Pregenerated sensors for ZRSR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031370Ensembl transcript IDs: ENSMUST00000090840.10, ENSMUST00000112289.9, ENSMUST00000127370.3, ENSMUST00000147928.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAGGCAGTGCTCAAACAATGCTACCAACAATGAGCAATGGAACTaGCGTCTGAGACACGACCTGATTGTGGAAATTGCTGCCACCTTT | + |
|
Preference number: 1 (lower is better) Translates to: ERQCSNNATNNEQWN*RLRHDLIVEIAATF Trigger: AAAGGTGGCAGCAATTTCCACAATCAGGTCGTGTCTCAGACGGCAGTTCCATTGCTCATTGTTGGTAGCATTGTTTGAGCACTGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 90 bp | CCTAAGAGTGGGAACGGGTGTATCTCTGACTCTTTAGCCTATTCTTaGGACTCTTTTCCTCCTATTCACTTGCCTTGTCCAGCCTCAATA | + |
|
Preference number: 1 (lower is better) Translates to: PKSGNGCISDSLAYS*DSFPPIHLPCPASI Trigger: TATTGAGGCTGGACAAGGCAAGTGAATAGGAGGAAAAGAGTCTCAAGAATAGGCTAAAGAGTCAGAGATACACCCGTTCCCACTCTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 90 bp | GAAGAACTCAACACATATATGACAGAACCAGAGGAAACTAACACTTaGCACAGAGTGGTACAGAGTGTAAAACAGGGCAGCTGCCCAGTT | + |
|
Preference number: 1 (lower is better) Translates to: EELNTYMTEPEETNT*HRVVQSVKQGSCPV Trigger: AACTGGGCAGCTGCCCTGTTTTACACTCTGTACCACTCTGTGGCAAGTGTTAGTTTCCTCTGGTTCTGTCATATATGTGTTGAGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 90 bp | TACTACAACACAGCCACATCCATTCATATACATGTTATCTATGTCTaGTTTAGGGTACACTGGCAGACCTGGATGTCCACAGAAGCCATA | + |
|
Preference number: 1 (lower is better) Translates to: YYNTATSIHIHVIYV*FRVHWQTWMSTEAI Trigger: TATGGCTTCTGTGGACATCCAGGTCTGCCAGTGTACCCTAAAGCAGACATAGATAACATGTATATGAATGGATGTGGCTGTGTTGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR CCA 90 bp | ACATCCATTCATATACATGTTATCTATGTCTGCTTTAGGGTACACTaGCAGACCTGGATGTCCACAGAAGCCATACAGATATCACAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: TSIHIHVIYVCFRVH*QTWMSTEAIQISQP Trigger: AGGCTGTGATATCTGTATGGCTTCTGTGGACATCCAGGTCTGCCAGTGTACCCTAAAGCAGACATAGATAACATGTATATGAATGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 90 bp | AATACGTACAAAGTTAGGTTCCTTAGCGCCTCAAAACCATACATATaGCTGTTTAGCTTACTTGGTAAGTATCTCTCGTTCTGGCAACTT | + |
|
Preference number: 1 (lower is better) Translates to: NTYKVRFLSASKPYI*LFSLLGKYLSFWQL Trigger: AAGTTGCCAGAACGAGAGATACTTACCAAGTAAGCTAAACAGTCATATGTATGGTTTTGAGGCGCTAAGGAACCTAACTTTGTACGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCAAACATGGCTTCGGTTCCCTTTCCTTCTTCCTCCCATAGAATTTGCCAGCTGGGCTCACAGGCCTaGAGTGGCAAGTACAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PSNMASVPFPSSSHRICQLGSQA*SGKYRA Trigger: AGCCCTGTACTTGCCACTTCAGGCCTGTGAGCCCAG...CTGGCAAATTCTATGGGAGGAAGAAGGAAAGGGAACCGAAGCCATGTTTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | TTACCCTCAGCCCCTCCCATCCAGAAGTCACTCAAGGAGAACCAAGACTCTGCTAGGCAAGCCCTGACATaGCCACTGGTGAATCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LPSAPPIQKSLKENQDSARQALT*PLVNLQ Trigger: TTGCAGATTCACCAGTGGGCATGTCAGGGCTTGCCT...AGCAGAGTCTTGGTTCTCCTTGAGTGACTTCTGGATGGGAGGGGCTGAGGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGCCTTTGCCTCCTTCTGCAAATCCAGCTAGTAGGCACCATCACAGCCTGTGTCTCCCATGCTCTTaGTCTAGTCTCCTGTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLPLPPSANPASRHHHSLCLPCS*SSLLWS Trigger: AGACCACAGGAGACTAGAGCAAGAGCATGGGAGACA...CAGGCTGTGATGGTGCCTACTAGCTGGATTTGCAGAAGGAGGCAAAGGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR CAA 90 bp | AAAGCAAACTCCTTTCCATCTAAGAAGCTTGTAACCCTCCTGCCTTaGCCTCCTTCTGCAAATCCAGCTAGTAGGCACCATCACAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KANSFPSKKLVTLLP*PPSANPASRHHHSL Trigger: CAGGCTGTGATGGTGCCTACTAGCTGGATTTGCAGAAGGAGGCAAAGGCAGGAGGGTTACAAGCTTCTTAGATGGAAAGGAGTTTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR CAA 90 bp | TCACAATCATCTATAATTCTGCTCCAGGCGGATCTGGCATACTCTTaGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: SQSSIILLQADLAYS*ASTDTGLPNVAHRY Trigger: GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGCCAGATCCGCCTGGAGCAGAATTATAGATGATTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATGTGAGTAAAGGTCCTTaGTGTAAAAGCTTCACCTCG | + |
