Pregenerated sensors for ZRANB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028180Ensembl transcript IDs: ENSMUST00000029831.16, ENSMUST00000106057.8, ENSMUST00000106058.8, ENSMUST00000106063.6, ENSMUST00000184802.8, ENSMUST00000198915.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCTTGAACTTGAGGGGGAGGATGAGCGTGATGAAGACCTTGAGTaGGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: DLELEGEDERDEDLE*DDRDFERLRLLLFF Trigger: AAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| 3UTR CAA 90 bp | ACCTGGACCTTGAACTTGAGGGGGAGGATGAGCGTGATGAAGACCTaGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TWTLNLRGRMSVMKT*SETIVTLSGSAYCF Trigger: AAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| 3UTR-3UTR TCA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGACTGGAAGAGCTTCTTaGACGGGACCTGGACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DLGNSESRLSRSLRHNYKTGRAS*TGPGPG Trigger: TCCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGT...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTTTGCCCATGTGTCTGAAGTCCAGGCAAGCCCAGGCAACCCTGTCTCTGAAAGCAATAAAGGCATaGACCTCTACTAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LALPMCLKSRQAQATLSLKAIKA*TSTSRC Trigger: ACATCTGCTAGTAGAGGTGCATGCCTTTATTGCTTT...CAGAGACAGGGTTGCCTGGGCTTGCCTGGACTTCAGACACATGGGCAAAGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACAACCGGAGTGAGACCTaGACTGCGAACTGGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FEKSEAQLQESKSSCATYNRSET*TANWKS Trigger: GCTCTTCCAGTTCGCAGTCCAGGTCTCACTCCGGTT...GTAGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCGTGATGAAGACCTTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCAACAGAGCATTTATCTaGGGAACAGTATATGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: MSVMKTLSETIVTLSGSANRAFI*GTVYGL Trigger: TAAGCCATATACTGTTCCCCAGATAAATGCTCTGTT...GGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR CAA 90 bp | GGGAGGATGAGCGTGATGAAGACCTTGAGTGAGACGATCGTGACTTaGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTACTATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRMSVMKTLSETIVT*SGSAYCFSFCYYLL Trigger: AAGAAGATAGTAACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCTCATCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGAAACAGGAAAAATAATTCCCTCACAAGGAGCCCCAGCACAACTGTTGCTGTCAGCCTGCCACTaGGAAACAGGTTTCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KGETGKIIPSQGAPAQLLLSACH*ETGFKS Trigger: GCTTTTGAAACCTGTTTCTCAGTGGCAGGCTGACAG...CAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATTATTTTTCCTGTTTCTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTATATACTTACCTTGCTTTTGCTGCTGAAGAGACTGTTAAAGAGAAACCTGAAGAAGAGCCCCTGTaGGACCTGGAGCTGGATCTT | + |
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Preference number: 2 (lower is better) Translates to: PLYTYLAFAAEETVKEKPEEEPL*DLELDL Trigger: AAGATCCAGCTCCAGGTCCCACAGGGGCTCTTCTTC...AGGTTTCTCTTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACGACTTTCGAGAAGTCTaGGGCACAATTACAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FEKSEAQLQESKSSCATYDFREV*GTITRE Trigger: CTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAGTC...GTAGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCGACTTTCGAGAAGTCTaGGGCACAATTACAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: QKAQKQTKANTLDLEDLGDFREV*GTITRE Trigger: CTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAGTC...GCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTGCTCTTCTTCTCCCTCTaGCTCTTTATCTTCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: TRSPSTTVVPYILTLLLLLFFSL*LFIFNF Trigger: GAAGTTGAAGATAAAGAGTCAGAGGGAGAAGAAGAG...CAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTATATACTTACCTTGCTTTTGCTGCTGAAGAGACTGTTAAAGAGAAACCTACCTGGACTGCGAACTaGAAGAGCTTCTTGAACGGG | + |
