TCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACCTCCTGTCCAGCAGTTaGGTCATATCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYLLSSS*VISSTR Trigger: TCTGGTGGAGGATATGACTCAACTGCTGGACAGGAG...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTCTCCTGTCCAGCAGTTaGGTCATATCCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCLLSSS*VISSTR Trigger: TCTGGTGGAGGATATGACTCAACTGCTGGACAGGAG...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | GGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGGCAAAACGCTTCCCATaGCAGTTTCAGTCGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GMIHCDLGSRKRCARKKVAKRFP*QFQSPF Trigger: AAATGGCGACTGAAACTGTCATGGGAAGCGTTTTGC...CACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAGATCACAGTGAATCATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
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| CDS-3UTR TCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGGCCCCAGAGCTTTTCTaGAATCCATCTCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVAPELF*NPSLGQ Trigger: CTGCCCAAGAGATGGATTTCAGAAAAGCTCTGGGGC...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTAACAGGTTGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTAAATCCGGGAGGATTTCTTCTCTaGGCAAGTATCTGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVNRLSLGLAECWHPLNPGGFLL*ASIWRH Trigger: GTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCC...CGGATTTAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
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| CDS-3UTR TCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATGGAGGATTTCTTCTCTaGGCAAGTATCTGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNGGFLL*ASIWRH Trigger: GTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCC...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGAGGTGGGTGCTCCGACTaGATACCTTCCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKRGGCSD*IPSHTQ Trigger: CTGAGTGTGGGAAGGTATTCAGTCGGAGCACCCACC...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGTGCCGGACCAGAGCTaGACAGTCACTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLREVPDQS*TVTEGF Trigger: AAAGCCTTCAGTGACTGTTCAGCTCTGGTCCGGCAC...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATGCTCTGTTTGCAACTTaGCTCTTCACGTTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNALFAT*LFTFHS Trigger: GGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGC...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR GCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACACACGCATGGGGCTTTaGTCCTGTGTGAACAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYTRMGL*SCVNNL Trigger: CAGGTTGTTCACACAGGAGCAAAGCCCCATGCGTGT...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGTTCACGTTCCACTCCTaGCTCCCATCCTCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLREFTFHS*LPSSPV Trigger: GACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAA...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYGWLSE*LSGLQV Trigger: CACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCC...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CCA 90 bp | GGATTAAAGCAGGGAGAACATGAGAGGGATAGCATGGAGAGGCAGCCTCCCAAGAACATTCACTATCCTTaGAGGATTTCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQGEHERDSMERQPPKNIHYP*RISSLS Trigger: GCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTT...CTTGGGAGGCTGCCTCTCCATGCTATCCCTCTCATGTTCTCCCTGCTTTAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | TTTGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FAQQADQYFEITFTHCAQVGLQS*SVLECF Trigger: AAAACATTCCAGAACACTTCAGCTCTGGAGGCCCAC...TTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR TCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYVGLQS*SVLECF Trigger: AAAACATTCCAGAACACTTCAGCTCTGGAGGCCCAC...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR TCA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGGTGCCGGACCAGAGCTaGACAGTCACTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDNILCHGMIHCDLGSRKVPDQS*TVTEGF Trigger: AAAGCCTTCAGTGACTGTTCAGCTCTGGTCCGGCAC...