Pregenerated sensors for ZSCAN20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061894Ensembl transcript IDs: ENSMUST00000097877.9, ENSMUST00000135309.2
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGTGCACGCCTGCAATACGGCTCTGGAGCAGAGCTGGGCCCCCTaGAATCCTGGGCCCCTGAAGAGACTCCTCGGCGGCCAGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PVHACNTALEQSWAP*NPGPLKRLLGGQAR Trigger: TCTGGCCTGGCCGCCGAGGAGTCTCTTCAGGGGCCCAGGATTGCAGGGGGCCCAGCTCTGCTCCAGAGCCGTATTGCAGGCGTGCACTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR GCA 90 bp | TCCATCTCACCCCAGGCCTCTTGGTCATCAGCCTCAGTACTGCTCTaGCCAGATCCAGGGAGGCCTGTGGCTTCTCCTACCATCTCCACG | + |
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Preference number: 1 (lower is better) Translates to: SISPQASWSSASVLL*PDPGRPVASPTIST Trigger: CGTGGAGATGGTAGGAGAAGCCACAGGCCTCCCTGGATCTGGGCAGAGCAGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR GCA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATaGCACCCTCCCACCATCCCAGTCCCTTACCCCAGGATACAAACC | + |
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Preference number: 1 (lower is better) Translates to: AAPRMTLSQHLCNPR*HPPTIPVPYPRIQT Trigger: GGTTTGTATCCTGGGGTAAGGGACTGGGATGGTGGGAGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR GCA 90 bp | CATCTTCCATCTCACCCCAGGCCTCTTGGTCATCAGCCTCAGTACTaGTCTGCCCAGATCCAGGGAGGCCTGTGGCTTCTCCTACCATCT | + |
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Preference number: 1 (lower is better) Translates to: HLPSHPRPLGHQPQY*SAQIQGGLWLLLPS Trigger: AGATGGTAGGAGAAGCCACAGGCCTCCCTGGATCTGGGCAGAGCAGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAGATGGAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR CCA 90 bp | AGAAGTCTAACGGCGTCCTCATCTTCCATCTCACCCCAGGCCTCTTaGTCATCAGCCTCAGTACTGCTCTGCCCAGATCCAGGGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RSLTASSSSISPQAS*SSASVLLCPDPGRP Trigger: AGGCCTCCCTGGATCTGGGCAGAGCAGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAGATGGAAGATGAGGACGCCGTTAGACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR CCA 90 bp | TCTGCAATGATCTCGCTGTGGCCCCACTTGCTGCTGACCTCAAGATaGGGTACCCCAGGCACTAGTTCCCAGTCTACACCTCCTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: SAMISLWPHLLLTSR*GTPGTSSQSTPPLT Trigger: AGTGAGAGGAGGTGTAGACTGGGAACTAGTGCCTGGGGTACCCCATCTTGAGGTCAGCAGCAAGTGGGGCCACAGCGAGATCATTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATaGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACC | + |
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Preference number: 1 (lower is better) Translates to: KAGETEHREVEFGKT*SPVPSHRYREAGLT Trigger: GGTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CCA 90 bp | ATGATAGACTTTGGCCAAAGTTCTCCCCGGGCTCATCCCGCTGGTTaGGAGGTCCTCCCAAGTGGACCCGCTGATGTTTCAGCAGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: MIDFGQSSPRAHPAG*EVLPSGPADVSAGL Trigger: CAAACCTGCTGAAACATCAGCGGGTCCACTTGGGAGGACCTCCCAACCAGCGGGATGAGCCCGGGGAGAACTTTGGCCAAAGTCTATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR TCA 90 bp | CCAACTTCTGAAAAGAAAGAGCTGAAGGCATTGCTGCACCCAGAATaGCCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: PTSEKKELKALLHPE*PCPSTCAIPDATLP Trigger: TGGGAGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTCTTTTCAGAAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CCA 90 bp | CCCTCATGTAAGAGGACTCAGGAGAGCACCCAGCCCCTCAGGCTCTaGGGACACACAAGTCTTGATGAATTGTGCCTCCTCCATTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: PSCKRTQESTQPLRL*GHTSLDELCLLHFL Trigger: TAGAAAATGGAGGAGGCACAATTCATCAAGACTTGTGTGTCCCCAGAGCCTGAGGGGCTGGGTGCTCTCCTGAGTCCTCTTACATGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CCA 90 bp | TGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTaGGAGTCTGGAGTCAGAAGTCTAACGGCGTCCTCATCTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: WSSSSRFNSNPASAG*ESGVRSLTASSSSI Trigger: GATGGAAGATGAGGACGCCGTTAGACTTCTGACTCCAGACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR TCA 90 bp | CCAGGGTATCCTACGTATCTTCTTACTGCAATAACTGACATTTGCTaGTCTTTAACCAGGGCTCACCCCATGACCCCTGATCCTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: PGYPTYLLTAITDIC*SLTRAHPMTPDPQR Trigger: TCTCTGAGGATCAGGGGTCATGGGGTGAGCCCTGGTTAAAGATCAGCAAATGTCAGTTATTGCAGTAAGAAGATACGTAGGATACCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR GCA 90 bp | GTATGCTGGGCCACGGATTCAACTCTAACCCCAATATCACCCATCTaGCTCAGACTAAGTTCTCAAGTGACAGCATTTGTAAAGACATCG | + |
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Preference number: 1 (lower is better) Translates to: VCWATDSTLTPISPI*LRLSSQVTAFVKTS Trigger: CGATGTCTTTACAAATGCTGTCACTTGAGAACTTAGTCTGAGGCAGATGGGTGATATTGGGGTTAGAGTTGAATCCGTGGCCCAGCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR GCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTaGTCTGAAATCTGGTCTTCTTCCTCACGCTTCAACTCAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: VVYLDKAPGKSPKTS*SEIWSSSSRFNSNP Trigger: AGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAGATTTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR TCA 90 bp | CCAGTCTACACCTCCTCTCACTGTGAGTTTTCAAGGTTTTCCCTGTaGGGATTTGCTCCAACTGCAAACTACCAAGAAGAACAAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: PVYTSSHCEFSRFSL*GFAPTANYQEEQEL Trigger: CAGTTCTTGTTCTTCTTGGTAGTTTGCAGTTGGAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGTAGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CCA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTaGGCGTGTGCAAACCAAATTACACTTGGAAGTACCTTCAAACCT | + |
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Preference number: 1 (lower is better) Translates to: SDSICKDIVRILCVY*ACANQITLGSTFKP Trigger: AGGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTGCACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR TCA 90 bp | GTGCAAACCAAATTACACTTGGAAGTACCTTCAAACCTTAGTCACTaGAATTCACTTCCAAATTACCCGGATTTTACAAAGATGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: VQTKLHLEVPSNLSH*NSLPNYPDFTKMAP Trigger: AGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGTGAATTTCAGTGACTAAGGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| 3UTR CAA 90 bp | CAGAAGTCTAACGGCGTCCTCATCTTCCATCTCACCCCAGGCCTCTaGGTCATCAGCCTCAGTACTGCTCTGCCCAGATCCAGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QKSNGVLIFHLTPGL*VISLSTALPRSREA Trigger: GGCCTCCCTGGATCTGGGCAGAGCAGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAGATGGAAGATGAGGACGCCGTTAGACTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTTGCAGGCTGGGAGTCTaGAGTCAGAAGTCTAACGGC | + |
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Preference number: 2 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVCRLGV*SQKSNG Trigger: GCCGTTAGACTTCTGACTCCAGACTCCCAGCCTGCA...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTCGAAGGGGGACTCACTaGGAATTGCCAGAAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVRRGTH*ELPERP Trigger: AGGTCTTTCTGGCAATTCTCAGTGAGTCCCCCTTCG...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCGGCCCCCTGCAATCCTaGGCCCCTGAAGAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LVFFLTLQLKSCICRLGVGPLQS*APEETP Trigger: AGGAGTCTCTTCAGGGGCCCAGGATTGCAGGGGGCC...GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTGAAGCAGGACTGACCTaGGAAAGGACTCTTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: AAPRMTLSQHLCNPRCHPEAGLT*ERTLQP Trigger: GGGTTGAAGAGTCCTTTCTCAGGTCAGTCCTGCTTC...AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTAGACATGGTCACCTGTaGCCAGCCACAGGTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLRHGHL*PATGTE Trigger: CTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCT...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | ACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCAGAGCTGGGCCCCCTaGAATCCTGGGCCCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: THYCFCQEEEEVLPTTLSQSWAP*NPGPLK Trigger: CTTCAGGGGCCCAGGATTGCAGGGGGCCCAGCTCTG...GGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | ACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCCTGCAATACGGCTCTaGAGCAGAGCTGGGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: THYCFCQEEEEVLPTTLSPAIRL*SRAGPP Trigger: AGGGGGCCCAGCTCTGCTCCAGAGCCGTATTGCAGG...GGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTGCTTCTCCCCGGAGTTaGGGTGACAGGCTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RYTLLLLSGGGGGVAYNAASPRS*GDRLQE Trigger: CTCCTGGAGCCTGTCACCCCAACTCCGGGGAGAAGC...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTAGGTACAGGCCTTGGTaGTCAATGAGTTTTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVRYRPW*SMSFSK Trigger: CTTAGAAAAACTCATTGACCACCAAGGCCTGTACCT...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACTGTGTATTGGGCGTGTaGAAACCAAATTACACTTGG | + |
