Pregenerated sensors for ZSCAN12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036721Ensembl transcript IDs: ENSMUST00000053293.14, ENSMUST00000099720.3, ENSMUST00000225545.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTGGAACTAGTTATGGACAGGTCTGAGCTGCCGCGTGGGTGCTaGGAAATGAACTCACATCTTCAGGATGAGCAACCAGTGGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ALELVMDRSELPRGC*EMNSHLQDEQPVVL Trigger: TAAGACCACTGGTTGCTCATCCTGAAGATGTGAGTTCATTTCCCAGCACCCACGCGGCAGCTCAGACCTGTCCATAACTAGTTCCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | GCTCTCAACCAAAGCAGTTGTTCTGACTCAACAACACAAGGGTGGTaGGTGGCAGCCTCCTACTGGAGAGCAGCAACATCTTTTAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: ALNQSSCSDSTTQGW*VAASYWRAATSFRH Trigger: GTGCCTAAAAGATGTTGCTGCTCTCCAGTAGGAGGCTGCCACTCACCACCCTTGTGTTGTTGAGTCAGAACAACTGCTTTGGTTGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | TTAGAGACAAAGGAGAAGAGTGCTCTGTCAGTGCACCACAAGCATTaGTTGGCTAGCATTCCTAGACCATCCTCCTACTCTGTCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LETKEKSALSVHHKH*LASIPRPSSYSVLK Trigger: CTTGAGGACAGAGTAGGAGGATGGTCTAGGAATGCTAGCCAATCAATGCTTGTGGTGCACTGACAGAGCACTCTTCTCCTTTGTCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 90 bp | AGACAAAGGAGAAGAGTGCTCTGTCAGTGCACCACAAGCATTGATTaGCTAGCATTCCTAGACCATCCTCCTACTCTGTCCTCAAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: RQRRRVLCQCTTSID*LAFLDHPPTLSSSY Trigger: ATAGCTTGAGGACAGAGTAGGAGGATGGTCTAGGAATGCTAGCCAATCAATGCTTGTGGTGCACTGACAGAGCACTCTTCTCCTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | ACCAAACCCGGGTTATCTACAAGAGCAACAAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCTCCTGCATCCTGCTTTCTTTTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: TKPGLSTRATSALNC*AISPASCILLSFSL Trigger: TAAAGAAAAAGAAAGCAGGATGCAGGAGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTTGTTGCTCTTGTAGATAACCCGGGTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 90 bp | GATGTTGATGTTTGCCCATGTTGGGGTATAGTGGATGTCACAGACTaGATTGGAAGCCAGATACAAGAACTTGGTTTCTGGTCTTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: DVDVCPCWGIVDVTD*IGSQIQELGFWSSS Trigger: CGAGGAAGACCAGAAACCAAGTTCTTGTATCTGGCTTCCAATCCAGTCTGTGACATCCACTATACCCCAACATGGGCAAACATCAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | ACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTaGGGTAGCTTCCCTGTAGTCATCACACAGAGTACTTGCTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: TTKHYKYNTLHQPTP*GSFPVVITQSTCSF Trigger: AAAAGAGCAAGTACTCTGTGTGATGACTACAGGGAAGCTACCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | ACCAAAGAAGGAAGCCAGACCTTTTTCTCAACAGTTCTAGTATCCTaGGACTTCAAACACTCACTAATTAAATCACCAGAGGCTCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: TKEGSQTFFSTVLVS*DFKHSLIKSPEALN Trigger: GTTGAGAGCCTCTGGTGATTTAATTAGTGAGTGTTTGAAGTCTCAGGATACTAGAACTGTTGAGAAAAAGGTCTGGCTTCCTTCTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | CAGAGGGAGCTCATCAAATATTTATGGTCTCGTAACAGCAAAGGCTaGAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: QRELIKYLWSRNSKG*NVTTKHYKYNTLHQ Trigger: CTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGATGAGCTCCCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 90 bp | TGGTCCTTCAAAAATATTTTCTACTACTTTAATTCTAAAGCACGCTaGGCATCAATTCCACTGCCCTTCTCTTTAACTATGGTAGACTTC | + |
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Preference number: 1 (lower is better) Translates to: WSFKNIFYYFNSKAR*ASIPLPFSLTMVDF Trigger: GAAGTCTACCATAGTTAAAGAGAAGGGCAGTGGAATTGATGCTCAGCGTGCTTTAGAATTAAAGTAGTAGAAAATATTTTTGAAGGACCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGCAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KQAVVSLHVGASFLQEKSSALNC*AISPAS Trigger: GGAGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACT...GCTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACTTGGTTTCTGGTCTTCCTCGCTGTGGTATAACAGCTGTCATCTGCACGTGCTCAGCAAGCTCTaGCTCCTGTCTGAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QELGFWSSSLWYNSCHLHVLSKL*LLSEGL Trigger: AAGACCTTCAGACAGGAGTCAGAGCTTGCTGAGCAC...GTGCAGATGACAGCTGTTATACCACAGCGAGGAAGACCAGAAACCAAGTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGCTCAGCGCTAGGCACCTaGATAACATCCATGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KQAVVSLHVGASFLQEKSSALGT*ITSMQA Trigger: TGCTTGCATGGATGTTATGCAGGTGCCTAGCGCTGA...GCTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGATGGTGTTCACCTTGTaGAGCTGGGGACAAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: QTGCCEPPCGCQFSARKEMVFTL*SWGQMF Trigger: GAACATTTGTCCCCAGCTCCACAAGGTGAACACCAT...CTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGGTGCTCAGCAAGCTCTaGCTCCTGTCTGAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VVITQSTCSFVTSLMMSKVLSKL*LLSEGL Trigger: AAGACCTTCAGACAGGAGTCAGAGCTTGCTGAGCAC...