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR GCA 90 bp | TGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTTAGTATCTGTGTGTACTCGCTGGTaGTGCGTGAGGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLYLLWFQEIMQIISLVSVCTRW*CVRWVL Trigger: CAGCACCCACCTCACGCAGCACCAGCGAGTACACAC...AGATACTAAACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR CCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGATCTGGCCTCAGCCACTaGCAACATAGCTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKRSGLSH*QHSSRS Trigger: ACTGCGAGAGCTATGTTGCCAGTGGCTGAGGCCAGA...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR CCA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGCTCCTTTCCACTCTTTaGGCACTGAGCACCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDNILCHGMIHCDLGSRKLLSTL*ALSTHP Trigger: TGGGTGGGTGCTCAGTGCCCAAAGAGTGGAAAGGAG...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGTCTTTCACCTTCACCTaGAGGAAGCTATCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVSFTFT*RKLSCS Trigger: GGAACAGGATAGCTTCCTTCAGGTGAAGGTGAAAGA...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGTAATTGCTTGGACCAAAATGACATATATCCTGACATGCTTGTTTGTTCATAGCGGAAGTGCCTaGAGCGCAATCGTGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVIAWTKMTYILTCLFVHSGSA*SAIVQP Trigger: AGGCTGCACGATTGCGCTTCAGGCACTTCCGCTATG...AACAAACAAGCATGTCAGGATATATGTCATTTTGGTCCAAGCAATTACTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCAAAACGCTTCCCATaGCAGTTTCAGTCGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCAKRFP*QFQSPF Trigger: AAATGGCGACTGAAACTGTCATGGGAAGCGTTTTGC...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR TCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGAGCCCCAGAGCTTTTCTaGAATCCATCTCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKRAPELF*NPSLGQ Trigger: CTGCCCAAGAGATGGATTTCAGAAAAGCTCTGGGGC...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGGCCAAATTTCTCCTCTaGAGAAGCCTTGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVAKFLL*RSLVLG Trigger: TCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGC...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTTAGTATCTGAGTGGACTCTCAGGTaGCGGACCAGAGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: WLYLLWFQEIMQIISLVSEWTLR*RTRAEQ Trigger: CTGTTCAGCTCTGGTCCGGCACCTGAGAGTCCACTC...AGATACTAAACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATATATGGATCTTTAGGTaGACCATGAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNIWIFR*TMRAEL Trigger: CAGCTCAGCTCTCATGGTGCACCTAAAGATCCATAT...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGACCAGCATCTGTTCTTTaGAGGACGACTCTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKRPASVL*RTTLAS Trigger: TGAGGCCAGAGTCGTCCTCCAAAGAACAGATGCTGG...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCATTCAGTCGCCATTTTTaGTGGCTCCAATTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSRKLLEASPIGLNPCSFSRHF*WLQFIC Trigger: ACAGATGAATTGGAGCCACCAAAAATGGCGACTGAA...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| 3UTR CAA 72 bp | TGTCTTTCTGAGGGAAAGGAAAGCAAAGTTAACAGGTaGAGTTTAGGACTGGCAGAGTGCTGGCATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CLSEGKESKVNR*SLGLAECWHPL Trigger: TAGAGGATGCCAGCACTCTGCCAGTCCTAAACTCAACCTGTTAACTTTGCTTTCCTTTCCCTCAGAAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS-3UTR TCA 90 bp | AAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDTWLYLLWFQEIMQIISVGLQS*SVLECF Trigger: AAAACATTCCAGAACACTTCAGCTCTGGAGGCCCAC...ACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACATATGGATCTTTAGGTaGACCATGAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLSDFLDVNPLREAVLYIWIFR*TMRAEL Trigger: CAGCTCAGCTCTCATGGTGCACCTAAAGATCCATAT...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| 3UTR CAA 72 bp | AAGGAGTGTAGTTTGCCCAACAGGCAGACCAGTACTTaGAAATCACTTTCACACACTGTGCTCAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KECSLPNRQTST*KSLSHTVLKDR Trigger: TCTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAACTACACTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTTAGTATCTGCCCCAGAGCTTTTCTaGAATCCATCTCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLYLLWFQEIMQIISLVSAPELF*NPSLGQ Trigger: CTGCCCAAGAGATGGATTTCAGAAAAGCTCTGGGGC...AGATACTAAACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR TCA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGGCCAAATTTCTCCTCTaGAGAAGCCTTGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDNILCHGMIHCDLGSRKAKFLL*RSLVLG Trigger: TCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGC...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTATTGCTCTGTTTaGAACTTGCCTCTTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVLYCSV*NLPLHV Trigger: AACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAG...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGTAATTGCTTGGACCAAAATGACATATATCCTGACATGCTTGTTTGTTACACGCATGGGGCTTTaGTCCTGTGTGAACAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVIAWTKMTYILTCLFVTRMGL*SCVNNL Trigger: CAGGTTGTTCACACAGGAGCAAAGCCCCATGCGTGT...AACAAACAAGCATGTCAGGATATATGTCATTTTGGTCCAAGCAATTACTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR GCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGATATGGATCTTTAGGTaGACCATGAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLREIWIFR*TMRAEL Trigger: CAGCTCAGCTCTCATGGTGCACCTAAAGATCCATAT...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGGGAAGCTTTTCAAGGACATCTGAGACATCATAGAGGAAAGAAGGCACACATATGGATCTTTAGGTaGACCATGAGAGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FREAFQGHLRHHRGKKAHIWIFR*TMRAEL Trigger: CAGCTCAGCTCTCATGGTGCACCTAAAGATCCATAT...GTGTGCCTTCTTTCCTCTATGATGTCTCAGATGTCCTTGAAAAGCTTCCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATAGTCGCCATTTTTGGTaGCTCCAATTCATCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: WDTEGSRKLLEASPIGLNSRHFW*LQFICI Trigger: AATACAGATGAATTGGAGCCACCAAAAATGGCGACT...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGTAATTGCTTGGACCAAAATGACATATATCCTGACATGCTTGTTTGTTGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVIAWTKMTYILTCLFVGWLSE*LSGLQV Trigger: CACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCC...AACAAACAAGCATGTCAGGATATATGTCATTTTGGTCCAAGCAATTACTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGTAATTGCTTGGACCAAAATGACATATATCCTGACATGCTTGTTTGTTCTTGGGAAGGGAAGTTaGGCCACATGTTGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVIAWTKMTYILTCLFVLGKGS*ATCWNR Trigger: ACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAG...AACAAACAAGCATGTCAGGATATATGTCATTTTGGTCCAAGCAATTACTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTAACATTCACTATCCTTaGAGGATTTCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCNIHYP*RISSLS Trigger: GCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTT...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGAACATTCACTATCCTTaGAGGATTTCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAQLSDFLDVNPLREAVNIHYP*RISSLS Trigger: GCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTT...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGAGTCGCCATTTTTGGTaGCTCCAATTCATCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLRESRHFW*LQFICI Trigger: AATACAGATGAATTGGAGCCACCAAAAATGGCGACT...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CCA 90 bp | AAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTTCAGTCGCCATTTTTaGTGGCTCCAATTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTWLYLLWFQEIMQIISFSRHF*WLQFIC Trigger: ACAGATGAATTGGAGCCACCAAAAATGGCGACTGAA...ACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR CCA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGAACATTCACTATCCTTaGAGGATTTCTTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHWVAQLSDFLDVNPLRENIHYP*RISSLS Trigger: GCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTT...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR GCA 90 bp | GACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGACCAATTCATCTGTATTaGTCTGTTTGCAACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DNILCHGMIHCDLGSRKRPIHLY*SVCNLP Trigger: AGGCAAGTTGCAAACAGAGCAATACAGATGAATTGG...TCTCTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS CCA 90 bp | AATCGTGCAGCCTCAGGGTGGGCAGTAAAGCTAGGGCTGGATTCCTaGCTCGGGGAGTCGCTAGCTTCTTCCTCCTCTTTCACCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NRAASGWAVKLGLDS*LGESLASSSSFTFT Trigger: GGTGAAGGTGAAAGAGGAGGAAGAAGCTAGCGACTCCCCGAGCCAGGAATCCAGCCCTAGCTTTACTGCCCACCCTGAGGCTGCACGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS TCA 90 bp | TCTTCACGTTCCACTCCTGGCTCCCATCCTCTCCTGTCCAGCAGTTaGGTCATATCCTCCACCAGAACGGCAGCCTCCTTTCCACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTPGSHPLLSSS*VISSTRTAASFPLF Trigger: AAAGAGTGGAAAGGAGGCTGCCGTTCTGGTGGAGGATATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS TCA 90 bp | CTTGTCTTGGGAAGGGAAGTTGGGCCACATGTTGGAACCGTTTCCTaGGGTGTTAGACTCATGGCCAGGCTGGTCTTTGGGGGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLGREVGPHVGTVS*GVRLMARLVFGGIH Trigger: ATGGATGCCCCCAAAGACCAGCCTGGCCATGAGTCTAACACCTCAGGAAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | CTCGAGGATCTTGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTACTTGCTCTTCTTGGGAAGGGAAGTaGGGCCACATGTTGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: LEDLGASEPGKTPGFTCSSWEGK*GHMLEP Trigger: CGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGA...AGAGCAAGTAAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CAA 90 bp | AAACCTTGTGAAGTCAGGAGGCCCAGGAGCCAGGGGATTGTCTTTCTGAGGGAATCTTGGGAAGGGAAGTaGGGCCACATGTTGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: KPCEVRRPRSQGIVFLRESWEGK*GHMLEP Trigger: CGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGA...TTCCCTCAGAAAGACAATCCCCTGGCTCCTGGGCCTCCTGACTTCACAAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATGAGGGAGGAGCTTaGTGCGAAGGCCTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EWDTEGSRKLLEASPIGLNEGGA*CEGLRA Trigger: TGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTCATT...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | GGAATGATTCACTGTGATCTGGGTAGCAGAAAGAGATGCGCCAGGAAGAAAGTGAATGAGGGAGGAGCTTaGTGCGAAGGCCTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GMIHCDLGSRKRCARKKVNEGGA*CEGLRA Trigger: TGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTCATT...CACTTTCTTCCTGGCGCATCTCTTTCTGCTACCCAGATCACAGTGAATCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCAAATGAGGGAGGAGCTTaGTGCGAAGGCCTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGSRKLLEASPIGLNPCSNEGGA*CEGLRA Trigger: TGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTCATT...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS CCA 90 bp | ATCTGTATTGCTCTGTTTGCAACTTGCCTCTTCACGTTCCACTCCTaGCTCCCATCCTCTCCTGTCCAGCAGTTGAGTCATATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ICIALFATCLFTFHS*LPSSPVQQLSHILH Trigger: GTGGAGGATATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGGGCTCTTCCATAAATGTCTCTATGAAGGAAACGTGGGGTGGAGGACAGTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HRGSSINVSMKETWGGGQSSEEA*SWEGKL Trigger: CAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGA...CTGTCCTCCACCCCACGTTTCCTTCATAGAGACATTTATGGAAGAGCCCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117189.2 |
||
| CDS GCA 90 bp | CATTTTTGGTGGCTCCAATTCATCTGTATTGCTCTGTTTGCAACTTaGCTCTTCACGTTCCACTCCTGGCTCCCATCCTCTCCTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFWWLQFICIALFAT*LFTFHSWLPSSPVQ Trigger: CTGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS CCA 90 bp | GACTTCATCCAGAGTGCTCCTAGGAATTCTGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTGTGGGCAAGGGTAGATTTTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DFIQSAPRNSGWLSE*LSGLQVWARVDFGK Trigger: TTTGCCAAAATCTACCCTTGCCCACACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCCAGAATTCCTAGGAGCACTCTGGATGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EWDTEGSRKLLEASPIGLSSEEA*SWEGKL Trigger: CAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGA...CAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS TCA 90 bp | ATAGGGCGTCTTCTGAGAGTGGCTCTTCTGGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTTCAAACATTCACTATCCTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IGRLLRVALLVGLQS*SVLECFQTFTILGG Trigger: TCCTCCAAGGATAGTGAATGTTTGAAAACATTCCAGAACACTTCAGCTCTGGAGGCCCACCAGAAGAGCCACTCTCAGAAGACGCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTTCCAGCATCTGTTCTTaGGAGGACGACTCTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSTIIRFLRCQSSQGGCSSICS*EDDSGL