Pregenerated sensors for ZRSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044068Ensembl transcript IDs: ENSMUST00000049506.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCAAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTaGGGCTCCCATTCTGCCCCTCACTGTATTCGCACCCTTACTGTT | + |
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Preference number: 1 (lower is better) Translates to: LQVQVRHSGCRTDVA*GSHSAPHCIRTLTV Trigger: AACAGTAAGGGTGCGAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR TCA 90 bp | GTTTTCATTGTTTGCTGTTACTGGGGGTCATTAGACCCACAGGCATaGGATGAGCATACTGGCAAGTGCTCTGCAGCTCAGTTACACTCC | + |
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Preference number: 1 (lower is better) Translates to: VFIVCCYWGSLDPQA*DEHTGKCSAAQLHS Trigger: GGAGTGTAACTGAGCTGCAGAGCACTTGCCAGTATGCTCATCTCATGCCTGTGGGTCTAATGACCCCCAGTAACAGCAAACAATGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR TCA 90 bp | TTGGTTTTTAAAAATATAGTGTCACTATGTGCCTGGAACTCACTATaGGATCAGACTGGCCACAAATTTACAGAGATCCTCCCAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LVFKNIVSLCAWNSL*DQTGHKFTEILPSA Trigger: AGCACTTGGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCACATAGTGACACTATATTTTTAAAAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR TCA 90 bp | TTTGTTCTCAAGACTATGAGACCTATGATTAAGAAAATATCATTATaGGCTAGAAAGATGGTTCAGGGGTTACAGCATTTGTGCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: FVLKTMRPMIKKISL*ARKMVQGLQHLCRH Trigger: GTGTCTGCACAAATGCTGTAACCCCTGAACCATCTTTCTAGCTCATAATGATATTTTCTTAATCATAGGTCTCATAGTCTTGAGAACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 90 bp | CATGGTAACATGTTCATTCATTTGCTTCCTATCTTTAGCAGCTGTTaGCAAAATAGTAACAGTAGCTGTGACAGATGTTTGATATTAAGA | + |
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Preference number: 1 (lower is better) Translates to: HGNMFIHLLPIFSSC*QNSNSSCDRCLILR Trigger: TCTTAATATCAAACATCTGTCACAGCTACTGTTACTATTTTGCCAACAGCTGCTAAAGATAGGAAGCAAATGAATGAACATGTTACCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTGGGGCTCCCATTCTCCCTTGCCAAGCCTaGTATCAGTCTTGGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KSKSGILAAGLMWPGAPILPCQA*YQSWVQ Trigger: TTGGACCCAAGACTGATATCAGGCTTGGCAAGGGAG...AATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGATGTGGCCTGGGGCTCCCATTCTGCCCCTCACTGTATTCGCACCCTTCCCCAGGAGCTGATATaGGCAAATCTTTGTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: RTDVAWGSHSAPHCIRTLPQELI*ANLCES Trigger: GGATTCACAAAGATTTGCCCATATCAGCTCCTGGGG...AAGGGTGCGAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGATGTGGCCTGGGGCTCCCATTCTGCCCCTCACTGTATTCGCACCCTTTGGTTGGGAATTAGATaGAGTCACCATGCCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RTDVAWGSHSAPHCIRTLWLGIR*SHHAFP Trigger: AGGAAAGGCATGGTGACTCCATCTAATTCCCAACCA...AAGGGTGCGAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCCCCACAGGCATGAGATaGGCATACTGGCAAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: CLELTMRSDWPQIYRDPPPTGMR*AYWQVL Trigger: GAGCACTTGCCAGTATGCTCATCTCATGCCTGTGGG...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCATGTGCCAGTTGCATTaGAAAGGTCAGCATAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VPGTHYEIRLATNLQRSSMCQLH*KGQHSW Trigger: CCAACTATGCTGACCTTTTCAATGCAACTGGCACAT...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCATTGGATTTGGGAGGTaGTATATTTCTGTGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: CLELTMRSDWPQIYRDPPIGFGR*YISVTP Trigger: TGGGGTCACAGAAATATACCACCTCCCAAATCCAAT...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCAGTACAATTCCAGTGTaGAGAAAATCTGATACTCCA | + |
