Pregenerated sensors for ZRANB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030967Ensembl transcript IDs: ENSMUST00000033265.5, ENSMUST00000106157.8, ENSMUST00000210507.2, ENSMUST00000215716.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACTAGAACTCCCCCTTCAGTCACACAGCAGTCCAGCCACTCTCTaGGCAGTTTCTCTTGCTGCTCCTCATTACCTAGCTCCTGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PLELPLQSHSSPATL*AVSLAAPHYLAPEQ Trigger: CTGCTCAGGAGCTAGGTAATGAGGAGCAGCAAGAGAAACTGCTCAGAGAGTGGCTGGACTGCTGTGTGACTGAAGGGGGAGTTCTAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR GCA 90 bp | GCTCCCTTTCCATCCATCCATCCATCCAGGGTAGAAGTGCACAAATaGACCGCCCAGAGTCGAGTAAGAACCCCCTTTACAGGGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: APFPSIHPSRVEVHK*TAQSRVRTPFTGHS Trigger: AGAGTGCCCTGTAAAGGGGGTTCTTACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGATGGAAAGGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | GGATGTCAGGTGCTAATGAGAGAGAGAGCATCTCACTGGTCTGTCTaGTATGTGCTGTTTATGAGTGCCCATGCTGGGAAAATGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: GCQVLMRERASHWSV*YVLFMSAHAGKMVS Trigger: TGAGACCATTTTCCCAGCATGGGCACTCATAAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCTCTCATTAGCACCTGACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | AGAGAGAGCATCTCACTGGTCTGTCTGCTATGTGCTGTTTATGAGTaGCCATGCTGGGAAAATGGTCTCAGTAACATGAAGATGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: RESISLVCLLCAVYE*PCWENGLSNMKMLV Trigger: CACCAGCATCTTCATGTTACTGAGACCATTTTCCCAGCATGGGCACTCATAAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | GGGAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTaGCACATCAGTCTAAGTGCTTATCAGGACACTACATGTTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GRRRGNVCICYFATA*HISLSAYQDTTCCV Trigger: CACACAACATGTAGTGTCCTGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | AAATACAGAGGGAACTCAGGAAAGGACACTCAAGAATTGACAATATaGAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: KYRGNSGKDTQELTI*RTRLNPEPDSVPQG Trigger: ACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGCATATTGTCAATTCTTGAGTGTCCTTTCCTGAGTTCCCTCTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR TCA 90 bp | GTGCTGTTTATGAGTGCCCATGCTGGGAAAATGGTCTCAGTAACATaGAGATGCTGGTGCACTTTTCCTAGTACACAACTTCTCAAACAA | + |
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Preference number: 1 (lower is better) Translates to: VLFMSAHAGKMVSVT*RCWCTFPSTQLLKQ Trigger: TTGTTTGAGAAGTTGTGTACTAGGAAAAGTGCACCAGCATCTTCATGTTACTGAGACCATTTTCCCAGCATGGGCACTCATAAACAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR TCA 90 bp | CCACATCAGTCTAAGTGCTTATCAGGACACTACATGTTGTGTGCCTaGGGAGGTCAGAAATGTTTACCCAGTACTAACATATACCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: PHQSKCLSGHYMLCA*GGQKCLPSTNIYLK Trigger: CTTCAGGTATATGTTAGTACTGGGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCACTTAGACTGATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | AAAGGGGAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTaGTTGCCACATCAGTCTAAGTGCTTATCAGGACACTACATGTTG | + |
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Preference number: 1 (lower is better) Translates to: KGEEKRKCVYLLLCN*LPHQSKCLSGHYML Trigger: CAACATGTAGTGTCCTGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | TTCATTAAAGGGGAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTaGAACTGCTTGCCACATCAGTCTAAGTGCTTATCAGGACACTAC | + |
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Preference number: 1 (lower is better) Translates to: FIKGEEKRKCVYLLL*NCLPHQSKCLSGHY Trigger: GTAGTGTCCTGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCCCTTTAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 90 bp | TTACAAACTGTAGTTCAACCAAAGTTCTCCATCTCCTCATGCAGATaGAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAAGATAACTTG | + |
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Preference number: 1 (lower is better) Translates to: LQTVVQPKFSISSCR*SQFSPVSVEQKDNL Trigger: CAAGTTATCTTTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAGAACTTTGGTTGAACTACAGTTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGAGACAGGAAGTGCACATaGAGGAGCTTCCTTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: CVTKGWFLRRELFCMATRDRKCT*RSFLSL Trigger: CAGTGAAAGGAAGCTCCTCCATGTGCACTTCCTGTC...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGATCCGGCAGGGTATGGCTCGCTCCATGCTGCATATTCTGTTTAGGATACAGGCCACCTCAGACCTaGTGCCTTGGTCTTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SRSGRVWLAPCCIFCLGYRPPQT*CLGLFL Trigger: AAGAAAAAGACCAAGGCATCAGGTCTGAGGTGGCCT...GTATCCTAAACAGAATATGCAGCATGGAGCGAGCCATACCCTGCCGGATCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTAGCTATGTGCTGTTTATaGGTGCCCATGCTGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVAMCCL*VPMLGK Trigger: TTTTCCCAGCATGGGCACTCATAAACAGCACATAGC...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCCTCTCCATCAGACAGGGATGTACAAGGCCGGATCTGTCTGTAGCGGTCAGCCATCGTTCTCCATaGCAACCAAAGCAGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: IFLSIRQGCTRPDLSVAVSHRSP*QPKQRS Trigger: ACTTCTCTGCTTTGGTTGCCATGGAGAACGATGGCT...GACCGCTACAGACAGATCCGGCCTTGTACATCCCTGTCTGATGGAGAGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR CAA 90 bp | AGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAAGATAACTaGGGAGCAGATCCGGCAGGGTATGGCTCGCTCCATGCTGCATAT | + |
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Preference number: 2 (lower is better) Translates to: RCSQFSPVSVEQKDN*GADPAGYGSLHAAY Trigger: ATATGCAGCATGGAGCGAGCCATACCCTGCCGGATCTGCTCCCAAGTTATCTTTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR CAA 90 bp | TGCAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTaGGGTACAACACAGATGCACCTAGAGACCAGTGTTACCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CRTRLNPEPDSVPQG*GTTQMHLETSVTLS Trigger: TGAGAGGGTAACACTGGTCTCTAGGTGCATCTGTGTTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTAAAATCTCTAAAACAATaGGAAATGGGTCTGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVKSLKQ*EMGLVW Trigger: CCACACCAGACCCATTTCCCATTGTTTTAGAGATTT...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTAAAACAATGGGAAATGGGTCTGGTGTGGTGGGAGCAGGATGTCAGGTGTTCTCCATCTCCTCATaGAGATGCAGTCAATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ISKTMGNGSGVVGAGCQVFSISS*RCSQFS Trigger: AGAGAATTGACTGCATCTGCATGAGGAGATGGAGAA...CACCTGACATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTGCCACATCAGTGCTTAGAGCAGAGGTaGCAAAGACAGGAAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: EEKRKCVYLLLCNCLPHQCLEQR*QRQEVA Trigger: AGCTACTTCCTGTCTTTGTCACCTCTGCTCTAAGCA...CTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR CAA 90 bp | GGGGAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTaGCCACATCAGTCTAAGTGCTTATCAGGACACTACATGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GEEKRKCVYLLLCNC*PHQSKCLSGHYMLC Trigger: ACACAACATGTAGTGTCCTGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTTGGGTACAATGGAGTCACCTACTGTaGAAATTACTTTCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: AEQGSILSLTLYHKVWVQWSHLL*KLLSGF Trigger: AAAACCAGAAAGTAATTTTCACAGTAGGTGACTCCA...TTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTATCAGGACACTACATGTTGTGTGCCTGAGGAGGTCAGAAATGTTTACCAGACTACACAGAAACTaGTCATACAATGCATTGACC | + |
