Pregenerated sensors for ZPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032078Ensembl transcript IDs: ENSMUST00000114552.4, ENSMUST00000125239.9, ENSMUST00000156440.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAAAGGTCCAGCACTGGAGGTCAGAGAGCTGACAGGCAAACGGTaGTGGCAGACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGAC | + |
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Preference number: 1 (lower is better) Translates to: FKGPALEVRELTGKR*WQTAWCFWDSSHAD Trigger: GTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGTCTGCCATCACCGTTTGCCTGTCAGCTCTCTGACCTCCAGTGCTGGACCTTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| 3UTR TCA 90 bp | TCACTTCCCCAGACTTCAAAGGTCCAGCACTGGAGGTCAGAGAGCTaGCAGGCAAACGGTGATGGCAGACCGCCTGGTGTTTCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: SLPQTSKVQHWRSES*QANGDGRPPGVSGI Trigger: AATCCCAGAAACACCAGGCGGTCTGCCATCACCGTTTGCCTGTCAGCTCTCTGACCTCCAGTGCTGGACCTTTGAAGTCTGGGGAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR TCA 90 bp | CGTCTTCACCTGTGCCTGCTCGGCCCCTCCGACATCCTTCCCTGCTaGGTCAGTACTTCACATGCCCAGAGCCAGCAGAAACTTGTATTT | + |
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Preference number: 1 (lower is better) Translates to: RLHLCLLGPSDILPC*VSTSHAQSQQKLVF Trigger: AAATACAAGTTTCTGCTGGCTCTGGGCATGTGAAGTACTGACTCAGCAGGGAAGGATGTCGGAGGGGCCGAGCAGGCACAGGTGAAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR CCA 90 bp | GATGAGTCCTTCAACAGTGGTCAGAGCTCCCTTCTGGCTGAAGGCTaGAATCTCAAAATCCAGCTCGGGGATCCTTGTGGTGGCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: DESFNSGQSSLLAEG*NLKIQLGDPCGGRV Trigger: GACTCTGCCACCACAAGGATCCCCGAGCTGGATTTTGAGATTCCAGCCTTCAGCCAGAAGGGAGCTCTGACCACTGTTGAAGGACTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| 3UTR CCA 90 bp | ATCGCACGGCTGATGAGTCCTTCAACAGTGGTCAGAGCTCCCTTCTaGCTGAAGGCTGGAATCTCAAAATCCAGCTCGGGGATCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: IARLMSPSTVVRAPF*LKAGISKSSSGILV Trigger: CACAAGGATCCCCGAGCTGGATTTTGAGATTCCAGCCTTCAGCCAGAAGGGAGCTCTGACCACTGTTGAAGGACTCATCAGCCGTGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| 3UTR CCA 90 bp | ACTCCACACAGGTGTACCTGGCTCAGAGCAGACAGGATGGCCTATTaGAGTGAATCAAATGCTGCCTCTACAGCAGCCACCTCAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: TPHRCTWLRADRMAY*SESNAASTAATSRK Trigger: CTTTCTTGAGGTGGCTGCTGTAGAGGCAGCATTTGATTCACTCCAATAGGCCATCCTGTCTGCTCTGAGCCAGGTACACCTGTGTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR GCA 90 bp | GGATTAAAGGTGTGTGCCACCCTGCTTTTCCAGACTGCTTTAAGCTaGATGAGAACAGCTAGACTCCACACAGGTGTACCTGGCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GLKVCATLLFQTALS*MRTARLHTGVPGSE Trigger: CTCTGAGCCAGGTACACCTGTGTGGAGTCTAGCTGTTCTCATGCAGCTTAAAGCAGTCTGGAAAAGCAGGGTGGCACACACCTTTAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR TCA 90 bp | ACACAGGTGTACCTGGCTCAGAGCAGACAGGATGGCCTATTGGAGTaGATCAAATGCTGCCTCTACAGCAGCCACCTCAAGAAAGATTTG | + |
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Preference number: 1 (lower is better) Translates to: TQVYLAQSRQDGLLE*IKCCLYSSHLKKDL Trigger: CAAATCTTTCTTGAGGTGGCTGCTGTAGAGGCAGCATTTGATTCACTCCAATAGGCCATCCTGTCTGCTCTGAGCCAGGTACACCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR TCA 90 bp | CAAACAAGGATGGTGCTGGTTATCCAGTTTGAATTCGTTTTGTCTTaGATCAGGGTTTTTCTGTGTAGCCCAGGCTGTCCTGGAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: QTRMVLVIQFEFVLS*IRVFLCSPGCPGTS Trigger: GGAAGTTCCAGGACAGCCTGGGCTACACAGAAAAACCCTGATTCAAGACAAAACGAATTCAAACTGGATAACCAGCACCATCCTTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGATGGCACCTTCCACTGCCCGTCGTGTGGGCTGATCCTGTTCCAGGCCAGACGGGGATCCTTGTGGTaGCAGAGTCTGTCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: CDGTFHCPSCGLILFQARRGSLW*QSLSLP Trigger: TGGTAAAGACAGACTCTGCCACCACAAGGATCCCCG...TCTGGCCTGGAACAGGATCAGCCCACACGACGGGCAGTGGAAGGTGCCATCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAGACTCCACACAGGTGTACCTGGCTCAGAGCAGACAGGATGGCCTATTGAAGACGGACTCTCACTaGATGGCCCAAGCTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: QLDSTQVYLAQSRQDGLLKTDSH*MAQAVL Trigger: GAGGACAGCTTGGGCCATGCAGTGAGAGTCCGTCTT...CAATAGGCCATCCTGTCTGCTCTGAGCCAGGTACACCTGTGTGGAGTCTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGCCATGGACGAGGGCTTaGGCACTCCTCGTCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: AWCFWDSSHADFKTSKRRPWTRA*ALLVSS Trigger: GGAACTGACGAGGAGTGCTCAAGCCCTCGTCCATGG...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTGTATTTCACTTCCCCAGACTTCAAAGGTCCAGCACTGGAGGTCAGAGAGCCATGGACGAGGGCTTaGGCACTCCTCGTCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: NLYFTSPDFKGPALEVREPWTRA*ALLVSS Trigger: GGAACTGACGAGGAGTGCTCAAGCCCTCGTCCATGG...CTCTCTGACCTCCAGTGCTGGACCTTTGAAGTCTGGGGAAGTGAAATACAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGTCCTGGAACTTCCTCTGTAGACCAAATCGGCTTCAAACTCATAGAACCCGGACTCTCACTGCATaGCCCAAGCTGTCCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: RLSWNFLCRPNRLQTHRTRTLTA*PKLSSV Trigger: GACTGAGGACAGCTTGGGCCATGCAGTGAGAGTCCG...GGTTCTATGAGTTTGAAGCCGATTTGGTCTACAGAGGAAGTTCCAGGACAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTAAATTGCCTAAGCTGCCCCTGAATTTGTTAGCCTTCCTCCTCAGCCTCCAGACTGCTTTAAGCTaGATGAGAACAGCTAGACTC | + |
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Preference number: 2 (lower is better) Translates to: RSKLPKLPLNLLAFLLSLQTALS*MRTARL Trigger: GAGTCTAGCTGTTCTCATGCAGCTTAAAGCAGTCTG...GAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGGCAATTTAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR CCA 90 bp | AGTACAGGAACCCACACATCTTCATACTGCCTGGCTCTAATTTTTGCTAGCAGAGCCATCACTTTAATGTaGCGTCTTCACCTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: STGTHTSSYCLALIFASRAITLM*RLHLCL Trigger: CAGGCACAGGTGAAGACGCCACATTAAAGTGATGGC...TCTGCTAGCAAAAATTAGAGCCAGGCAGTATGAAGATGTGTGGGTTCCTGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTAAATTGCCTAAGCTGCCCCTGAATTTGTTAGCCTTCCTCCTCAGCCTCGCCAAACAAGGATGGTaGTGGTTATCCAGTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: RSKLPKLPLNLLAFLLSLAKQGW*WLSSLN Trigger: ATTCAAACTGGATAACCAGCACCATCCTTGTTTGGC...GAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGGCAATTTAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGGATTAAACCCAAGGCCTTTTGCACATGGTATGCAGGAGTTCTATAGAACTCCTCATTTCTTTTCATaGAGACGGACTCTCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: RGLNPRPFAHGMQEFYRTPHFFS*RRTLTA Trigger: TGCAGTGAGAGTCCGTCTTCATGAAAAGAAATGAGG...AGTTCTATAGAACTCCTGCATACCATGTGCAAAAGGCCTTGGGTTTAATCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR GCA 90 bp | AGTACAGGAACCCACACATCTTCATACTGCCTGGCTCTAATTTTTGCTAGCAGACCTGCTTTTCCAGACTaGTTTAAGCTGCATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: STGTHTSSYCLALIFASRPAFPD*FKLHEN Trigger: GTTCTCATGCAGCTTAAAGCAGTCTGGAAAAGCAGG...TCTGCTAGCAAAAATTAGAGCCAGGCAGTATGAAGATGTGTGGGTTCCTGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTCAAGAAAGATTTGCTTAGGAAACTAAACTGGTTTTTCCTTCCTCATTTCACCGCCTGGTGTTTCTaGGATTCTTCTCACGCCGAC | + |
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Preference number: 2 (lower is better) Translates to: HLKKDLLRKLNWFFLPHFTAWCF*DSSHAD Trigger: GTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT...GAAATGAGGAAGGAAAAACCAGTTTAGTTTCCTAAGCAAATCTTTCTTGAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR CCA 72 bp | TTCTCTCTGCGATGGCACCTTCCACTGCCCGTCGTGTaGGCTGATCCTGTTCCAGGCCAGAGATCGCACGGC | + |