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Preference number: 2 (lower is better) Translates to: PLYTYLAFAAEETVKEKPTWTAN*KSFLNG Trigger: CCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCAGGT...AGGTTTCTCTTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCTCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGAAAGCAATAAAGGCATaGACCTCTACTAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: NSLTRSPSTTVVPYILTLKAIKA*TSTSRC Trigger: ACATCTGCTAGTAGAGGTGCATGCCTTTATTGCTTT...CAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGACAATGATTCTAAGGCACCCTCAGCTTGTTCCCAGTTGTCAGCTTTGCAAAGCGGCTCCGCCTATTaGTTTTCTTTTTGTTACTAT | + |
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Preference number: 2 (lower is better) Translates to: RDNDSKAPSACSQLSALQSGSAY*FSFCYY Trigger: ATAGTAACAAAAAGAAAAGCAATAGGCGGAGCCGCT...TTGCAAAGCTGACAACTGGGAACAAGCTGAGGGTGCCTTAGAATCATTGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTACAGCGGCTCCGCCTATTaGTTTTCTTTTTGTTACTAT | + |
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Preference number: 2 (lower is better) Translates to: SETIVTLSGSAYCFSFCYSGSAY*FSFCYY Trigger: ATAGTAACAAAAAGAAAAGCAATAGGCGGAGCCGCT...GTAACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTACCATTACTGCAAGTTTTaGATTGCCAATCATTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SETIVTLSGSAYCFSFCYHYCKF*IANHWH Trigger: GTGCCAATGATTGGCAATGCAAAACTTGCAGTAATG...GTAACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198915.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTCCCAATTCACATTACTaGAAGTTTTGCATTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: TLSETIVTLSGSAYCFSFPNSHY*KFCIAN Trigger: ATTGGCAATGCAAAACTTGCAGTAATGTGAATTGGG...AAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198915.5 |
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| 3UTR-3UTR CCA 90 bp | GACAATGATTCTAAGGCACCCTCAGCTTGTTCCCAGTTGTCAGCTTTGCAACGTAACAGAGCATTTATCTaGGGAACAGTATATGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: DNDSKAPSACSQLSALQRNRAFI*GTVYGL Trigger: TAAGCCATATACTGTTCCCCAGATAAATGCTCTGTT...ACGTTGCAAAGCTGACAACTGGGAACAAGCTGAGGGTGCCTTAGAATCATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTGTCACTGTCAGCCTGCCACTaGGAAACAGGTTTCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VQNQTSQGKCSLKFMSLSLSACH*ETGFKS Trigger: GCTTTTGAAACCTGTTTCTCAGTGGCAGGCTGACAG...TGACAGGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTAAAGCAATAAAGGCATaGACCTCTACTAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPKAIKA*TSTSRC Trigger: ACATCTGCTAGTAGAGGTGCATGCCTTTATTGCTTT...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTAACAGAGCATTTATCTaGGGAACAGTATATGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPNRAFI*GTVYGL Trigger: TAAGCCATATACTGTTCCCCAGATAAATGCTCTGTT...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGAAACAGGAAAAATAATTCCCTCACAAGGAGCCCCAGCACAACTGTTGTTTCTACAATCCTCTTaGATTAAGAGGTGTAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KGETGKIIPSQGAPAQLLFLQSS*IKRCKA Trigger: AGCTTTACACCTCTTAATGCAAGAGGATTGTAGAAA...CAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATTATTTTTCCTGTTTCTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTATATACTTACCTTGCTTTTGCTGCTGAAGAGACTGTTAAAGAGAAACCTAACAGAGCATTTATCTaGGGAACAGTATATGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: PLYTYLAFAAEETVKEKPNRAFI*GTVYGL Trigger: TAAGCCATATACTGTTCCCCAGATAAATGCTCTGTT...AGGTTTCTCTTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCAAAGCAATAAAGGCATaGACCTCTACTAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: CNVQNQTSQGKCSLKFMSKAIKA*TSTSRC Trigger: ACATCTGCTAGTAGAGGTGCATGCCTTTATTGCTTT...GGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAACATTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR CCA 72 bp | CAGAATGTGTTGATCCGGAGGACGACCTGTGGTGCCTaGGAAAAGTGGTGGTGTTCCGTAGGGGTTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QNVLIRRTTCGA*EKWWCSVGVGP Trigger: AGGGCCAACCCCTACGGAACACCACCACTTTTCCCAGGCACCACAGGTCGTCCTCCGGATCAACACATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106057.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTACCTGGACCTGGACCTaGAACTTGAGGGGGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: TLSETIVTLSGSAYCFSFTWTWT*NLRGRM Trigger: CATCCTCCCCCTCAAGTTCAAGGTCCAGGTCCAGGT...AAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCAACTGGAAGAGCTTCTaGAACGGGACCTGGACCTGG | + |