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Preference number: 2 (lower is better) Translates to: VLIRTLHVVCLRRSEMFTRLHRN*SYNALT Trigger: GGTCAATGCATTGTATGATCAGTTTCTGTGTAGTCT...GGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTGTCAACCAGAGGCAAAAATGTGATGGTGACATCATCATCAGTGTTCAGACCTTGTATAGCCCAGTaGGATTGGACTTTTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: SLSTRGKNVMVTSSSVFRPCIAQ*DWTFPT Trigger: TGTTGGAAAAGTCCAATCGCACTGGGCTATACAAGG...TCTGAACACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTGCCACATCAGTCTTATGAGTGCCCATGCTaGGAAAATGGTCTCAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: EKRKCVYLLLCNCLPHQSYECPC*ENGLSN Trigger: GTTACTGAGACCATTTTCCCAGCATGGGCACTCATA...AGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAATCTCCTCATGCAGATaGAGTCAATTCTCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QSARETNESPIPILRVQEISSCR*SQFSPV Trigger: CACAGGAGAGAATTGACTGCATCTGCATGAGGAGAT...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAATGTGCTGTTTATGAGTaGCCATGCTGGGAAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: QSARETNESPIPILRVQECAVYE*PCWENG Trigger: ACCATTTTCCCAGCATGGGCACTCATAAACAGCACA...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAATTGGGAGGAAGGTTTTaGTTAACTGGATCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QSARETNESPIPILRVQELGGRF*LTGSLP Trigger: AGGCAGAGATCCAGTTAAGCAAAACCTTCCTCCCAA...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAGTCAATTCTCTCCTGTaGGTGTGGAACAGAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: QSARETNESPIPILRVQEVNSLL*VWNRKI Trigger: TATCTTTCTGTTCCACACTCACAGGAGAGAATTGAC...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAAGGACACTCAAGAATTaGCAATATGCAGAACAAGGC | + |
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Preference number: 2 (lower is better) Translates to: QSARETNESPIPILRVQERTLKN*QYAEQG Trigger: GCCTTGTTCTGCATATTGTCAATTCTTGAGTGTCCT...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAGTATGGCTCGCTCCATaGTGCATATTCTGTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: TNESPIPILRVQEMEPSLVWLAP*CIFCLG Trigger: TCCTAAACAGAATATGCAGCATGGAGCGAGCCATAC...TAAAGAAGGCTCCATTTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTCCCACAGGGAAGAGTGTATTTGCTACTTTaGAACTGCTTGCCACATCAG | + |
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Preference number: 2 (lower is better) Translates to: YLKSPRNGAFFNSFPQGRVYLLL*NCLPHQ Trigger: CTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACAC...TCTTCCCTGTGGGAAAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTCCCACAGGGAAGAATGACAGCCTTCTATTaGCTTGGTTATCATTCACTG | + |
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Preference number: 2 (lower is better) Translates to: YLKSPRNGAFFNSFPQGRMTAFY*LGYHSL Trigger: CAGTGAATGATAACCAAGTCAATAGAAGGCTGTCAT...TCTTCCCTGTGGGAAAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAAAATCAACTCTACACATaGAGATCAGCTATTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: REEWVPIKLCVVRVTGHKNQLYT*RSAILD Trigger: ATCTAGAATAGCTGATCTCCATGTGTAGAGTTGATT...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTCCCACAGGGAAGAGATCATACAATGCATTaGCCACCTTACTGCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: YLKSPRNGAFFNSFPQGRDHTMH*PPYCIL Trigger: TAAAATGCAGTAAGGTGGTCAATGCATTGTATGATC...TCTTCCCTGTGGGAAAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR TCA 90 bp | TATCATCTTTTACAAAGGACGGCATTACACTTTCTTGGGACAATAATTATGGCTAGCATGCAGCATAAATaGTCTTTCATCCTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: YHLLQRTALHFLGTIIMASMQHK*SFILRT Trigger: TGTTCTCAGGATGAAAGATCATTTATGCTGCATGCT...AGCCATAATTATTGTCCCAAGAAAGTGTAATGCCGTCCTTTGTAAAAGATGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR CCA 72 bp | CACCAGCACCTCGGTTGCCATAGCCATCGTTCTCCATaGCAACCAAAGCAGAGAAGTGGCCCCTTGTATAGC | + |
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Preference number: 3 (lower is better) Translates to: HQHLGCHSHRSP*QPKQRSGPLYS Trigger: GCTATACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR TCA 72 bp | CTGCTTAGAGCAGAGGTGACAAAGACAGGAAGTAGCTaGAGACTGTCTGCATGGCCGCCTGGGAACAGAACA | + |
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Preference number: 3 (lower is better) Translates to: LLRAEVTKTGSS*RLSAWPPGNRT Trigger: TGTTCTGTTCCCAGGCGGCCATGCAGACAGTCTTCAGCTACTTCCTGTCTTTGTCACCTCTGCTCTAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 72 bp | CCATCCATCCATCCATCCAGGGTAGAAGTGCACAAATaGACCGCCCAGAGTCGAGTAAGAACCCCCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: PSIHPSRVEVHK*TAQSRVRTPFT Trigger: TGTAAAGGGGGTTCTTACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGCTAATGAGAGAGAGAGCATCTCACTGGTCTGTCTGCTATGTGCTGTTTGAACAGAAAGATAACTaGGGAGCAGATCCGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QVLMRERASHWSVCYVLFEQKDN*GADPAG Trigger: CCCTGCCGGATCTGCTCCCAAGTTATCTTTCTGTTC...AAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCTCTCATTAGCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 72 bp | CTTGGGAGCAGATCCGGCAGGGTATGGCTCGCTCCATaGTGCATATTCTGTTTAGGATACCACACTAACTTT | + |
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Preference number: 3 (lower is better) Translates to: LGSRSGRVWLAP*CIFCLGYHTNF Trigger: AAAGTTAGTGTGGTATCCTAAACAGAATATGCAGCATGGAGCGAGCCATACCCTGCCGGATCTGCTCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTTGGGTACAATGGGAACAGAACAGGTaGAGTCCAAGTAACTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: AEQGSILSLTLYHKVWVQWEQNR*SPSNCH Trigger: GTGACAGTTACTTGGACTCAACCTGTTCTGTTCCCA...TTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 72 bp | GTGCTAATGAGAGAGAGAGCATCTCACTGGTCTGTCTaGTATGTGCTGTTTATGAGTGCCCATGCTGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: VLMRERASHWSV*YVLFMSAHAGK Trigger: TTTCCCAGCATGGGCACTCATAAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCTCTCATTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR CCA 72 bp | CAAGAGCTTAACATAGCGCTGATTTCCCAAAGGGGTTaGCCATTTCACAGCCAGCAGTCTGCTAGAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: QELNIALISQRG*PFHSQQSARET Trigger: AGTTTCTCTAGCAGACTGCTGGCTGTGAAATGGCCAACCCCTTTGGGAAATCAGCGCTATGTTAAGCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTTCACTGTCAACCAGAGGCAAAAATGTGATGGTGACATCATCATCAGTGCAGAGAAGTGGCCCCTaGTATAGCCCAGTGCGATTG | + |