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Preference number: 2 (lower is better) Translates to: CLELTMRSDWPQIYRDPPSTIPV*RKSDTP Trigger: TGGAGTATCAGATTTTCTCCACACTGGAATTGTACT...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATGTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATTCTGACCATTGGATTTaGGAGGTGGTATATTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TMCLELTMRSDWPQIYRDSDHWI*EVVYFC Trigger: ACAGAAATATACCACCTCCCAAATCCAATGGTCAGA...ATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCACATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATGTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCTTAATACTTATTTCTaGCATGCGATAGGCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: TMCLELTMRSDWPQIYRDLNTYF*HAIGTW Trigger: CCAAGTGCCTATCGCATGCCAGAAATAAGTATTAAG...ATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCACATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTATTGGGAAGCTGAGACAGTTTAGAGCTAGCTTGGGCAATGTAAAAGTAACATGTTCATTCATTTaGTTCCTATCTTTAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LAIGKLRQFRASLGNVKVTCSFI*FLSLAA Trigger: AGCTGCTAAAGATAGGAAGCAAATGAATGAACATGT...TACTTTTACATTGCCCAAGCTAGCTCTAAACTGTCTCAGCTTCCCAATAGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CAA 90 bp | TTGATAAATACTGCTTTGCCAAAACATGGTAACATGTTCATTCATTaGCTTCCTATCTTTAGCAGCTGTTGGCAAAATAGTAACAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LINTALPKHGNMFIH*LPIFSSCWQNSNSS Trigger: GCTACTGTTACTATTTTGCCAACAGCTGCTAAAGATAGGAAGCAAATGAATGAACATGTTACCATGTTTTGGCAAAGCAGTATTTATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGCCCAAGGAGCTGTAAAATTAACAAAGTAGTTATGGTATATGTAGCTAGTACTATGAGATCAGACTaGCCACAAATTTACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: YCPRSCKINKVVMVYVASTMRSD*PQIYRD Trigger: ATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGT...ACTAGCTACATATACCATAACTACTTTGTTAATTTTACAGCTCCTTGGGCAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | CAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTaGGGCTCCCATTCTGCCCCTCACTGTATTCGCACC | + |
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Preference number: 3 (lower is better) Translates to: QVRHSGCRTDVA*GSHSAPHCIRT Trigger: GGTGCGAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTaGCCTGGGGCTCCCATTCTGCCCCTCACTGTATTC | + |
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Preference number: 3 (lower is better) Translates to: KSKSGILAAGLM*PGAPILPLTVF Trigger: GAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTGGGGCTCCCATTCCCTTACTGTTTTCATaGTTTGCTGTTACTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: KSKSGILAAGLMWPGAPIPLLFS*FAVTGG Trigger: ACCCCCAGTAACAGCAAACAATGAAAACAGTAAGGG...AATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR TCA 72 bp | ATTTGGGAGGTGGTATATTTCTGTGACCCCAGGAGCTaGTATGGGCAAATCTTTGTGAATCCAAGGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: IWEVVYFCDPRS*YGQIFVNPRPA Trigger: GGCTGGCCTTGGATTCACAAAGATTTGCCCATATCAGCTCCTGGGGTCACAGAAATATACCACCTCCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | GTCACTATGTGCCTGGAACTCACTATGAGATCAGACTaGCCACAAATTTACAGAGATCCTCCCAAGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VTMCLELTMRSD*PQIYRDPPKCW Trigger: CCAGCACTTGGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCACATAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR GCA 72 bp | ATTGAAAAGGTCAGCATAGTTGGGCACAGTGGCATATaGCTGTGTCCTAGCTATTGGGAAGCTGAGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: IEKVSIVGHSGI*LCPSYWEAETV Trigger: AACTGTCTCAGCTTCCCAATAGCTAGGACACAGGCATATGCCACTGTGCCCAACTATGCTGACCTTTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCTACTGTTTTCATTGTTaGCTGTTACTGGGGGTCATT | + |
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Preference number: 3 (lower is better) Translates to: VPGTHYEIRLATNLQRSSYCFHC*LLLGVI Trigger: AATGACCCCCAGTAACAGCAAACAATGAAAACAGTA...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGCTATTGGGAAGCTGAGACAGTTTAGAGCTAGCTTGGGCAATGTAAAAGTAGGTTTTGTAACTTGGTaGGGAATTAGATGGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LAIGKLRQFRASLGNVKVGFVTW*GIRWSH Trigger: GTGACTCCATCTAATTCCCAACCAAGTTACAAAACC...TACTTTTACATTGCCCAAGCTAGCTCTAAACTGTCTCAGCTTCCCAATAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | ATTCACACTAGTACACCATGGTGCACACGTGGATGTTaGAATTATAGGAGTCAATGTTTTCCTTCTACCATG | + |
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Preference number: 3 (lower is better) Translates to: IHTSTPWCTRGC*NYRSQCFPSTM Trigger: CATGGTAGAAGGAAAACATTGACTCCTATAATTCCAACATCCACGTGTGCACCATGGTGTACTAGTGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR TCA 72 bp | AAAAATATAGTGTCACTATGTGCCTGGAACTCACTATaGGATCAGACTGGCCACAAATTTACAGAGATCCTC | + |
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Preference number: 3 (lower is better) Translates to: KNIVSLCAWNSL*DQTGHKFTEIL Trigger: GAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCACATAGTGACACTATATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | TGTTTCTGTTTCTTAAAGCCACAAGGTTTTGTAACTTaGTTGGGAATTAGATGGAGTCACCATGCCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CFCFLKPQGFVT*LGIRWSHHAFP Trigger: AGGAAAGGCATGGTGACTCCATCTAATTCCCAACCAAGTTACAAAACCTTGTGGCTTTAAGAAACAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CCA 72 bp | ATGTTCATTCATTTGCTTCCTATCTTTAGCAGCTGTTaGCAAAATAGTAACAGTAGCTGTGACAGATGTTTG | + |
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Preference number: 3 (lower is better) Translates to: MFIHLLPIFSSC*QNSNSSCDRCL Trigger: CAAACATCTGTCACAGCTACTGTTACTATTTTGCCAACAGCTGCTAAAGATAGGAAGCAAATGAATGAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTGGGGCTCCCATTGATTTCTTCCACCTGTaGGGACTCTTCCTCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: KSKSGILAAGLMWPGAPIDFFHL*GLFLSD Trigger: GTCCGAGAGGAAGAGTCCTCACAGGTGGAAGAAATC...AATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CCA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCATCATCGTCCTCCTCTaGTGGGGCTTCCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VPGTHYEIRLATNLQRSSIIVLL*WGFQSS Trigger: AGAGCTCTGGAAGCCCCACCAGAGGAGGACGATGAT...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCCCTTTCCCTCCTGTCTaGGTTTTTACCAGAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPPFPPV*VFTRGA Trigger: GGCTCCTCTGGTAAAAACTCAGACAGGAGGGAAAGG...