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Preference number: 3 (lower is better) Translates to: QKAQKQTKANTLDLEDLGNWKSF*NGTWTW Trigger: CCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGTT...GCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTCAGCTTGTTCCCAGTaGTCAGCTTTGCAACGTAGT | + |
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Preference number: 3 (lower is better) Translates to: SQGAPAQLLSLIYLPCFCSACSQ*SALQRS Trigger: ACTACGTTGCAAAGCTGACAACTGGGAACAAGCTGA...GCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTGTCAGCTTGTTCCCAGTaGTCAGCTTTGCAACGTAGT | + |
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Preference number: 3 (lower is better) Translates to: TRSPSTTVVPYILTLLLLSACSQ*SALQRS Trigger: ACTACGTTGCAAAGCTGACAACTGGGAACAAGCTGA...CAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTTGCATTGCCAATCATaGGCACTAAATAAGCCCCGG | + |
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Preference number: 3 (lower is better) Translates to: LSETIVTLSGSAYCFSFCLHCQS*ALNKPR Trigger: CCGGGGCTTATTTAGTGCCAATGATTGGCAATGCAA...ACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198915.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGGAGAAACAGGAAAAATAATTCCCTCACAAGGAGCCCCAGCACAACTGTTGGCCCCAGCACAACTGTaGTCCCTTATATACTTACCT | + |
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Preference number: 3 (lower is better) Translates to: KGETGKIIPSQGAPAQLLAPAQL*SLIYLP Trigger: AGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGC...CAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATTATTTTTCCTGTTTCTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTGCCCCAGCACAACTGTaGTCCCTTATATACTTACCT | + |
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Preference number: 3 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPAPAQL*SLIYLP Trigger: AGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGC...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACAGTAAATCAGCTTGTTCCCAGTaGTCAGCTTTGCAACGTAGT | + |
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Preference number: 3 (lower is better) Translates to: KSEAQLQESKSSCATYSKSACSQ*SALQRS Trigger: ACTACGTTGCAAAGCTGACAACTGGGAACAAGCTGA...TTTACTGTAGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAATGTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCGGGAACCAGAATGTGTaGATCCGGAGGACGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: CNVQNQTSQGKCSLKFMSGNQNV*IRRTTC Trigger: ACAGGTCGTCCTCCGGATCAACACATTCTGGTTCCC...GGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAACATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | GAACAGAGCATTTATCTGGGGAACAGTATATGGCTTAAAATGCAATTTACTTTCGGGAACCAGAATGTGTaGATCCGGAGGACGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: EQSIYLGNSIWLKMQFTFGNQNV*IRRTTC Trigger: ACAGGTCGTCCTCCGGATCAACACATTCTGGTTCCC...GAAAGTAAATTGCATTTTAAGCCATATACTGTTCCCCAGATAAATGCTCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTACATTACTGCAAGTTTaGCATTGCCAATCATTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LSETIVTLSGSAYCFSFCTLLQV*HCQSLA Trigger: TGCCAATGATTGGCAATGCAAAACTTGCAGTAATGT...ACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198915.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCAACCCTTATATACTTACCTaGCTTTTGCTGCTGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KAQKQTKANTLDLEDLGNPYILT*LLLLKR Trigger: TCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGG...GTTGCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTTCATCTTTAGATCAGTaGAGAAGAGAAACACTCACT | + |