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCACTATTTATGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTTGTCGGCTTCCAAACTACCTaGACTCTTGCTTCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SALFMCRSGLPACTYTLVGFQTT*TLASAH Trigger: GTGAGCAGAAGCAAGAGTGCAGGTAGTTTGGAAGCC...GACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACATAAATAGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTGTGCTCAGCAAGCTCTaGCTCCTGTCTGAAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SNIYGLVTAKAEMSPQSIVLSKL*LLSEGL Trigger: AAGACCTTCAGACAGGAGTCAGAGCTTGCTGAGCAC...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACAGATCAGAAGAAGGAATCAGATGCCCTAGAACCAGTTATAGATGGCTTTCGTAACAGCAAAGGCTaGAATGTCACCACAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PTDQKKESDALEPVIDGFRNSKG*NVTTKH Trigger: ATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACG...AAAGCCATCTATAACTGGTTCTAGGGCATCTGATTCCTTCTTCTGATCTGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGAGGTGTACAAGGAGTTaGTCCTTCAAAAATATTTTC | + |
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Preference number: 2 (lower is better) Translates to: QTGCCEPPCGCQFSARKERCTRS*SFKNIF Trigger: GAAAATATTTTTGAAGGACCAACTCCTTGTACACCT...CTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCCATACAGAGAATGTTCACACTGCAAAGACACACTAGAATTCTAGCAAAGCTGCCGCGTGGGTGCTaGGAAATGAACTCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: LSIQRMFTLQRHTRILAKLPRGC*EMNSHL Trigger: AAGATGTGAGTTCATTTCCCAGCACCCACGCGGCAG...CTTTGCTAGAATTCTAGTGTGTCTTTGCAGTGTGAACATTCTCTGTATGGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CAA 90 bp | TGCCCACGGATTAATCTGCTCACATTAATCTGTTCAGTAGATTCTTaGTCCTGTGTCTACAACCCAATGTTAGGTGAATCACATCACGTC | + |
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Preference number: 2 (lower is better) Translates to: CPRINLLTLICSVDS*SCVYNPMLGESHHV Trigger: GACGTGATGTGATTCACCTAACATTGGGTTGTAGACACAGGACAAAGAATCTACTGAACAGATTAATGTGAGCAGATTAATCCGTGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCCACGGATTAATCTGCTCACATTAATCTGTTCAGTAGATTCTTTGTCCTGTGTGGATGTCACAGACTaGATTGGAAGCCAGATACAA | + |
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Preference number: 2 (lower is better) Translates to: CPRINLLTLICSVDSLSCVDVTD*IGSQIQ Trigger: TTGTATCTGGCTTCCAATCCAGTCTGTGACATCCAC...ACAGGACAAAGAATCTACTGAACAGATTAATGTGAGCAGATTAATCCGTGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGATGATGAGTAAGAGCTaGGTTCTACGTGAACAATTC | + |
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Preference number: 2 (lower is better) Translates to: MSPQSITNTILFISRHREMMSKS*VLREQF Trigger: GAATTGTTCACGTAGAACTCAGCTCTTACTCATCAT...CTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTAATAAAGCCTCAGAGACAGACTATAACCTCTCCTATAAATCTCCTATCAATTCTAAAGCACGCTaGGCATCAATTCCACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: MVNKASETDYNLSYKSPINSKAR*ASIPLP Trigger: GGGCAGTGGAATTGATGCTCAGCGTGCTTTAGAATT...GATAGGAGATTTATAGGAGAGGTTATAGTCTGTCTCTGAGGCTTTATTAACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAAGCATGTTCCATGAATTTAGTCATGGAAGTCGGTCCTATCACATTGTCCATCACACAGAGTACTTaGTCTTTTGTGACTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: MQACSMNLVMEVGPITLSITQST*SFVTSL Trigger: CAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGAT...GGACAATGTGATAGGACCGACTTCCATGACTAAATTCATGGAACATGCTTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCCATACAGAGAATGTTCACACTGCAAAGACACACTAGAATTCTAGCAAAGGGTGATGTTGATGTTTaGCCATGTTGGGGTATAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSIQRMFTLQRHTRILAKGDVDV*PCWGIV Trigger: CACTATACCCCAACATGGGCAAACATCAACATCACC...CTTTGCTAGAATTCTAGTGTGTCTTTGCAGTGTGAACATTCTCTGTATGGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCCATACAGAGAATGTTCACACTGCAAAGACACACTAGAATTCTAGCAAAGCAAGAACTTGGTTTCTaGTCTTCCTCGCTGTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LSIQRMFTLQRHTRILAKQELGF*SSSLWY Trigger: ATACCACAGCGAGGAAGACCAGAAACCAAGTTCTTG...CTTTGCTAGAATTCTAGTGTGTCTTTGCAGTGTGAACATTCTCTGTATGGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTAATAAAGCCTCAGAGACAGACTATAACCTCTCCTATAAATCTCCTATCCCAGATACAAGAACTTaGTTTCTGGTCTTCCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: MVNKASETDYNLSYKSPIPDTRT*FLVFLA Trigger: AGCGAGGAAGACCAGAAACCAAGTTCTTGTATCTGG...GATAGGAGATTTATAGGAGAGGTTATAGTCTGTCTCTGAGGCTTTATTAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | TTATCCATACAGAGAATGTTCACACTGCAAAGACACACTAGAATTCTAGCAAAGACTACAATACTTCCATaGCCAGGTAAACCTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LSIQRMFTLQRHTRILAKTTILP*PGKPSR Trigger: CCTTGAAGGTTTACCTGGTCATGGAAGTATTGTAGT...CTTTGCTAGAATTCTAGTGTGTCTTTGCAGTGTGAACATTCTCTGTATGGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CAA 90 bp | GGATATGGAAAGTTTGATTCTGAGGTACTATGTGTACAACATTTCTaGTTCCATCATCATCATCCTGAGATAAAGGCAATGACATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GYGKFDSEVLCVQHF*FHHHHPEIKAMTWN Trigger: GTTCCATGTCATTGCCTTTATCTCAGGATGATGATGATGGAACAAGAAATGTTGTACACATAGTACCTCAGAATCAAACTTTCCATATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAATGATGAGTAAGAGCTaGGTTCTACGTGAACAATTC | + |