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Preference number: 3 (lower is better) Translates to: FSLRWHLPLPVV*ADPVPGQRSHG Trigger: GCCGTGCGATCTCTGGCCTGGAACAGGATCAGCCCACACGACGGGCAGTGGAAGGTGCCATCGCAGAGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| 3UTR TCA 72 bp | CTGTGCCTGCTCGGCCCCTCCGACATCCTTCCCTGCTaGGTCAGTACTTCACATGCCCAGAGCCAGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LCLLGPSDILPC*VSTSHAQSQQK Trigger: TTTCTGCTGGCTCTGGGCATGTGAAGTACTGACTCAGCAGGGAAGGATGTCGGAGGGGCCGAGCAGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR TCA 72 bp | CAGACTTCAAAGGTCCAGCACTGGAGGTCAGAGAGCTaGCAGGCAAACGGTGATGGCAGACCGCCTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: QTSKVQHWRSES*QANGDGRPPGV Trigger: AACACCAGGCGGTCTGCCATCACCGTTTGCCTGTCAGCTCTCTGACCTCCAGTGCTGGACCTTTGAAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| 3UTR TCA 72 bp | TACCTGGCTCAGAGCAGACAGGATGGCCTATTGGAGTaGATCAAATGCTGCCTCTACAGCAGCCACCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: YLAQSRQDGLLE*IKCCLYSSHLK Trigger: CTTGAGGTGGCTGCTGTAGAGGCAGCATTTGATTCACTCCAATAGGCCATCCTGTCTGCTCTGAGCCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR GCA 72 bp | CCTTCCTCATTTCTTTTCATGAAGACGGACTCTCACTaGATGGCCCAAGCTGTCCTCAGTCTCCTCGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: PSSFLFMKTDSH*MAQAVLSLLGA Trigger: AGCTCCGAGGAGACTGAGGACAGCTTGGGCCATGCAGTGAGAGTCCGTCTTCATGAAAAGAAATGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR CCA 72 bp | CTCCACACAGGTGTACCTGGCTCAGAGCAGACAGGATaGCCTATTGGAGTGAATCAAATGCTGCCTCTACAG | + |
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Preference number: 3 (lower is better) Translates to: LHTGVPGSEQTG*PIGVNQMLPLQ Trigger: CTGTAGAGGCAGCATTTGATTCACTCCAATAGGCCATCCTGTCTGCTCTGAGCCAGGTACACCTGTGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR GCA 72 bp | GTGTGTGCCACCCTGCTTTTCCAGACTGCTTTAAGCTaGATGAGAACAGCTAGACTCCACACAGGTGTACCT | + |
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Preference number: 3 (lower is better) Translates to: VCATLLFQTALS*MRTARLHTGVP Trigger: AGGTACACCTGTGTGGAGTCTAGCTGTTCTCATGCAGCTTAAAGCAGTCTGGAAAAGCAGGGTGGCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR GCA 72 bp | ATAGAACCACCTGCCTCTGCTGGGATTAAAGGTGTGTaGCACCCTGCTTTTCCAGACTGCTTTAAGCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: IEPPASAGIKGV*HPAFPDCFKLH Trigger: ATGCAGCTTAAAGCAGTCTGGAAAAGCAGGGTGGCACACACCTTTAATCCCAGCAGAGGCAGGTGGTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR CCA 72 bp | CCTGAATTTGTTAGCCTTCCTCCTCAGCCTCTCAAGTaGCTGGACACCATGACCTACCCTTCAGTTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: PEFVSLPPQPLK*LDTMTYPSVLL Trigger: TAATAAAACTGAAGGGTAGGTCATGGTGTCCAGCCACTTGAGAGGCTGAGGAGGAAGGCTAACAAATTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| 3UTR TCA 72 bp | ATGGTGCTGGTTATCCAGTTTGAATTCGTTTTGTCTTaGATCAGGGTTTTTCTGTGTAGCCCAGGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: MVLVIQFEFVLS*IRVFLCSPGCP Trigger: AGGACAGCCTGGGCTACACAGAAAAACCCTGATTCAAGACAAAACGAATTCAAACTGGATAACCAGCACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGTGCCTGCTCGGCCCCTCCGACATCCTTCCCTGCTGAGTCAGTACTTCAGGCCCGGTGGCTGGTaGCGCAGCCGCAGCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SPVPARPLRHPSLLSQYFRPGGW*RSRSGR Trigger: TCGCCCGCTGCGGCTGCGTCACCAGCCACCGGGCCT...GAAGTACTGACTCAGCAGGGAAGGATGTCGGAGGGGCCGAGCAGGCACAGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAAGGCCCGGTGGCTGGTaGCGCAGCCGCAGCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSRPGGW*RSRSGR Trigger: TCGCCCGCTGCGGCTGCGTCACCAGCCACCGGGCCT...