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCTGGTCCAGCATTTTCTaGACCGCTTCCTCCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPWSSIF*TASSLS Trigger: AGAGAGGGAGGAAGCGGTGCAGAAAATGCTGGACCA...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCAAGAAGGGTGGGACTTaGCGTGGGAAAGTCGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VPGTHYEIRLATNLQRSSKKGGT*RGKVVF Trigger: AAACACGACTTTCCCACGTCAAGTCCCACCCTTCTT...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CAA 72 bp | CCCTCACTGTATTCGCACCCTTACTGTTTTCATTGTTaGCTGTTACTGGGGGTCATTAGACCCACAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: PSLYSHPYCFHC*LLLGVIRPTGM Trigger: CATGCCTGTGGGTCTAATGACCCCCAGTAACAGCAAACAATGAAAACAGTAAGGGTGCGAATACAGTGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCGAACTGTGCCTCTCATaGCTCTTCGTTGTCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: VPGTHYEIRLATNLQRSSELCLS*LFVVCL Trigger: CAAACAGACAACGAAGAGTCATGAGAGGCACAGTTC...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCGGTTGCAGCTTACTTTaGACTGAATCACCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPGCSLL*TESPFP Trigger: TGGGAAAGGTGATTCAGTTCAAAGTAAGCTGCAACC...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGTCACCATGCCTTTCCTTTGTAATCAGTTTCGTTTTGAATATTTTGGGGGTGGCTCTGGCTTTGTaGACCTGGACTGCTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: MESPCLSFVISFVLNILGVALAL*TWTAVL Trigger: GAGGACAGCAGTCCAGGTCCACAAAGCCAGAGCCAC...CCCCAAAATATTCAAAACGAAACTGATTACAAAGGAAAGGCATGGTGACTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTATTGGGAAGCTGAGACAGTTTAGAGCTAGCTTGGGCAATGTAAAAGTACTTGGAGGAGTGGTATaGACCAGAGTGGTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LAIGKLRQFRASLGNVKVLGGVV*TRVVAS Trigger: AGAAGCTACCACTCTGGTTCATACCACTCCTCCAAG...TACTTTTACATTGCCCAAGCTAGCTCTAAACTGTCTCAGCTTCCCAATAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | GTGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCACACATGAAGGAAGTTaGAGTGCTTTCCTTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: VPGTHYEIRLATNLQRSSTHEGS*SAFLLD Trigger: GTCCAAAAGGAAAGCACTGCAACTTCCTTCATGTGT...GGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | CTAGCTATTGGGAAGCTGAGACAGTTTAGAGCTAGCTTGGGCAATGTAAAAGTATTTGTGGACCTGGACTaGTGTCCTCTTCTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LAIGKLRQFRASLGNVKVFVDLD*CPLLFL Trigger: GAGGAAGAGAAGAGGACAGCAGTCCAGGTCCACAAA...TACTTTTACATTGCCCAAGCTAGCTCTAAACTGTCTCAGCTTCCCAATAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCAAAGTCGTGTTTCCGTaGACATCTGTTACCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPKVVFP*TSVTKS Trigger: AGATTTGGTAACAGATGTTCACGGAAACACGACTTT...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGCATCACAATGTAAAGTTATTACAGGAAAACAACATGGGAAGCCAGCTTCCTTTCCCACGTTCTTaGACTCCGGCAGCACGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TKHHNVKLLQENNMGSQLPFPRS*TPAARH Trigger: ATGACGTGCTGCCGGAGTTCAAGAACGTGGGAAAGG...AAGCTGGCTTCCCATGTTGTTTTCCTGTAATAACTTTACATTGTGATGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCTTTCTCCTTCTTCATTaGCGCCTTGTATTGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPFLLLH*RLVLFS Trigger: CGAAAACAATACAAGGCGGCAATGAAGAAGGAGAAA...