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Preference number: 2 (lower is better) Translates to: QQRLKCHHKALQIQYSSSMMSKS*VLREQF Trigger: GAATTGTTCACGTAGAACTCAGCTCTTACTCATCAT...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTATCACACAGAGTACTTaGTCTTTTGTGACTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SNIYGLVTAKAEMSPQSIITQST*SFVTSL Trigger: CAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGAT...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | TGGACAGGTCTGAGCTGCCGCGTGGGTGCTGGGAAATaGACTCACATCTTCAGGATGAGCAACCAGTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: WTGLSCRVGAGK*THIFRMSNQWS Trigger: AGACCACTGGTTGCTCATCCTGAAGATGTGAGTTCATTTCCCAGCACCCACGCGGCAGCTCAGACCTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | GGGTATCAGAGCCCTGGAACTAGTTATGGACAGGTCTaGGCTGCCGCGTGGGTGCTGGGAAATGAACTCACA | + |
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Preference number: 3 (lower is better) Translates to: GYQSPGTSYGQV*AAAWVLGNELT Trigger: TGTGAGTTCATTTCCCAGCACCCACGCGGCAGCTCAGACCTGTCCATAACTAGTTCCAGGGCTCTGATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | CTAGTTATGGACAGGTCTGAGCTGCCGCGTGGGTGCTaGGAAATGAACTCACATCTTCAGGATGAGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: LVMDRSELPRGC*EMNSHLQDEQP Trigger: TGGTTGCTCATCCTGAAGATGTGAGTTCATTTCCCAGCACCCACGCGGCAGCTCAGACCTGTCCATAACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGCGCCAGATACAAGAACTaGGTTTCTGGTCTTCCTCGC | + |
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Preference number: 3 (lower is better) Translates to: KQAVVSLHVGASFLQEKSARYKN*VSGLPR Trigger: GCGAGGAAGACCAGAAACCAAGTTCTTGTATCTGGC...GCTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | GGGTTATCTACAAGAGCAACAAGTGCTCTTAACTGCTaGGCCATCTCTCCAGCCTCCTGCATCCTGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: GLSTRATSALNC*AISPASCILLS Trigger: AGAAAGCAGGATGCAGGAGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTTGTTGCTCTTGTAGATAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | CACGACACCACAGGTGATGTTGATGTTTGCCCATGTTaGGGTATAGTGGATGTCACAGACTGGATTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: HDTTGDVDVCPC*GIVDVTDWIGS Trigger: GCTTCCAATCCAGTCTGTGACATCCACTATACCCCAACATGGGCAAACATCAACATCACCTGTGGTGTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | GCAGTTGTTCTGACTCAACAACACAAGGGTGGTGAGTaGCAGCCTCCTACTGGAGAGCAGCAACATCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: AVVLTQQHKGGE*QPPTGEQQHLL Trigger: TAAAAGATGTTGCTGCTCTCCAGTAGGAGGCTGCCACTCACCACCCTTGTGTTGTTGAGTCAGAACAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | CAGCAACTTTTGTTTAAAGAACACAAGGAGCGGGAGTaGAGCTCAGCGCTAGGCACCTGCATAACATCCATG | + |
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Preference number: 3 (lower is better) Translates to: QQLLFKEHKERE*SSALGTCITSM Trigger: CATGGATGTTATGCAGGTGCCTAGCGCTGAGCTCCACTCCCGCTCCTTGTGTTCTTTAAACAAAAGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | AAGGAGAAGAGTGCTCTGTCAGTGCACCACAAGCATTaGTTGGCTAGCATTCCTAGACCATCCTCCTACTCT | + |
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Preference number: 3 (lower is better) Translates to: KEKSALSVHHKH*LASIPRPSSYS Trigger: AGAGTAGGAGGATGGTCTAGGAATGCTAGCCAATCAATGCTTGTGGTGCACTGACAGAGCACTCTTCTCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | GGAATCAGATGCCCTAGAACCAGTTATAGATGGCTTTaGGCCATCACCATGTGGGTGATAGAAACCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: GIRCPRTSYRWL*AITMWVIETKP Trigger: GGGTTTGGTTTCTATCACCCACATGGTGATGGCTCAAAGCCATCTATAACTGGTTCTAGGGCATCTGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR GCA 72 bp | TCTCTAGTAGGCTGGCTTCCAAACTACCTGCACTCTTaGTTCTGCTCACCTATTTCACCAAAAGTGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SLVGWLPNYLHS*FCSPISPKVFS Trigger: GGAGAACACTTTTGGTGAAATAGGTGAGCAGAAGCAAGAGTGCAGGTAGTTTGGAAGCCAGCCTACTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | GACTGGATTGGAAGCCAGATACAAGAACTTGGTTTCTaGTCTTCCTCGCTGTGGTATAACAGCTGTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: DWIGSQIQELGF*SSSLWYNSCHL Trigger: CAGATGACAGCTGTTATACCACAGCGAGGAAGACCAGAAACCAAGTTCTTGTATCTGGCTTCCAATCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR CCA 72 bp | CCCATGTTGGGGTATAGTGGATGTCACAGACTGGATTaGAAGCCAGATACAAGAACTTGGTTTCTGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PMLGYSGCHRLD*KPDTRTWFLVF Trigger: GAAGACCAGAAACCAAGTTCTTGTATCTGGCTTCCAATCCAGTCTGTGACATCCACTATACCCCAACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR TCA 72 bp | TCATGGAAGTCGGTCCTATCACATTGTCCTAACCAATaGATGGACAAAGGTGCCCACGGATTAATCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: SWKSVLSHCPNQ*MDKGAHGLICS Trigger: TGAGCAGATTAATCCGTGGGCACCTTTGTCCATTCATTGGTTAGGACAATGTGATAGGACCGACTTCCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