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Preference number: 3 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPSSLDQ*RRETLT Trigger: AGTGAGTGTTTCTCTTCTCAACTGATCTAAAGATGA...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTCGTCCTCATCTAGCTTATACTTAGATAGATCTTCATCCTCATCCTCTTCTACTGCAAGTTTTGCATaGCCAATCATTGGCACTAAA | + |
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Preference number: 3 (lower is better) Translates to: SSSSSSLYLDRSSSSSSSTASFA*PIIGTK Trigger: TTTAGTGCCAATGATTGGCAATGCAAAACTTGCAGT...AGAAGAGGATGAGGATGAAGATCTATCTAAGTATAAGCTAGATGAGGACGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198915.5 |
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| 3UTR-3UTR CAA 90 bp | GTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTGTCAATACTTACCTTGCTTTaGCTGCTGAAGAGACTGTTA | + |
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Preference number: 3 (lower is better) Translates to: VQNQTSQGKCSLKFMSLSILTLL*LLKRLL Trigger: TAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTAT...TGACAGGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAATGTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCATACTTACCTTGCTTTaGCTGCTGAAGAGACTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CNVQNQTSQGKCSLKFMSILTLL*LLKRLL Trigger: TAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTAT...GGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAACATTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTACGTACGATACTTTGTTTTCATCTTTAGATCAGTTGAGAAGAGAAACACTCCCTTATATACTTACCTaGCTTTTGCTGCTGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: STYDTLFSSLDQLRRETLPYILT*LLLLKR Trigger: TCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGG...GAGTGTTTCTCTTCTCAACTGATCTAAAGATGAAAACAAAGTATCGTACGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| 3UTR CAA 72 bp | TTGAACTTGAGGGGGAGGATGAGCGTGATGAAGACCTaGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLRGRMSVMKT*SETIVTLSGSA Trigger: GGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCTCATCCTCCCCCTCAAGTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
||
| CDS-3UTR TCA 90 bp | ACTAGCTTATTAGCTTTGCCCATGTGTCTGAAGTCCAGGCAAGCCCAGGCAACCTCCAGTCCCCGTCACTaGCTCGGAAATTCTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSLLALPMCLKSRQAQATSSPRH*LGNSWS Trigger: CGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGA...GGTTGCCTGGGCTTGCCTGGACTTCAGACACATGGGCAAAGCTAATAAGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTTTCTTTTTCCAGTCCCCGTCACTaGCTCGGAAATTCTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLSETIVTLSGSAYCFSFSSPRH*LGNSWS Trigger: CGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGA...AAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
||
| CDS-3UTR TCA 90 bp | TCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTCCAGTCCCCGTCACTaGCTCGGAAATTCTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGAPAQLLSLIYLPCFCSSPRH*LGNSWS Trigger: CGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGA...GCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR TCA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGTCCAGTCCCCGTCACTaGCTCGGAAATTCTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DLGNSESRLSRSLRHNYKSSPRH*LGNSWS Trigger: CGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGA...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAACCGGAGTGAGACCTaGACTGCGAACTGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLRKSTFEKSEAQLQESNRSET*TANWKS Trigger: GCTCTTCCAGTTCGCAGTCCAGGTCTCACTCCGGTT...ACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTGGAAGAAGAGCCCCTGTaGGACCTGGAGCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRSPSTTVVPYILTLLLLEEEPL*DLELDL Trigger: AAGATCCAGCTCCAGGTCCCACAGGGGCTCTTCTTC...CAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGAAACAGGAAAAATAATTCCCTCACAAGGAGCCCCAGCACAACTGTTGACTGGAAGAGCTTCTTaGACGGGACCTGGACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGETGKIIPSQGAPAQLLTGRAS*TGPGPG Trigger: TCCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGT...CAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATTATTTTTCCTGTTTCTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACTGGAAGAGCTTCTTaGACGGGACCTGGACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPTGRAS*TGPGPG Trigger: TCCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGT...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGACCTGGACTGCGAACTaGAAGAGCTTCTTGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLGNSESRLSRSLRHNYKTWTAN*KSFLNG Trigger: CCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCAGGT...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACAATGATTCTAAGGCACCCTCAGCTTGTTCCCAGTTGTCAGCTTTGCAAACCTGGACTGCGAACTaGAAGAGCTTCTTGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDNDSKAPSACSQLSALQTWTAN*KSFLNG Trigger: CCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCAGGT...TTGCAAAGCTGACAACTGGGAACAAGCTGAGGGTGCCTTAGAATCATTGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTCGAACCACGGGATCTaGAATGTTCTCTGGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGAPAQLLSLIYLPCFCSNHGI*NVLWNR Trigger: CCGGTTCCAGAGAACATTCCAGATCCCGTGGTTCGA...GCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACAGTAAATGCAGCGAAGAAGAGCCCCTGTaGGACCTGGAGCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAQLQESKSSCATYSKCSEEEPL*DLELDL Trigger: AAGATCCAGCTCCAGGTCCCACAGGGGCTCTTCTTC...GCTGCATTTACTGTAGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCAACACTGGAAGAGCTTCTTaGACGGGACCTGGACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQKQTKANTLDLEDLGNTGRAS*TGPGPG Trigger: TCCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGT...GTTGCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACAGTAAATGCGAAGAAGAGCCCCTGTaGGACCTGGAGCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAQLQESKSSCATYSKCEEEPL*DLELDL Trigger: AAGATCCAGCTCCAGGTCCCACAGGGGCTCTTCTTC...GCATTTACTGTAGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| 3UTR CAA 72 bp | AGCGTGATGAAGACCTTGAGTGAGACGATCGTGACTTaGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVMKTLSETIVT*SGSAYCFSFCY Trigger: GTAACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCTTCATCACGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
||
| CDS-3UTR TCA 90 bp | GTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTGTCATCCAGTCCCCGTCACTaGCTCGGAAATTCTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VQNQTSQGKCSLKFMSLSSSPRH*LGNSWS Trigger: CGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGA...TGACAGGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTAGCGGCTCCGCCTATTaGTTTTCTTTTTGTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQGAPAQLLSLIYLPCFSGSAY*FSFCYY Trigger: ATAGTAACAAAAAGAAAAGCAATAGGCGGAGCCGCT...AAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTCATTACTGCAAGTTTTaGATTGCCAATCATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSQGAPAQLLSLIYLPCFHYCKF*IANHWH Trigger: GTGCCAATGATTGGCAATGCAAAACTTGCAGTAATG...AAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTGCTGAAGAGACTGTTAAAAACCGGAGTGAGACCTaGACTGCGAACTGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NCCPLYTYLAFAAEETVKNRSET*TANWKS Trigger: GCTCTTCCAGTTCGCAGTCCAGGTCTCACTCCGGTT...TTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| 3UTR CAA 72 bp | GAACATAAATTGGTAATTCCAACTAGCTTATTAGCTTaGCCCATGTGTCTGAAGTCCAGGCAAGCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHKLVIPTSLLA*PMCLKSRQAQA Trigger: TGCCTGGGCTTGCCTGGACTTCAGACACATGGGCAAAGCTAATAAGCTAGTTGGAATTACCAATTTATGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCCTCTTCTTCTCCCTCTaGCTCTTTATCTTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKAQKQTKANTLDLEDLGLFFSL*LFIFNF Trigger: GAAGTTGAAGATAAAGAGTCAGAGGGAGAAGAAGAG...GCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTGTCAACCTGGACTGCGAACTaGAAGAGCTTCTTGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNQTSQGKCSLKFMSLSTWTAN*KSFLNG Trigger: CCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCAGGT...TGACAGGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | GCAATGTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTCGAACCACGGGATCTaGAATGTTCTCTGGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: AMFKIRHHKANVHLNSCPSNHGI*NVLWNR Trigger: CCGGTTCCAGAGAACATTCCAGATCCCGTGGTTCGA...GGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAACATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAAATCAGACATCACAAGGCAAATGTTCACTTAAATTCATGTCCCTGTCATCGAACCACGGGATCTaGAATGTTCTCTGGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNQTSQGKCSLKFMSLSSNHGI*NVLWNR Trigger: CCGGTTCCAGAGAACATTCCAGATCCCGTGGTTCGA...TGACAGGGACATGAATTTAAGTGAACATTTGCCTTGTGATGTCTGATTTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| 3UTR CAA 72 bp | AGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTaGCTTTTGCTGCTGAAGAGACTGTTAAAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSTTVVPYILT*LLLLKRLLKRN Trigger: GTTTCTCTTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCAACCTCTTCTTCTCCCTCTaGCTCTTTATCTTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQKQTKANTLDLEDLGNLFFSL*LFIFNF Trigger: GAAGTTGAAGATAAAGAGTCAGAGGGAGAAGAAGAG...GTTGCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTCCCAATTCACATTACTaGAAGTTTTGCATTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GQLRKSTFEKSEAQLQESPNSHY*KFCIAN Trigger: ATTGGCAATGCAAAACTTGCAGTAATGTGAATTGGG...ACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| 3UTR CAA 72 bp | ATACAGAAAGCACAAAAACAAACCAAGGCTAACACGTaGGATCTAGAAGATCTGGGCAACTCAGAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQKAQKQTKANT*DLEDLGNSESR Trigger: TCGACTTTCTGAGTTGCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGTTCGTGTGCAACCTACAGTAAATGCAGCAAGGAAAATAAGACAAAAACTCTTCTTCTCCCTCTaGCTCTTTATCTTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVRVQPTVNAARKIRQKLFFSL*LFIFNF Trigger: GAAGTTGAAGATAAAGAGTCAGAGGGAGAAGAAGAG...TTTTTGTCTTATTTTCCTTGCTGCATTTACTGTAGGTTGCACACGAACTCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGTTCGTGTGCAACCTACAGTAAATGCAGCAAGGAAAATAAGACAAAAAAGCGGCTCCGCCTATTaGTTTTCTTTTTGTTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRVRVQPTVNAARKIRQKSGSAY*FSFCYY Trigger: ATAGTAACAAAAAGAAAAGCAATAGGCGGAGCCGCT...TTTTTGTCTTATTTTCCTTGCTGCATTTACTGTAGGTTGCACACGAACTCTTAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| 3UTR CAA 72 bp | AGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTaGCTGCTGAAGAGACTGTTAAAGAGAAACCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: STTVVPYILTLL*LLKRLLKRNLL Trigger: TAAAAGGTTTCTCTTTAACAGTCTCTTCAGCAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR GCA 90 bp | AGAATTCTTCTGTTACTTAGGTATCTGCAATGTTCAAAATCAGACATCACAAGGCATTACTGCAAGTTTTaGATTGCCAATCATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RILLLLRYLQCSKSDITRHYCKF*IANHWH Trigger: GTGCCAATGATTGGCAATGCAAAACTTGCAGTAATG...CCTTGTGATGTCTGATTTTGAACATTGCAGATACCTAAGTAACAGAAGAATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CAA 90 bp | GACCTGGACCTGGACCTTGAACTTGAGGGGGAGGATGAGCGTGATGAAGACCTTACATTTCCACACTTCTaGTCAGGGCAGATCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLDLDLELEGEDERDEDLTFPHF*SGQIQS Trigger: GGACTGGATCTGCCCTGACAAGAAGTGTGGAAATGT...AAGGTCTTCATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCCAGGTCCAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
||