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Preference number: 2 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDCVLGV*KPNYTW Trigger: CCAAGTGTAATTTGGTTTGCACACGCCCAATACACA...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTAGTCTTGATGAATTGTaGCTCCTCCATTTTCTACGC | + |
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Preference number: 2 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLSLDEL*LLHFLR Trigger: GCGTAGAAAATGGAGGAGGCACAATTCATCAAGACT...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTCCAAATCCTCTCACCTaGAGGAACTCTCAACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KAGETEHREVEFGKTWSPPNPLT*RNSQLL Trigger: CAGAAGTTGAGAGTTCCTGCAGGTGAGAGGATTTGG...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCACTCTTCCCATGTGTTCCTCCACTCCCCTTCATTTCCGTTCACATGGTCTTCAACTCAAATCCTaGATCTGCAGGCTGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: RSTLPMCSSTPLHFRSHGLQLKS*ICRLGV Trigger: GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAG...ACCATGTGAACGGAAATGAAGGGGAGTGGAGGAACACATGGGAAGAGTGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAGCAATGATCTCGCTGTaGCCCCACTTGCTGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: TSFRGDSNQELPPTFSHTAMISL*PHLLLT Trigger: GGTCAGCAGCAAGTGGGGCCACAGCGAGATCATTGC...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTCCTGTAGCTTCGAAGAAGGTTCTTGAATCGGTAGCGGCATTGTTCCAGCAGCTCCCTTCGTCTTaGTCATCCATCTCAGTGTCG | + |
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Preference number: 2 (lower is better) Translates to: GFPVASKKVLESVAALFQQLPSS*SSISVS Trigger: CGACACTGAGATGGATGACCAAGACGAAGGGAGCTG...CTGGAACAATGCCGCTACCGATTCAAGAACCTTCTTCGAAGCTACAGGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTCCTGCATCTGCAGGCTaGGAGTCTGGAGTCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RYTLLLLSGGGGGVAYNAPASAG*ESGVRS Trigger: ACTTCTGACTCCAGACTCCCAGCCTGCAGATGCAGG...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAACCGAGCCCTCATCAGTaGGTCCATCTCCTCATAGAA | + |
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Preference number: 2 (lower is better) Translates to: VVYLDKAPGKSPKTSCSEPSPHQ*VHLLIE Trigger: TTCTATGAGGAGATGGACTCACTGATGAGGGCTCGG...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTATAGATACACATTATTaGTTCTGTCAGGAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLIDTHY*FCQEEE Trigger: CTCCTCCTCCTGACAGAAGCAATAATGTGTATCTAT...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCTTCCCTGTGAGGATTTaGTCCAACTGCAAACTACCA | + |
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Preference number: 2 (lower is better) Translates to: GQSATNKKSTVYGPPCRSFPVRI*SNCKLP Trigger: TGGTAGTTTGCAGTTGGAGCAAATCCTCACAGGGAA...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCCTATGGAGGCCAAAGTaGTACAAACAAGAAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ERAEGIAAPRMTLSQHLCLWRPK*YKQEKH Trigger: GTGCTTTTCTTGTTTGTAGCACTTTGGCCTCCATAG...GCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAGAGTTTGGGAAGACATaGTCACCTGTGCCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TSFRGDSNQELPPTFSHTEFGKT*SPVPSH Trigger: GTGGCTGGGCACAGGTGACCATGTCTTCCCAAACTC...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCTCCTCAGAGGAGCACTCTTCCCATGTGTTCCTCCACTCCCCTTCATTTTCCTGCTCTGAAATCTaGTCTTCTTCCTCACGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KSSSEEHSSHVFLHSPSFSCSEI*SSSSRF Trigger: GAAGCGTGAGGAAGAAGACCAGATTTCAGAGCAGGA...AAATGAAGGGGAGTGGAGGAACACATGGGAAGAGTGCTCCTCTGAGGAGGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAATGAAGAAACTGAGCCAGAGAGACCAAAAGGCAGGCGAGACTGAGCACCACCTCCTCTCACTGTaGGTTTTCAAGGTTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LEMKKLSQRDQKAGETEHHLLSL*VFKVFP Trigger: AGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTG...GTGCTCAGTCTCGCCTGCCTTTTGGTCTCTCTGGCTCAGTTTCTTCATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAAATCTGGCTGTTTTGGTaGCAGGTGCGAAGCTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: VVYLDKAPGKSPKTSCSEIWLFW*QVRSFS Trigger: CGAAAAGCTTCGCACCTGTCACCAAAACAGCCAGAT...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR GCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTGTTTTGGTGACAGGTaGGAAGCTTTTCGGCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RYTLLLLSGGGGGVAYNACFGDR*EAFRRR Trigger: CCTTCGCCGAAAAGCTTCGCACCTGTCACCAAAACA...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAAGTGGACAGCTGCTCTTaGCTTTCCTGTAGCTTCGAA | + |
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Preference number: 2 (lower is better) Translates to: VVYLDKAPGKSPKTSCSEVDSCS*LSCSFE Trigger: TTCGAAGCTACAGGAAAGCCAAGAGCAGCTGTCCAC...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR CAA 90 bp | AAACCTGGGCCTCTACCTTCACCTAGAACCCAGGTCTTTCATACCTaGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCAGGACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: KPGPLPSPRTQVFHT*VTFSRMFFSPSGPF Trigger: GAAGGGTCCTGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGGTGAAGGTAGAGGCCCAGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCATAGATACACATTATTaGTTCTGTCAGGAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LVFFLTLQLKSCICRLGVIDTHY*FCQEEE Trigger: CTCCTCCTCCTGACAGAAGCAATAATGTGTATCTAT...GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCACTGCTGACCTCAAGATaGGGTACCCCAGGCACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSLLTSR*GTPGTS Trigger: ACTAGTGCCTGGGGTACCCCATCTTGAGGTCAGCAG...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACACCTCTCTCACCCGTATaGCTCTATAAAGATGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TSFRGDSNQELPPTFSHTPLSPV*LYKDGD Trigger: GTCACCATCTTTATAGAGTCATACGGGTGAGAGAGG...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCATTCTATGTGTGTATTaGGCGTGTGCAAACCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LVFFLTLQLKSCICRLGVILCVY*ACANQI Trigger: AATTTGGTTTGCACACGCCCAATACACACATAGAAT...GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR CAA 90 bp | ACACCTCCTCTCACTGTGAGTTTTCAAGGTTTTCCCTGTGAGGATTaGCTCCAACTGCAAACTACCAAGAAGAACAAGAACTGGTTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: TPPLTVSFQGFPCED*LQLQTTKKNKNWFP Trigger: CGGAAACCAGTTCTTGTTCTTCTTGGTAGTTTGCAGTTGGAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR GCA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGAAGGATTTGCTCCAACTaGAAACTACCAAGAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRRICSN*KLPRRT Trigger: TGTTCTTCTTGGTAGTTTGCAGTTGGAGCAAATCCT...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAAATAATTCTATGTGTGTATTaGGCGTGTGCAAACCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: PLEGTAIKSFHLLSHIQIILCVY*ACANQI Trigger: AATTTGGTTTGCACACGCCCAATACACACATAGAAT...TATTTGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | GCCTGCAATACGGCTCTGGAGCAGAGCTGGGCCCCCTaGAATCCTGGGCCCCTGAAGAGACTCCTCGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: ACNTALEQSWAP*NPGPLKRLLGG Trigger: GCCGCCGAGGAGTCTCTTCAGGGGCCCAGGATTGCAGGGGGCCCAGCTCTGCTCCAGAGCCGTATTGCAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | GGAGGCCTGTGGCTTCTCCTACCATCTCCACGGCTCTaGTCACAGTCCGAGCCCTCATCAGTGAGTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: GGLWLLLPSPRL*SQSEPSSVSPS Trigger: AGATGGACTCACTGATGAGGGCTCGGACTGTGATCAGAGCCGTGGAGATGGTAGGAGAAGCCACAGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR GCA 72 bp | ATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTaGAATCCCAGATGCCACCCTCCCACCATCCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IAAPRMTLSQHL*NPRCHPPTIPV Trigger: GACTGGGATGGTGGGAGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | ATTGCCAGAAAGACCTTGGTCTCTTCGAAGCCCCAGTaGACGCCTGCAATACGGCTCTGGAGCAGAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IARKTLVSSKPQ*TPAIRLWSRAG Trigger: CCCAGCTCTGCTCCAGAGCCGTATTGCAGGCGTGCACTGGGGCTTCGAAGAGACCAAGGTCTTTCTGGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTTCGCTGTGGCCCCACTaGCTGCTGACCTCAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KAGETEHREVEFGKTWSPSLWPH*LLTSRW Trigger: CCATCTTGAGGTCAGCAGCAAGTGGGGCCACAGCGA...