|
Preference number: 2 (lower is better) Translates to: WHTLWPPRTLGSQMLHIDVSKGP*CKSFTS Trigger: CGAGGTGAAGCTTTTACACCAAGGACCTTTACTCAC...ATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGCCTTTGCCTCCTTCTGCAAATCCAGCTAGTAGGCACCATCACAGCCTGAATCTATTTCAATTATaGTCTGCCCCTTCTGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLPLPPSANPASRHHHSLNLFQL*SAPSDP Trigger: AGGATCAGAAGGGGCAGATCATAATTGAAATAGATT...CAGGCTGTGATGGTGCCTACTAGCTGGATTTGCAGAAGGAGGCAAAGGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCAAACATGGCTTCGGTTCCCTTTCCTTCTTCCTCCCATAGAATTTGCCAGTGTTGCCTATCTGTTTaGAGGTCTGACCTCATCATT | + |
|
Preference number: 2 (lower is better) Translates to: PSNMASVPFPSSSHRICQCCLSV*RSDLII Trigger: AATGATGAGGTCAGACCTTCAAACAGATAGGCAACA...CTGGCAAATTCTATGGGAGGAAGAAGGAAAGGGAACCGAAGCCATGTTTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTTGGTTGGGAGTTAAGAGATCAAACCCAAGATTCTACTTTTACCACTCTGACATCACTTCCTCAGTaGCTTCCTTGGCCAGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: SFGWELRDQTQDSTFTTLTSLPQ*LPWPAI Trigger: AATTGCTGGCCAAGGAAGTCACTGAGGAAGTGATGT...CAGAGTGGTAAAAGTAGAATCTTGGGTTTGATCTCTTAACTCCCAACCAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR CCA 90 bp | TCACTCAAGGAGAACCAAGACTCTGCTTTTCACTGCTTTTTCTTGTATTTGTCTACCAACAATGAGCAATaGAACTGCCGTCTGAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: SLKENQDSAFHCFFLYLSTNNEQ*NCRLRH Trigger: GTGTCTCAGACGGCAGTTCCATTGCTCATTGTTGGT...AGACAAATACAAGAAAAAGCAGTGAAAAGCAGAGTCTTGGTTCTCCTTGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCACACTCAGTTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTTGGCGCCTTAGCTTTTACCTaGTCCCTAGAAGTTAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SPHSVNYLKHHFLSDFLGALAFT*SLEVKE Trigger: TTCTTTAACTTCTAGGGATCAGGTAAAAGCTAAGGC...GCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAACTGAGTGTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | AACACAGCCACATCCATTCATATACATGTTATCTATGTCTGCTTTAGGGTACACCTTTACATGCACACGTaGACACCAAGAAGATACGCA | + |
|
Preference number: 2 (lower is better) Translates to: NTATSIHIHVIYVCFRVHLYMHT*TPRRYA Trigger: TGCGTATCTTCTTGGTGTGCACGTGTGCATGTAAAG...GTGTACCCTAAAGCAGACATAGATAACATGTATATGAATGGATGTGGCTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | CCATACATCTCTCCTCATTTTAAGATGAGTGACTATGGAATGTCGTGCCATTCATGCAAACTCTTTACATaGACACGTGCACACCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PYISPHFKMSDYGMSCHSCKLFT*TRAHQE Trigger: TTCTTGGTGTGCACGTGTGCATGTAAAGAGTTTGCA...TGAATGGCACGACATTCCATAGTCACTCATCTTAAAATGAGGAGAGATGTATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | TCACTCAAGGAGAACCAAGACTCTGCTTTTCACTGCTTTTTCTTGTATTTGTCTGTAAAACAGGGCAGCTaGCCAGTTTACAGAGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SLKENQDSAFHCFFLYLSVKQGS*PVYRDV Trigger: AACATCTCTGTAAACTGGGCAGCTGCCCTGTTTTAC...AGACAAATACAAGAAAAAGCAGTGAAAAGCAGAGTCTTGGTTCTCCTTGAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | CCATACATCTCTCCTCATTTTAAGATGAGTGACTATGGAATGTCGTGCCATTCACTGACTCCTTCCAAATaGACAGAACATGAGCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PYISPHFKMSDYGMSCHSLTPSK*TEHEQN Trigger: ATTTTGCTCATGTTCTGTTCATTTGGAAGGAGTCAG...TGAATGGCACGACATTCCATAGTCACTCATCTTAAAATGAGGAGAGATGTATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | GTAGACAGAGGGGAAACTGTGGTCAGGATGTATAAGAGGAGAATCTATTTCAATGTTTCTAACAAAAACTaGCTCCTTCCAAATGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: VDRGETVVRMYKRRIYFNVSNKN*LLPNEQ Trigger: CTGTTCATTTGGAAGGAGTCAGTTTTTGTTAGAAAC...ATTGAAATAGATTCTCCTCTTATACATCCTGACCACAGTTTCCCCTCTGTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | TCACTCAAGGAGAACCAAGACTCTGCTTTTCACTGCTTTTTCTTGTATTTGTCTTCATTTTACCCACTTTaGCTTAACCAAGCTCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLKENQDSAFHCFFLYLSSFYPL*LNQAPF