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| 3UTR-3UTR CAA 90 bp | CCTACAGATCAGAAGAAGGAATCAGATGCCCTAGAACCAGTTATAGATGGCTTTTCCTGCTTCAGCATCTaGAGATATGCTGTGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PTDQKKESDALEPVIDGFSCFSI*RYAVIN Trigger: GTTTATCACAGCATATCTCAAGATGCTGAAGCAGGA...AAAGCCATCTATAACTGGTTCTAGGGCATCTGATTCCTTCTTCTGATCTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CCA 72 bp | CAGATACAAGAACTTGGTTTCTGGTCTTCCTCGCTGTaGTATAACAGCTGTCATCTGCACTATTTATGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QIQELGFWSSSL*YNSCHLHYLCV Trigger: TACACATAAATAGTGCAGATGACAGCTGTTATACCACAGCGAGGAAGACCAGAAACCAAGTTCTTGTATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCACTATTTATGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTTGTCCAGGTGTACAAGGAGTaGGTCCTTCAAAAATATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SALFMCRSGLPACTYTLVQVYKE*VLQKYF Trigger: AAAATATTTTTGAAGGACCAACTCCTTGTACACCTG...GACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACATAAATAGTGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR TCA 72 bp | AGATTCTTTGTCCTGTGTCTACAACCCAATGTTAGGTaGATCACATCACGTCTCCCAAATAAACCCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: RFFVLCLQPNVR*ITSRLPNKPNF Trigger: AAAGTTGGGTTTATTTGGGAGACGTGATGTGATTCACCTAACATTGGGTTGTAGACACAGGACAAAGAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CCA 72 bp | GCCCTTCTCTTTAACTATGGTAGACTTCCACATCTCTaGCTTAGTTGTAAATGTTCTAAGAAATCTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ALLFNYGRLPHL*LSCKCSKKSGV Trigger: AACTCCAGATTTCTTAGAACATTTACAACTAAGCCAGAGATGTGGAAGTCTACCATAGTTAAAGAGAAGGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR TCA 72 bp | CTCATCAAATATTTATGGTCTCGTAACAGCAAAGGCTaGAATGTCACCACAAAGCATTACAAATACAATACT | + |
|
Preference number: 3 (lower is better) Translates to: LIKYLWSRNSKG*NVTTKHYKYNT Trigger: AGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGATGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| 3UTR TCA 72 bp | CTTCAGCATCTTGAGATATGCTGTGATAAACAAGTATaGATGACCATATCGCTTCTACAATACATGTATACT | + |
|
Preference number: 3 (lower is better) Translates to: LQHLEICCDKQV*MTISLLQYMYT Trigger: AGTATACATGTATTGTAGAAGCGATATGGTCATTCATACTTGTTTATCACAGCATATCTCAAGATGCTGAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGGCCAGTCTCAACACCTaGAACTTGCTCCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRASLNT*NLLLLG Trigger: GCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGC...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGCTGGGCTTCACGGCCTaGAAGTTCACACCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRLGFTA*KFTPRL Trigger: AAGCCTGGGTGTGAACTTGCAGGCCGTGAAGCCCAG...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGCCAGTCTCAACACCTaGAACTTGCTCCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSPQSITNTILFISRHREASLNT*NLLLLG Trigger: GCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGC...CTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAGATCAGAAGAAGGAATCAGATGCCCTAGAACCAGTTATAGATGGCTTTCTGGGCTTCACGGCCTaGAAGTTCACACCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTDQKKESDALEPVIDGFLGFTA*KFTPRL Trigger: AAGCCTGGGTGTGAACTTGCAGGCCGTGAAGCCCAG...AAAGCCATCTATAACTGGTTCTAGGGCATCTGATTCCTTCTTCTGATCTGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGCATGTTCCATGAATTTAGTCATGGAAGTCGGTCCTATCACATTGTCCACCCAGGCTTGGCTTTaGCAAACTGAAGGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: MQACSMNLVMEVGPITLSTQAWL*QTEGTR Trigger: GCGTGTCCCTTCAGTTTGTCAAAGCCAAGCCTGGGT...GGACAATGTGATAGGACCGACTTCCATGACTAAATTCATGGAACATGCTTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGAGCTCATCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCAGCCAGTCTCAACACCTaGAACTTGCTCCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSNIYGLVTAKAEMSASLNT*NLLLLG Trigger: GCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGC...TGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGATGAGCTCCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053293.14 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGGGGTTTCTGCTCTGTTaGCAAAGGCTTCACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRGFLLC*QRLHLL Trigger: CAGGAGGTGAAGCCTTTGGCAACAGAGCAGAAACCC...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGGACACGCTGGGTTTCTaGTCTGTTGCCAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRDTLGF*SVAKGF Trigger: GAAGCCTTTGGCAACAGAGCAGAAACCCAGCGTGTC...