| CDS-3UTR CAA 90 bp | GAATGTGTTGATCCGGAGGACGACCTGTGGTGCCTGGGAAAAGTGGTGGTGTTCTCATCTTGGCCTCAGTaGTCTTTTCTCGACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: ECVDPEDDLWCLGKVVVFSSWPQ*SFLDHI Trigger: GATGTGGTCGAGAAAAGACAACTGAGGCCAAGATGA...GAACACCACCACTTTTCCCAGGCACCACAGGTCGTCCTCCGGATCAACACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106057.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGCTTATTAGCTTTGCCCATGTGTCTGAAGTCCAGGCAAGCCCAGGCAACCACATTTCCACACTTCTaGTCAGGGCAGATCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLLALPMCLKSRQAQATTFPHF*SGQIQS Trigger: GGACTGGATCTGCCCTGACAAGAAGTGTGGAAATGT...GGTTGCCTGGGCTTGCCTGGACTTCAGACACATGGGCAAAGCTAATAAGCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
||
| CDS-3UTR CAA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGACCTGGACCTGGACCTaGAACTTGAGGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DLGNSESRLSRSLRHNYKTWTWT*NLRGRM Trigger: CATCCTCCCCCTCAAGTTCAAGGTCCAGGTCCAGGT...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CAA 90 bp | GACAATGATTCTAAGGCACCCTCAGCTTGTTCCCAGTTGTCAGCTTTGCAACGTAACTGGAAGAGCTTCTaGAACGGGACCTGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DNDSKAPSACSQLSALQRNWKSF*NGTWTW Trigger: CCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGTT...ACGTTGCAAAGCTGACAACTGGGAACAAGCTGAGGGTGCCTTAGAATCATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCCGGAGGACGACCTGTGGTGCCTGGGAAAAGTGGTGGTGTTCCGTAGGGACATTACTGCAAGTTTaGCATTGCCAATCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIRRTTCGAWEKWWCSVGTLLQV*HCQSLA Trigger: TGCCAATGATTGGCAATGCAAAACTTGCAGTAATGT...CCCTACGGAACACCACCACTTTTCCCAGGCACCACAGGTCGTCCTCCGGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106057.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTAAGAGTTCGTGTGCAACCTACCTGGACCTGGACCTaGAACTTGAGGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSRSLRHNYKRVRVRVQPTWTWT*NLRGRM Trigger: CATCCTCCCCCTCAAGTTCAAGGTCCAGGTCCAGGT...AGGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGAACTGGAAGAGCTTCTaGAACGGGACCTGGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: DLGNSESRLSRSLRHNYKNWKSF*NGTWTW Trigger: CCAGGTCCAGGTCCCGTTCAAGAAGCTCTTCCAGTT...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | GATCTGGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGGGGAACCAGAATGTGTaGATCCGGAGGACGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: DLGNSESRLSRSLRHNYKGNQNV*IRRTTC Trigger: ACAGGTCGTCCTCCGGATCAACACATTCTGGTTCCC...CTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029831.16 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGCTTTTGCTGGGGAACCAGAATGTGTaGATCCGGAGGACGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: TRSPSTTVVPYILTLLLLGNQNV*IRRTTC Trigger: ACAGGTCGTCCTCCGGATCAACACATTCTGGTTCCC...CAGCAAAAGCAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029831.16 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | GACAATGATTCTAAGGCACCCTCAGCTTGTTCCCAGTTGTCAGCTTTGCAACGTTTGCATTGCCAATCATaGGCACTAAATAAGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: DNDSKAPSACSQLSALQRLHCQS*ALNKPR Trigger: CCGGGGCTTATTTAGTGCCAATGATTGGCAATGCAA...ACGTTGCAAAGCTGACAACTGGGAACAAGCTGAGGGTGCCTTAGAATCATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | AGAGGTGTAAAGCTGTTAAGAGACAATGATTCTAAGGCACCCTCAGCTTGTTCCACATTTCCACACTTCTaGTCAGGGCAGATCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: RGVKLLRDNDSKAPSACSTFPHF*SGQIQS Trigger: GGACTGGATCTGCCCTGACAAGAAGTGTGGAAATGT...GGAACAAGCTGAGGGTGCCTTAGAATCATTGTCTCTTAACAGCTTTACACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCTCATCTTGGCCTCAGTaGTCTTTTCTCGACCACATC | + |
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Preference number: 5 (lower is better) Translates to: QKAQKQTKANTLDLEDLGSSWPQ*SFLDHI Trigger: GATGTGGTCGAGAAAAGACAACTGAGGCCAAGATGA...GCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGCACAAAAACAAACCAAGGCTAACACGTTGGATCTAGAAGATCTGGGCTTGCATTGCCAATCATaGGCACTAAATAAGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: QKAQKQTKANTLDLEDLGLHCQS*ALNKPR Trigger: CCGGGGCTTATTTAGTGCCAATGATTGGCAATGCAA...GCCCAGATCTTCTAGATCCAACGTGTTAGCCTTGGTTTGTTTTTGTGCTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | TCCTCGTCCTCATCTAGCTTATACTTAGATAGATCTTCATCCTCATCCTCTTCTACATTTCCACACTTCTaGTCAGGGCAGATCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSLYLDRSSSSSSSTFPHF*SGQIQS Trigger: GGACTGGATCTGCCCTGACAAGAAGTGTGGAAATGT...AGAAGAGGATGAGGATGAAGATCTATCTAAGTATAAGCTAGATGAGGACGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184802.8 ENSMUST00000198915.5 |