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Preference number: 3 (lower is better) Translates to: FLSLSTRGKNVMVTSSSVQRSGP*YSPVRL Trigger: CAATCGCACTGGGCTATACAAGGGGCCACTTCTCTG...CACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| 3UTR TCA 72 bp | CCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTaGGTGTGGAACAGAAAGATAACTTGGGAGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: PSPHADAVNSLL*VWNRKITWEQI Trigger: GATCTGCTCCCAAGTTATCTTTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| 3UTR GCA 72 bp | ATCTCACTGGTCTGTCTGCTATGTGCTGTTTATGAGTaGCCATGCTGGGAAAATGGTCTCAGTAACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISLVCLLCAVYE*PCWENGLSNMK Trigger: CTTCATGTTACTGAGACCATTTTCCCAGCATGGGCACTCATAAACAGCACATAGCAGACAGACCAGTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | GGGAACTCAGGAAAGGACACTCAAGAATTGACAATATaGAGAACAAGGCTCAATCCTGAGCCTGACTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GNSGKDTQELTI*RTRLNPEPDSV Trigger: TACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGCATATTGTCAATTCTTGAGTGTCCTTTCCTGAGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | GTAGTTCAACCAAAGTTCTCCATCTCCTCATGCAGATaGAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVQPKFSISSCR*SQFSPVSVEQK Trigger: TTTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAGAACTTTGGTTGAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | CAAACTGTAGTTCAACCAAAGTTCTCCATCTCCTCATaGAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QTVVQPKFSISS*RCSQFSPVSVE Trigger: TTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAGAACTTTGGTTGAACTACAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | GGGGAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTaGAACTGCTTGCCACATCAGTCTAAGTGCTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GEEKRKCVYLLL*NCLPHQSKCLS Trigger: TGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | TCTCAGCTCTCTGTGGCTTATTTGGGAGGAAGGTTTTaGTTAACTGGATCTCTGCCTCCTGAAAAATCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SQLSVAYLGGRF*LTGSLPPEKST Trigger: AGTTGATTTTTCAGGAGGCAGAGATCCAGTTAAGCAAAACCTTCCTCCCAAATAAGCCACAGAGAGCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR TCA 72 bp | CCACGTAGTTATAAAAGTATTACTGTCCAGTCCATCTaGAAATCCCTATACCTGCCACCCAGCCATGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: PRSYKSITVQSI*KSLYLPPSHVS Trigger: TGATACATGGCTGGGTGGCAGGTATAGGGATTTTCAGATGGACTGGACAGTAATACTTTTATAACTACGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CCA 72 bp | CTGGATCTCTGCCTCCTGAAAAATCAACTCTACACATaGAGATCAGCTATTCTAGATGCTATGGATGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LDLCLLKNQLYT*RSAILDAMDAK Trigger: CTTAGCATCCATAGCATCTAGAATAGCTGATCTCCATGTGTAGAGTTGATTTTTCAGGAGGCAGAGATCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR TCA 72 bp | TCTAAGTGCTTATCAGGACACTACATGTTGTGTGCCTaGGGAGGTCAGAAATGTTTACCCAGTACTAACATA | + |
|
Preference number: 3 (lower is better) Translates to: SKCLSGHYMLCA*GGQKCLPSTNI Trigger: TATGTTAGTACTGGGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCACTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR GCA 72 bp | AGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTaGCACATCAGTCTAAGTGCTTATCAGGACACTACA | + |
|
Preference number: 3 (lower is better) Translates to: RGNVCICYFATA*HISLSAYQDTT Trigger: TGTAGTGTCCTGATAAGCACTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CCA 72 bp | GATAATTTGTACAAAGTTTCCAAATCTCTAAAACAATaGGAAATGGGTCTGGTGTGGTGGGAGCAGGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: DNLYKVSKSLKQ*EMGLVWWEQDV Trigger: GACATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGATTTGGAAACTTTGTACAAATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAAAAGGACACTCAAGAATaGACAATATGCAGAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: REEWVPIKLCVVRVTGHKKDTQE*TICRTR Trigger: CCTTGTTCTGCATATTGTCAATTCTTGAGTGTCCTT...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTCCCACAGGGAAGATGTGTATTTGCTACTTaGCAACTGCTTGCCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: YLKSPRNGAFFNSFPQGRCVFAT*QLLATS Trigger: TGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACA...TCTTCCCTGTGGGAAAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAAATGACAGCCTTCTATaGACTTGGTTATCATTCACT | + |
|
Preference number: 3 (lower is better) Translates to: QSARETNESPIPILRVQENDSLL*TWLSFT Trigger: AGTGAATGATAACCAAGTCAATAGAAGGCTGTCATT...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTCTTGCCGTGGATAATTaGTACAAAGTTTCCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: ESPIPILRVQEMEPSLILLAVDN*YKVSKS Trigger: AGATTTGGAAACTTTGTACAAATTATCCACGGCAAG...AAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATAGGAATGGGGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CCA 72 bp | GTATCATCTTTTACAAAGGACGGCATTACACTTTCTTaGGACAATAATTATGGCTGTTGGTTTAGTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSSFTKDGITLS*DNNYGCWFSSR Trigger: TCTTGAACTAAACCAACAGCCATAATTATTGTCCCAAGAAAGTGTAATGCCGTCCTTTGTAAAAGATGATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | TCCGCCGAGAGCTTTTCTGCATGGCCACTAGAACTCCCCCTTCAGTCACACAGCCACCCACACAGGCATTaGGGAATAGCCAATCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAESFSAWPLELPLQSHSHPHRH*GIANQS Trigger: AGACTGATTGGCTATTCCTCAATGCCTGTGTGGGTG...GCTGTGTGACTGAAGGGGGAGTTCTAGTGGCCATGCAGAAAAGCTCTCGGCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACATAACCCACCCAGGGATGAGTGAGCCTGCTCCCTTTCCATCCATCCATTCATGCAGGCTGTCATaGAGGGCTTTCCGAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CHITHPGMSEPAPFPSIHSCRLS*RAFRST Trigger: GGTGCTTCGGAAAGCCCTGCATGACAGCCTGCATGA...ATGGATGGATGGAAAGGGAGCAGGCTCACTCATCCCTGGGTGGGTTATGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CAA 72 bp | AAGACTGTCTGCATGGCCGCCTGGGAACAGAACAGGTaGAGTCCAAGTAACTGTCACATAACCCACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTVCMAAWEQNR*SPSNCHITHPG Trigger: CCCTGGGTGGGTTATGTGACAGTTACTTGGACTCAACCTGTTCTGTTCCCAGGCGGCCATGCAGACAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGAATTGAGGAGATTCTGTaGGACTCCTGGTCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVTKGWFLRRELFCMATRIEEIL*DSWSYA Trigger: AGCGTAGGACCAGGAGTCCCACAGAATCTCCTCAAT...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGATGTACAAGGCCGGATCTGTCTGTAGCGGTCAAGCCATTTTTCTACCAGGCTATTACCACTACTaGAGCCTCCCCTCCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGMYKAGSVCSGQAIFLPGYYHY*SLPSIE Trigger: CTCGATGGAGGGGAGGCTGCAGTAGTGGTAATAGCC...TGGTAGAAAAATGGCTTGACCGCTACAGACAGATCCGGCCTTGTACATCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACATAACCCACCCAGGGATGAGTGAGCCTGCTCCCTTTCCATCCATCCATGAGAGCTTTTCTGCATaGCCACTAGAACTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHITHPGMSEPAPFPSIHESFSA*PLELPL Trigger: AAGGGGGAGTTCTAGTGGCCATGCAGAAAAGCTCTC...ATGGATGGATGGAAAGGGAGCAGGCTCACTCATCCCTGGGTGGGTTATGTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGAGCCAATTCGATCCTCTaGAAATCCATCTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVTKGWFLRRELFCMATRANSIL*KSIFTS Trigger: GGAAGTGAAGATGGATTTTCAGAGGATCGAATTGGC...