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGCTGGGCTTCACGGCCTaGAAGTTCACACCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVITQSTCSFVTSLMMSKLGFTA*KFTPRL Trigger: AAGCCTGGGTGTGAACTTGCAGGCCGTGAAGCCCAG...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGAAACTTGCTCCTCCTaGGCTTCACGGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSPQSITNTILFISRHREETCSS*ASRPAS Trigger: ACTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTC...CTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGGAGCTGGGGACAAATGTTCTAGGAATCTGTAGTGGTTCCTGTTCATCATTCTTCTATGGCTCTTaGGATGGTGAAAGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVELGTNVLGICSGSCSSFFYGS*DGERGL Trigger: CAGGCCTCTTTCACCATCTCAAGAGCCATAGAAGAA...TGATGAACAGGAACCACTACAGATTCCTAGAACATTTGTCCCCAGCTCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTAAATGTTCTAAGAAATCTGGAGTTAGACTTCCTCCACAGCCACACACAAGGGTTTCTGCTCTGTTaGCAAAGGCTTCACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVNVLRNLELDFLHSHTQGFLLC*QRLHLL Trigger: CAGGAGGTGAAGCCTTTGGCAACAGAGCAGAAACCC...TTGTGTGTGGCTGTGGAGGAAGTCTAACTCCAGATTTCTTAGAACATTTACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAGAAACTTGCTCCTCCTaGGCTTCACGGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTETCSS*ASRPAS Trigger: ACTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTC...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGGGCTGGCTGTCTTCATaGGAAATACCAGAAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRGWLSS*EIPEDS Trigger: AGAGTCTTCTGGTATTTCCCATGAAGACAGCCAGCC...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCACTATTTATGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTTGTCTTAAGTGCTGACCACTaGCCAAAAGCCCTGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SALFMCRSGLPACTYTLVLSADH*PKALPH Trigger: ATGTGGCAGGGCTTTTGGCCAGTGGTCAGCACTTAA...GACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACATAAATAGTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | TGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTaGTCCCTCATGCCTACAGATCAGAAGAAGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: CVGVVCLHVHTH*SLMPTDQKKES Trigger: TGATTCCTTCTTCTGATCTGTAGGCATGAGGGACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | ATGTCACAGACTGGATTGGAAGCCAGATACAAGAACTaGGTTTCTGGTCTTCCTCGCTGTGGTATAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSQTGLEARYKN*VSGLPRCGITA Trigger: AGCTGTTATACCACAGCGAGGAAGACCAGAAACCAAGTTCTTGTATCTGGCTTCCAATCCAGTCTGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | AAGAGTCACAATGACACCTCAGACATACTGAGCATGTaGAGTGGGACAGGAACACTTACTCAGAGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHNDTSDILSM*SGTGTLTQRQV Trigger: AACCTGTCTCTGAGTAAGTGTTCCTGTCCCACTCAACATGCTCAGTATGTCTGAGGTGTCATTGTGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGGAGCTGGGGACAAATGTTCTAGGAATCTGTAGTGGTTCCTGTTCATCAGGTAGCAAAACTGTCTaGAGTATTTTCGGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LVELGTNVLGICSGSCSSGSKTV*SIFGRR Trigger: ACGTCTTCCGAAAATACTTCAGACAGTTTTGCTACC...TGATGAACAGGAACCACTACAGATTCCTAGAACATTTGTCCCCAGCTCCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAACCCAGGCTTGGCTTTaGCAAACTGAAGGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSTQAWL*QTEGTR Trigger: GCGTGTCCCTTCAGTTTGTCAAAGCCAAGCCTGGGT...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAGACACGCTGGGTTTCTaGTCTGTTGCCAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTDTLGF*SVAKGF Trigger: GAAGCCTTTGGCAACAGAGCAGAAACCCAGCGTGTC...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGCTCATCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACACTCATCACACCCATaGACTTTTCTCCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSNIYGLVTAKAEMSHSSHP*TFLPGQ Trigger: CTGTCCAGGGAGAAAAGTGCATGGGTGTGATGAGTG...TGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGATGAGCTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053293.14 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGTCCAAAAGTCCACCCTaGTTCTTACAGACCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRSKSPP*FLQTLV Trigger: TACCAAGGTCTGTAAGAACCAGGGTGGACTTTTGGA...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATGTTCTAAGAAATCTGGAGTTAGACTTCCTCCACAGCCACACACAAACCTGTTCTTCAGTTTaGACTGAGGCCCGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVNVLRNLELDFLHSHTQTCSSV*TEARYP Trigger: AGGATACCGGGCCTCAGTCCAAACTGAAGAACAGGT...TTGTGTGTGGCTGTGGAGGAAGTCTAACTCCAGATTTCTTAGAACATTTACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGAAACTTGCTCCTCCTaGGCTTCACGGCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSETCSS*ASRPAS Trigger: ACTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTC...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTATGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTTGTCCCTCATGGCTGGCTGTCTTCATaGGAAATACCAGAAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFMCRSGLPACTYTLVPHGWLSS*EIPEDS Trigger: AGAGTCTTCTGGTATTTCCCATGAAGACAGCCAGCC...ATGAGGGACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACATAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGTCATTACGCAGAGGCTaGCTGTCTTCATGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRSLRRG*LSSWEI Trigger: TATTTCCCATGAAGACAGCCAGCCTCTGCGTAATGA...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGATGCACTTTTCTCCCTaGACAGATGCTCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHHKALQIQYSSSADTVRMHFSP*TDALVF Trigger: AAACACCAGAGCATCTGTCCAGGGAGAAAAGTGCAT...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGTTCTTCTATGGCTCTTaGGATGGTGAAAGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVITQSTCSFVTSLMMSKFFYGS*DGERGL Trigger: CAGGCCTCTTTCACCATCTCAAGAGCCATAGAAGAA...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGGGTTTCTGCTCTGTTaGCAAAGGCTTCACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSGFLLC*QRLHLL Trigger: CAGGAGGTGAAGCCTTTGGCAACAGAGCAGAAACCC...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACACACTCATCACACCCATaGACTTTTCTCCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTHSSHP*TFLPGQ Trigger: CTGTCCAGGGAGAAAAGTGCATGGGTGTGATGAGTG...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGTCCAAAAGTCCACCCTaGTTCTTACAGACCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSPQSITNTILFISRHRESKSPP*FLQTLV Trigger: TACCAAGGTCTGTAAGAACCAGGGTGGACTTTTGGA...CTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGCATGTTCCATGAATTTAGTCATGGAAGTCGGTCCTATCACATTGTCCTCATTACGCAGAGGCTaGCTGTCTTCATGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: MQACSMNLVMEVGPITLSSLRRG*LSSWEI Trigger: TATTTCCCATGAAGACAGCCAGCCTCTGCGTAATGA...GGACAATGTGATAGGACCGACTTCCATGACTAAATTCATGGAACATGCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACATTAAGTGCTGACCACTaGCCAAAAGCCCTGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTLSADH*PKALPH Trigger: ATGTGGCAGGGCTTTTGGCCAGTGGTCAGCACTTAA...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCACACTCATCACACCCATaGACTTTTCTCCCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSHSSHP*TFLPGQ Trigger: CTGTCCAGGGAGAAAAGTGCATGGGTGTGATGAGTG...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGATGGTGAAAGAGGCCTaGTTTCTGGCAAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVITQSTCSFVTSLMMSKMVKEA*FLAKGF Trigger: AAAGCCTTTTGCCAGAAAGCAGGCCTCTTTCACCAT...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACCTGTTCTTCAGTTTaGACTGAGGCCCGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNIYGLVTAKAEMSPQSITCSSV*TEARYP Trigger: AGGATACCGGGCCTCAGTCCAAACTGAAGAACAGGT...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGATGCACTTTTCTCCCTaGACAGATGCTCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVITQSTCSFVTSLMMSKMHFSP*TDALVF Trigger: AAACACCAGAGCATCTGTCCAGGGAGAAAAGTGCAT...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCATTAAGTGCTGACCACTaGCCAAAAGCCCTGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSLSADH*PKALPH Trigger: ATGTGGCAGGGCTTTTGGCCAGTGGTCAGCACTTAA...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATGGTGAAAGAGGCCTaGTTTCTGGCAAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTMVKEA*FLAKGF Trigger: AAAGCCTTTTGCCAGAAAGCAGGCCTCTTTCACCAT...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACATCCAAAAGTCCACCCTaGTTCTTACAGACCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTSKSPP*FLQTLV Trigger: TACCAAGGTCTGTAAGAACCAGGGTGGACTTTTGGA...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CCA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACATCATTACGCAGAGGCTaGCTGTCTTCATGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: YGLVTAKAEMSPQSITNTSLRRG*LSSWEI Trigger: TATTTCCCATGAAGACAGCCAGCCTCTGCGTAATGA...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTATGGTGAAAGAGGCCTaGTTTCTGGCAAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNIYGLVTAKAEMSPQSIMVKEA*FLAKGF Trigger: AAAGCCTTTTGCCAGAAAGCAGGCCTCTTTCACCAT...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | AGTCTGTGGCAGGGTCGTCATTTGGATATGGAAAGTTaGATTCTGAGGTACTATGTGTACAACATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWQGRHLDMES*ILRYYVYNISC Trigger: ACAAGAAATGTTGTACACATAGTACCTCAGAATCAAACTTTCCATATCCAAATGACGACCCTGCCACAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGGTAGCAAAACTGTCTaGAGTATTTTCGGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSGSKTV*SIFGRR Trigger: ACGTCTTCCGAAAATACTTCAGACAGTTTTGCTACC...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTGGTAGCAAAACTGTCTaGAGTATTTTCGGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SNIYGLVTAKAEMSPQSIGSKTV*SIFGRR Trigger: ACGTCTTCCGAAAATACTTCAGACAGTTTTGCTACC...