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGCTGGAATCTCAAAATCCAGCTCGGGGATCCTTGTGGTGGCAGAGTCAGGCCCGGTGGCTGGTaGCGCAGCCGCAGCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: AEGWNLKIQLGDPCGGRVRPGGW*RSRSGR Trigger: TCGCCCGCTGCGGCTGCGTCACCAGCCACCGGGCCT...GACTCTGCCACCACAAGGATCCCCGAGCTGGATTTTGAGATTCCAGCCTTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGCTGGAATCTCAAAATCCAGCTCGGGGATCCTTGTGGTGGCAGAGTCCCTCATCCTCGGCGCTaGGGGGCCGGAACAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AEGWNLKIQLGDPCGGRVPHPRR*GAGTKA Trigger: GGCCTTTGTTCCGGCCCCTCAGCGCCGAGGATGAGG...GACTCTGCCACCACAAGGATCCCCGAGCTGGATTTTGAGATTCCAGCCTTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| CDS-3UTR CCA 90 bp | GCCAGAGATCGCACGGCTGATGAGTCCTTCAACAGTGGTCAGAGCTCCCTTCTGGTGACTCGATCTCGGTaGGCTGTTGCTCCTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: ARDRTADESFNSGQSSLLVTRSR*AVAPHP Trigger: AGGATGAGGAGCAACAGCCCACCGAGATCGAGTCAC...CAGAAGGGAGCTCTGACCACTGTTGAAGGACTCATCAGCCGTGCGATCTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125239.9 |
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| CDS-3UTR CCA 90 bp | TCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAGCTGCTAATCTTGGGTTGAACTGGAGCACTTaGAGCCCCAGCATCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SRSTVGLQLPRPSAANLGLNWST*SPSISA Trigger: AGCTGAGATGCTGGGGCTCCAAGTGCTCCAGTTCAA...CCCAAGATTAGCAGCTGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114552.4 |
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| CDS-3UTR TCA 90 bp | CTCGTCCGTCAGCTGCTAATCTTGGGTGCTTACATTTCTAACTCAAGTGGTAACCCTCATCCTCGGCGCTaGGGGGCCGGAACAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVRQLLILGAYISNSSGNPHPRR*GAGTKA Trigger: GGCCTTTGTTCCGGCCCCTCAGCGCCGAGGATGAGG...GTTACCACTTGAGTTAGAAATGTAAGCACCCAAGATTAGCAGCTGACGGACGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAAGCTGTCGCCCAGTGTaGATGGGTTCTTGGTTACCA | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSSCRPV*MGSWLP Trigger: TGGTAACCAAGAACCCATTCACACTGGGCGACAGCT...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR GCA 90 bp | TCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAGCTGCTAATCTTGGGCTCATCAATTCTCTCTaGGATGGCACCTTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SRSTVGLQLPRPSAANLGLINSL*DGTFHC Trigger: GCAGTGGAAGGTGCCATCGCAGAGAGAATTGATGAG...CCCAAGATTAGCAGCTGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCACGGGGATCCTTGTGGTaGCAGAGTCTGTCTTTACCA | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSRGSLW*QSLSLP Trigger: TGGTAAAGACAGACTCTGCCACCACAAGGATCCCCG...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAGCTCGGGGATCCTTGTaGTGGCAGAGTCTGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSARGSL*WQSLSL Trigger: TAAAGACAGACTCTGCCACCACAAGGATCCCCGAGC...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR GCA 90 bp | TCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAGCTGCTAATCTTGGGCATTTTGGTCAAAGGTaGGTTTGTACCGCTCGACCT | + |
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Preference number: 4 (lower is better) Translates to: SRSTVGLQLPRPSAANLGHFGQR*VCTARP Trigger: AGGTCGAGCGGTACAAACGCACCTTTGACCAAAATG...CCCAAGATTAGCAGCTGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCAGTCGCCCAGTGTGAATaGGTTCTTGGTTACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSVAQCE*VLGYQF Trigger: GAACTGGTAACCAAGAACCCATTCACACTGGGCGAC...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | GCCGACTTTAAAACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGAGCTTCATGTTGGTCTaGGCCGGAGCGTTGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: ADFKTSKRRSRSTVGLQLSFMLV*AGALHS Trigger: AGAGTGCAACGCTCCGGCTCAGACCAACATGAAGCT...CAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGTTTTAAAGTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR TCA 90 bp | GCCGACTTTAAAACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGTCATCTTGCCCTCGATaGTCTGGCCCAACTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ADFKTSKRRSRSTVGLQLSSCPR*SGPTSG Trigger: GCCAGAAGTTGGGCCAGATCATCGAGGGCAAGATGA...CAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGTTTTAAAGTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGCCTCGTCCGTCATGCAGTTTCTCTGACTaGTCAGGATTAGAGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TSKRRSRSTVGLQLPRPSCSFSD*SGLELS Trigger: CGACAGCTCTAATCCTGACCAGTCAGAGAAACTGCA...TGACGGACGAGGCAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR GCA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGACTCCTCTGGTGCTTCTaGTTGGAGCCCCAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAWCFWDSSHADFKTSKRLLWCF*LEPQHL Trigger: GAGATGCTGGGGCTCCAAGCAGAAGCACCAGAGGAG...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCGCCTTCTCCTCTGGTaGTTCTGCTTGGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGRLLLW*FCLEPQ Trigger: CTGGGGCTCCAAGCAGAAGCACCAGAGGAGAAGGCG...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTCCTGGAACTTCCTCTGTAGACCAAATCGGCTTCAAACTCATAGAACCTTCCGCCTTCTCCTCTaGTGCTTCTGCTTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSWNFLCRPNRLQTHRTFRLLL*CFCLEP Trigger: GGGCTCCAAGCAGAAGCACCAGAGGAGAAGGCGGAA...GGTTCTATGAGTTTGAAGCCGATTTGGTCTACAGAGGAAGTTCCAGGACAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGAGCTTCATGTTGGTCTaGGCCGGAGCGTTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWCFWDSSHADFKTSKRRSFMLV*AGALHS Trigger: AGAGTGCAACGCTCCGGCTCAGACCAACATGAAGCT...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | CCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAATCATCTTGCCCTCGATaGTCTGGCCCAACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVSGILLTPTLKPPKESSCPR*SGPTSG Trigger: GCCAGAAGTTGGGCCAGATCATCGAGGGCAAGATGA...TTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | GCCGACTTTAAAACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGTTGCCCTCGATGATCTaGCCCAACTTCTGGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ADFKTSKRRSRSTVGLQLLPSMI*PNFWLN Trigger: GTTTAGCCAGAAGTTGGGCCAGATCATCGAGGGCAA...CAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGTTTTAAAGTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGTATTTCACTTCCCCAGACTTCAAAGGTCCAGCACTGGAGGTCAGAGAGTCTGGTGCTTCTGCTTaGAGCCCCAGCATCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLYFTSPDFKGPALEVRESGASA*SPSISA Trigger: AGCTGAGATGCTGGGGCTCCAAGCAGAAGCACCAGA...CTCTCTGACCTCCAGTGCTGGACCTTTGAAGTCTGGGGAAGTGAAATACAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGAGCTGTCGCCCAGTGTaGATGGGTTCTTGGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: AWCFWDSSHADFKTSKRRSCRPV*MGSWLP Trigger: TGGTAACCAAGAACCCATTCACACTGGGCGACAGCT...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CTCGTCCGTCAGCTGCTAATCTTGGGTGCTTACATTTCTAACTCAAGTGGTAACGTGACTCGATCTCGGTaGGCTGTTGCTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRQLLILGAYISNSSGNVTRSR*AVAPHP Trigger: AGGATGAGGAGCAACAGCCCACCGAGATCGAGTCAC...GTTACCACTTGAGTTAGAAATGTAAGCACCCAAGATTAGCAGCTGACGGACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | GCCTATTGGAGTGAATCAAATGCTGCCTCTACAGCAGCCACCTCAAGAAAGATTGTGACTCGATCTCGGTaGGCTGTTGCTCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AYWSESNAASTAATSRKIVTRSR*AVAPHP Trigger: AGGATGAGGAGCAACAGCCCACCGAGATCGAGTCAC...AATCTTTCTTGAGGTGGCTGCTGTAGAGGCAGCATTTGATTCACTCCAATAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAGAGCTCCCTTCTGGCTaGAGGCTGGAATCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAWCFWDSSHADFKTSKRELPSG*RLESQN Trigger: ATTTTGAGATTCCAGCCTTCAGCCAGAAGGGAGCTC...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGCTCCTGCAGTTTCTCTaGCTGGTCAGGATTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWCFWDSSHADFKTSKRRLLQFL*LVRIRA Trigger: AGCTCTAATCCTGACCAGTCAGAGAAACTGCAGGAG...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCGGGGATCCTTGTGGTaGCAGAGTCTGTCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGRGSLW*QSLSLP Trigger: TGGTAAAGACAGACTCTGCCACCACAAGGATCCCCG...