Trigger: AAAGGGAGCTTGGTTAAGGCAAAGTGGGTAAAATGA...AGACAAATACAAGAAAAAGCAGTGAAAAGCAGAGTCTTGGTTCTCCTTGAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCACTTCCTCAGTGACTTCCTTGGCCAGCAATTCAAATAAGTATCTTGACTCCAAGAGGAGAACCATTTaGAAACTAGTGTTTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ITSSVTSLASNSNKYLDSKRRTI*KLVFPN Trigger: ATTTGGAAACACTAGTTTCCAAATGGTTCTCCTCTT...GGAGTCAAGATACTTATTTGAATTGCTGGCCAAGGAAGTCACTGAGGAAGTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR TCA 90 bp | GCACATAGATACATGCAGGCAAAACACCCATATACATTAAGCAGAAATAAAGGGATCACATTGTATAAATaGCCCCTAAAAGTTGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AHRYMQAKHPYTLSRNKGITLYK*PLKVVL Trigger: GAGGACAACTTTTAGGGGTCATTTATACAATGTGAT...CCCTTTATTTCTGCTTAATGTATATGGGTGTTTTGCCTGCATGTATCTATGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR CAA 90 bp | CACACTCAGTTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTaGGCCAGCAATTCAAATAAGTATCTTGACTCCTATTATTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: HTQLIISNITSSVTS*ASNSNKYLDSYYSI Trigger: GATAGAATAATAGGAGTCAAGATACTTATTTGAATTGCTGGCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAACTGAGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTTGGTTGGGAGTTAAGAGATCAAACCCAAGATTCTACTTTTACCACTCTGAGGCAAGATGAGCTGTaGATGTTATATTTGAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SFGWELRDQTQDSTFTTLRQDEL*MLYLKQ Trigger: TTGTTTCAAATATAACATGCACAGCTCATCTTGCCT...CAGAGTGGTAAAAGTAGAATCTTGGGTTTGATCTCTTAACTCCCAACCAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTTGGTTGGGAGTTAAGAGATCAAACCCAAGATTCTACTTTTACCACTCTGAATATCCTCAGTAACTaGGACAGCCATTTTATCATT | + |
|
Preference number: 2 (lower is better) Translates to: SFGWELRDQTQDSTFTTLNILSN*DSHFII Trigger: AATGATAAAATGGCTGTCGCAGTTACTGAGGATATT...CAGAGTGGTAAAAGTAGAATCTTGGGTTTGATCTCTTAACTCCCAACCAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 72 bp | GCTAGTAGGCACCATCACAGCCTGGGCTCACAGGCCTaGAGTGGCAAGTACAGGGCTTGCATGAGTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASRHHHSLGSQA*SGKYRACMSLL Trigger: AAGCAGACTCATGCAAGCCCTGTACTTGCCACTTCAGGCCTGTGAGCCCAGGCTGTGATGGTGCCTACTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR CCA 72 bp | CTTCTGCAAATCCAGCTAGTAGGCACCATCACAGCCTaGGCTCACAGGCCTGAAGTGGCAAGTACAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLQIQLVGTITA*AHRPEVASTGL Trigger: AAGCCCTGTACTTGCCACTTCAGGCCTGTGAGCCCAGGCTGTGATGGTGCCTACTAGCTGGATTTGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCCTTTGCCTCCTTCTGCAAATCCAGCTAGTAGGCACCATCACAGCCTGCTGTTTGGCTGTCTCTaGGAGGCCTGCTCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLPLPPSANPASRHHHSLLFGCL*EACSFL Trigger: CAGAAAAGAGCAGGCCTCCAAGAGACAGCCAAACAG...CAGGCTGTGATGGTGCCTACTAGCTGGATTTGCAGAAGGAGGCAAAGGCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 72 bp | GCTCACAGGCCTGAAGTGGCAAGTACAGGGCTTGCATaGGTCTGCTTTAGGTCCTCCACGTATGTTACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AHRPEVASTGLA*VCFRSSTYVTA Trigger: AGCTGTAACATACGTGGAGGACCTAAAGCAGACTCATGCAAGCCCTGTACTTGCCACTTCAGGCCTGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAAACATGGCTTCGGTTCCCTTTCCTTCTTCCTCCCATAGAATTTGCCAGGTAACCCTCCTGCCTTaGCCTCCTTCTGCAAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSNMASVPFPSSSHRICQVTLLP*PPSANP Trigger: TGGATTTGCAGAAGGAGGCAAAGGCAGGAGGGTTAC...CTGGCAAATTCTATGGGAGGAAGAAGGAAAGGGAACCGAAGCCATGTTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | TGCCACAGAGTGGTACAGAGTGTAAAACAGGGCAGCTaGCCAGTTTACAGAGATGTTTTACTACAACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CHRVVQSVKQGS*PVYRDVLLQHS Trigger: GCTGTGTTGTAGTAAAACATCTCTGTAAACTGGGCAGCTGCCCTGTTTTACACTCTGTACCACTCTGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR CCA 72 bp | GTTATCTATGTCTGCTTTAGGGTACACTGGCAGACCTaGATGTCCACAGAAGCCATACAGATATCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VIYVCFRVHWQT*MSTEAIQISQP Trigger: AGGCTGTGATATCTGTATGGCTTCTGTGGACATCCAGGTCTGCCAGTGTACCCTAAAGCAGACATAGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | TGCTCAAACAATGCTACCAACAATGAGCAATGGAACTaGCGTCTGAGACACGACCTGATTGTGGAAATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSNNATNNEQWN*RLRHDLIVEIA Trigger: AGCAATTTCCACAATCAGGTCGTGTCTCAGACGGCAGTTCCATTGCTCATTGTTGGTAGCATTGTTTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | ACAGCCACATCCATTCATATACATGTTATCTATGTCTaGTTTAGGGTACACTGGCAGACCTGGATGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TATSIHIHVIYV*FRVHWQTWMST Trigger: TGTGGACATCCAGGTCTGCCAGTGTACCCTAAAGCAGACATAGATAACATGTATATGAATGGATGTGGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | AACACATATATGACAGAACCAGAGGAAACTAACACTTaGCACAGAGTGGTACAGAGTGTAAAACAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NTYMTEPEETNT*HRVVQSVKQGS Trigger: GCTGCCCTGTTTTACACTCTGTACCACTCTGTGGCAAGTGTTAGTTTCCTCTGGTTCTGTCATATATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | AGGGAGAGAAGCATGTTAGAAAAGGACATTAGCATGTaGCCTAGAGCGAGCACAGGTTTCTCAGAATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RERSMLEKDISM*PRASTGFSEFL Trigger: AAGAAATTCTGAGAAACCTGTGCTCGCTCTAGGGCACATGCTAATGTCCTTTTCTAACATGCTTCTCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR GCA 72 bp | ACATCCCATCTGGATAGTGACTCATCTGAAAGGCAGTaGTCAAACAATGCTACCAACAATGAGCAATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TSHLDSDSSERQ*SNNATNNEQWN Trigger: GTTCCATTGCTCATTGTTGGTAGCATTGTTTGAGCACTGCCTTTCAGATGAGTCACTATCCAGATGGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACACTCAGTTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTTGGCCAAGAGGAGAACCATTaGGAAACTAGTGTTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPHSVNYLKHHFLSDFLGQEENH*ETSVSK Trigger: TTTGGAAACACTAGTTTCCAAATGGTTCTCCTCTTG...GCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAACTGAGTGTGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 72 bp | AAAGTTAGGTTCCTTAGCGCCTCAAAACCATACATATaGCTGTTTAGCTTACTTGGTAAGTATCTCTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KVRFLSASKPYI*LFSLLGKYLSF Trigger: GAACGAGAGATACTTACCAAGTAAGCTAAACAGTCATATGTATGGTTTTGAGGCGCTAAGGAACCTAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| 3UTR TCA 72 bp | AGTAGGTTTAGAACTTTTCACAATACTGTTCTTCCGTaGAGAACTCAACACATATATGACAGAACCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SRFRTFHNTVLP*RTQHIYDRTRG Trigger: TCCTCTGGTTCTGTCATATATGTGTTGAGTTCTTCACGGAAGAACAGTATTGTGAAAAGTTCTAAACCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAATCCTGCTCCGGCCCCTaGTCCTGCTCCGGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERGGKERWREGERCTGRKSCSGP*SCSGSG Trigger: GCCGGAGCCGGAGCAGGAGCAGGGGCCGGAGCAGGA...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAAGGCTGCGGCTGCGACTaGGACTCCTGCTGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERGGKERWREGERCTGRKGCGCD*DSCCGG Trigger: GCCACCGCAGCAGGAGTCGCAGTCGCAGCCGCAGCC...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAAGGCTGCGGCTGCGGCTaGGACTGCGACTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERGGKERWREGERCTGRKGCGCG*DCDSCC Trigger: GCAGCAGGAGTCGCAGTCGCAGCCGCAGCCGCAGCC...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | TGGCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATTCCGGCCCCTGCTCCTaGTCCGGCTCCGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WHTLWPPRTLGSQMLHIDSGPCS*SGSGSC Trigger: GCAGGAGCCGGAGCCGGAGCAGGAGCAGGGGCCGGA...ATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | CAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATCTGTGCGGTGGCTCCTCCTaGTCTGGCTCCAGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDPHDSSQSSIILLQADLCGGSS*SGSRGP Trigger: CGGGCCCCTGGAGCCAGAGCAGGAGGAGCCACCGCA...CAGATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATGACTGCGGCTGCGGCTaGGGCTGCGACTGCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQDPHDSSQSSIILLQADDCGCG*GCDCDS Trigger: GGAGTCGCAGTCGCAGCCGCAGCCGCAGCCGCAGTC...ATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAACTGGGTTCTGCCAGGTaGCACCATTTTCCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERGGKERWREGERCTGRKLGSAR*HHFPAH Trigger: ATGAGCTGGAAAATGGTGGCACCTGGCAGAACCCAG...