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| CDS-3UTR CAA 90 bp | AGAATTCTTCTGTTACTTAGGTATCTGCAATGTTCAAAATCAGACATCACAAGGACCTGGACCTGGACCTaGAACTTGAGGGGGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RILLLLRYLQCSKSDITRTWTWT*NLRGRM Trigger: CATCCTCCCCCTCAAGTTCAAGGTCCAGGTCCAGGT...CCTTGTGATGTCTGATTTTGAACATTGCAGATACCTAAGTAACAGAAGAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | AATTCCCTCACAAGGAGCCCCAGCACAACTGTTGTCCCTTATATACTTACCTTGACTGCAAGTTTTGCATaGCCAATCATTGGCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: NSLTRSPSTTVVPYILTLTASFA*PIIGTK Trigger: TTTAGTGCCAATGATTGGCAATGCAAAACTTGCAGT...CAAGGTAAGTATATAAGGGACAACAGTTGTGCTGGGGCTCCTTGTGAGGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | GGGCAACTCAGAAAGTCGACTTTCGAGAAGTCTGAGGCACAATTACAAGAGAGTACATTACTGCAAGTTTaGCATTGCCAATCATTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GQLRKSTFEKSEAQLQESTLLQV*HCQSLA Trigger: TGCCAATGATTGGCAATGCAAAACTTGCAGTAATGT...ACTCTCTTGTAATTGTGCCTCAGACTTCTCGAAAGTCGACTTTCTGAGTTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | AGAGGTGTAAAGCTGTTAAGAGACAATGATTCTAAGGCACCCTCAGCTTGTTCCACTGCAAGTTTTGCATaGCCAATCATTGGCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: RGVKLLRDNDSKAPSACSTASFA*PIIGTK Trigger: TTTAGTGCCAATGATTGGCAATGCAAAACTTGCAGT...GGAACAAGCTGAGGGTGCCTTAGAATCATTGTCTCTTAACAGCTTTACACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106057.8 ENSMUST00000106058.8 |
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| CDS-3UTR CAA 90 bp | AGAATTCTTCTGTTACTTAGGTATCTGCAATGTTCAAAATCAGACATCACAAGGACATTTCCACACTTCTaGTCAGGGCAGATCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: RILLLLRYLQCSKSDITRTFPHF*SGQIQS Trigger: GGACTGGATCTGCCCTGACAAGAAGTGTGGAAATGT...CCTTGTGATGTCTGATTTTGAACATTGCAGATACCTAAGTAACAGAAGAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029831.16 ENSMUST00000106057.8 ENSMUST00000106058.8 ENSMUST00000184802.8 |
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| CDS CAA 72 bp | TGGACTGCGAACTGGAAGAGCTTCTTGAACGGGACCTaGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: WTANWKSFLNGT*SETIVTLSGSA Trigger: GGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106063.6 |
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| CDS TCA 72 bp | TGCGAACTGGAAGAGCTTCTTGAACGGGACCTTGAGTaGGACGATCGTGACTTTGAGCGGCTCCGCCTATTG | + |
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Preference number: 6 (lower is better) Translates to: CELEELLERDLE*DDRDFERLRLL Trigger: CAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCCCGTTCAAGAAGCTCTTCCAGTTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106063.6 |
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| CDS CAA 90 bp | AGTGAGACCTGGACTGCGAACTGGAAGAGCTTCTTGAACGGGACCTaGAGTGAGACGATCGTGACTTTGAGCGGCTCCGCCTATTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SETWTANWKSFLNGT*SETIVTLSGSAYCF Trigger: AAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCCCGTTCAAGAAGCTCTTCCAGTTCGCAGTCCAGGTCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106063.6 |
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| CDS CAA 72 bp | TTCTTGAACGGGACCTTGAGTGAGACGATCGTGACTTaGAGCGGCTCCGCCTATTGCTTTTCTTTTTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: FLNGTLSETIVT*SGSAYCFSFCY Trigger: GTAACAAAAAGAAAAGCAATAGGCGGAGCCGCTCAAAGTCACGATCGTCTCACTCAAGGTCCCGTTCAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106063.6 |
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