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCGGAGCGTTGCACTCTaGGCAGTTAGTGTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGRSVAL*AVSVEL Trigger: CAGTTCAACACTAACTGCCCAGAGTGCAACGCTCCG...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTAAATTGCCTAAGCTGCCCCTGAATTTGTTAGCCTTCCTCCTCAGCCTCTTGCCCTCGATGATCTaGCCCAACTTCTGGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKLPKLPLNLLAFLLSLLPSMI*PNFWLN Trigger: GTTTAGCCAGAAGTTGGGCCAGATCATCGAGGGCAA...GAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGGCAATTTAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| 3UTR CAA 72 bp | GAGTCAGTACTTCACATGCCCAGAGCCAGCAGAAACTaGTATTTCACTTCCCCAGACTTCAAAGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESVLHMPRASRN*YFTSPDFKGPA Trigger: TGCTGGACCTTTGAAGTCTGGGGAAGTGAAATACAAGTTTCTGCTGGCTCTGGGCATGTGAAGTACTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCTCCTGCAGTTTCTCTaGCTGGTCAGGATTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGLLQFL*LVRIRA Trigger: AGCTCTAATCCTGACCAGTCAGAGAAACTGCAGGAG...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR GCA 90 bp | TACTTCACATGCCCAGAGCCAGCAGAAACTTGTATTTCACTTCCCCAGACTTCACTCATCAATTCTCTCTaGGATGGCACCTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFTCPEPAETCISLPQTSLINSL*DGTFHC Trigger: GCAGTGGAAGGTGCCATCGCAGAGAGAATTGATGAG...TGAAGTCTGGGGAAGTGAAATACAAGTTTCTGCTGGCTCTGGGCATGTGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | GCCGACTTTAAAACCTCCAAAAGAAGGTCAAGGAGCACAGTAGGGCTGCAGCTGTTTCTGGGGAGCATGTaGGTTTTCTACAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ADFKTSKRRSRSTVGLQLFLGSM*VFYKAV Trigger: AACAGCTTTGTAGAAAACCCACATGCTCCCCAGAAA...CAGCTGCAGCCCTACTGTGCTCCTTGACCTTCTTTTGGAGGTTTTAAAGTCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGTACAGGAACCCACACATCTTCATACTGCCTGGCTCTAATTTTTGCTAGCAGACGGAGCGTTGCACTCTaGGCAGTTAGTGTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: STGTHTSSYCLALIFASRRSVAL*AVSVEL Trigger: CAGTTCAACACTAACTGCCCAGAGTGCAACGCTCCG...TCTGCTAGCAAAAATTAGAGCCAGGCAGTATGAAGATGTGTGGGTTCCTGTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCATGAAGACGGACTCTCACTGCATGGCCCAAGCTGTCCTCAGTCTCCTTTAAAGTGGGGGATTTaGACAAGCTTCATGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFHEDGLSLHGPSCPQSPLKWGI*TSFMLV Trigger: GACCAACATGAAGCTTGTCCAAATCCCCCACTTTAA...AGGAGACTGAGGACAGCTTGGGCCATGCAGTGAGAGTCCGTCTTCATGAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTAAGCTGCCCCTGAATTTGTTAGCCTTCCTCCTCAGCCTCTCAAGTGGCATAACCTCTTTAAAGTaGGGGATTTGGACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKLPLNLLAFLLSLSSGITSLK*GIWTSF Trigger: GAAGCTTGTCCAAATCCCCCACTTTAAAGAGGTTAT...GCCACTTGAGAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTAAATTGCCTAAGCTGCCCCTGAATTTGTTAGCCTTCCTCCTCAGCCTCTGCAGTTTCTCTGACTaGTCAGGATTAGAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSKLPKLPLNLLAFLLSLCSFSD*SGLELS Trigger: CGACAGCTCTAATCCTGACCAGTCAGAGAAACTGCA...GAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGGCAATTTAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGCTCGACCTTCATCTCTaGATCGTCTTCAGGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AWCFWDSSHADFKTSKRRLDLHL*IVFRCI Trigger: TATGCACCTGAAGACGATCCAGAGATGAAGGTCGAG...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CTCGTCCGTCAGCTGCTAATCTTGGGTGCTTACATTTCTAACTCAAGTGGTAACCTTCTGGCTGAAGGCTaGAATCTCAAAATCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVRQLLILGAYISNSSGNLLAEG*NLKIQL Trigger: GAGCTGGATTTTGAGATTCCAGCCTTCAGCCAGAAG...GTTACCACTTGAGTTAGAAATGTAAGCACCCAAGATTAGCAGCTGACGGACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCATTCATGATAAAGTaGGCCTTCATCTTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWCFWDSSHADFKTSKRRSFMIK*AFILPS Trigger: CGAGGGCAAGATGAAGGCCCACTTTATCATGAATGA...CCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTCTCGACCTTCATCTCTaGATCGTCTTCAGGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGLDLHL*IVFRCI Trigger: TATGCACCTGAAGACGATCCAGAGATGAAGGTCGAG...