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CCA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCGCAGTGCTTTCCTTTTaGACACTTTTGCATTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: CLELTMRSDWPQIYRDPPAVLSF*TLLHFE Trigger: TTCGAAATGCAAAAGTGTCCAAAAGGAAAGCACTGC...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR TCA 90 bp | TACTGCCCAAGGAGCTGTAAAATTAACAAAGTAGTTATGGTATATGTAGCTAGTACATTGCCCCGCAGATaGGGTTCCAGGTTGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YCPRSCKINKVVMVYVASTLPRR*GSRLQL Trigger: AAGCTGCAACCTGGAACCTCATCTGCGGGGCAATGT...ACTAGCTACATATACCATAACTACTTTGTTAATTTTACAGCTCCTTGGGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CAA 72 bp | CTAGCTATTGGGAAGCTGAGACAGTTTAGAGCTAGCTaGGGCAATGTAAAAGTACAATTCCAGTGTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LAIGKLRQFRAS*GNVKVQFQCGE Trigger: TTCTCCACACTGGAATTGTACTTTTACATTGCCCAAGCTAGCTCTAAACTGTCTCAGCTTCCCAATAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | TACTGCCCAAGGAGCTGTAAAATTAACAAAGTAGTTATGGTATATGTAGCTAGTACTGAACATACACATTaGCCCGCAGATGAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YCPRSCKINKVVMVYVASTEHTH*PADEVP Trigger: TGGAACCTCATCTGCGGGGCAATGTGTATGTTCAGT...ACTAGCTACATATACCATAACTACTTTGTTAATTTTACAGCTCCTTGGGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CAA 72 bp | TTCTGTTTCTTAAAGCCACAAGGTTTTGTAACTTGGTaGGGAATTAGATGGAGTCACCATGCCTTTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FCFLKPQGFVTW*GIRWSHHAFPL Trigger: CAAAGGAAAGGCATGGTGACTCCATCTAATTCCCAACCAAGTTACAAAACCTTGTGGCTTTAAGAAACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR GCA 90 bp | ATGGAGTCACCATGCCTTTCCTTTGTAATCAGTTTCGTTTTGAATATTTTGGGGGGTAGCTTCTTGACTTaGTATAGTATTCCTCATGAT | + |
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Preference number: 4 (lower is better) Translates to: MESPCLSFVISFVLNILGGSFLT*YSIPHD Trigger: ATCATGAGGAATACTATAGCAAGTCAAGAAGCTACC...CCCCAAAATATTCAAAACGAAACTGATTACAAAGGAAAGGCATGGTGACTCCAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| 3UTR CAA 72 bp | GAGTCACCATGCCTTTCCTTTGTAATCAGTTTCGTTTaGAATATTTTGGGGAATCTGAAGGATACTGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: ESPCLSFVISFV*NILGNLKDTVL Trigger: TAACACAGTATCCTTCAGATTCCCCAAAATATTCAAAACGAAACTGATTACAAAGGAAAGGCATGGTGACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTGGGGCTCCCATTGACTCCCTGTTTCTCTaGGAGGAGTGGTATGAACCA | + |
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Preference number: 5 (lower is better) Translates to: KSKSGILAAGLMWPGAPIDSLFL*EEWYEP Trigger: TGGTTCATACCACTCCTCCAAGAGAAACAGGGAGTC...AATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCAAGTCAGGCATTCTGGCTGCAGGACTGATGTGGCCTGGGGCTCCCATTCCACTCGGCCTTTATTaGTCTCTCCTGTTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KSKSGILAAGLMWPGAPIPLGLY*SLLFFL Trigger: AAGGAAGAACAGGAGAGACAAATAAAGGCCGAGTGG...AATGGGAGCCCCAGGCCACATCAGTCCTGCAGCCAGAATGCCTGACTTGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CAA 90 bp | AGGACTGATGTGGCCTGGGGCTCCCATTCTGCCCCTCACTGTATTCGCACCCTTCAGAGTGGTAGCTTCTaGACTTGCTATAGTATTCCT | + |