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCTAATGAGAGAGAGAGCATCTCACTGGTCTGTCTGCTATGTGCTGTTTGGCTATTACCACTACTaGAGCCTCCCCTCCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLMRERASHWSVCYVLFGYYHY*SLPSIE Trigger: CTCGATGGAGGGGAGGCTGCAGTAGTGGTAATAGCC...AAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCTCTCATTAGCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTACGCTGGGATAAGCACTaGGTACATCTGATTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVRWDKH*VHLIAL Trigger: AAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCG...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCAGCACCTCGGTTGCCATAGCCATCGTTCTCCATGGCAACCAAAGCAGATGTAAACCAAAGCTCTaGGAATACCACGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STSTSVAIAIVLHGNQSRCKPKL*EYHDSQ Trigger: CTGGGAATCGTGGTATTCCCAGAGCTTTGGTTTACA...TCTGCTTTGGTTGCCATGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAATGTGTGACCAAGGGGTaGTTTCTCCGCCGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLLMQMQSILSCECGTECVTKG*FLRREL Trigger: AAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CAA 72 bp | GATCTGTCTGTAGCGGTCAAGCCATTTTTCTACCATTaGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLSVAVKPFFYH*CDQGVVSPPRA Trigger: AGCTCTCGGCGGAGAAACCACCCCTTGGTCACACAAATGGTAGAAAAATGGCTTGACCGCTACAGACAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGACTTAACCCTTGGTCTTaGACTAGAGTCTGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: CVTKGWFLRRELFCMATRLNPWS*TRVWTY Trigger: ATATGTCCAGACTCTAGTGCAAGACCAAGGGTTAAG...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGGTGTGGTGGGAGCAGGATCGCCGAGAGCTTTTCTaGATGGCCACTAGAACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSKSLKQWEMGLVWWEQDRRELF*MATRTP Trigger: GGGAGTTCTAGTGGCCATGCAGAAAAGCTCTCGGCG...ATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGATTTGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGCATGGCCACTAGAACTCCCCCTTCAGTCACACAGCAGTCCAGCCACTTTCCACCTTCAGTACTaGAAGGATCCCAATCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSAWPLELPLQSHSSPATFHLQY*KDPNLY Trigger: GTAGAGATTGGGATCCTTCCAGTACTGAAGGTGGAA...AGTGGCTGGACTGCTGTGTGACTGAAGGGGGAGTTCTAGTGGCCATGCAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | ACCGCCCAGAGTCGAGTAAGAACCCCCTTTACAGGGCACTCTTCCAAACAAATAGACAGGAAGTGCACATaGAGGAGCTTCCTTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TAQSRVRTPFTGHSSKQIDRKCT*RSFLSL Trigger: CAGTGAAAGGAAGCTCCTCCATGTGCACTTCCTGTC...TATTTGTTTGGAAGAGTGCCCTGTAAAGGGGGTTCTTACTCGACTCTGGGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CAA 72 bp | AGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTaGGGTACAACACAGATGCACCTAGAGACCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLNPEPDSVPQG*GTTQMHLETSV Trigger: AACACTGGTCTCTAGGTGCATCTGTGTTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CAA 72 bp | CGTTCTCCATGGCAACCAAAGCAGAGAAGTGGCCCCTaGTATAGCCCAGTGCGATTGGACTTTTCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSPWQPKQRSGP*YSPVRLDFSNK Trigger: TTTGTTGGAAAAGTCCAATCGCACTGGGCTATACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTCAGTCACACAGCAGTCCAGCCACTCTCTGAGCAGTTTCTCTTGCTGCTCTACCAACATCACTTaGACCACTTTTAAATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPSVTQQSSHSLSSFSCCSTNIT*TTFKWI Trigger: GATCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGA...GCAGCAAGAGAAACTGCTCAGAGAGTGGCTGGACTGCTGTGTGACTGAAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTTCAGTCACACAGCAGTCCAGCCACTCTCTGAGCAGTTTCTCTTGCTGTTTTGTAGTTGGAGGTaGTCTTCTTTGGCTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSHTAVQPLSEQFLLLFCSWR*SSLAIT Trigger: GGTAATAGCCAAAGAAGATCACCTCCAACTACAAAA...CAGCAAGAGAAACTGCTCAGAGAGTGGCTGGACTGCTGTGTGACTGAAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGACATAGTACACTTGATTaGAGACGGCCAGTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CVTKGWFLRRELFCMATRHSTLD*RRPVFI Trigger: TATGAAAACTGGCCGTCTGCAATCAAGTGTACTATG...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCACCAGCACCTCGGTTaGCATAGCCATCGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQQSARETNESPIPILRVHQHLG*HSHRSP Trigger: TGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTG...GACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTGCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCTAAAACAATGGGAAATGGGTCTGGTGTGGTGGGAGCAGGATGTCAGGTGAGCAGTTTCTCTTGCTaGTCCTCATTACCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISKTMGNGSGVVGAGCQVSSFSC*SSLPSS Trigger: GGAGCTAGGTAATGAGGAGCAGCAAGAGAAACTGCT...CACCTGACATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGATCCGGCAGGGTATGGCTCGCTCCATGCTGCATATTCTGTTTAGGATACTTCCACCTTCAGTACTaGAAGGATCCCAATCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSGRVWLAPCCIFCLGYFHLQY*KDPNLY Trigger: GTAGAGATTGGGATCCTTCCAGTACTGAAGGTGGAA...GTATCCTAAACAGAATATGCAGCATGGAGCGAGCCATACCCTGCCGGATCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAAGGCCGGATCTGTCTGTAGCGGTCAAGCCATTTTTCTACCATTTGTGTCTCCTGGTCCTACGCTaGGATAAGCACTGGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CTRPDLSVAVKPFFYHLCLLVLR*DKHWVH Trigger: ATGTACCCAGTGCTTATCCCAGCGTAGGACCAGGAG...ACACAAATGGTAGAAAAATGGCTTGACCGCTACAGACAGATCCGGCCTTGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAATTGAGGAGATTCTGTaGGACTCCTGGTCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLLMQMQSILSCECGTEIEEIL*DSWSYA Trigger: AGCGTAGGACCAGGAGTCCCACAGAATCTCCTCAAT...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCTCTCCATCAGACAGGGATGTACAAGGCCGGATCTGTCTGTAGCGGTCACTTGTATGCTTCTATaGCTGCTAAGTCACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSIRQGCTRPDLSVAVTCMLL*LLSHLP Trigger: TGGAAGGTGACTTAGCAGCCATAGAAGCATACAAGT...GACCGCTACAGACAGATCCGGCCTTGTACATCCCTGTCTGATGGAGAGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | ACCGCCCAGAGTCGAGTAAGAACCCCCTTTACAGGGCACTCTTCCAAACAAATAGTTCAGGACACACCATaGCTGGAATACACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAQSRVRTPFTGHSSKQIVQDTP*LEYTLL Trigger: CAGCAAAGTGTATTCCAGCCATGGTGTGTCCTGAAC...TATTTGTTTGGAAGAGTGCCCTGTAAAGGGGGTTCTTACTCGACTCTGGGCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTGCACATGGAGGAGCTTCCTTTCACTGTCAACCAGAGGCAAAAATGTGATAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVHMEELPFTVNQRQKCDSTGYI*LLLASS Trigger: TGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCT...ATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAAGCTCCTCCATGTGCACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR TCA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAAATGTCTCCTCCCGATaGCTTGTATGCTTCTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHLLMQMQSILSCECGTENVSSR*LVCFYG Trigger: GCCATAGAAGCATACAAGTCATCGGGAGGAGACATT...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTACATAGTACACTTGATTaGAGACGGCCAGTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVHSTLD*RRPVFI Trigger: TATGAAAACTGGCCGTCTGCAATCAAGTGTACTATG...