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAAAGGGGAAGCCATTTaGTTTAGGTCCTTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAWCFWDSSHADFKTSKRKGEAI*FRSFSL Trigger: CAAACTGAAGGACCTAAAGCAAATGGCTTCCCCTTT...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGATTAAACCCAAGGCCTTTTGCACATGGTATGCAGGAGTTCTATAGAACTCTTCTGGCTGAAGGCTaGAATCTCAAAATCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLNPRPFAHGMQEFYRTLLAEG*NLKIQL Trigger: GAGCTGGATTTTGAGATTCCAGCCTTCAGCCAGAAG...AGTTCTATAGAACTCCTGCATACCATGTGCAAAAGGCCTTGGGTTTAATCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAATTAAAGTGGGGGATTTaGACAAGCTTCATGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVSGILLTPTLKPPKELKWGI*TSFMLV Trigger: GACCAACATGAAGCTTGTCCAAATCCCCCACTTTAA...TTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACCTCAAGAAAGATTTGCTTAGGAAACTAAACTGGTTTTTCCTTCCTCATGCTCGGGGATCCTTGTaGTGGCAGAGTCTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHLKKDLLRKLNWFFLPHARGSL*WQSLSL Trigger: TAAAGACAGACTCTGCCACCACAAGGATCCCCGAGC...ATGAGGAAGGAAAAACCAGTTTAGTTTCCTAAGCAAATCTTTCTTGAGGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTTTTCTGGGGAGCATGTaGGTTTTCTACAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGVSGILLTPTLKPPKEGFLGSM*VFYKAV Trigger: AACAGCTTTGTAGAAAACCCACATGCTCCCCAGAAA...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAATAACCTCTTTAAAGTaGGGGATTTGGACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAWCFWDSSHADFKTSKRITSLK*GIWTSF Trigger: GAAGCTTGTCCAAATCCCCCACTTTAAAGAGGTTAT...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR GCA 90 bp | AGTACAGGAACCCACACATCTTCATACTGCCTGGCTCTAATTTTTGCTAGCAGAAAAGGGGAAGCCATTTaGTTTAGGTCCTTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STGTHTSSYCLALIFASRKGEAI*FRSFSL Trigger: CAAACTGAAGGACCTAAAGCAAATGGCTTCCCCTTT...TCTGCTAGCAAAAATTAGAGCCAGGCAGTATGAAGATGTGTGGGTTCCTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACCTCAAGAAAGATTTGCTTAGGAAACTAAACTGGTTTTTCCTTCCTCATGTCGCCCAGTGTGAATaGGTTCTTGGTTACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKKDLLRKLNWFFLPHVAQCE*VLGYQF Trigger: GAACTGGTAACCAAGAACCCATTCACACTGGGCGAC...ATGAGGAAGGAAAAACCAGTTTAGTTTCCTAAGCAAATCTTTCTTGAGGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR TCA 90 bp | CACCTCAAGAAAGATTTGCTTAGGAAACTAAACTGGTTTTTCCTTCCTCATTTCGAGCTCCCTTCTGGCTaGAGGCTGGAATCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLKKDLLRKLNWFFLPHFELPSG*RLESQN Trigger: ATTTTGAGATTCCAGCCTTCAGCCAGAAGGGAGCTC...GAAATGAGGAAGGAAAAACCAGTTTAGTTTCCTAAGCAAATCTTTCTTGAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACATGGTATGCAGGAGTTCTATAGAACTACATCCCCACTCTTTTGAATGTTCATTCATGATAAAGTaGGCCTTCATCTTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHMVCRSSIELHPHSFECSFMIK*AFILPS Trigger: CGAGGGCAAGATGAAGGCCCACTTTATCATGAATGA...ACATTCAAAAGAGTGGGGATGTAGTTCTATAGAACTCCTGCATACCATGTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| 3UTR CAA 72 bp | AAATGCTGCCTCTACAGCAGCCACCTCAAGAAAGATTaGCTTAGGAAACTAAACTGGTTTTTCCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCCLYSSHLKKD*LRKLNWFFLPH Trigger: ATGAGGAAGGAAAAACCAGTTTAGTTTCCTAAGCAAATCTTTCTTGAGGTGGCTGCTGTAGAGGCAGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | CCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAACCCCAGCATCTCAGCTaGCTGTGGGGTTCGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: PPGVSGILLTPTLKPPKEPQHLS*LWGSVI Trigger: TATGACCGAACCCCACAGCAAGCTGAGATGCTGGGG...TTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAAGTGGGCCTTCATCTaGCCCTCGATGATCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAWCFWDSSHADFKTSKRKWAFI*PSMIWP Trigger: GGGCCAGATCATCGAGGGCAAGATGAAGGCCCACTT...