Trigger: GAGGCCAGAGTCGTCCTCCAAAGAACAGATGCTGGA...ACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATACAGAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATTCTCCTGTCCAGCAGTaGAGTCATATCCTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WDTEGSRKLLEASPIGLNSPVQQ*SHILHQ Trigger: CTGGTGGAGGATATGACTCAACTGCTGGACAGGAGA...ATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTCTGTATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGTCTTGGGAAGGGAAGTaGGGCCACATGTTGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: WVAQLSDFLDVNPLREAVSWEGK*GHMLEP Trigger: CGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGA...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCCCAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAATCTCCTGTCCAGCAGTaGAGTCATATCCTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FAQQADQYFEITFTHCAQSPVQQ*SHILHQ Trigger: CTGGTGGAGGATATGACTCAACTGCTGGACAGGAGA...TTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTGGGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
||
| CDS-3UTR CAA 90 bp | CTCGAGGATCTTGGGGCATCTGAGCCTGGAAAGACACCTGGCTTTACTTGCTCTAAACATTCACTATCCTaGGAGGATTTCTTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEDLGASEPGKTPGFTCSKHSLS*EDFFSE Trigger: CTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTT...AGAGCAAGTAAAGCCAGGTGTCTTTCCAGGCTCAGATGCCCCAAGATCCTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CAA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGAATGAGGGAGGAGCTTaGTGCGAAGGCCTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TDNILCHGMIHCDLGSRKNEGGA*CEGLRA Trigger: TGCCCGAAGGCCTTCGCACAAAGCTCCTCCCTCATT...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
||
| CDS-3UTR CAA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGTCCAGCATCTGTTCTTaGGAGGACGACTCTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TDNILCHGMIHCDLGSRKSSICS*EDDSGL Trigger: GAGGCCAGAGTCGTCCTCCAAAGAACAGATGCTGGA...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGTAGGAAGCTTCTAGAAGCTTCACCAATTGGTCTGAATCCGTGTTCATCTGTATTGCTCTGTTaGCAACTTGCCTCTTCACGT | + |
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Preference number: 5 (lower is better) Translates to: EGSRKLLEASPIGLNPCSSVLLC*QLASSR Trigger: ACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGA...TGAACACGGATTCAGACCAATTGGTGAAGCTTCTAGAAGCTTCCTACTGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CAA 90 bp | AAAGACACCTGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTCTTGGGAAGGGAAGTaGGGCCACATGTTGGAACCG | + |
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Preference number: 5 (lower is better) Translates to: KDTWLYLLWFQEIMQIISSWEGK*GHMLEP Trigger: CGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGA...ACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCAGGTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR CAA 90 bp | GCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGCTGTACTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: AQLSDFLDVNPLREAVLYSSEEA*SWEGKL Trigger: CAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGA...GTACAGCACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CAA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGTGCTCTGTTTGCAACTaGCCTCTTCACGTTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: TDNILCHGMIHCDLGSRKCSVCN*PLHVPL Trigger: GAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCA...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055528.11 |
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| CDS-3UTR CAA 90 bp | ACTGACAACATATTGTGTCATGGAATGATTCACTGTGATCTGGGTAGCAGAAAGTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: TDNILCHGMIHCDLGSRKSSEEA*SWEGKL Trigger: CAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGA...CTTTCTGCTACCCAGATCACAGTGAATCATTCCATGACACAATATGTTGTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS CCA 90 bp | CCAGAGCTGAAGTGTTCTGGAATGTTTTCAAACATTCACTATCCTTaGAGGATTTCTTCTCTGAGCAAGTATCTGGAGGCACTGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PELKCSGMFSNIHYP*RISSLSKYLEALSH Trigger: ATGAGACAGTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTTGAAAACATTCCAGAACACTTCAGCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CAA 90 bp | AGACACTGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGTCTGTATTGCTCTGTTaGCAACTTGCCTCTTCACGT | + |