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCCCAGAGTCGAGTAAGAACCCCCTTTACAGGGCACTCTTCCAAACAAATAATTTCTCTCCGGATTTaGTCTGTCAGTTCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAQSRVRTPFTGHSSKQIISLRI*SVSSGH Trigger: GTGTCCTGAACTGACAGAGCAAATCCGGAGAGAAAT...TATTTGTTTGGAAGAGTGCCCTGTAAAGGGGGTTCTTACTCGACTCTGGGCGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGAGGAGCTTCCTTTCACTGTCAACCAGAGGCAAAAATGTGATGGTGACACTTCAAGTTCCTCCTTaGTACCAACAGCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWRSFLSLSTRGKNVMVTLQVPP*YQQHQP Trigger: TGGCTGGTGCTGTTGGTACCAAGGAGGAACTTGAAG...TGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAAGCTCCTCCATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTGAGTCCAAGTAACTGTCACATAACCCACCCAGGGATGAGTGAGCCTGCTACTTGTATGCTTCTATaGCTGCTAAGTCACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSNCHITHPGMSEPATCMLL*LLSHLP Trigger: TGGAAGGTGACTTAGCAGCCATAGAAGCATACAAGT...AGCAGGCTCACTCATCCCTGGGTGGGTTATGTGACAGTTACTTGGACTCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTGCCACATCAGTCATCTGCAGTAAGCTaGCGTGCAATGTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKRKCVYLLLCNCLPHQSSAVS*RAMSPP Trigger: GGGAGGAGACATTGCACGCCAGCTTACTGCAGATGA...CTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAAGGACACACCATGGCTaGAATACACTTTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLLMQMQSILSCECGTERTHHG*NTLCCL Trigger: CAAGCAGCAAAGTGTATTCCAGCCATGGTGTGTCCT...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | AGCCATCGTTCTCCATGGCAACCAAAGCAGAGAAGTGGCCCCTTGTATAGCCCATTGCTCATTAATTATTaGAGAAGCCTCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHRSPWQPKQRSGPLYSPLLINY*RSLFSL Trigger: GAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAA...TGGGCTATACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAGAACGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTACTCTGCCAACTCTATTaGTTCAATGTTATTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVLCQLY*FNVIRS Trigger: AGACCTAATAACATTGAAGCAATAGAGTTGGCAGAG...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTTGGGTACAATGGAATACACTTTGCTaGTTGCTGAGATACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AEQGSILSLTLYHKVWVQWNTLC*LLRYLC Trigger: ACAGAGGTATCTCAGCAAGCAGCAAAGTGTATTCCA...TTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAAGTGGCCCCTTGTATAGCCCAGTGCGATTGGACTTTTCCAACAAAAAATGCCCAGTCTTCTTaGCATTGTTCTTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SREVAPCIAQCDWTFPTKNAQSS*HCSSLS Trigger: ACTGAGGGAAGAACAATGGCAAGAAGACTGGGCATT...TTTTGTTGGAAAAGTCCAATCGCACTGGGCTATACAAGGGGCCACTTCTCTGCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCTAATGAGAGAGAGAGCATCTCACTGGTCTGTCTGCTATGTGCTGTTTCCTTGTATAGCCCAGTaGGATTGGACTTTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QVLMRERASHWSVCYVLFPCIAQ*DWTFPT Trigger: TGTTGGAAAAGTCCAATCGCACTGGGCTATACAAGG...AAACAGCACATAGCAGACAGACCAGTGAGATGCTCTCTCTCTCATTAGCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAAGTTCCACTGGGTCTCTaGGCACGACACATAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: REEWVPIKLCVVRVTGHKVPLGL*ARHIVH Trigger: GTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAAC...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCACTGTCAACCAGAGGCAAAAATGTGATGGTGACATCATCATCAGTGGTTCCACTGGGTCTCTaGGCACGACACATAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLSTRGKNVMVTSSSVVPLGL*ARHIVH Trigger: GTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAAC...CACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTTCTCCATGGCAACCAAAGCAGAGAAGTGGCCCCTTGTATAGCCCAGTGCACATCTGATTGCTCTTaGCCAGTTCAAATATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IVLHGNQSREVAPCIAQCTSDCS*PVQICT Trigger: TGTACATATTTGAACTGGCCAAGAGCAATCAGATGT...GCACTGGGCTATACAAGGGGCCACTTCTCTGCTTTGGTTGCCATGGAGAACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGACCAAGGGGTGGTTTCTCCGCCGAGAGCTTTTCTGCATGGCCACTAGATTATTAGGTCTGGGATaGTCACAAACAACACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVTKGWFLRRELFCMATRLLGLG*SQTTHF Trigger: AAAATGTGTTGTTTGTGACCATCCCAGACCTAATAA...TCTAGTGGCCATGCAGAAAAGCTCTCGGCGGAGAAACCACCCCTTGGTCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTGTCAACCAGAGGCAAAAATGTGATGGTGACATCATCATCAGTGTTCTCATCTGCAGTAAGCTaGCGTGCAATGTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSTRGKNVMVTSSSVFSSAVS*RAMSPP Trigger: GGGAGGAGACATTGCACGCCAGCTTACTGCAGATGA...GAACACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTTATCAGGACACTACATGTTGTGTGCCTGAGGAGGTCAGAAATGTTTACCAGCCATCGTTCTCCATaGCAACCAAAGCAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLIRTLHVVCLRRSEMFTSHRSP*QPKQRS Trigger: ACTTCTCTGCTTTGGTTGCCATGGAGAACGATGGCT...GGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGATGTACAAGGCCGGATCTGTCTGTAGCGGTCAAGCCATTTTTCTACCAATTTTCCATGCTGTATaGAGACTTAACCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGMYKAGSVCSGQAIFLPIFHAV*RLNPWS Trigger: AGACCAAGGGTTAAGTCTTCATACAGCATGGAAAAT...TGGTAGAAAAATGGCTTGACCGCTACAGACAGATCCGGCCTTGTACATCCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAACACCCACACAGGCATTaGGGAATAGCCAATCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REEWVPIKLCVVRVTGHKHPHRH*GIANQS Trigger: AGACTGATTGGCTATTCCTCAATGCCTGTGTGGGTG...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTTATCAGGACACTACATGTTGTGTGCCTGAGGAGGTCAGAAATGTTTACCTGTGTAAAACCAATGTaGACAGTCATGCAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIRTLHVVCLRRSEMFTCVKPM*TVMQAV Trigger: GACAGCCTGCATGACTGTTCACATTGGTTTTACACA...GGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGCATGGCCACTAGAACTCCCCCTTCAGTCACACAGCAGTCCAGCCACTCATCGAGCTCTGTCTTaGTCATTAATTATTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSAWPLELPLQSHSSPATHRALS*SLIIEE Trigger: TTCTTCAATAATTAATGAGCAAGACAGAGCTCGATG...AGTGGCTGGACTGCTGTGTGACTGAAGGGGGAGTTCTAGTGGCCATGCAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTATCAGGACACTACATGTTGTGTGCCTGAGGAGGTCAGAAATGTTTACCAATGCCCAGTCTTCTTaGCATTGTTCTTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLIRTLHVVCLRRSEMFTNAQSS*HCSSLS Trigger: ACTGAGGGAAGAACAATGGCAAGAAGACTGGGCATT...GGTAAACATTTCTGACCTCCTCAGGCACACAACATGTAGTGTCCTGATAAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCCCAGAGTCGAGTAAGAACCCCCTTTACAGGGCACTCTTCCAAACAAATAATAGCCCAGTGCGATTaGACTTTTCCAACAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TAQSRVRTPFTGHSSKQIIAQCD*TFPTKT Trigger: AGTTTTTGTTGGAAAAGTCCAATCGCACTGGGCTAT...TATTTGTTTGGAAGAGTGCCCTGTAAAGGGGGTTCTTACTCGACTCTGGGCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCGCCAATTCGATCCTCTaGAAATCCATCTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQSARETNESPIPILRVANSIL*KSIFTS Trigger: GGAAGTGAAGATGGATTTTCAGAGGATCGAATTGGC...GACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTGCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGTCAACCAGAGGCAAAAATGTGATGGTGACATCATCATCAGTGTTCCAAGCGTACTTCATCTaGAGTAAGCTGGCGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSTRGKNVMVTSSSVFQAYFI*SKLACN Trigger: ATTGCACGCCAGCTTACTGCAGATGAAGTACGCTTG...GAACACTGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAAAAACTCTGTTCCCACAACAAAGGCAGATAAACTCCTTGAAACCGAGTCGCTGGGATAAGCACTaGGTACATCTGATTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTKTLFPQQRQINSLKPSRWDKH*VHLIAL Trigger: AAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCG...ACTCGGTTTCAAGGAGTTTATCTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTCCCACAGGGAAGACTCCTGGTCCTACGCTaGGATAAGCACTGGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: YLKSPRNGAFFNSFPQGRLLVLR*DKHWVH Trigger: ATGTACCCAGTGCTTATCCCAGCGTAGGACCAGGAG...TCTTCCCTGTGGGAAAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAACTTCAAGTTCCTCCTTaGTACCAACAGCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSARETNESPIPILRVQELQVPP*YQQHQP Trigger: TGGCTGGTGCTGTTGGTACCAAGGAGGAACTTGAAG...