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATGACTGCGACTCCTGCTaGGGTGGCTCCTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQDPHDSSQSSIILLQADDCDSC*GGSSCS Trigger: AGAGCAGGAGGAGCCACCGCAGCAGGAGTCGCAGTC...ATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | GCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACCAGGGGCCCGGACTGTaGTCCTTTCTTCTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: AYSLASTDTGLPNVAHRYQGPGL*SFLLLL Trigger: CAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCCTG...GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR CAA 72 bp | TCTATAATTCTGCTCCAGGCGGATCTGGCATACTCTTaGGCCTCCACGGACACTGGGCTCCCAAATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIILLQADLAYS*ASTDTGLPNVA Trigger: TGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGCCAGATCCGCCTGGAGCAGAATTATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | ATTACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGGCTACGGGTCCGACTaGGGCTGCGGCTGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITSNFMCVCVCVCVCVCIGYGSD*GCGCGC Trigger: GCAGCCGCAGCCGCAGCCGCAGTCGGACCCGTAGCC...TATACACACACACACACACACACACACACACACACACATGAAATTACTTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGCAAAACACCCATATACATTAAGCAGAAATAAAGGGTGTGGACCCCTACGACTCCTGCTGCGGTaGCTCCTCCTGCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MQAKHPYTLSRNKGCGPLRLLLR*LLLLWL Trigger: GAGCCAGAGCAGGAGGAGCCACCGCAGCAGGAGTCG...TAGGGGTCCACACCCTTTATTTCTGCTTAATGTATATGGGTGTTTTGCCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAACAGCTGACCTTAAACTaGATCACTTTTCCCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ERGGKERWREGERCTGRKQLTLN*ITFPTL Trigger: GAGTGTGGGAAAAGTGATTCAGTTTAAGGTCAGCTG...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | GCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACTTTGTCTCTACTACCTaGCCTCCTGCCACGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYSLASTDTGLPNVAHRYFVSTT*PPATTS Trigger: AGAAGTCGTGGCAGGAGGTCAGGTAGTAGAGACAAA...GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | GCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACAGGTGGGACTTGATGTaGGGAAGTTGTGTTTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYSLASTDTGLPNVAHRYRWDLM*GSCVYV Trigger: CACGTAAACACAACTTCCCCACATCAAGTCCCACCT...GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACATGCGCAGTGCTTTCCTCTTaGACACTGCTGGACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLWPPRTLGSQMLHIDTCAVLSS*TLLDFK Trigger: TTTGAAGTCCAGCAGTGTCCAAGAGGAAAGCACTGC...GCATGTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | ATTACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGGCTCCTCCTGCTCTaGCTCCAGGGGCCCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ITSNFMCVCVCVCVCVCIWLLLL*LQGPGL Trigger: CAGTCCGGGCCCCTGGAGCCAGAGCAGGAGGAGCCA...TATACACACACACACACACACACACACACACACACACATGAAATTACTTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | CAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATCTGCAGCAAGGTGGGACTTaGTGTGGGGAAGTTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDPHDSSQSSIILLQADLQQGGT*CGEVVF Trigger: AAACACAACTTCCCCACATCAAGTCCCACCTTGCTG...CAGATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR CAA 72 bp | ACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTaGCACATAGATACATGCAGGCAAAACACCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: TLWPPRTLGSQM*HIDTCRQNTHI Trigger: TATATGGGTGTTTTGCCTGCATGTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATCCTTTCCCTCCTCTCTaGATTCTTACCGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQDPHDSSQSSIILLQADPFPPL*ILTEGG Trigger: TCCTCCTTCGGTAAGAATTCAGAGAGGAGGGAAAGG...ATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATTTCTCTTGTCGTTTCTaGTCCTCTTCCTCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQDPHDSSQSSIILLQADFSCRF*SSSSRS Trigger: AGAGCGAGAGGAAGAGGAGCAGAAACGACAAGAGAA...ATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CCA 90 bp | GCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACTTAGATTTGGGACTCTaGGTGGTTTTGTCTCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: AYSLASTDTGLPNVAHRYLDLGL*VVLSLL Trigger: TAGTAGAGACAAAACCACCCAGAGTCCCAAATCTAA...GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATTTTTCTTCTTTGCCCTaGATTCTTCTTGTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WHTLWPPRTLGSQMLHIDFSSLP*ILLVPF Trigger: AAAAGGCACAAGAAGAATTCAGGGCAAAGAAGAAAA...ATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGACCCACATGACAGTTCACAATCATCTATAATTCTGCTCCAGGCGGATCTTTTCCCACACTCTTaGATTCAGGCAGGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQDPHDSSQSSIILLQADLFPHS*IQAGHH Trigger: ATGATGTCCTGCCTGAATTCAAGAGTGTGGGAAAAG...ATCCGCCTGGAGCAGAATTATAGATGATTGTGAACTGTCATGTGGGTCCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | ATCACTTCCTCAGTGACTTCCTTGGCCAGCAATTCAAATAAGTATCTTGACTCCTTCTCTTGTCGTTTCTaGTCCTCTTCCTCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSSVTSLASNSNKYLDSFSCRF*SSSSRS Trigger: AGAGCGAGAGGAAGAGGAGCAGAAACGACAAGAGAA...GGAGTCAAGATACTTATTTGAATTGCTGGCCAAGGAAGTCACTGAGGAAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR GCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTTTTGACTCCAACTCCTaGTCTGGTTCCTGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIIFDSNS*SGSCPC Trigger: GCAGGGGCAGGAACCAGAGCAGGAGTTGGAGTCAAA...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTCCTCCTCCTCCTCCTTaGCCTGCCATAGTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIIPPPPP*PAIVFI Trigger: GATGAATACTATGGCAGGTCAAGGAGGAGGAGGAGG...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCACACTCAGTTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTTGGCTCTTCATGCAGTCTCTaGCTCTCTTCCTCTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPHSVNYLKHHFLSDFLGSSCSL*LSSSNN Trigger: GTTGTTAGAGGAAGAGAGGCAGAGACTGCATGAAGA...GCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAACTGAGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR GCA 90 bp | AACACAGCCACATCCATTCATATACATGTTATCTATGTCTGCTTTAGGGTACACTCTCGCTCTTTTCTCTaGTGTTCTTCCCATTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTATSIHIHVIYVCFRVHSRSFL*CSSHSA Trigger: GGCAGAATGGGAAGAACAGCAGAGAAAAGAGCGAGA...GTGTACCCTAAAGCAGACATAGATAACATGTATATGAATGGATGTGGCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGGTTGGGAGTTAAGAGATCAAACCCAAGATTCTACTTTTACCACTCTGAGTAACCATTCTTCATaGAGTCTCTGCCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFGWELRDQTQDSTFTTLSNHSS*SLCLSS Trigger: GGAAGAGAGGCAGAGACTGCATGAAGAATGGTTACT...CAGAGTGGTAAAAGTAGAATCTTGGGTTTGATCTCTTAACTCCCAACCAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR CCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTATTCATCATAGTGACTaGCCCTTTCCCTCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIIIHHSD*PFPSSL Trigger: CAGAGAGGAGGGAAAGGGCCAGTCACTATGATGAAT...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTTCTTCATGCAGTCTCTaGCTCTCTTCCTCTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIISSCSL*LSSSNN Trigger: GTTGTTAGAGGAAGAGAGGCAGAGACTGCATGAAGA...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTAGTAACCATTCTTCATaGAGTCTCTGCCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIISNHSS*SLCLSS Trigger: GGAAGAGAGGCAGAGACTGCATGAAGAATGGTTACT...