Pregenerated sensors for ZPLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064310Ensembl transcript IDs: ENSMUST00000036412.4, ENSMUST00000143914.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATaGTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTG | + |
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Preference number: 1 (lower is better) Translates to: IKRILACWGTRMGAS*LYGADNVCCSRNHL Trigger: CAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR TCA 90 bp | TGCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTaGATTAGCAACACCCTTCGCACAGTGCCCTTGACTACATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLYGADNVCCSRNHL*ISNTLRTVPLTTWK Trigger: CTTCCATGTAGTCAAGGGCACTGTGCGAAGGGTGTTGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR GCA 90 bp | TACTCTGTATTTCCTCTTTGTTCTAGGATAAAAAGAATTCTGGCCTaGTGGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: YSVFPLCSRIKRILA*WGTRMGASCLYGAD Trigger: GTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCTAGAACAAAGAGGAAATACAGAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR CCA 90 bp | TCTGTATTTCCTCTTTGTTCTAGGATAAAAAGAATTCTGGCCTGCTaGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAAT | + |
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Preference number: 1 (lower is better) Translates to: SVFPLCSRIKRILAC*GTRMGASCLYGADN Trigger: ATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCTAGAACAAAGAGGAAATACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR TCA 90 bp | TGTTTCCTTTTGAAACAAATGTCATCAGGATTAAAAATCAACCCATaGCACAGTAGGTCAGTAGAAATAGTAGGTAACTCACAAATGTCC | + |
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Preference number: 1 (lower is better) Translates to: CFLLKQMSSGLKINP*HSRSVEIVGNSQMS Trigger: GGACATTTGTGAGTTACCTACTATTTCTACTGACCTACTGTGTCATGGGTTGATTTTTAATCCTGATGACATTTGTTTCAAAAGGAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTACCATATGTACCAGGATaGAGCTTCACAGCCATTGCT | + |
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Preference number: 2 (lower is better) Translates to: RIKRILACWGTRMGASCLPYVPG*SFTAIA Trigger: AGCAATGGCTGTGAAGCTTCATCCTGGTACATATGG...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAACACAGAATGGTCAGTaGCACCCTCCTTCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: AYMVLTMSAAHVITCELATQNGQ*HPPSGA Trigger: TGCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTTTAAAACCATTGCATTaGGCTTTGCTGCTTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: GGPEWEHHAYMVLTMSAALKPLH*ALLLTE Trigger: TTCTGTAAGCAGCAAAGCCCAATGCAATGGTTTTAA...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCACACAGTCACACAGAATaGTCAGTGACACCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AYMVLTMSAAHVITCELAHSHTE*SVTPSF Trigger: GAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTG...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATTAAAAATCAACCCATaGCACAGTAGGTCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: RIKRILACWGTRMGASCLLKINP*HSRSVE Trigger: TTCTACTGACCTACTGTGTCATGGGTTGATTTTTAA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR TCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTACACAGAATGGTCAGTaGCACCCTCCTTCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSFISLPLIKSLEQRNIFTQNGQ*HPPSGA Trigger: TGCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGT...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCATGCATTGGGCTTTGCTaGTTACAGAAAAATGGAACA | + |
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Preference number: 2 (lower is better) Translates to: AYMVLTMSAAHVITCELACIGLC*LQKNGT Trigger: TGTTCCATTTTTCTGTAAGCAGCAAAGCCCAATGCA...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCATTAAAAATCAACCCATaGCACAGTAGGTCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: AYMVLTMSAAHVITCELALKINP*HSRSVE Trigger: TTCTACTGACCTACTGTGTCATGGGTTGATTTTTAA...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR GCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTCATTGCATTGGGCTTTaGTGCTTACAGAAAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: GSFISLPLIKSLEQRNIFHCIGL*CLQKNG Trigger: TCCATTTTTCTGTAAGCAGCAAAGCCCAATGCAATG...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR GCA 72 bp | ATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATaGTTATATGGTGCTGACAATGTCTGCTGCTCACGT | + |
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Preference number: 3 (lower is better) Translates to: ILACWGTRMGAS*LYGADNVCCSR Trigger: ACGTGAGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR CCA 72 bp | GAACTCAGATGGACTGCTGACCACAGTCACACAGAATaGTCAGTGACACCCTCCTTCTGGAGCAGGACCAGT | + |
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Preference number: 3 (lower is better) Translates to: ELRWTADHSHTE*SVTPSFWSRTS Trigger: ACTGGTCCTGCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCATCTGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTACAAGGGTGGCTGTCATaGAACTCAGATGGACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RIKRILACWGTRMGASCLQGWLS*NSDGLL Trigger: CAGCAGTCCATCTGAGTTCAATGACAGCCACCCTTG...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAGATAAGAAAGTGGGGTaGGCCACTTACATAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: RIKRILACWGTRMGASCLDKKVG*ATYIGG Trigger: GCCACCTATGTAAGTGGCCAACCCCACTTTCTTATC...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCCATTGCATTGGGCTTaGCTGCTTACAGAAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAPLHWA*LLTEKW Trigger: CCATTTTTCTGTAAGCAGCAAAGCCCAATGCAATGG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGAAGCTTCACAGCCATaGCTAGCCAAAGGAATAATT | + |