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCTGTAAACCAAAGCTCTaGGAATACCACGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQSARETNESPIPILRVCKPKL*EYHDSQ Trigger: CTGGGAATCGTGGTATTCCCAGAGCTTTGGTTTACA...GACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTGCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCATATTCTGTTTAGGATACCACACTAACTTTGAGGCCACCTCAGACCTGATTTTCCATGCTGTATaGAGACTTAACCCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCIFCLGYHTNFEATSDLIFHAV*RLNPWS Trigger: AGACCAAGGGTTAAGTCTTCATACAGCATGGAAAAT...CAGGTCTGAGGTGGCCTCAAAGTTAGTGTGGTATCCTAAACAGAATATGCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTGCCACATCAGCTTAACCCTTGGTCTTaGACTAGAGTCTGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: EEKRKCVYLLLCNCLPHQLNPWS*TRVWTY Trigger: ATATGTCCAGACTCTAGTGCAAGACCAAGGGTTAAG...CTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAACTGAGCAGTTTCTCTTaGTGCTCCTCATTACCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSARETNESPIPILRVQELSSFS*CSSLPS Trigger: GCTAGGTAATGAGGAGCAGCAAGAGAAACTGCTCAG...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAACATCTGATTGCTCTTaGCCAGTTCAAATATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LHLLMQMQSILSCECGTETSDCS*PVQICT Trigger: TGTACATATTTGAACTGGCCAAGAGCAATCAGATGT...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| 3UTR CAA 72 bp | AAATACAGAGGGAACTCAGGAAAGGACACTCAAGAATaGACAATATGCAGAACAAGGCTCAATCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYRGNSGKDTQE*TICRTRLNPEP Trigger: AGGCTCAGGATTGAGCCTTGTTCTGCATATTGTCAATTCTTGAGTGTCCTTTCCTGAGTTCCCTCTGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAAGAGGAAATGTGTGTATTTGCTACTTTGCAACTGCTTGCCACATCAGTTTTGTAGTTGGAGGTaGTCTTCTTTGGCTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: EEKRKCVYLLLCNCLPHQFCSWR*SSLAIT Trigger: GGTAATAGCCAAAGAAGATCACCTCCAACTACAAAA...CTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | GACTTTTCCAACAAAAACTCTGTTCCCACAACAAAGGCAGATAAACTCCTTGAAAATGTCTCCTCCCGATaGCTTGTATGCTTCTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFSNKNSVPTTKADKLLENVSSR*LVCFYG Trigger: GCCATAGAAGCATACAAGTCATCGGGAGGAGACATT...TTCAAGGAGTTTATCTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGGAAAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| 3UTR CAA 72 bp | TTCATTAAAGGGGAGGAGAAGAGGAAATGTGTGTATTaGCTACTTTGCAACTGCTTGCCACATCAGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGEEKRKCVY*LLCNCLPHQSK Trigger: CTTAGACTGATGTGGCAAGCAGTTGCAAAGTAGCAAATACACACATTTCCTCTTCTCCTCCCCTTTAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCTGTACACATGTGGCATaGCCATTTATTTGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQSARETNESPIPILRVCTHVA*PFICIF Trigger: GAAAATGCAAATAAATGGTCATGCCACATGTGTACA...GACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTGCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATAATTTGTACAAAGTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDNLYKVSKSLKQWEMGLSTGYI*LLLASS Trigger: TGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCT...CAGACCCATTTCCCATTGTTTTAGAGATTTGGAAACTTTGTACAAATTATCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGCTAGAGAAACTAATGAAAGCCCCATTCCTATCTTAAGAGTCCAAGAACTGGGTACATCTGATTaGTCTTGGCCAGTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QSARETNESPIPILRVQELGTSD*SWPVQI Trigger: TATTTGAACTGGCCAAGAGCAATCAGATGTACCCAG...TTCTTGGACTCTTAAGATAGGAATGGGGCTTTCATTAGTTTCTCTAGCAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGCATATTCTGTTTAGGATACCACACTAACTTTGAGGCCACCTCAGACCTGCATCGAGCTCTGTCTTaGTCATTAATTATTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCIFCLGYHTNFEATSDLHRALS*SLIIEE Trigger: TTCTTCAATAATTAATGAGCAAGACAGAGCTCGATG...CAGGTCTGAGGTGGCCTCAAAGTTAGTGTGGTATCCTAAACAGAATATGCAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATAATTTGTACAAAGTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGCAATGTGAACAGTCATaGAGGCTGTCATGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VDNLYKVSKSLKQWEMGLQCEQS*RLSCRA Trigger: AGCCCTGCATGACAGCCTGCATGACTGTTCACATTG...CAGACCCATTTCCCATTGTTTTAGAGATTTGGAAACTTTGTACAAATTATCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAATCTACCAACATCACTTaGACCACTTTTAAATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: REEWVPIKLCVVRVTGHKSTNIT*TTFKWI Trigger: GATCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGA...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAATTGCTCATTAATTATTaGAGAAGCCTCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REEWVPIKLCVVRVTGHKLLINY*RSLFSL Trigger: GAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAA...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATAATTTGTACAAAGTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGCAAGCGTACTTCATCTaGAGTAAGCTGGCGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VDNLYKVSKSLKQWEMGLQAYFI*SKLACN Trigger: ATTGCACGCCAGCTTACTGCAGATGAAGTACGCTTG...CAGACCCATTTCCCATTGTTTTAGAGATTTGGAAACTTTGTACAAATTATCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTTCCAACAAAAACTCTGTTCCCACAACAAAGGCAGATAAACTCCTTGAACTCTGCCAACTCTATTaGTTCAATGTTATTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFSNKNSVPTTKADKLLELCQLY*FNVIRS Trigger: AGACCTAATAACATTGAAGCAATAGAGTTGGCAGAG...TTCAAGGAGTTTATCTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGGAAAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
||
| CDS-3UTR CCA 90 bp | GTGGATAATTTGTACAAAGTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGTCTTGCACTAGAGTCTaGACATATCAAAGGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: VDNLYKVSKSLKQWEMGLSCTRV*TYQRTT Trigger: AGTAGTCCTTTGATATGTCCAGACTCTAGTGCAAGA...CAGACCCATTTCCCATTGTTTTAGAGATTTGGAAACTTTGTACAAATTATCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCCCATTCCTATCTTAAGAGTCCAAGAAATGGAGCCTTCTTTAATTCTTTTATTAGGTCTGGGATaGTCACAAACAACACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESPIPILRVQEMEPSLILLLGLG*SQTTHF Trigger: AAAATGTGTTGTTTGTGACCATCCCAGACCTAATAA...AAGAATTAAAGAAGGCTCCATTTCTTGGACTCTTAAGATAGGAATGGGGCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGAGTCCAAGTAACTGTCACATAACCCACCCAGGGATGAGTGAGCCTGCTCAGAGAAGTGGCCCCTaGTATAGCCCAGTGCGATTG | + |