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | CACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTaGCTACAACGCTTTCCCTCCCGCGTGGGTTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: HIIASVRRRRRC*LQRFPSRVGSA Trigger: CGCAGAACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR CCA 72 bp | AAGAGGACTCAGGAGAGCACCCAGCCCCTCAGGCTCTaGGGACACACAAGTCTTGATGAATTGTGCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KRTQESTQPLRL*GHTSLDELCLL Trigger: GAGGAGGCACAATTCATCAAGACTTGTGTGTCCCCAGAGCCTGAGGGGCTGGGTGCTCTCCTGAGTCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTAAGTGGGAGCTGTTGTaGAAGTCTTTGCCGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVKWELL*KSLPHS Trigger: AGAATGCGGCAAAGACTTCAACAACAGCTCCCACTT...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | TCCCGCTGGTTGGGAGGTCCTCCCAAGTGGACCCGCTaGTGTTTCAGCAGGTTTGAGCTCTGGTTAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRWLGGPPKWTR*CFSRFELWLKL Trigger: AAGCTTTAACCAGAGCTCAAACCTGCTGAAACATCAGCGGGTCCACTTGGGAGGACCTCCCAACCAGCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCCTCCTCAGAGGAGCACTCTTCCCATGTGTTCCTCCACTCCCCTTCATTTCTCACCCCAGGCCTCTaGGTCATCAGCCTCAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: KSSSEEHSSHVFLHSPSFLTPGL*VISLST Trigger: AGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAG...AAATGAAGGGGAGTGGAGGAACACATGGGAAGAGTGCTCCTCTGAGGAGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR CCA 72 bp | GAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATaGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ETEHREVEFGKT*SPVPSHRYREA Trigger: TGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR TCA 72 bp | GAAAAGAAAGAGCTGAAGGCATTGCTGCACCCAGAATaGCCTTGTCCCAGCACCTGTGCAATCCCAGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: EKKELKALLHPE*PCPSTCAIPDA Trigger: GGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | GTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTaGAGGCTGGGAGTCTGGAGTCAGAAGTCTAACGGC | + |
|
Preference number: 3 (lower is better) Translates to: VFFLTLQLKSCI*RLGVWSQKSNG Trigger: GCCGTTAGACTTCTGACTCCAGACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCTGTGGCTTCTCCTACCATCTCCACGGCTCTGATCACAGTCCGAGCCCTGAGTGTTTTAGGAACTaGAGAGGCATAGATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: EACGFSYHLHGSDHSPSPECFRN*RGIDTH Trigger: ATGTGTATCTATGCCTCTCAAGTTCCTAAAACACTC...AGGGCTCGGACTGTGATCAGAGCCGTGGAGATGGTAGGAGAAGCCACAGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | CAGGCTCCAGGAGAGTCGGCACCCATGCTGATATTCTaGGGTTCTTTAGGTCCCTCCTGTGTAGAATTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: QAPGESAPMLIF*GSLGPSCVEFR Trigger: ACGAAATTCTACACAGGAGGGACCTAAAGAACCTCAGAATATCAGCATGGGTGCCGACTCTCCTGGAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR CCA 72 bp | CTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCTaGAGTCAGAAGTCTAACGGCGTCCTCATCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQLKSCICRLGV*SQKSNGVLIFH Trigger: ATGGAAGATGAGGACGCCGTTAGACTTCTGACTCCAGACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | CAGGCACTAGTTCCCAGTCTACACCTCCTCTCACTGTaGGTTTTCAAGGTTTTCCCTGTGAGGATTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QALVPSLHLLSL*VFKVFPVRICS Trigger: GGAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGTAGACTGGGAACTAGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | CTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTaGTCTGAAATCTGGTCTTCTTCCTCACGCTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LDKAPGKSPKTS*SEIWSSSSRFN Trigger: GTTGAAGCGTGAGGAAGAAGACCAGATTTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCCAGGTCTTTCATACCTaGGTAACTTTCTCTAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: ERAEGIAAPRMTLSQHLCQVFHT*VTFSRM Trigger: CATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTG...GCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR CCA 72 bp | CCAGGCAAATCCCCCAAAACATCCTGCTCTGAAATCTaGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PGKSPKTSCSEI*SSSSRFNSNPA Trigger: TGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAGATTTCAGAGCAGGATGTTTTGGGGGATTTGCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAACAGGGAAGTTGAGTTaGGGAAGACATGGTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSFRGDSNQELPPTFSHTTGKLS*GRHGHL Trigger: CAGGTGACCATGTCTTCCCAAACTCAACTTCCCTGT...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTGTGAGGTACAGGCCTaGGTGGTCAATGAGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RYTLLLLSGGGGGVAYNACEVQA*VVNEFF Trigger: GAAAAACTCATTGACCACCAAGGCCTGTACCTCACA...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR CCA 72 bp | ATTTCTATTAGTAATGATTCTGCAATGATCTCGCTGTaGCCCCACTTGCTGCTGACCTCAAGATGGGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: ISISNDSAMISL*PHLLLTSRWGT Trigger: GGTACCCCATCTTGAGGTCAGCAGCAAGTGGGGCCACAGCGAGATCATTGCAGAATCATTACTAATAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAAATGAAGAAACTGAGCCAGAGAGACCAAAAGGCAGGCGAGACTGAGCACGAGTGTTTTAGGAACTaGAGAGGCATAGATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LEMKKLSQRDQKAGETEHECFRN*RGIDTH Trigger: ATGTGTATCTATGCCTCTCAAGTTCCTAAAACACTC...GTGCTCAGTCTCGCCTGCCTTTTGGTCTCTCTGGCTCAGTTTCTTCATTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAAGATTCTATGTGTGTATaGGGCGTGTGCAAACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVYLDKAPGKSPKTSCSEDSMCV*GVCKPN Trigger: ATTTGGTTTGCACACGCCCAATACACACATAGAATC...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | CCCAGGGTATCCTACGTATCTTCTTACTGCAATAACTaGCATTTGCTGATCTTTAACCAGGGCTCACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PRVSYVSSYCNN*HLLIFNQGSPH Trigger: ATGGGGTGAGCCCTGGTTAAAGATCAGCAAATGTCAGTTATTGCAGTAAGAAGATACGTAGGATACCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCTGAGCACAGGGAAGTaGAGTTTGGGAAGACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSLSTGK*SLGRHG Trigger: ACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAG...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR TCA 72 bp | ATTGTGCCTCCTCCATTTTCTACGCTGGGACTACTTTaGGGATTAAATGAGATGTTACATAAGGCGCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IVPPPFSTLGLL*GLNEMLHKALG Trigger: GCCAAGCGCCTTATGTAACATCTCATTTAATCCTCAAAGTAGTCCCAGCGTAGAAAATGGAGGAGGCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | TGTTTTAGGAACTTGAGAGGCATAGATACACATTATTaGTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CFRNLRGIDTHY*FCQEEEEVLPT Trigger: TGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCTATGCCTCTCAAGTTCCTAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACCCTTCCTTTCAGACCCAGGGTATCCTACGTATCTTCTTACTGCAATAACACAAGTCTTGATGAATaGTGCCTCCTCCATTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RTLPFRPRVSYVSSYCNNTSLDE*CLLHFL Trigger: TAGAAAATGGAGGAGGCACAATTCATCAAGACTTGT...GTTATTGCAGTAAGAAGATACGTAGGATACCCTGGGTCTGAAAGGAAGGGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCAGATTCTATGTGTGTATaGGGCGTGTGCAAACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSDSMCV*GVCKPN Trigger: ATTTGGTTTGCACACGCCCAATACACACATAGAATC...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR GCA 72 bp | AGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTaGAAACCAAATTACACTTGGAAGTACCTTCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RHRKDSMCVLGV*KPNYTWKYLQT Trigger: GGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTGCACACGCCCAATACACACATAGAATCCTTACGATGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCACAAACCAAATTACACTaGGAAGTACCTTCAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSQTKLH*EVPSNL Trigger: AAGGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTG...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR CCA 72 bp | ATGTGTGTATTGGGCGTGTGCAAACCAAATTACACTTaGAAGTACCTTCAAACCTTAGTCACTGAAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: MCVLGVCKPNYT*KYLQTLVTEIH Trigger: GTGAATTTCAGTGACTAAGGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTGCACACGCCCAATACACACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| 3UTR TCA 72 bp | AAATTACACTTGGAAGTACCTTCAAACCTTAGTCACTaGAATTCACTTCCAAATTACCCGGATTTTACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLHLEVPSNLSH*NSLPNYPDFTK Trigger: CTTTGTAAAATCCGGGTAATTTGGAAGTGAATTTCAGTGACTAAGGTTTGAAGGTACTTCCAAGTGTAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCGGCGGCCAGGCCAGAACCACTGCAGTCTTCCACGGTCTCCTCGGGCTCCCCACGATCACCTCCTaGGGGGTCCTGGCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGGQARTTAVFHGLLGLPTITS*GVLAGL Trigger: GAGCCCTGCCAGGACCCCGCAGGAGGTGATCGTGGG...GAGCCCGAGGAGACCGTGGAAGACTGCAGTGGTTCTGGCCTGGCCGCCGAGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCGGCGGCCAGGCCAGAACCACTGCAGTCTTCCACGGTCTCCTCGGGCTCCCGTGGGTCACTGGCTaGAGCTGGAACCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGGQARTTAVFHGLLGLPWVTG*SWNLWN Trigger: GTTCCAGAGGTTCCAGCTGCAGCCAGTGACCCACGG...GAGCCCGAGGAGACCGTGGAAGACTGCAGTGGTTCTGGCCTGGCCGCCGAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTTGGCTGAAGGCCTCATaGGGTCCAGCTGCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVWLKAS*GPAASR Trigger: CCGGGATGCAGCTGGACCCCATGAGGCCTTCAGCCA...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGCCCCAGTGCACGCCTGCAATACGGCTCTGGAGCAGAGCTGGGCCCCCTGCATCTTTGGAACAGTTaGGGCTTGGGGTGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPSARLQYGSGAELGPLHLWNS*GLGCED Trigger: GTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATG...CAGGGGGCCCAGCTCTGCTCCAGAGCCGTATTGCAGGCGTGCACTGGGGCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTGCCTGCACCCAGGTCTaGACCTCCCTGGGTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVACTQV*TSLGKM Trigger: CATCTTACCCAGGGAGGTGCAGACCTGGGTGCAGGC...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCCCCACGATCACCTCCTaGGGGGTCCTGGCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSPTITS*GVLAGL Trigger: GAGCCCTGCCAGGACCCCGCAGGAGGTGATCGTGGG...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCCAGAGCTGGGCCCCCTaGAATCCTGGGCCCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERAEGIAAPRMTLSQHLCQSWAP*NPGPLK Trigger: CTTCAGGGGCCCAGGATTGCAGGGGGCCCAGCTCTG...GCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTCCCGCGTGGGTTGGAACAGTTGGGGCTTaGGGTGTGAGGACAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGGGGGVAYNAFPPAWVGTVGA*GVRTAL Trigger: GAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCC...AACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACGAAGGGGCAGGTCCCTaGCGGATGGCTGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDEGAGP*RMAVLG Trigger: GCCAAGAACAGCCATCCGCCAGGGACCTGCCCCTTC...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACGCCTGCACCCAGGTCTaGACCTCCCTGGGTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDACTQV*TSLGKM Trigger: CATCTTACCCAGGGAGGTGCAGACCTGGGTGCAGGC...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCTCGGGGTGTCGTGCCTaGACCCAGGTCTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSSGCRA*TQVCTS Trigger: GGAGGTGCAGACCTGGGTGCAGGCACGACACCCCGA...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | GCTTCTCCTACCATCTCCACGGCTCTGATCACAGTCCGAGCCCTCATCAGTGAGAGAGCCGTGGGTCACTaGCTGCAGCTGGAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASPTISTALITVRALISERAVGH*LQLEPL Trigger: CAGAGGTTCCAGCTGCAGCCAGTGACCCACGGCTCT...CTCACTGATGAGGGCTCGGACTGTGATCAGAGCCGTGGAGATGGTAGGAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTTGGCCCTCAGAGCCGTaGGTCACTGGCTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGETEHREVEFGKTWSPWPSEP*VTGCSW Trigger: CCAGCTGCAGCCAGTGACCCACGGCTCTGAGGGCCA...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AGGAGCACTCTTCCCATGTGTTCCTCCACTCCCCTTCATTTCCGTTCACATGGTCCAGGGACGGGGCTGTaGCTCTCCTTCTCGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLPMCSSTPLHFRSHGPGTGL*LSFSGL Trigger: CAGACCCGAGAAGGAGAGCCACAGCCCCGTCCCTGG...ACCATGTGAACGGAAATGAAGGGGAGTGGAGGAACACATGGGAAGAGTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCTGGCTGAAGGCCTCATaGGGTCCAGCTGCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSWLKAS*GPAASR Trigger: CCGGGATGCAGCTGGACCCCATGAGGCCTTCAGCCA...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AGGAGCACTCTTCCCATGTGTTCCTCCACTCCCCTTCATTTCCGTTCACATGGTTGGCCCTCAGAGCCGTaGGTCACTGGCTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLPMCSSTPLHFRSHGWPSEP*VTGCSW Trigger: CCAGCTGCAGCCAGTGACCCACGGCTCTGAGGGCCA...ACCATGTGAACGGAAATGAAGGGGAGTGGAGGAACACATGGGAAGAGTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | CCAAGAAGAACAAGAACTGGTTTCCGTGGGAAGGGTAGCGAAGGCACAGAAAGATCCTCCGCACCCCATTaGCACGGCTCTCCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRTRTGFRGKGSEGTERSSAPH*HGSPQA Trigger: GGCCTGGGGAGAGCCGTGCCAATGGGGTGCGGAGGA...TCTTTCTGTGCCTTCGCTACCCTTCCCACGGAAACCAGTTCTTGTTCTTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTTGCAGGCTGGGAGTCTaGAGTCAGAAGTCTAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRMTLSQHLCNPRCHPCRLGV*SQKSNG Trigger: GCCGTTAGACTTCTGACTCCAGACTCCCAGCCTGCA...AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCCCGTGGGTCACTGGCTaGAGCTGGAACCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSPWVTG*SWNLWN Trigger: GTTCCAGAGGTTCCAGCTGCAGCCAGTGACCCACGG...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCGGGTTTCCTGGGACTTaGCTGCCACCTCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAEGIAAPRMTLSQHLCGFPGT*LPPPNL Trigger: GAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCC...GCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCGCCTCAGTACTGCTCTaGCCAGATCCAGGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSASVLL*PDPGRP Trigger: AGGCCTCCCTGGATCTGGGCAGAGCAGTACTGAGGC...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCGGCAGGGCTCCTTCTTaGCTTGTCTACTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVFFLTLQLKSCICRLGVGRAPS*LVYWGS Trigger: CGAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCC...GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| 3UTR CAA 72 bp | GAGACCAAAAGGCAGGCGAGACTGAGCACAGGGAAGTaGAGTTTGGGAAGACATGGTCACCTGTGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETKRQARLSTGK*SLGRHGHLCPA Trigger: GGCTGGGCACAGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTTTTGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACACTCTCCCCAGGCCCTTaGGTCTGCCTGGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFRGDSNQELPPTFSHTLSPGP*VCLGHC Trigger: GCAGTGGCCCAGGCAGACTCAAGGGCCTGGGGAGAG...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | CCAAGAAGAACAAGAACTGGTTTCCGTGGGAAGGGTAGCGAAGGCACAGAAAGAGCTTGGAACGCTCGCTaGAGCACTTCCCGCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRRTRTGFRGKGSEGTERAWNAR*STSRSP Trigger: CGGACTGCGGGAAGTGCTTCAGCGAGCGTTCCAAGC...TCTTTCTGTGCCTTCGCTACCCTTCCCACGGAAACCAGTTCTTGTTCTTCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAATCGGGGTGTCGTGCCTaGACCCAGGTCTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVYLDKAPGKSPKTSCSESGCRA*TQVCTS Trigger: GGAGGTGCAGACCTGGGTGCAGGCACGACACCCCGA...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR GCA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGAGCCCAGGCCTCTCGGTaGCAATCCTCCACCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRAQASR*QSSTRA Trigger: GGCCCTGGTGGAGGATTGGCACCGAGAGGCCTGGGC...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | CTGGTCTTCTTCCTCACGCTTCAACTCAAATCCTGCATCTGCAGGCTGGGAGTCGGGTTTCCTGGGACTTaGCTGCCACCTCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVFFLTLQLKSCICRLGVGFPGT*LPPPNL Trigger: GAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCC...GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAGCGTGAGGAAGAAGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACCATCTTTGGAACAGTTaGGGCTTGGGGTGTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDHLWNS*GLGCED Trigger: GTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATG...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTCCTCCTGCGGGGTCCTaGCAGGGCTCCTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYTLLLLSGGGGGVAYNAPPAGS*QGSFLA Trigger: AGCCAAGAAGGAGCCCTGCCAGGACCCCGCAGGAGG...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTCAGCTCCCTTCGTCTTaGTCATCCATCTCAGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLQLPSS*SSISVS Trigger: CGACACTGAGATGGATGACCAAGACGAAGGGAGCTG...