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAATGTTCTAAGAAATCTGGAGTTAGACTTCCTCCACAGCCACACACAATCCTATCTTGTCTGGTaGTATACTTACATTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVNVLRNLELDFLHSHTQSYLVW*YTYILP Trigger: AGGAAGAATGTAAGTATACCACCAGACAAGATAGGA...TTGTGTGTGGCTGTGGAGGAAGTCTAACTCCAGATTTCTTAGAACATTTACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCATCCTATCTTGTCTGGTaGTATACTTACATTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLKCHHKALQIQYSSSSYLVW*YTYILP Trigger: AGGAAGAATGTAAGTATACCACCAGACAAGATAGGA...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | ATTAATCTGCTCACATTAATCTGTTCAGTAGATTCTTaGTCCTGTGTCTACAACCCAATGTTAGGTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: INLLTLICSVDS*SCVYNPMLGES Trigger: TGATTCACCTAACATTGGGTTGTAGACACAGGACAAAGAATCTACTGAACAGATTAATGTGAGCAGATTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| 3UTR CAA 72 bp | AAGTTTGATTCTGAGGTACTATGTGTACAACATTTCTaGTTCCATCATCATCATCCTGAGATAAAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KFDSEVLCVQHF*FHHHHPEIKAM Trigger: CATTGCCTTTATCTCAGGATGATGATGATGGAACAAGAAATGTTGTACACATAGTACCTCAGAATCAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS GCA 90 bp | AGAGTGACATTCCTGGGCTCATTGCCAGTCTCAACACCTGAAACTTaGTCCTCCTGGGCTTCACGGCCTGCAAGTTCACACCCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVTFLGSLPVSTPET*SSWASRPASSHPGL Trigger: CAAGCCTGGGTGTGAACTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGGCTGTTGTGAGCCTCCATGTGGGTGCCAGTTTTCTGCAAGAAAAGAGCCAGTGTGGACCACCTaGTGTCGAATAAGAACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTGCCEPPCGCQFSARKEPVWTT*CRIRTV Trigger: GACTGTTCTTATTCGACACAAGGTGGTCCACACTGG...CTCTTTTCTTGCAGAAAACTGGCACCCACATGGAGGCTCACAACAGCCTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS CCA 90 bp | CCACACTCATCACACCCATGCACTTTTCTCCCTGGACAGATGCTCTaGTGTTTAGCGTACTCTGAGTTCGCAGGAGAATTTACACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PHSSHPCTFLPGQML*CLAYSEFAGEFTPF Trigger: AAATGGTGTAAATTCTCCTGCGAACTCAGAGTACGCTAAACACCAGAGCATCTGTCCAGGGAGAAAAGTGCATGGGTGTGATGAGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS TCA 90 bp | ATGCACTTTTCTCCCTGGACAGATGCTCTGGTGTTTAGCGTACTCTaGGTTCGCAGGAGAATTTACACCATTTTCATTACGCAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MHFSPWTDALVFSVL*VRRRIYTIFITQRL Trigger: CAGCCTCTGCGTAATGAAAATGGTGTAAATTCTCCTGCGAACTCAGAGTACGCTAAACACCAGAGCATCTGTCCAGGGAGAAAAGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS CCA 90 bp | TCTGAGTTCGCAGGAGAATTTACACCATTTTCATTACGCAGAGGCTaGCTGTCTTCATGGGAAATACCAGAAGACTCTTCTCCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEFAGEFTPFSLRRG*LSSWEIPEDSSPGL Trigger: CAACCCTGGAGAAGAGTCTTCTGGTATTTCCCATGAAGACAGCCAGCCTCTGCGTAATGAAAATGGTGTAAATTCTCCTGCGAACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | AAACAACTCTCTAGTAGGCTGGCTTCCAAACTACCTGCACTCTTGCTTCTGCTCTGGTTCTTACAGACCTaGGTATCACTAGTAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQLSSRLASKLPALLLLLWFLQT*VSLVDV Trigger: GACATCTACTAGTGATACCAAGGTCTGTAAGAACCA...GAGCAGAAGCAAGAGTGCAGGTAGTTTGGAAGCCAGCCTACTAGAGAGTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTATTTATGTGTAGGAGTGGTTTGCCTGCATGTACATACACACTTGTCACATTCCTGGGCTCATaGCCAGTCTCAACACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SALFMCRSGLPACTYTLVTFLGS*PVSTPE Trigger: TTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGT...GACAAGTGTGTATGTACATGCAGGCAAACCACTCCTACACATAAATAGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGACATTCCTGGGCTCATaGCCAGTCTCAACACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VVITQSTCSFVTSLMMSKTFLGS*PVSTPE Trigger: TTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGT...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGAGCTCATCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCAGTGTGGACCACCTaGTGTCGAATAAGAACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSNIYGLVTAKAEMSPVWTT*CRIRTV Trigger: GACTGTTCTTATTCGACACAAGGTGGTCCACACTGG...TGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGATGAGCTCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053293.14 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAACATTCCTGGGCTCATaGCCAGTCTCAACACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YGLVTAKAEMSPQSITNTTFLGS*PVSTPE Trigger: TTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGT...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CAA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACACCAGTGTGGACCACCTaGTGTCGAATAAGAACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YGLVTAKAEMSPQSITNTPVWTT*CRIRTV Trigger: GACTGTTCTTATTCGACACAAGGTGGTCCACACTGG...