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Preference number: 5 (lower is better) Translates to: RLSPSNCHITHPGMSEPAQRSGP*YSPVRL Trigger: CAATCGCACTGGGCTATACAAGGGGCCACTTCTCTG...AGCAGGCTCACTCATCCCTGGGTGGGTTATGTGACAGTTACTTGGACTCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | AGCACCAGCACCTCGGTTGCCATAGCCATCGTTCTCCATGGCAACCAAAGCAGACGACACATAGTACACTaGATTGCAGACGGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: STSTSVAIAIVLHGNQSRRHIVH*IADGQF Trigger: AAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCG...TCTGCTTTGGTTGCCATGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| CDS-3UTR CAA 90 bp | ACTAGAACTCCCCCTTCAGTCACACAGCAGTCCAGCCACTCTCTGAGCAGTTTCACACCCACACAGGCATaGAGGAATAGCCAATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TRTPPSVTQQSSHSLSSFTPTQA*RNSQSV Trigger: GACTGATTGGCTATTCCTCAATGCCTGTGTGGGTGT...GAAACTGCTCAGAGAGTGGCTGGACTGCTGTGTGACTGAAGGGGGAGTTCTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| CDS TCA 90 bp | CTGTGGGACTCCTGGTCCTACGCTGGGATAAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCAAATATGTACACATGTGGCATGACC | + |
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Preference number: 5 (lower is better) Translates to: LWDSWSYAGISTGYI*LLLASSNMYTCGMT Trigger: GGTCATGCCACATGTGTACATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCGTAGGACCAGGAGTCCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 90 bp | AAAGCAGAAGGACGGTTCAGCAAGCGTACTTCATCTGCAGTAAGCTaGCGTGCAATGTCTCCTCCCGATGACTTGTATGCTTCTATGGCT | + |
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Preference number: 5 (lower is better) Translates to: KAEGRFSKRTSSAVS*RAMSPPDDLYASMA Trigger: AGCCATAGAAGCATACAAGTCATCGGGAGGAGACATTGCACGCCAGCTTACTGCAGATGAAGTACGCTTGCTGAACCGTCCTTCTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS-3UTR CAA 90 bp | CTCCATCTCCTCATGCAGATGCAGTCAATTCTCTCCTGTGAGTGTGGAACAGAAACTTCAAGTTCCTCCTaGGTACCAACAGCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LHLLMQMQSILSCECGTETSSSS*VPTAPA Trigger: GGCTGGTGCTGTTGGTACCAAGGAGGAACTTGAAGT...TTCTGTTCCACACTCACAGGAGAGAATTGACTGCATCTGCATGAGGAGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | TCCATCCATCCATCCAGGGTAGAAGTGCACAAATGCACCGCCCAGAGTCGAGTATATTTCTCTCCGGATTaGCTCTGTCAGTTCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SIHPSRVEVHKCTAQSRVYFSPD*LCQFRT Trigger: TGTCCTGAACTGACAGAGCAAATCCGGAGAGAAATA...TACTCGACTCTGGGCGGTGCATTTGTGCACTTCTACCCTGGATGGATGGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS GCA 90 bp | TGGCTATTACCACTACTGCAGCCTCCCCTCCATCGAGCTCTGTCTTaGTCATTAATTATTGAAGAAGCCTCTTCAGTCTCTGCCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: WLLPLLQPPLHRALS*SLIIEEASSVSANS Trigger: AGAGTTGGCAGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGGGGAGGCTGCAGTAGTGGTAATAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS-3UTR CAA 90 bp | GCAGAACAAGGCTCAATCCTGAGCCTGACTCTGTACCACAAGGTTTGGGTACAACCATTTTTCTACCATTaGTGTGACCAAGGGGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: AEQGSILSLTLYHKVWVQPFFYH*CDQGVV Trigger: AACCACCCCTTGGTCACACAAATGGTAGAAAAATGG...TTGTACCCAAACCTTGTGGTACAGAGTCAGGCTCAGGATTGAGCCTTGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | GTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGGTGTGGTGGGAGCAGGATTGGCTGGAATACACTTaGCTGCTTGCTGAGATACCT | + |
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Preference number: 5 (lower is better) Translates to: VSKSLKQWEMGLVWWEQDWLEYT*LLAEIP Trigger: AGGTATCTCAGCAAGCAGCAAAGTGTATTCCAGCCA...ATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGATTTGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS TCA 90 bp | ACTGCAGCCTCCCCTCCATCGAGCTCTGTCTTGCTCATTAATTATTaGAGAAGCCTCTTCAGTCTCTGCCAACTCTATTGCTTCAATGTT | + |
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Preference number: 5 (lower is better) Translates to: TAASPPSSSVLLINY*RSLFSLCQLYCFNV Trigger: AACATTGAAGCAATAGAGTTGGCAGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGGGGAGGCTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 90 bp | TATTTCTCTCCGGATTTGCTCTGTCAGTTCAGGACACACCATGGCTaGAATACACTTTGCTGCTTGCTGAGATACCTCTGTAAGCAATAT | + |
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Preference number: 5 (lower is better) Translates to: YFSPDLLCQFRTHHG*NTLCCLLRYLCKQY Trigger: ATATTGCTTACAGAGGTATCTCAGCAAGCAGCAAAGTGTATTCCAGCCATGGTGTGTCCTGAACTGACAGAGCAAATCCGGAGAGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000215716.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGAATGGGTACCTATCAAATTATGTGTGGTCAGGGTCACTGGTCATAAACGACACATAGTACACTaGATTGCAGACGGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: REEWVPIKLCVVRVTGHKRHIVH*IADGQF Trigger: AAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCG...TTTATGACCAGTGACCCTGACCACACATAATTTGATAGGTACCCATTCTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | GTTTCCAAATCTCTAAAACAATGGGAAATGGGTCTGGTGTGGTGGGAGCAGGATAAAAAGCAACTGGTCTaGAACCAGATCCTGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: VSKSLKQWEMGLVWWEQDKKQLV*NQILRI Trigger: AATCCTCAGGATCTGGTTCAAGACCAGTTGCTTTTT...ATCCTGCTCCCACCACACCAGACCCATTTCCCATTGTTTTAGAGATTTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS-3UTR CAA 90 bp | TGTACAAGGCCGGATCTGTCTGTAGCGGTCAAGCCATTTTTCTACCATTTGTGTAAAAAGCAACTGGTCTaGAACCAGATCCTGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: CTRPDLSVAVKPFFYHLCKKQLV*NQILRI Trigger: AATCCTCAGGATCTGGTTCAAGACCAGTTGCTTTTT...ACACAAATGGTAGAAAAATGGCTTGACCGCTACAGACAGATCCGGCCTTGTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210507.2 |
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| CDS-3UTR CAA 90 bp | TGCTGCATATTCTGTTTAGGATACCACACTAACTTTGAGGCCACCTCAGACCTGAATACACTTTGCTGCTaGCTGAGATACCTCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: CCIFCLGYHTNFEATSDLNTLCC*LRYLCK Trigger: CTTACAGAGGTATCTCAGCAAGCAGCAAAGTGTATT...CAGGTCTGAGGTGGCCTCAAAGTTAGTGTGGTATCCTAAACAGAATATGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS CCA 90 bp | CCACTTTTAAATGGATCTTCTGTAATAATTGTTCCACTGGGTCTCTaGGCACGACACATAGTACACTTGATTGCAGACGGCCAGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: PLLNGSSVIIVPLGL*ARHIVHLIADGQFS Trigger: TGAAAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS TCA 90 bp | TCCACCTTCAGTACTGGAAGGATCCCAATCTCTACCAACATCACTTaGACCACTTTTAAATGGATCTTCTGTAATAATTGTTCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: STFSTGRIPISTNIT*TTFKWIFCNNCSTG Trigger: CCCAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGTACTGAAGGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS-3UTR CAA 90 bp | TATCATCTTTTACAAAGGACGGCATTACACTTTCTTGGGACAATAATTATGGCTACACCCACACAGGCATaGAGGAATAGCCAATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YHLLQRTALHFLGTIIMATPTQA*RNSQSV Trigger: GACTGATTGGCTATTCCTCAATGCCTGTGTGGGTGT...AGCCATAATTATTGTCCCAAGAAAGTGTAATGCCGTCCTTTGTAAAAGATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106157.8 |