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCAAGAAGAACAAGAACTGGTTTCCGTGGGAAGGGTAGCGAAGGCACAGAAAGAGCTTCTCCCCGGAGTTaGGGTGACAGGCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRTRTGFRGKGSEGTERASPRS*GDRLQE Trigger: CTCCTGGAGCCTGTCACCCCAACTCCGGGGAGAAGC...TCTTTCTGTGCCTTCGCTACCCTTCCCACGGAAACCAGTTCTTGTTCTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CAA 72 bp | AAAAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTaGGGAAGACATGGTCACCTGTGCCCAGCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRQARLSTGKLS*GRHGHLCPATG Trigger: ACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CAA 72 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTaGTCCCAGCACCTGTGCAATCCCAGATGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERAEGIAAPRMT*SQHLCNPRCHP Trigger: AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CAA 72 bp | ACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTaGCCTACAACGCTTTCCCTCCCGCGTGGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THYCFCQEEEEV*PTTLSLPRGFC Trigger: GCAGAACCCACGCGGGAGGGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR TCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCTTGGGGCTTGGGGTGTaGGGACAGCACTCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSLGLGV*GQHSLS Trigger: TGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAA...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGATCCCCGGAGTTGGGGTaGCAGGCTCCAGGAGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRSPELG*QAPGES Trigger: CGACTCTCCTGGAGCCTGTCACCCCAACTCCGGGGA...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTACCTGGCGGTTCTGGTaGCAGGTCTGGAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RYTLLLLSGGGGGVAYNATWRFW*QVWSQA Trigger: TGCCTGGCTCCAGACCTGTCACCAGAACCGCCAGGT...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACCCTCCCAATCTCCAATaGTCGCCATCTTTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDPPNLQ*SPSLEQ Trigger: CTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGG...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACCTTCAACTCAAATCCTaGATCTGCAGGCTGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDLQLKS*ICRLGV Trigger: GACTCCCAGCCTGCAGATGCAGGATTTGAGTTGAAG...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACACCTCCTGCGGGGTCCTaGCAGGGCTCCTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSFRGDSNQELPPTFSHTPPAGS*QGSFLA Trigger: AGCCAAGAAGGAGCCCTGCCAGGACCCCGCAGGAGG...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGAGCCCTTGAGTCTGCCTaGGCCACTGCCTGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRALESA*ATACTG Trigger: GCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGC...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTGCGGATGGCTGTTCTTaGCTTTCCGGTAGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGETEHREVEFGKTWSPADGCS*LSGSSG Trigger: TCCGGAACTACCGGAAAGCCAAGAACAGCCATCCGC...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTTCCTGCTCTGAAATCTaGTCTTCTTCCTCACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRMTLSQHLCNPRCHPSCSEI*SSSSRF Trigger: GAAGCGTGAGGAAGAAGACCAGATTTCAGAGCAGGA...AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | GTGACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATGCCCCAGTGAACACCTaGCACCTTCATGTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSFRGDSNQELPPTFSHAPVNT*HLHVLR Trigger: GCGGAGGACATGAAGGTGTCAGGTGTTCACTGGGGC...ATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTCTCAAATCCTGCATCTaGAGGCTGGGAGTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGETEHREVEFGKTWSPLKSCI*RLGVWS Trigger: ACTCCAGACTCCCAGCCTGCAGATGCAGGATTTGAG...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGACATGGTCACCTGTGCCCAGCCACAGGTACAGAGAAGCAGGACTGACTGCGGGGCAAAGAAATaGACTTTCCGACTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEDMVTCAQPQVQRSRTDCGAKK*TFRLKL Trigger: AAGCTTCAGTCGGAAAGTGCATTTCTTTGCCCCGCA...GTCAGTCCTGCTTCTCTGTACCTGTGGCTGGGCACAGGTGACCATGTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTAGGTCTGCACCTCCCTaGGTAAGATGGACAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KAGETEHREVEFGKTWSPRSAPP*VRWTGT Trigger: AGTTCCTGTCCATCTTACCCAGGGAGGTGCAGACCT...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | TCTACACCTCCTCTCACTGTGAGTTTTCAAGGTTTTCCCTGTGAGGATTTGCTCCCTGCAATACGGCTCTaGAGCAGAGCTGGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STPPLTVSFQGFPCEDLLPAIRL*SRAGPP Trigger: AGGGGGCCCAGCTCTGCTCCAGAGCCGTATTGCAGG...GAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCCTGTAGCTTCGAAGAAGGTTCTTGAATCGGTAGCGGCATTGTTCCAGTTGGGGCTTGGGGTGTaGGGACAGCACTCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFPVASKKVLESVAALFQLGLGV*GQHSLS Trigger: TGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAA...CTGGAACAATGCCGCTACCGATTCAAGAACCTTCTTCGAAGCTACAGGAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGGCGAGACTGAGCACAGGGAAGTTGAGTTTGGGAAGACATGGTCACCTAGTGGGAGCTGTTGTTaGAGTCTTTGCCGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAGETEHREVEFGKTWSPSGSCC*SLCRIL Trigger: CAGAATGCGGCAAAGACTTCAACAACAGCTCCCACT...AGGTGACCATGTCTTCCCAAACTCAACTTCCCTGTGCTCAGTCTCGCCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | TCTACACCTCCTCTCACTGTGAGTTTTCAAGGTTTTCCCTGTGAGGATTTGCTCGTCTGCCTGGGCCACTaGCTGCACTGGCTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STPPLTVSFQGFPCEDLLVCLGH*LHWLVL Trigger: CAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGAC...GAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | TTGGAAATGAAGAAACTGAGCCAGAGAGACCAAAAGGCAGGCGAGACTGAGCACGGTCCTTGCTCTTGCTaGGAGGTGGCACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEMKKLSQRDQKAGETEHGPCSC*EVALGF Trigger: AAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACC...GTGCTCAGTCTCGCCTGCCTTTTGGTCTCTCTGGCTCAGTTTCTTCATTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTAGGTACAGGCCTTGGTaGTCAATGAGTTTTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAPRMTLSQHLCNPRCHPRYRPW*SMSFSK Trigger: CTTAGAAAAACTCATTGACCACCAAGGCCTGTACCT...AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGAGGTGGCACTTGGCTTTaGAGCTGGAACTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRGGTWL*SWNSQA Trigger: TGCCTGGGAGTTCCAGCTTCAAAGCCAAGTGCCACC...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | ACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCTCCGGAGAAGGTTTTTaGCCCTGTAGCGACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THYCFCQEEEEVLPTTLSSGEGF*PCSDTA Trigger: AGCAGTGTCGCTACAGGGTCAAAAACCTTCTCCGGA...GGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | AGATACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTGCGGATGGCTGTTCTTaGCTTTCCGGTAGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RYTLLLLSGGGGGVAYNAADGCS*LSGSSG Trigger: TCCGGAACTACCGGAAAGCCAAGAACAGCCATCCGC...AGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR TCA 90 bp | GTGACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATTCCGGAGAAGGTTTTTaGCCCTGTAGCGACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSFRGDSNQELPPTFSHSGEGF*PCSDTA Trigger: AGCAGTGTCGCTACAGGGTCAAAAACCTTCTCCGGA...ATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | GTGACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATCCGAGCCCTCATCAGTaGGTCCATCTCCTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTSFRGDSNQELPPTFSHPSPHQ*VHLLIE Trigger: TTCTATGAGGAGATGGACTCACTGATGAGGGCTCGG...ATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCCAAAACATCCTGCTCTaGAATCTGGTCTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQSATNKKSTVYGPPCRSQNILL*NLVFFL Trigger: GAGGAAGAAGACCAGATTTCAGAGCAGGATGTTTTG...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCATCCGGTCCTTGCTCTTaGTGGGAGGTGGCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSSGPCS*WEVALG Trigger: GCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGA...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATGAAGAAACTGAGCCAGAGAGACCAAAAGGCAGGCGAGACTGAGCACTGTTTTGGTGACAGGTaGGAAGCTTTTCGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEMKKLSQRDQKAGETEHCFGDR*EAFRRR Trigger: CCTTCGCCGAAAAGCTTCGCACCTGTCACCAAAACA...GTGCTCAGTCTCGCCTGCCTTTTGGTCTCTCTGGCTCAGTTTCTTCATTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | ACACATTATTGCTTCTGTCAGGAGGAGGAGGAGGTGTTGCCTACAACGCTTTCCCTGCTTCGAAGGACCTaGAGTCTTCAGAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: THYCFCQEEEEVLPTTLSLLRRT*SLQSIA Trigger: AGCTATGCTCTGAAGACTCCAGGTCCTTCGAAGCAG...GGAAAGCGTTGTAGGCAACACCTCCTCCTCCTCCTGACAGAAGCAATAATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAAAATGCTCGCCATCTTTaGAACAGTTGGGGCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVYLDKAPGKSPKTSCSENARHL*NSWGLG Trigger: CCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATT...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCGAAGGGGCAGGTCCCTaGCGGATGGCTGTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKLPGFYKDGTSRFTASEGAGP*RMAVLG Trigger: GCCAAGAACAGCCATCCGCCAGGGACCTGCCCCTTC...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTGGCCCCCTGCAATCCTaGGCCCCTGAAGAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDSICKDIVRILCVYWACGPLQS*APEETP Trigger: AGGAGTCTCTTCAGGGGCCCAGGATTGCAGGGGGCC...ACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCAAGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGCCAGGGACGGGGCTGTaGCTCTCCTTCTCGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSDSICKDIVRILCVYWPGTGL*LSFSGL Trigger: CAGACCCGAGAAGGAGAGCCACAGCCCCGTCCCTGG...CCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACTTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTAGAGCCGTGGGTCACTaGCTGCAGCTGGAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDSICKDIVRILCVYWACRAVGH*LQLEPL Trigger: CAGAGGTTCCAGCTGCAGCCAGTGACCCACGGCTCT...ACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTGGCAGGGCTCCTTCTTaGCTTGTCTACTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSGRAPS*LVYWGS Trigger: CGAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCC...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCGAACGGGCAGGTTCCTaGTGGACAGCTGCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKLPGFYKDGTSRFTASERAGS*WTAALG Trigger: GCCAAGAGCAGCTGTCCACCAGGAACCTGCCCGTTC...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAATCTGGCTGTTTTGGTaGCAGGTGCGAAGCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSFRGDSNQELPPTFSHTIWLFW*QVRSFS Trigger: CGAAAAGCTTCGCACCTGTCACCAAAACAGCCAGAT...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCCTGTGGATCCTTTGGTaGCTCGTGAGGGCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKLPGFYKDGTSRFTASLWILW*LVRAEL Trigger: GAGCTCTGCCCTCACGAGTCACCAAAGGATCCACAG...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACATTTCAAGGACTCAGGTaGCATCTTGGAAAGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFRGDSNQELPPTFSHTFQGLR*HLGKVG Trigger: CCCGACCTTTCCAAGATGCCACCTGAGTCCTTGAAA...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTGGAACAGTTGGGGCTTaGGGTGTGAGGACAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSGTVGA*GVRTAL Trigger: GAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCC...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAAATAGCTCTTGCTGGGAGGTaGCACTTGGCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLEGTAIKSFHLLSHIQIALAGR*HLALKL Trigger: CAGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGC...TATTTGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AGGACCCTTCCTTTCAGACCCAGGGTATCCTACGTATCTTCTTACTGCAATAACATATGGATTCTCTGGTaGGTACTGAGGTTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPFRPRVSYVSSYCNNIWILW*VLRLAR Trigger: CCGTGCCAACCTCAGTACCCACCAGAGAATCCATAT...GTTATTGCAGTAAGAAGATACGTAGGATACCCTGGGTCTGAAAGGAAGGGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCACGAAGGGGGACTCACTaGGAATTGCCAGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSRRGTH*ELPERP Trigger: AGGTCTTTCTGGCAATTCTCAGTGAGTCCCCCTTCG...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | TCTACACCTCCTCTCACTGTGAGTTTTCAAGGTTTTCCCTGTGAGGATTTGCTCGGCCTTGGTGGTCAATaGGTTTTTCTAAGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STPPLTVSFQGFPCEDLLGLGGQ*VFLSPP Trigger: AGGAGGACTTAGAAAAACTCATTGACCACCAAGGCC...GAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAGAGGAGGTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTATCCAGGGAGGCCTGTaGCTTCTCCTACCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDSICKDIVRILCVYWACIQGGL*LLLPSP Trigger: TGGAGATGGTAGGAGAAGCCACAGGCCTCCCTGGAT...ACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCTGCATCTGCAGGCTaGGAGTCTGGAGTCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSPASAG*ESGVRS Trigger: ACTTCTGACTCCAGACTCCCAGCCTGCAGATGCAGG...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTAATGCTCGCCATCTTTaGAACAGTTGGGGCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSNARHL*NSWGLG Trigger: CCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATT...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR TCA 90 bp | TTCTCAAGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGCGTAGGGTTTCTCTGTaGGGTACAGGCCTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSDSICKDIVRILCVYWRRVSL*GTGLGG Trigger: ACCACCAAGGCCTGTACCTCACAGAGAAACCCTACG...CCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR GCA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCCCTCCCAATCTCCAATaGTCGCCATCTTTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TSKLPGFYKDGTSRFTASPPNLQ*SPSLEQ Trigger: CTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGG...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTCTGCTTCGAAGGACCTaGAGTCTTCAGAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDSICKDIVRILCVYWACLLRRT*SLQSIA Trigger: AGCTATGCTCTGAAGACTCCAGGTCCTTCGAAGCAG...ACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCTTTCAAGGACTCAGGTaGCATCTTGGAAAGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSKLPGFYKDGTSRFTASFQGLR*HLGKVG Trigger: CCCGACCTTTCCAAGATGCCACCTGAGTCCTTGAAA...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTGTGGACAGCTGCTCTTaGCTTTCCTGTAGCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSVDSCS*LSCSFE Trigger: TTCGAAGCTACAGGAAAGCCAAGAGCAGCTGTCCAC...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CAA 72 bp | CCTCTACCTTCACCTAGAACCCAGGTCTTTCATACCTaGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPSPRTQVFHT*VTFSRMFFSPS Trigger: TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGGTGAAGGTAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| 3UTR CAA 72 bp | CTCACTGTGAGTTTTCAAGGTTTTCCCTGTGAGGATTaGCTCCAACTGCAAACTACCAAGAAGAACAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTVSFQGFPCED*LQLQTTKKNKN Trigger: GTTCTTGTTCTTCTTGGTAGTTTGCAGTTGGAGCAAATCCTCACAGGGAAAACCTTGAAAACTCACAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTGTGAGGTACAGGCCTTaGTGGTCAATGAGTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSVRYRP*WSMSFS Trigger: AGAAAAACTCATTGACCACCAAGGCCTGTACCTCAC...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCAATGTTTCAGCAGGTTTaGGCTCTGGTTAAAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSMFQQV*ALVKAF Trigger: AAAAGCTTTAACCAGAGCTCAAACCTGCTGAAACAT...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTGAGACTCACTTAAGATaGCCAGGAAAGTCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSETHLR*PGKSWF Trigger: AAACCAAGACTTTCCTGGCCATCTTAAGTGAGTCTC...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCAAGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGTCCCCCAAAACATCCTaGTCTGAAATCTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSDSICKDIVRILCVYWSPKTS*SEIWSS Trigger: AGAAGACCAGATTTCAGAGCAGGATGTTTTGGGGGA...CCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACTTGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| 3UTR CAA 72 bp | ACATCGGAAGGTTTCTTTCTAGAGTGTTTTAGGAACTaGAGAGGCATAGATACACATTATTGCTTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSEGFFLECFRN*RGIDTHYCFCQ Trigger: CTGACAGAAGCAATAATGTGTATCTATGCCTCTCAAGTTCCTAAAACACTCTAGAAAGAAACCTTCCGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 90 bp | TCCGCACCCCATTGGCACGGCTCTCCCCAGGCCCTTGAGTCTGCCTaGGCCACTGCCTGCACTGGCTTGTCTTGCGCACTGTCCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SAPHWHGSPQALESA*ATACTGLSCALSRL Trigger: TAGCCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGCCTGGGGAGAGCCGTGCCAATGGGGTGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 90 bp | TGGCACGGCTCTCCCCAGGCCCTTGAGTCTGCCTGGGCCACTGCCTaGACTGGCTTGTCTTGCGCACTGTCCAGGCTATCGTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WHGSPQALESAWATA*TGLSCALSRLSSAA Trigger: TGCTGCAGACGATAGCCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGCCTGGGGAGAGCCGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS CCA 90 bp | CACCTCCTGCGGGGTCCTGGCAGGGCTCCTTCTTGGCTTGTCTACTaGGGCTCGGGGTTTCCTGGGACTTGCCTGCCACCTCCCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLLRGPGRAPSWLVY*GSGFPGTCLPPPNL