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Preference number: 3 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAEASQP*LAKGII Trigger: AATTATTCCTTTGGCTAGCAATGGCTGTGAAGCTTC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTACCATTGCATTGGGCTTaGCTGCTTACAGAAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: RIKRILACWGTRMGASCLPLHWA*LLTEKW Trigger: CCATTTTTCTGTAAGCAGCAAAGCCCAATGCAATGG...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTTTTAAAACCATTGCATaGGGCTTTGCTGCTTACAGA | + |
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Preference number: 3 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAFKTIA*GFAAYR Trigger: TCTGTAAGCAGCAAAGCCCAATGCAATGGTTTTAAA...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAGAAGCTTCACAGCCATaGCTAGCCAAAGGAATAATT | + |
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Preference number: 3 (lower is better) Translates to: RIKRILACWGTRMGASCLEASQP*LAKGII Trigger: AATTATTCCTTTGGCTAGCAATGGCTGTGAAGCTTC...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR CCA 72 bp | CCTCTTTGTTCTAGGATAAAAAGAATTCTGGCCTGCTaGGGGACCCGAATGGGAGCATCATGCTTATATGGT | + |
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Preference number: 3 (lower is better) Translates to: PLCSRIKRILAC*GTRMGASCLYG Trigger: ACCATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCTAGAACAAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATTTAAAACCATTGCATaGGGCTTTGCTGCTTACAGA | + |
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Preference number: 3 (lower is better) Translates to: RIKRILACWGTRMGASCLFKTIA*GFAAYR Trigger: TCTGTAAGCAGCAAAGCCCAATGCAATGGTTTTAAA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR GCA 72 bp | TTTCCTCTTTGTTCTAGGATAAAAAGAATTCTGGCCTaGTGGGGGACCCGAATGGGAGCATCATGCTTATAT | + |
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Preference number: 3 (lower is better) Translates to: FPLCSRIKRILA*WGTRMGASCLY Trigger: ATATAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCTAGAACAAAGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| 3UTR-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTCAAGGGTGGCTGTCATaGAACTCAGATGGACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GSFISLPLIKSLEQRNIFQGWLS*NSDGLL Trigger: CAGCAGTCCATCTGAGTTCAATGACAGCCACCCTTG...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTTTTCCAGAAGTGCTCTaGGGGGCCCACGTTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAFPEVL*GAHVVQ Trigger: CTGGACAACGTGGGCCCCGCAGAGCACTTCTGGAAA...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCCACAGAAATAGCAGCTaGGGACGAAGCAAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSHRNSS*GRSKLG Trigger: ACCCAGCTTGCTTCGTCCTCAGCTGCTATTTCTGTG...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCTCTGCAGAGTTTCGTaGGGCAGTGCAGGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAALCRVS*GSAGTQ Trigger: CTGTGTTCCTGCACTGCCTCACGAAACTCTGCAGAG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCGAAAACCGGCCTCGCTaGCTTCTGCCATTTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSENRPR*LLPFSM Trigger: CATCGAAAATGGCAGAAGCCAGCGAGGCCGGTTTTC...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCCACAGTTGTAACTGTTaGACTGAGCAGACCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSHSCNC*TEQTLD Trigger: GTCCAGGGTCTGCTCAGTTCAACAGTTACAACTGTG...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCCTCCACAGTAGACACTaGTGTCTCTTTCCGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSLHSRH*CLFPQE Trigger: TTCCTGCGGAAAGAGACATCAGTGTCTACTGTGGAG...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCACAGAAATAGCAGCTaGGGACGAAGCAAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAHRNSS*GRSKLG Trigger: ACCCAGCTTGCTTCGTCCTCAGCTGCTATTTCTGTG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCCAGCGAACCAAGCTGTaGATTGTTGGTTGGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSQRTKL*IVGWSL Trigger: GAGACTCCAACCAACAATTCACAGCTTGGTTCGCTG...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTATATCAGAGAGCTGGTaGCGGCATTCAGCTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAISESW*RHSAER Trigger: CCTTTCAGCTGAATGCCGTCACCAGCTCTCTGATAT...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCAAGATAGCTGATAACTaGTGGAGGGTCCGGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSKIADN*WRVRSI Trigger: GATACTCCGGACCCTCCAGCAGTTATCAGCTATCTT...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCCAAGCTGTGAATTGTTaGTTGGAGTCTCATCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSQAVNC*LESHRS Trigger: GGAGCGATGAGACTCCAACCAACAATTCACAGCTTG...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCAGAATGACCATTCCTaGTATCAGAGAGCTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAQNDHS*YQRAGD Trigger: GTCACCAGCTCTCTGATATCAGGAATGGTCATTCTG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTACAGGACTCCCAGAATaGCCATTCCTGATATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAATGLPE*PFLISE Trigger: CTCTGATATCAGGAATGGTCATTCTGGGAGTCCTGT...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTAAGATAGCTGATAACTaGTGGAGGGTCCGGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAKIADN*WRVRSI Trigger: GATACTCCGGACCCTCCAGCAGTTATCAGCTATCTT...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCATCTGCTGTGGAGGTTaGCATCACAGTTGTAACTGT | + |