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| CDS TCA 90 bp | GTTTTCATACGTACAATATTCACAGGCCCACTTAATCCCATGTTCTaGCATTGTGTACTTCTTGAAGTGAGTTATGTCAGGCAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFIRTIFTGPLNPMF*HCVLLEVSYVRQEV Trigger: TACTTCCTGCCTGACATAACTCACTTCAAGAAGTACACAATGTCAGAACATGGGATTAAGTGGGCCTGTGAATATTGTACGTATGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215716.2 |
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| CDS GCA 90 bp | TTAGCCTTAGCCCAGTTTTCATATGTGCAAACAGAACAAGTCCAATaGTGGGTCCTTGTATTCAATTTATTTCTATCATTGTATTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LALAQFSYVQTEQVQ*WVLVFNLFLSLYSS Trigger: TGAAGAATACAATGATAGAAATAAATTGAATACAAGGACCCAGCATTGGACTTGTTCTGTTTGCACATATGAAAACTGGGCTAAGGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 72 bp | GTGCAATGTCTCCTCCCGATGACTTGTATGCTTCTATaGCTGCTAAGTCACCTTCCACAACACCCACACAGG | + |
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Preference number: 6 (lower is better) Translates to: VQCLLPMTCMLL*LLSHLPQHPHR Trigger: CCTGTGTGGGTGTTGTGGAAGGTGACTTAGCAGCCATAGAAGCATACAAGTCATCGGGAGGAGACATTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 72 bp | GCAGTAAGCTGGCGTGCAATGTCTCCTCCCGATGACTaGTATGCTTCTATGGCTGCTAAGTCACCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: AVSWRAMSPPDD*YASMAAKSPST Trigger: TGTGGAAGGTGACTTAGCAGCCATAGAAGCATACAAGTCATCGGGAGGAGACATTGCACGCCAGCTTACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 90 bp | ACTTCATCTGCAGTAAGCTGGCGTGCAATGTCTCCTCCCGATGACTaGTATGCTTCTATGGCTGCTAAGTCACCTTCCACAACACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TSSAVSWRAMSPPDD*YASMAAKSPSTTPT Trigger: TGTGGGTGTTGTGGAAGGTGACTTAGCAGCCATAGAAGCATACAAGTCATCGGGAGGAGACATTGCACGCCAGCTTACTGCAGATGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 72 bp | TCTGTGGGACTCCTGGTCCTACGCTGGGATAAGCACTaGGTACATCTGATTGCTCTTGGCCAGTTCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: SVGLLVLRWDKH*VHLIALGQFKY Trigger: ATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCGTAGGACCAGGAGTCCCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 72 bp | CCGGATTTGCTCTGTCAGTTCAGGACACACCATGGCTaGAATACACTTTGCTGCTTGCTGAGATACCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PDLLCQFRTHHG*NTLCCLLRYLC Trigger: ACAGAGGTATCTCAGCAAGCAGCAAAGTGTATTCCAGCCATGGTGTGTCCTGAACTGACAGAGCAAATCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000215716.2 |
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| CDS TCA 72 bp | CATCTTCACTTCCGAGTCCCGTTTTGTAGTTGGAGGTaGTCTTCTTTGGCTATTACCACTACTGCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLHFRVPFCSWR*SSLAITTTAAS Trigger: GGAGGCTGCAGTAGTGGTAATAGCCAAAGAAGATCACCTCCAACTACAAAACGGGACTCGGAAGTGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS GCA 72 bp | CCACTACTGCAGCCTCCCCTCCATCGAGCTCTGTCTTaGTCATTAATTATTGAAGAAGCCTCTTCAGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLQPPLHRALS*SLIIEEASSVS Trigger: AGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGGGGAGGCTGCAGTAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 72 bp | TCTCTGGTGAAGAGAAGCAGCTATTTCTCTCCGGATTaGCTCTGTCAGTTCAGGACACACCATGGCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLVKRSSYFSPD*LCQFRTHHGWN Trigger: ATTCCAGCCATGGTGTGTCCTGAACTGACAGAGCAAATCCGGAGAGAAATAGCTGCTTCTCTTCACCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000215716.2 |
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| CDS TCA 72 bp | TCCTGGTCCTACGCTGGGATAAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCAAATATGTACACATGT | + |
|
Preference number: 6 (lower is better) Translates to: SWSYAGISTGYI*LLLASSNMYTC Trigger: ACATGTGTACATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAGCGTAGGACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS TCA 72 bp | TCCTTGGTACCAACAGCACCAGCCAATTCGATCCTCTaGAAATCCATCTTCACTTCCGAGTCCCGTTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLVPTAPANSIL*KSIFTSESRFV Trigger: TACAAAACGGGACTCGGAAGTGAAGATGGATTTTCAGAGGATCGAATTGGCTGGTGCTGTTGGTACCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 72 bp | GTTCCACTGGGTCTCTGGGCACGACACATAGTACACTaGATTGCAGACGGCCAGTTTTCATACGTACAATAT | + |
|
Preference number: 6 (lower is better) Translates to: VPLGLWARHIVH*IADGQFSYVQY Trigger: ATATTGTACGTATGAAAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 90 bp | GTAATAATTGTTCCACTGGGTCTCTGGGCACGACACATAGTACACTaGATTGCAGACGGCCAGTTTTCATACGTACAATATTCACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VIIVPLGLWARHIVH*IADGQFSYVQYSQA Trigger: GGCCTGTGAATATTGTACGTATGAAAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAACAATTATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS TCA 72 bp | TCCCCTCCATCGAGCTCTGTCTTGCTCATTAATTATTaGAGAAGCCTCTTCAGTCTCTGCCAACTCTATTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPPSSSVLLINY*RSLFSLCQLYC Trigger: GCAATAGAGTTGGCAGAGACTGAAGAGGCTTCTTCAATAATTAATGAGCAAGACAGAGCTCGATGGAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS GCA 72 bp | ACTGGGTCTCTGGGCACGACACATAGTACACTTGATTaGAGACGGCCAGTTTTCATACGTACAATATTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TGSLGTTHSTLD*RRPVFIRTIFT Trigger: TGTGAATATTGTACGTATGAAAACTGGCCGTCTGCAATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 72 bp | AATGGATCTTCTGTAATAATTGTTCCACTGGGTCTCTaGGCACGACACATAGTACACTTGATTGCAGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: NGSSVIIVPLGL*ARHIVHLIADG Trigger: GCCGTCTGCAATCAAGTGTACTATGTGTCGTGCCCAGAGACCCAGTGGAACAATTATTACAGAAGATCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CCA 72 bp | CTGGACATATCAAAGGACTACTTCCACCTTCAGTACTaGAAGGATCCCAATCTCTACCAACATCACTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LDISKDYFHLQY*KDPNLYQHHLN Trigger: GTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGTACTGAAGGTGGAAGTAGTCCTTTGATATGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS TCA 72 bp | CTGCTAAGTCACCTTCCACAACACCCACACAGGCATTaGGGAATAGCCAATCAGTCTTTTTCATCCTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLSHLPQHPHRH*GIANQSFSSYF Trigger: AAAATAGGATGAAAAAGACTGATTGGCTATTCCTCAATGCCTGTGTGGGTGTTGTGGAAGGTGACTTAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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| CDS CAA 90 bp | CCCAGTTTTCATATGTGCAAACAGAACAAGTCCAATGCTGGGTCCTaGTATTCAATTTATTTCTATCATTGTATTCTTCACAAGGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSFHMCKQNKSNAGS*YSIYFYHCILHKDQ Trigger: TTGATCCTTGTGAAGAATACAATGATAGAAATAAATTGAATACAAGGACCCAGCATTGGACTTGTTCTGTTTGCACATATGAAAACTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033265.5 ENSMUST00000106157.8 ENSMUST00000210507.2 ENSMUST00000215716.2 |
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