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Preference number: 5 (lower is better) Translates to: RTDVAWGSHSAPHCIRTLQSGSF*TCYSIP Trigger: AGGAATACTATAGCAAGTCAAGAAGCTACCACTCTG...AAGGGTGCGAATACAGTGAGGGGCAGAATGGGAGCCCCAGGCCACATCAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS TCA 90 bp | CTTGCTATAGTATTCCTCATGATGGTCCTTCCTTTCCCTCCTGTCTaGGTTTTTACCAGAGGAGCCAGTCCAAGCCGGAGGAGACATGTA | + |
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Preference number: 5 (lower is better) Translates to: LAIVFLMMVLPFPPV*VFTRGASPSRRRHV Trigger: TACATGTCTCCTCCGGCTTGGACTGGCTCCTCTGGTAAAAACTCAGACAGGAGGGAAAGGAAGGACCATCATGAGGAATACTATAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CAA 90 bp | TGCCTGGAACTCACTATGAGATCAGACTGGCCACAAATTTACAGAGATCCTCCCCTTCTCTTCCTCTTCTaGAACTGTGCCTCTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: CLELTMRSDWPQIYRDPPLLFLF*NCASHD Trigger: GTCATGAGAGGCACAGTTCAAGAAGAGGAAGAGAAG...GGGAGGATCTCTGTAAATTTGTGGCCAGTCTGATCTCATAGTGAGTTCCAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS GCA 90 bp | TTCTCTTGGAGGAGTGGTATGAACCAGAGTGGTAGCTTCTTGACTTaGTATAGTATTCCTCATGATGGTCCTTCCTTTCCCTCCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: FSWRSGMNQSGSFLT*YSIPHDGPSFPSCL Trigger: CAGACAGGAGGGAAAGGAAGGACCATCATGAGGAATACTATAGCAAGTCAAGAAGCTACCACTCTGGTTCATACCACTCCTCCAAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS-3UTR CAA 90 bp | GGAGCATTAGTGTTTCTGTACTCTTATGTGTTCTTTGTAAAACAGATTCAGACATGCAGTGCTTTCCTTTaGGACACTTTTGCATTTCGA | + |
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Preference number: 5 (lower is better) Translates to: GALVFLYSYVFFVKQIQTCSAFL*DTFAFR Trigger: TCGAAATGCAAAAGTGTCCAAAAGGAAAGCACTGCA...TGTCTGAATCTGTTTTACAAAGAACACATAAGAGTACAGAAACACTAATGCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS CCA 72 bp | TTCTTCGTTAGCAGAAACATCATCGTCCTCCTCTGGTaGGGCTTCCAGAGCTCTCAGCCGAGCCATTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FFVSRNIIVLLW*GFQSSQPSHFL Trigger: CAGAAAATGGCTCGGCTGAGAGCTCTGGAAGCCCCACCAGAGGAGGACGATGATGTTTCTGCTAACGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS GCA 72 bp | TTCTCCAGCCTTAAATCCTTGGGTGGTTCCGGGTTCTaGCAAATGCGCTCATTTTCAGCCTGGTCCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: FSSLKSLGGSGF*QMRSFSAWSSI Trigger: AATGCTGGACCAGGCTGAAAATGAGCGCATTTGGCAGAACCCGGAACCACCCAAGGATTTAAGGCTGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS CCA 72 bp | AAGTTCTTCGTTAGCAGAAACATCATCGTCCTCCTCTaGTGGGGCTTCCAGAGCTCTCAGCCGAGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: KFFVSRNIIVLL*WGFQSSQPSHF Trigger: AAAATGGCTCGGCTGAGAGCTCTGGAAGCCCCACCAGAGGAGGACGATGATGTTTCTGCTAACGAAGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS CCA 72 bp | GACAACTGGGTCGATATTTCTCCAGCCTTAAATCCTTaGGTGGTTCCGGGTTCTGCCAAATGCGCTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: DNWVDISPALNP*VVPGSAKCAHF Trigger: AAAATGAGCGCATTTGGCAGAACCCGGAACCACCCAAGGATTTAAGGCTGGAGAAATATCGACCCAGTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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| CDS GCA 72 bp | AGGAGTGGTATGAACCAGAGTGGTAGCTTCTTGACTTaGTATAGTATTCCTCATGATGGTCCTTCCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RSGMNQSGSFLT*YSIPHDGPSFP Trigger: GGGAAAGGAAGGACCATCATGAGGAATACTATAGCAAGTCAAGAAGCTACCACTCTGGTTCATACCACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049506.8 |
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