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTACTGAACATACACATTaGCCCTCAGATGAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIITEHTH*PSDEVP Trigger: TGGAACCTCATCTGAGGGGCAATGTGTATGTTCAGT...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | TCACTCAAGGAGAACCAAGACTCTGCTTTTCACTGCTTTTTCTTGTATTTGTCTTTTTCTTCTTTGCCCTaGATTCTTCTTGTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKENQDSAFHCFFLYLSFSSLP*ILLVPF Trigger: AAAAGGCACAAGAAGAATTCAGGGCAAAGAAGAAAA...AGACAAATACAAGAAAAAGCAGTGAAAAGCAGAGTCTTGGTTCTCCTTGAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR TCA 90 bp | ATTACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAAGTTGTGTTTACGTaGACACCTATCTCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSNFMCVCVCVCVCVCIEVVFT*TPISKS Trigger: AGATTTGGAGATAGGTGTTCACGTAAACACAACTTC...TATACACACACACACACACACACACACACACACACACATGAAATTACTTGTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATTTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATTTTCATTCCATATCTGTaGGATTTCTTCACCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNFMCVCVCVCVCVCIIFIPYL*DFFTLC Trigger: ACACAGGGTGAAGAAATCTCACAGATATGGAATGAA...AATTATACACACACACACACACACACACACACACACACACATGAAATTACTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| 3UTR CAA 72 bp | TTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTaGGCCAGCAATTCAAATAAGTATCTTGACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIISNITSSVTS*ASNSNKYLDSY Trigger: ATAGGAGTCAAGATACTTATTTGAATTGCTGGCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS CCA 90 bp | TGCTCTGGCTCCAGGGGCCCGGACTGTGGTCCTTTCTTCTTCTACTaGGTGAACTGCGCCTCTCACGACTCTTCATTCCATATCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSGSRGPDCGPFFFY*VNCASHDSSFHICE Trigger: CTCACAGATATGGAATGAAGAGTCGTGAGAGGCGCAGTTCACCCAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCCTGGAGCCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CAA 90 bp | GCATACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACACTCCGGCTCCGGCTTaGACTCCAACTCCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYSLASTDTGLPNVAHRYTPAPA*TPTPAL Trigger: CAGAGCAGGAGTTGGAGTCAAAGCCGGAGCCGGAGT...GTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGTATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS GCA 90 bp | TCTTGTAGAAGTCGGGACTCGGGCTCCTCCTCCTCCTCCTTGACCTaGCATAGTATTCATCATAGTGACTGGCCCTTTCCCTCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRSRDSGSSSSSLT*HSIHHSDWPFPSSL Trigger: CAGAGAGGAGGGAAAGGGCCAGTCACTATGATGAATACTATGGCAGGTCAAGGAGGAGGAGGAGGAGCCCGAGTCCCGACTTCTACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS TCA 90 bp | CTGGCTCCAGGGGCCCGGACTGTGGTCCTTTCTTCTTCTACTGGGTaGACTGCGCCTCTCACGACTCTTCATTCCATATCTGTGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LAPGARTVVLSSSTG*TAPLTTLHSISVRF Trigger: AAATCTCACAGATATGGAATGAAGAGTCGTGAGAGGCGCAGTTCACCCAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCCTGGAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAATCAGCAAGGTGGGACTaGATGTGGGGAAGTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ERGGKERWREGERCTGRKSARWD*MWGSCV Trigger: AACACAACTTCCCCACATCAAGTCCCACCTTGCTGA...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS TCA 90 bp | ATTTCTCTTGTAGAAGTCGGGACTCGGGCTCCTCCTCCTCCTCCTTaGCCTGCCATAGTATTCATCATAGTGACTGGCCCTTTCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLVEVGTRAPPPPP*PAIVFIIVTGPFPP Trigger: AGGAGGGAAAGGGCCAGTCACTATGATGAATACTATGGCAGGTCAAGGAGGAGGAGGAGGAGCCCGAGTCCCGACTTCTACAAGAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGGAGGAAAGGAGAGATGGAGGGAGGGGGAGAGGTGCACAGGCAGAAAATCTTTCTCTCTTCTCTaGTCGTTTCTGCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERGGKERWREGERCTGRKSFSLL*SFLLLF Trigger: GAAGAGGAGCAGAAACGACAAGAGAAGAGAGAAAGA...TTTTCTGCCTGTGCACCTCTCCCCCTCCCTCCATCTCTCCTTTCCTCCTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTTTGGCCTCCACGGACACTGGGCTCCCAAATGTTGCACATAGATACATGCACTTTTCCCACACTCTaGAATTCAGGCAGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: TLWPPRTLGSQMLHIDTCTFPTL*NSGRTS Trigger: TGATGTCCTGCCTGAATTCAAGAGTGTGGGAAAAGT...GCATGTATCTATGTGCAACATTTGGGAGCCCAGTGTCCGTGGAGGCCAAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCACACTCAGTTAATTATCTCAAACATCACTTCCTCAGTGACTTCCTTGGCTCTTTCTCTCTTCTCTaGTCGTTTCTGCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPHSVNYLKHHFLSDFLGSFSLL*SFLLLF Trigger: GAAGAGGAGCAGAAACGACAAGAGAAGAGAGAAAGA...GCCAAGGAAGTCACTGAGGAAGTGATGTTTGAGATAATTAACTGAGTGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090840.10 |
||
| CDS-3UTR CAA 90 bp | GCACATAGATACATGCAGGCAAAACACCCATATACATTAAGCAGAAATAAAGGGTCCTCCTCCTCCTCCTaGACCTGCCATAGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHRYMQAKHPYTLSRNKGSSSSS*TCHSIH Trigger: ATGAATACTATGGCAGGTCAAGGAGGAGGAGGAGGA...CCCTTTATTTCTGCTTAATGTATATGGGTGTTTTGCCTGCATGTATCTATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS GCA 72 bp | GGCTGCGACTGCGACTCCTGCTGCGGTGGCTCCTCCTaGTCTGGCTCCAGGGGCCCGGACTGTGGTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCDCDSCCGGSS*SGSRGPDCGPF Trigger: GAAAGGACCACAGTCCGGGCCCCTGGAGCCAGAGCAGGAGGAGCCACCGCAGCAGGAGTCGCAGTCGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS GCA 72 bp | TTCCGGAGGGCCAAGTACTTCTTACGGCTCAGTTTCTaGGGCCCCGCCGTAGCGTCCGCCGTAGCCCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FRRAKYFLRLSF*GPAVASAVAPA Trigger: GGCGGGGGCTACGGCGGACGCTACGGCGGGGCCGCAGAAACTGAGCCGTAAGAAGTACTTGGCCCTCCGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090840.10 ENSMUST00000112289.9 ENSMUST00000127370.3 ENSMUST00000147928.8 |
||
| CDS CCA 72 bp | TGGCTCCTCCTGCTCTGGCTCCAGGGGCCCGGACTGTaGTCCTTTCTTCTTCTACTGGGTGAACTGCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLLLLWLQGPGL*SFLLLLGELRL Trigger: GAGGCGCAGTTCACCCAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCCTGGAGCCAGAGCAGGAGGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS GCA 72 bp | AAGAGGATCTTCTTCCTCCTCTTTCTGTGCCAATTCTaGCTCTCTGAGCCGAGCGAGCGCCTGCCGTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KRIFFLLFLCQF*LSEPSERLPSP Trigger: AGGCGACGGCAGGCGCTCGCTCGGCTCAGAGAGGCAGAATTGGCACAGAAAGAGGAGGAAGAAGATCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090840.10 ENSMUST00000112289.9 ENSMUST00000127370.3 ENSMUST00000147928.8 |
||
| CDS CCA 72 bp | TCCAGGGGCCCGGACTGTGGTCCTTTCTTCTTCTACTaGGTGAACTGCGCCTCTCACGACTCTTCATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGPDCGPFFFY*VNCASHDSSFH Trigger: ATGGAATGAAGAGTCGTGAGAGGCGCAGTTCACCCAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS TCA 72 bp | GGGGCCCGGACTGTGGTCCTTTCTTCTTCTACTGGGTaGACTGCGCCTCTCACGACTCTTCATTCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: GARTVVLSSSTG*TAPLTTLHSIS Trigger: AGATATGGAATGAAGAGTCGTGAGAGGCGCAGTTCACCCAGTAGAAGAAGAAAGGACCACAGTCCGGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS GCA 72 bp | GACTCTGGGTGGTTTTGTCTCTACTACCTGACCTCCTaGCACGACTTCTGGACCTTGACGAGCTACTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSGWFCLYYLTS*HDFWTLTSYYS Trigger: GGAGTAGTAGCTCGTCAAGGTCCAGAAGTCGTGGCAGGAGGTCAGGTAGTAGAGACAAAACCACCCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS CCA 72 bp | ATCTTTCTCCAGTACTCTTATATCCATGGGCGGTTCTaGGTTCTGCCAGGTGCCACCATTTTCCAGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: IFLQYSYIHGRF*VLPGATIFQLI Trigger: AATGAGCTGGAAAATGGTGGCACCTGGCAGAACCCAGAACCGCCCATGGATATAAGAGTACTGGAGAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||
| CDS CCA 72 bp | TCCTCCTTGACCTGCCATAGTATTCATCATAGTGACTaGCCCTTTCCCTCCTCTCTGAATTCTTACCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLTCHSIHHSD*PFPSSLNSYRR Trigger: CCTTCGGTAAGAATTCAGAGAGGAGGGAAAGGGCCAGTCACTATGATGAATACTATGGCAGGTCAAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112289.9 |
||