Trigger: GAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCCAGGACCCCGCAGGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 90 bp | ACTGCTTCGAAGGACCTGGAGTCTTCAGAGCATAGCTCCAGTCCCTaGTGTCCGGCAGCCCAGGCCTCTCGGTGCCAATCCTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TASKDLESSEHSSSP*CPAAQASRCQSSTR Trigger: CCTGGTGGAGGATTGGCACCGAGAGGCCTGGGCTGCCGGACAGCAGGGACTGGAGCTATGCTCTGAAGACTCCAGGTCCTTCGAAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 90 bp | CAGGCCCTTGAGTCTGCCTGGGCCACTGCCTGCACTGGCTTGTCTTaGGCACTGTCCAGGCTATCGTCTGCAGCACTCCCATTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QALESAWATACTGLS*ALSRLSSAALPFPE Trigger: TTCTGGGAATGGGAGTGCTGCAGACGATAGCCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS CCA 90 bp | CTCCACCCACTGTTTTCGGGGCTGGCCCTCAGAGCCGTGGGTCACTaGCTGCAGCTGGAACCTCTGGAACTCCTGAACTGCTTCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHPLFSGLALRAVGH*LQLEPLELLNCFEG Trigger: TCCTTCGAAGCAGTTCAGGAGTTCCAGAGGTTCCAGCTGCAGCCAGTGACCCACGGCTCTGAGGGCCAGCCCCGAAAACAGTGGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 90 bp | TGGCAGGGCTCCTTCTTGGCTTGTCTACTGGGGCTCGGGGTTTCCTaGGACTTGCCTGCCACCTCCCAATCTCCAATGCTCGCCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WQGSFLACLLGLGVS*DLPATSQSPMLAIF Trigger: AAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCTCCTACCATCTCCACGGCTCTGATCACAGTCCGAGCCCTCATCAGTGAGGGGGTTTCCTGGGACTaGCCTGCCACCTCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: ASPTISTALITVRALISEGVSWD*PATSQS Trigger: AGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCC...CTCACTGATGAGGGCTCGGACTGTGATCAGAGCCGTGGAGATGGTAGGAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAAATGAAGAAACTGAGCCAGAGAGACCAAAAGGCAGGCGAGACTGAGCACGTCCTCCGCACCCCATaGGCACGGCTCTCCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEMKKLSQRDQKAGETEHVLRTP*ARLSPG Trigger: GCCTGGGGAGAGCCGTGCCAATGGGGTGCGGAGGAC...GTGCTCAGTCTCGCCTGCCTTTTGGTCTCTCTGGCTCAGTTTCTTCATTTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 90 bp | GCTCCTTCTTGGCTTGTCTACTGGGGCTCGGGGTTTCCTGGGACTTaGCTGCCACCTCCCAATCTCCAATGCTCGCCATCTTTGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: APSWLVYWGSGFPGT*LPPPNLQCSPSLEQ Trigger: CTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAAGAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTCTCACCCCAGGCCTCTaGGTCATCAGCCTCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLLTPGL*VISLST Trigger: AGTACTGAGGCTGATGACCAAGAGGCCTGGGGTGAG...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCTGGGAAGGGGCTTCCGGTTCCTAGAAGAAGGCTAGGGAGTGACCTCCTTGCCACTGTGGATCCTTaGGTGACTCGTGAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPGKGLPVPRRRLGSDLLATVDP*VTREGR Trigger: TCTGCCCTCACGAGTCACCAAAGGATCCACAGTGGC...AAGGAGGTCACTCCCTAGCCTTCTTCTAGGAACCGGAAGCCCCTTCCCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS TCA 90 bp | TCAGAGCCGTGGGTCACTGGCTGCAGCTGGAACCTCTGGAACTCCTaGACTGCTTCGAAGGACCTGGAGTCTTCAGAGCATAGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SEPWVTGCSWNLWNS*TASKDLESSEHSSS Trigger: ACTGGAGCTATGCTCTGAAGACTCCAGGTCCTTCGAAGCAGTTCAGGAGTTCCAGAGGTTCCAGCTGCAGCCAGTGACCCACGGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 90 bp | GCCTGCCACCTCCCAATCTCCAATGCTCGCCATCTTTGGAACAGTTaGGGCTTGGGGTGTGAGGACAGCACTCTCTTTCAAGGACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACHLPISNARHLWNS*GLGCEDSTLFQGLR Trigger: CCTGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCTGAAGGCATTGCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCGCTGGGAGGTGGCACTaGGCTTTGAAGCTGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ERAEGIAAPRMTLSQHLCAGRWH*ALKLEL Trigger: GAGTTCCAGCTTCAAAGCCAAGTGCCACCTCCCAGC...GCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGCAATGCCTTCAGCTCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCCGGTCTCGGAAGAACTaGCCACACTCGGGGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQSATNKKSTVYGPPCRSRSRKN*PHSGHS Trigger: CGAATGCCCCGAGTGTGGCAAGTTCTTCCGAGACCG...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS CCA 90 bp | CTGGGACTTGCCTGCCACCTCCCAATCTCCAATGCTCGCCATCTTTaGAACAGTTGGGGCTTGGGGTGTGAGGACAGCACTCTCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGLACHLPISNARHL*NSWGLGCEDSTLFQ Trigger: TTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 90 bp | ACCTCCCAATCTCCAATGCTCGCCATCTTTGGAACAGTTGGGGCTTaGGGTGTGAGGACAGCACTCTCTTTCAAGGACTCAGGTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TSQSPMLAIFGTVGA*GVRTALSFKDSGGI Trigger: GATGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCACCCAGAATGACCTTGTCCCAGCACCTGTGCAATCCCAGATGCCACCCTTGTGAGGTACAGGCCTaGGTGGTCAATGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAPRMTLSQHLCNPRCHPCEVQA*VVNEFF Trigger: GAAAAACTCATTGACCACCAAGGCCTGTACCTCACA...AGGGTGGCATCTGGGATTGCACAGGTGCTGGGACAAGGTCATTCTGGGTGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 90 bp | CCATTCCCAGAATTTATAAGGCTCAGACCCCAAATCTCCGGTCCTTaGTCTTGCTGGGAGGTGGCACTTGGCTTTGAAGCTGGAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PFPEFIRLRPQISGP*SCWEVALGFEAGTP Trigger: GGGAGTTCCAGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAGATTTGGGGTCTGAGCCTTATAAATTCTGGGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 90 bp | CACTGCCTGCACTGGCTTGTCTTGCGCACTGTCCAGGCTATCGTCTaGAGCACTCCCATTCCCAGAATTTATAAGGCTCAGACCCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HCLHWLVLRTVQAIV*STPIPRIYKAQTPN Trigger: ATTTGGGGTCTGAGCCTTATAAATTCTGGGAATGGGAGTGCTGCAGACGATAGCCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTATATCTTGATAAGGCGCCAGGCAAATCCCCCAAAACATCCTGCTCTGAATGGCAGGGCTCCTTCTaGGCTTGTCTACTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVYLDKAPGKSPKTSCSEWQGSF*ACLLGL Trigger: GAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCCA...TTCAGAGCAGGATGTTTTGGGGGATTTGCCTGGCGCCTTATCAAGATATACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGGCAGCTTAGGACAAGAGGACTCAAGCTAAAAGGGTGTCATGAACCTAGAGGGGTTTCCTGGGACTaGCCTGCCACCTCCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: IGQLRTRGLKLKGCHEPRGVSWD*PATSQS Trigger: AGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCC...TCTAGGTTCATGACACCCTTTTAGCTTGAGTCCTCTTGTCCTAAGCTGCCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACACCAAATCTCCGGTCCTaGCTCTTGCTGGGAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSFRGDSNQELPPTFSHTPNLRS*LLLGGG Trigger: GCCACCTCCCAGCAAGAGCAAGGACCGGAGATTTGG...TGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCCCTCAGGCTCATCCCGCTGGTaGGGAGGTCCTCCCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQVFHTLVTFSRMFFSPSGSSRW*GGPPKW Trigger: CCACTTGGGAGGACCTCCCAACCAGCGGGATGAGCC...TGAGGGAGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAAAGTGCTACAAACAAGAAAAGCACTGTGTATGGGCCTCCCTGCCGTAGCAAGTGGGAGCTGTTGTaGAAGTCTTTGCCGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQSATNKKSTVYGPPCRSKWELL*KSLPHS Trigger: AGAATGCGGCAAAGACTTCAACAACAGCTCCCACTT...GCTACGGCAGGGAGGCCCATACACAGTGCTTTTCTTGTTTGTAGCACTTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCTCCGGTCCTTGCTCTaGCTGGGAGGTGGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSLRSLL*LGGGTW Trigger: CCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAG...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGGCGTGTTGGCAGGGCTCCTTCTaGGCTTGTCTACTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSICKDIVRILCVYWACWQGSF*ACLLGL Trigger: GAGCCCCAGTAGACAAGCCAAGAAGGAGCCCTGCCA...ACACGCCCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTAGAGGGGACAGCAATCAAGAGCTTCCACCTACTTTCTCACATACAAATAAGGTGGCACTTGGCTTaGAAGCTGGAACTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLEGTAIKSFHLLSHIQIRWHLA*KLELPG Trigger: GCCTGGGAGTTCCAGCTTCAAAGCCAAGTGCCACCT...TATTTGTATGTGAGAAAGTAGGTGGAAGCTCTTGATTGCTGTCCCCTCTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAAATTACCCGGATTTTACAAAGATGGCACCTCTAGATTTACAGCAAGCTGGAACAGTTGGGGCTaGGGGTGTGAGGACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSKLPGFYKDGTSRFTASWNSWG*GCEDST Trigger: AGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCA...GCTTGCTGTAAATCTAGAGGTGCCATCTTTGTAAAATCCGGGTAATTTGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAGTGACAGCATTTGTAAAGACATCGTAAGGATTCTATGTGTGTATTGGACTGCCTGCACTGGCTaGTCTTGCGCACTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSSDSICKDIVRILCVYWTACTG*SCALSR Trigger: CCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGT...CCAATACACACATAGAATCCTTACGATGTCTTTACAAATGCTGTCACTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGAACCCAGGTCTTTCATACCTTGGTAACTTTCTCTAGAATGTTCTTCTCTCTGTTGTTGAAGTCTTaGCCGCATTCTGTGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRTQVFHTLVTFSRMFFSLLLKS*PHSVHL Trigger: CAAGTGCACAGAATGCGGCAAAGACTTCAACAACAG...AGAGAAGAACATTCTAGAGAAAGTTACCAAGGTATGAAAGACCTGGGTTCTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS TCA 72 bp | CTCCGCACCCCATTGGCACGGCTCTCCCCAGGCCCTTaGGTCTGCCTGGGCCACTGCCTGCACTGGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRTPLARLSPGP*VCLGHCLHWLV Trigger: GACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGCCTGGGGAGAGCCGTGCCAATGGGGTGCGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 72 bp | TGGAGCCAGGCACGCACTGTCCCCACGATCACCTCCTaGGGGGTCCTGGCAGGGCTCCTTCTTGGCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSQARTVPTITS*GVLAGLLLGLS Trigger: AGACAAGCCAAGAAGGAGCCCTGCCAGGACCCCGCAGGAGGTGATCGTGGGGACAGTGCGTGCCTGGCTCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | TCGGGACGTGCATTCTCCACCCACTGTTTTCGGGGCTaGCCCTCAGAGCCGTGGGTCACTGGCTGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRAFSTHCFRG*PSEPWVTGCSW Trigger: CCAGCTGCAGCCAGTGACCCACGGCTCTGAGGGCCAGCCCCGAAAACAGTGGGTGGAGAATGCACGTCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | CATTGGCACGGCTCTCCCCAGGCCCTTGAGTCTGCCTaGGCCACTGCCTGCACTGGCTTGTCTTGCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HWHGSPQALESA*ATACTGLSCAL Trigger: CAGTGCGCAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTCAAGGGCCTGGGGAGAGCCGTGCCAATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 72 bp | AACTCCCAGGCACGCACTGTCCCCACGATCACCTCCTaGGGGGTCCTGGCAGGGCTCCTTCTTGGCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSQARTVPTITS*GVLAGLLLGLS Trigger: AGACAAGCCAAGAAGGAGCCCTGCCAGGACCCCGCAGGAGGTGATCGTGGGGACAGTGCGTGCCTGGGAGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 72 bp | AAGGACCTGGAGTCTTCAGAGCATAGCTCCAGTCCCTaGTGTCCGGCAGCCCAGGCCTCTCGGTGCCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: KDLESSEHSSSP*CPAAQASRCQS Trigger: GGATTGGCACCGAGAGGCCTGGGCTGCCGGACAGCAGGGACTGGAGCTATGCTCTGAAGACTCCAGGTCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 72 bp | GAGTCTGCCTGGGCCACTGCCTGCACTGGCTTGTCTTaGGCACTGTCCAGGCTATCGTCTGCAGCACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESAWATACTGLS*ALSRLSSAALP Trigger: TGGGAGTGCTGCAGACGATAGCCTGGACAGTGCGCAAGACAAGCCAGTGCAGGCAGTGGCCCAGGCAGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS GCA 72 bp | GTAGCGACACTGCTCCAGAGTCCGCAAGAAGCCCCGTaGCCTCAGTCGCTCTGCGATAGCCCGGTATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VATLLQSPQEAP*PQSLCDSPVYL Trigger: CAGGTATACCGGGCTATCGCAGAGCGACTGAGGGCACGGGGCTTCTTGCGGACTCTGGAGCAGTGTCGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | CTGTTTTCGGGGCTGGCCCTCAGAGCCGTGGGTCACTaGCTGCAGCTGGAACCTCTGGAACTCCTGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFSGLALRAVGH*LQLEPLELLNC Trigger: GCAGTTCAGGAGTTCCAGAGGTTCCAGCTGCAGCCAGTGACCCACGGCTCTGAGGGCCAGCCCCGAAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 72 bp | CAAGGACTCAGGTGGCATCTTGGAAAGGTCGGGACGTaGATTCTCCACCCACTGTTTTCGGGGCTGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLRWHLGKVGT*ILHPLFSGLAL Trigger: GAGGGCCAGCCCCGAAAACAGTGGGTGGAGAATGCACGTCCCGACCTTTCCAAGATGCCACCTGAGTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 72 bp | TGGCTTGTCTACTGGGGCTCGGGGTTTCCTGGGACTTaGCTGCCACCTCCCAATCTCCAATGCTCGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: WLVYWGSGFPGT*LPPPNLQCSPS Trigger: AGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | GACCCCAAATCTCCGGTCCTTGCTCTTGCTGGGAGGTaGCACTTGGCTTTGAAGCTGGAACTCCCAGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: DPKSPVLALAGR*HLALKLELPGT Trigger: CGTGCCTGGGAGTTCCAGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAGATTTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS CAA 72 bp | TTGGCTTGTCTACTGGGGCTCGGGGTTTCCTGGGACTaGCCTGCCACCTCCCAATCTCCAATGCTCGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LACLLGLGVSWD*PATSQSPMLAI Trigger: GATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CAA 90 bp | TCAGACCCCAAATCTCCGGTCCTTGCTCTTGCTGGGAGGTGGCACTaGGCTTTGAAGCTGGAACTCCCAGGCACGCACTGTCCCCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SDPKSPVLALAGRWH*ALKLELPGTHCPHD Trigger: ATCGTGGGGACAGTGCGTGCCTGGGAGTTCCAGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAGATTTGGGGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS CAA 90 bp | GGCTCCTTCTTGGCTTGTCTACTGGGGCTCGGGGTTTCCTGGGACTaGCCTGCCACCTCCCAATCTCCAATGCTCGCCATCTTTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GSFLACLLGLGVSWD*PATSQSPMLAIFGT Trigger: TGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAAGAAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | TCCTTCTTGGCTTGTCTACTGGGGCTCGGGGTTTCCTaGGACTTGCCTGCCACCTCCCAATCTCCAATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFLACLLGLGVS*DLPATSQSPML Trigger: GAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAACCCCGAGCCCCAGTAGACAAGCCAAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS GCA 72 bp | TTTCCTGGGACTTGCCTGCCACCTCCCAATCTCCAATaGTCGCCATCTTTGGAACAGTTGGGGCTTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPGTCLPPPNLQ*SPSLEQLGLGV Trigger: CACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTGGCAGGCAAGTCCCAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CAA 72 bp | AAATCTCCGGTCCTTGCTCTTGCTGGGAGGTGGCACTaGGCTTTGAAGCTGGAACTCCCAGGCACGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KSPVLALAGRWH*ALKLELPGTHC Trigger: ACAGTGCGTGCCTGGGAGTTCCAGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
||
| CDS TCA 72 bp | TGCTCGCCATCTTTGGAACAGTTGGGGCTTGGGGTGTaGGGACAGCACTCTCTTTCAAGGACTCAGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSPSLEQLGLGV*GQHSLSRTQVA Trigger: TGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CCA 72 bp | GGGTGTGAGGACAGCACTCTCTTTCAAGGACTCAGGTaGCATCTTGGAAAGGTCGGGACGTGCATTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCEDSTLFQGLR*HLGKVGTCILH Trigger: GTGGAGAATGCACGTCCCGACCTTTCCAAGATGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
||
| CDS CAA 90 bp | CACCTCCCAATCTCCAATGCTCGCCATCTTTGGAACAGTTGGGGCTaGGGGTGTGAGGACAGCACTCTCTTTCAAGGACTCAGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLPISNARHLWNSWG*GCEDSTLFQGLRWH Trigger: ATGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGATTGGGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS CCA 72 bp | GGACAGCACTCTCTTTCAAGGACTCAGGTGGCATCTTaGAAAGGTCGGGACGTGCATTCTCCACCCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: GQHSLSRTQVAS*KGRDVHSPPTV Trigger: AACAGTGGGTGGAGAATGCACGTCCCGACCTTTCCAAGATGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS CAA 72 bp | AGGACAGCACTCTCTTTCAAGGACTCAGGTGGCATCTaGGAAAGGTCGGGACGTGCATTCTCCACCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RTALSFKDSGGI*ERSGRAFSTHC Trigger: ACAGTGGGTGGAGAATGCACGTCCCGACCTTTCCAAGATGCCACCTGAGTCCTTGAAAGAGAGTGCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS GCA 72 bp | CACTGGCTTGTCTTGCGCACTGTCCAGGCTATCGTCTaGAGCACTCCCATTCCCAGAATTTATAAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HWLVLRTVQAIV*STPIPRIYKAQ Trigger: CTGAGCCTTATAAATTCTGGGAATGGGAGTGCTGCAGACGATAGCCTGGACAGTGCGCAAGACAAGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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| CDS CCA 72 bp | TCTCCAATGCTCGCCATCTTTGGAACAGTTGGGGCTTaGGGTGTGAGGACAGCACTCTCTTTCAAGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SPMLAIFGTVGA*GVRTALSFKDS Trigger: TGAGTCCTTGAAAGAGAGTGCTGTCCTCACACCCCAAGCCCCAACTGTTCCAAAGATGGCGAGCATTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097877.9 ENSMUST00000135309.2 |
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| CDS GCA 72 bp | GAATTTATAAGGCTCAGACCCCAAATCTCCGGTCCTTaGTCTTGCTGGGAGGTGGCACTTGGCTTTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: EFIRLRPQISGP*SCWEVALGFEA Trigger: AGCTTCAAAGCCAAGTGCCACCTCCCAGCAAGAGCAAGGACCGGAGATTTGGGGTCTGAGCCTTATAAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097877.9 |
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