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CAA 90 bp | GTAGTCATCACACAGAGTACTTGCTCTTTTGTGACTAGTCTGATGATGAGTAAGCTGAATAGGACCACTTaGAGTGAAGGGTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVITQSTCSFVTSLMMSKLNRTT*SEGFLL Trigger: AAGGAGAAACCCTTCACTCAAAGTGGTCCTATTCAG...CTTACTCATCATCAGACTAGTCACAAAAGAGCAAGTACTCTGTGTGATGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAAATGTTCTAAGAAATCTGGAGTTAGACTTCCTCCACAGCCACACACAACTGAATAGGACCACTTaGAGTGAAGGGTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVNVLRNLELDFLHSHTQLNRTT*SEGFLL Trigger: AAGGAGAAACCCTTCACTCAAAGTGGTCCTATTCAG...TTGTGTGTGGCTGTGGAGGAAGTCTAACTCCAGATTTCTTAGAACATTTACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | TGTCACCACAAAGCATTACAAATACAATACTCTTCATCAGCCGACACCGTGAGGCTCTCCGGTATGAATTaGTTCGTGTTCTATAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: CHHKALQIQYSSSADTVRLSGMN*FVFYKT Trigger: AGTCTTATAGAACACGAACAAATTCATACCGGAGAG...CCTCACGGTGTCGGCTGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | TATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACACTGAATAGGACCACTTaGAGTGAAGGGTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YGLVTAKAEMSPQSITNTLNRTT*SEGFLL Trigger: AAGGAGAAACCCTTCACTCAAAGTGGTCCTATTCAG...TGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | TCAAATATTTATGGTCTCGTAACAGCAAAGGCTGAAATGTCACCACAAAGCATTTGGTTCTTACAGACCTaGGTATCACTAGTAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SNIYGLVTAKAEMSPQSIWFLQT*VSLVDV Trigger: GACATCTACTAGTGATACCAAGGTCTGTAAGAACCA...AATGCTTTGTGGTGACATTTCAGCCTTTGCTGTTACGAGACCATAAATATTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAAGGCTGAAATGTCACCACAAAGCATTACAAATACAATACTCTTCATCACTCTCCGGTATGAATTaGTTCGTGTTCTATAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: QQRLKCHHKALQIQYSSSLSGMN*FVFYKT Trigger: AGTCTTATAGAACACGAACAAATTCATACCGGAGAG...TGATGAAGAGTATTGTATTTGTAATGCTTTGTGGTGACATTTCAGCCTTTGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS CAA 90 bp | GTCCCTTCCCAGAGGCCTTGCTTTAGAGTGACATTCCTGGGCTCATaGCCAGTCTCAACACCTGAAACTTGCTCCTCCTGGGCTTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: VPSQRPCFRVTFLGS*PVSTPETCSSWASR Trigger: CCGTGAAGCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGTCACTCTAAAGCAAGGCCTCTGGGAAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS TCA 72 bp | AGTGACATTCCTGGGCTCATTGCCAGTCTCAACACCTaGAACTTGCTCCTCCTGGGCTTCACGGCCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SDIPGLIASLNT*NLLLLGFTACK Trigger: CTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS TCA 72 bp | CTGCTTCCGTCCCTTCCCAGAGGCCTTGCTTTAGAGTaGCATTCCTGGGCTCATTGCCAGTCTCAACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPSLPRGLALE*HSWAHCQSQHL Trigger: CAGGTGTTGAGACTGGCAATGAGCCCAGGAATGTCACTCTAAAGCAAGGCCTCTGGGAAGGGACGGAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS CCA 72 bp | TCATTGCCAGTCTCAACACCTGAAACTTGCTCCTCCTaGGCTTCACGGCCTGCAAGTTCACACCCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPVSTPETCSS*ASRPASSHPGL Trigger: CAAGCCTGGGTGTGAACTTGCAGGCCGTGAAGCCCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS GCA 72 bp | GGATTCTGTTCTGCTTCCGTCCCTTCCCAGAGGCCTTaGTTTAGAGTGACATTCCTGGGCTCATTGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFCSASVPSQRP*FRVTFLGSLPV Trigger: GACTGGCAATGAGCCCAGGAATGTCACTCTAAAGCAAGGCCTCTGGGAAGGGACGGAAGCAGAACAGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS TCA 72 bp | CCTGCAAGTTCACACCCAGGCTTGGCTTTGACAAACTaGAGGGACACGCTGGGTTTCTGCTCTGTTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PASSHPGLALTN*RDTLGFCSVAK Trigger: TTTGGCAACAGAGCAGAAACCCAGCGTGTCCCTTCAGTTTGTCAAAGCCAAGCCTGGGTGTGAACTTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS CAA 72 bp | CAGAGGCCTTGCTTTAGAGTGACATTCCTGGGCTCATaGCCAGTCTCAACACCTGAAACTTGCTCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QRPCFRVTFLGS*PVSTPETCSSW Trigger: CCAGGAGGAGCAAGTTTCAGGTGTTGAGACTGGCAATGAGCCCAGGAATGTCACTCTAAAGCAAGGCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS GCA 72 bp | GACAAACTGAAGGGACACGCTGGGTTTCTGCTCTGTTaGCAAAGGCTTCACCTCCTGAAACGTTACCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DKLKGHAGFLLC*QRLHLLKRYLF Trigger: GAACAGGTAACGTTTCAGGAGGTGAAGCCTTTGGCAACAGAGCAGAAACCCAGCGTGTCCCTTCAGTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS TCA 72 bp | TCTCCCTGGACAGATGCTCTGGTGTTTAGCGTACTCTaGGTTCGCAGGAGAATTTACACCATTTTCATTACG | + |
|
Preference number: 6 (lower is better) Translates to: SPWTDALVFSVL*VRRRIYTIFIT Trigger: CGTAATGAAAATGGTGTAAATTCTCCTGCGAACTCAGAGTACGCTAAACACCAGAGCATCTGTCCAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
||
| CDS CCA 72 bp | GCAGGAGAATTTACACCATTTTCATTACGCAGAGGCTaGCTGTCTTCATGGGAAATACCAGAAGACTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AGEFTPFSLRRG*LSSWEIPEDSS Trigger: AGAAGAGTCTTCTGGTATTTCCCATGAAGACAGCCAGCCTCTGCGTAATGAAAATGGTGTAAATTCTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053293.14 ENSMUST00000099720.3 ENSMUST00000225545.2 |
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