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | CTCGTCCGTCAGCTGCTAATCTTGGGTGCTTACATTTCTAACTCAAGTGGTAACAAGTGGGCCTTCATCTaGCCCTCGATGATCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVRQLLILGAYISNSSGNKWAFI*PSMIWP Trigger: GGGCCAGATCATCGAGGGCAAGATGAAGGCCCACTT...GTTACCACTTGAGTTAGAAATGTAAGCACCCAAGATTAGCAGCTGACGGACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | CGAGGATTAAACCCAAGGCCTTTTGCACATGGTATGCAGGAGTTCTATAGAACTCTCTGGTGCTTCTGCTaGGAGCCCCAGCATCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGLNPRPFAHGMQEFYRTLWCFC*EPQHLS Trigger: GCTGAGATGCTGGGGCTCCAAGCAGAAGCACCAGAG...AGTTCTATAGAACTCCTGCATACCATGTGCAAAAGGCCTTGGGTTTAATCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | ACCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGATGGTCAAAGGTGCGTTaGTACCGCTCGACCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TAWCFWDSSHADFKTSKRWSKVR*YRSTFI Trigger: GATGAAGGTCGAGCGGTACAAACGCACCTTTGACCA...TCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
||
| CDS-3UTR CAA 90 bp | GCCTATTGGAGTGAATCAAATGCTGCCTCTACAGCAGCCACCTCAAGAAAGATTTGGTCAAAGGTGCGTTaGTACCGCTCGACCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AYWSESNAASTAATSRKIWSKVR*YRSTFI Trigger: GATGAAGGTCGAGCGGTACAAACGCACCTTTGACCA...AATCTTTCTTGAGGTGGCTGCTGTAGAGGCAGCATTTGATTCACTCCAATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR CAA 90 bp | TTGCACATGGTATGCAGGAGTTCTATAGAACTACATCCCCACTCTTTTGAATGTCCCCAGCATCTCAGCTaGCTGTGGGGTTCGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: LHMVCRSSIELHPHSFECPQHLS*LWGSVI Trigger: TATGACCGAACCCCACAGCAAGCTGAGATGCTGGGG...ACATTCAAAAGAGTGGGGATGTAGTTCTATAGAACTCCTGCATACCATGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTCATGAAGACGGACTCTCACTGCATGGCCCAAGCTGTCCTCAGTCTCCTTTTAAAGTGGGGGATTaGGACAAGCTTCATGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SFHEDGLSLHGPSCPQSPFKVGD*DKLHVG Trigger: ACCAACATGAAGCTTGTCCAAATCCCCCACTTTAAA...AGGAGACTGAGGACAGCTTGGGCCATGCAGTGAGAGTCCGTCTTCATGAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR CAA 90 bp | CCGCCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAACCACAATTCTCACAGTaGGTGGCCATGATGATAACC | + |
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Preference number: 5 (lower is better) Translates to: PPGVSGILLTPTLKPPKEPQFSQ*VAMMIT Trigger: GGTTATCATCATGGCCACCAACTGTGAGAATTGTGG...TTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTCATCCAGCACCGAGGATTAAACCCAAGGCCTTTTGCACATGGTATCTAAAGAAGGGGATCTaGGTGAGCAGAAGTCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: FFFHPAPRIKPKAFCTWYLKKGI*VSRSRV Trigger: GACGCGACTTCTGCTCACCAAGATCCCCTTCTTTAG...ATACCATGTGCAAAAGGCCTTGGGTTTAATCCTCGGTGCTGGATGAAAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156440.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTTTCTGGGATTCTTCTCACGCCGACTTTAAAACCTCCAAAAGAAGGTTTTAAAGTGGGGGATTaGGACAAGCTTCATGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: PGVSGILLTPTLKPPKEGFKVGD*DKLHVG Trigger: ACCAACATGAAGCTTGTCCAAATCCCCCACTTTAAA...ACCTTCTTTTGGAGGTTTTAAAGTCGGCGTGAGAAGAATCCCAGAAACACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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| CDS CAA 72 bp | TTCACCTCATTAGTCCGATGCCCACAATTCTCACAGTaGGTGGCCATGATGATAACCTCTTTAAAGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: FTSLVRCPQFSQ*VAMMITSLKWG Trigger: CCCCCACTTTAAAGAGGTTATCATCATGGCCACCAACTGTGAGAATTGTGGGCATCGGACTAATGAGGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114552.4 ENSMUST00000156440.8 |
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