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Preference number: 5 (lower is better) Translates to: RHWVAQLSDFLDVNPLRESVLLC*QLASSR Trigger: ACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGA...CTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCAGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS-3UTR CAA 90 bp | CAACAGGCAGACCAGTACTTTGAAATCACTTTCACACACTGTGCTCAAAGACAGAAACATTCACTATCCTaGGAGGATTTCTTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QQADQYFEITFTHCAQRQKHSLS*EDFFSE Trigger: CTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTT...CTGTCTTTGAGCACAGTGTGTGAAAGTGATTTCAAAGTACTGGTCTGCCTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS-3UTR CAA 90 bp | TGGGTAGCACAATTATCAGATTTCTTAGATGTCAATCCTCTCAGGGAGGCTGTGAAACATTCACTATCCTaGGAGGATTTCTTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: WVAQLSDFLDVNPLREAVKHSLS*EDFFSE Trigger: CTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTT...CACAGCCTCCCTGAGAGGATTGACATCTAAGAAATCTGATAATTGTGCTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTTACTTGCTCTGGTTCCAAGAAATAATGCAGATCATCAGTTTAGTATCTAAACATTCACTATCCTaGGAGGATTTCTTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: WLYLLWFQEIMQIISLVSKHSLS*EDFFSE Trigger: CTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTT...AGATACTAAACTGATGATCTGCATTATTTCTTGGAACCAGAGCAAGTAAAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 |
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| CDS CCA 72 bp | GCCTCAGGGTGGGCAGTAAAGCTAGGGCTGGATTCCTaGCTCGGGGAGTCGCTAGCTTCTTCCTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASGWAVKLGLDS*LGESLASSSSF Trigger: GAAAGAGGAGGAAGAAGCTAGCGACTCCCCGAGCCAGGAATCCAGCCCTAGCTTTACTGCCCACCCTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS TCA 72 bp | TCCACTCCTGGCTCCCATCCTCTCCTGTCCAGCAGTTaGGTCATATCCTCCACCAGAACGGCAGCCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: STPGSHPLLSSS*VISSTRTAASF Trigger: AAAGGAGGCTGCCGTTCTGGTGGAGGATATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | TTCCACTCCTGGCTCCCATCCTCTCCTGTCCAGCAGTaGAGTCATATCCTCCACCAGAACGGCAGCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FHSWLPSSPVQQ*SHILHQNGSLL Trigger: AAGGAGGCTGCCGTTCTGGTGGAGGATATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 90 bp | CTCTTCACGTTCCACTCCTGGCTCCCATCCTCTCCTGTCCAGCAGTaGAGTCATATCCTCCACCAGAACGGCAGCCTCCTTTCCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: LFTFHSWLPSSPVQQ*SHILHQNGSLLSTL Trigger: AAGAGTGGAAAGGAGGCTGCCGTTCTGGTGGAGGATATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CCA 72 bp | GCTCTGTTTGCAACTTGCCTCTTCACGTTCCACTCCTaGCTCCCATCCTCTCCTGTCCAGCAGTTGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: ALFATCLFTFHS*LPSSPVQQLSH Trigger: ATGACTCAACTGCTGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 90 bp | TCCTCTGAAGAAGCCTTGTCTTGGGAAGGGAAGTTGGGCCACATGTaGGAACCGTTTCCTGAGGTGTTAGACTCATGGCCAGGCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSEEALSWEGKLGHM*EPFPEVLDSWPGWS Trigger: AGACCAGCCTGGCCATGAGTCTAACACCTCAGGAAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS GCA 72 bp | GGGGTGCTTCGAGTCACGGTGATATGGATCTTTAGGTaGACCATGAGAGCTGAGCTGCGGCTAAAAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GVLRVTVIWIFR*TMRAELRLKAF Trigger: GAAAGCTTTTAGCCGCAGCTCAGCTCTCATGGTGCACCTAAAGATCCATATCACCGTGACTCGAAGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CCA 72 bp | CAGAGTGCTCCTAGGAATTCTGGCTGGCTCTCTGAGTaGCTCTCAGGTTTACAAGTGTGGGCAAGGGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: QSAPRNSGWLSE*LSGLQVWARVD Trigger: ATCTACCCTTGCCCACACTTGTAAACCTGAGAGCCACTCAGAGAGCCAGCCAGAATTCCTAGGAGCACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | GAAGCCTTGTCTTGGGAAGGGAAGTTGGGCCACATGTaGGAACCGTTTCCTGAGGTGTTAGACTCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EALSWEGKLGHM*EPFPEVLDSWP Trigger: TGGCCATGAGTCTAACACCTCAGGAAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CAA 90 bp | CCATTTTTGGTGGCTCCAATTCATCTGTATTGCTCTGTTTGCAACTaGCCTCTTCACGTTCCACTCCTGGCTCCCATCCTCTCCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PFLVAPIHLYCSVCN*PLHVPLLAPILSCP Trigger: TGGACAGGAGAGGATGGGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS GCA 72 bp | TGGCTCCAATTCATCTGTATTGCTCTGTTTGCAACTTaGCTCTTCACGTTCCACTCCTGGCTCCCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: WLQFICIALFAT*LFTFHSWLPSS Trigger: AGAGGATGGGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | TTCTCCTCTGAAGAAGCCTTGTCTTGGGAAGGGAAGTaGGGCCACATGTTGGAACCGTTTCCTGAGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FSSEEALSWEGK*GHMLEPFPEVL Trigger: TAACACCTCAGGAAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CCA 72 bp | GCTCTCAGGTTTACAAGTGTGGGCAAGGGTAGATTTTaGCAAAACGCTTCCCATGACAGTTTCAGTCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ALRFTSVGKGRF*QNASHDSFSRH Trigger: ATGGCGACTGAAACTGTCATGGGAAGCGTTTTGCCAAAATCTACCCTTGCCCACACTTGTAAACCTGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CCA 72 bp | AATGGGCCAAATTTCTCCTCTGAAGAAGCCTTGTCTTaGGAAGGGAAGTTGGGCCACATGTTGGAACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: NGPNFSSEEALS*EGKLGHMLEPF Trigger: AAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGCCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CAA 90 bp | ATGACAGTTTCAGTCGCCATTTTTGGTGGCTCCAATTCATCTGTATaGCTCTGTTTGCAACTTGCCTCTTCACGTTCCACTCCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MTVSVAIFGGSNSSV*LCLQLASSRSTPGS Trigger: GGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAATGGCGACTGAAACTGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 90 bp | GTCTCATTATCAAGTAATGGGCCAAATTTCTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTGGGCCACATGTTGGAACCGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSLSSNGPNFSSEEA*SWEGKLGHMLEPFP Trigger: AGGAAACGGTTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGCCCATTACTTGATAATGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS TCA 72 bp | CTTCTGAGAGTGGCTCTTCTGGTGGGCCTCCAGAGCTaGAGTGTTCTGGAATGTTTTCAAACATTCACTATC | + |
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Preference number: 6 (lower is better) Translates to: LLRVALLVGLQS*SVLECFQTFTI Trigger: GATAGTGAATGTTTGAAAACATTCCAGAACACTTCAGCTCTGGAGGCCCACCAGAAGAGCCACTCTCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | ATTTTTGGTGGCTCCAATTCATCTGTATTGCTCTGTTaGCAACTTGCCTCTTCACGTTCCACTCCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFGGSNSSVLLC*QLASSRSTPGS Trigger: GGAGCCAGGAGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | TCAAGTAATGGGCCAAATTTCTCCTCTGAAGAAGCCTaGTCTTGGGAAGGGAAGTTGGGCCACATGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSNGPNFSSEEA*SWEGKLGHMLE Trigger: TTCCAACATGTGGCCCAACTTCCCTTCCCAAGACAAGGCTTCTTCAGAGGAGAAATTTGGCCCATTACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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| CDS CAA 72 bp | TCAGTCGCCATTTTTGGTGGCTCCAATTCATCTGTATaGCTCTGTTTGCAACTTGCCTCTTCACGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SVAIFGGSNSSV*LCLQLASSRST Trigger: AGTGGAACGTGAAGAGGCAAGTTGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAATGGCGACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS CCA 72 bp | CAAAACGCTTCCCATGACAGTTTCAGTCGCCATTTTTaGTGGCTCCAATTCATCTGTATTGCTCTGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QNASHDSFSRHF*WLQFICIALFA Trigger: TGCAAACAGAGCAATACAGATGAATTGGAGCCACCAAAAATGGCGACTGAAACTGTCATGGGAAGCGTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055528.11 ENSMUST00000120809.2 |
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| CDS TCA 72 bp | TTTCAAACATTCACTATCCTTGGAGGATTTCTTCTCTaGGCAAGTATCTGGAGGCACTGTCTCATTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: FQTFTILGGFLL*ASIWRHCLIIK Trigger: CTTGATAATGAGACAGTGCCTCCAGATACTTGCTCAGAGAAGAAATCCTCCAAGGATAGTGAATGTTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055528.11 ENSMUST00000117189.2 ENSMUST00000119989.3 ENSMUST00000120809.2 |
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