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Preference number: 4 (lower is better) Translates to: WTADHSHTEWSVTPSFWSICCGG*HHSCNC Trigger: ACAGTTACAACTGTGATGCCAACCTCCACAGCAGAT...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAATGAAGCCCCTGCAGTaGGAATCCCCATGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLMKPLQ*ESPCLP Trigger: TGGAAGACATGGGGATTCCCACTGCAGGGGCTTCAT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCAAGCTGTGAATTGTTaGTTGGAGTCTCATCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAQAVNC*LESHRS Trigger: GGAGCGATGAGACTCCAACCAACAATTCACAGCTTG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTTGCCAGATCTGTTTCTaGATATCCCGAGAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAACQICF*ISREKD Trigger: GTCCTTTTCTCGGGATATTCAGAAACAGATCTGGCA...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTTTCTGCCATTTTCGATaGCAGTGGTCTGAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAFCHFR*QWSEDL Trigger: AAGATCCTCAGACCACTGTCATCGAAAATGGCAGAA...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAATATCAGAGAGCTGGTaGCGGCATTCAGCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLISESW*RHSAER Trigger: CCTTTCAGCTGAATGCCGTCACCAGCTCTCTGATAT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAGCAGGAAATCTGCTGTaGAGGTTGGCATCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLAGNLL*RLASQL Trigger: CAACTGTGATGCCAACCTCCACAGCAGATTTCCTGC...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTATAGCTGATAACTGCTaGAGGGTCCGGAGTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAIADNC*RVRSIN Trigger: ATTGATACTCCGGACCCTCCAGCAGTTATCAGCTAT...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGAGGACGAAGCAAGCTaGGTGTTATTAACCAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAEDEAS*VLLTRY Trigger: ATACCTGGTTAATAACACCCAGCTTGCTTCGTCCTC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCCGAGTATCATCATTTaGATTCCCAGATGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAPSIII*IPRWGC Trigger: ACAACCCCATCTGGGAATCCAAATGATGATACTCGG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATCGATGACAGTGGTCTaGGGATCTTTGTCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLSMTVV*GSLSQL Trigger: TAGCTGTGACAAAGATCCTCAGACCACTGTCATCGA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATGCCACAAATTGGCATaGGAAGAGGACAGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLCHKLA*EEDSHQ Trigger: CTGATGACTGTCCTCTTCTCATGCCAATTTGTGGCA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAGTGACGGCATTCAGCTaGAAGGGAGGCACACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAVTAFS*KGGTLS Trigger: GCTGAGTGTGCCTCCCTTTCAGCTGAATGCCGTCAC...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATGCCAGATCTGTTTCTaGATATCCCGAGAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLCQICF*ISREKD Trigger: GTCCTTTTCTCGGGATATTCAGAAACAGATCTGGCA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATTCTGCCATTTTCGATaGCAGTGGTCTGAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLFCHFR*QWSEDL Trigger: AAGATCCTCAGACCACTGTCATCGAAAATGGCAGAA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAATCTGCTGTGGAGGTTaGCATCACAGTTGTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLICCGG*HHSCNC Trigger: ACAGTTACAACTGTGATGCCAACCTCCACAGCAGAT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGATGAAAATGACCACTaGTGGAAAGGTGTTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAADENDH*WKGVVI Trigger: AATAACAACACCTTTCCAGCAGTGGTCATTTTCATC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR GCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTATCCAGATTAGTAGCTTaGACAGCTGCAAACACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLSRLVA*TAANTL Trigger: CAAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGA...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGAAAATGACCACTGCTaGAAAGGTGTTGTTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAENDHC*KGVVID Trigger: ATCAATAACAACACCTTTCCAGCAGTGGTCATTTTC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCACTCCACAGTAGACACTaGTGTCTCTTTCCGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELALHSRH*CLFPQE Trigger: TTCCTGCGGAAAGAGACATCAGTGTCTACTGTGGAG...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAGCAAGTTCAAAGTACTaGCAAATGTCCCATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLASSKY*QMSHCS Trigger: AGAACAATGGGACATTTGTCAGTACTTTGAACTTGC...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAAGTTTCGTGAGGCAGTaGAGGAACACAGTGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELASFVRQ*RNTVDI Trigger: GATGTCCACTGTGTTCCTGCACTGCCTCACGAAACT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAAGTGCAGGAACACAGTaGACATCTTTTGATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIKRILACWGTRMGASCLSAGTQ*TSFDSC Trigger: ACAAGAATCAAAAGATGTCCACTGTGTTCCTGCACT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGTGACGGCATTCAGCTaGAAGGGAGGCACACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFVTAFS*KGGTLS Trigger: GCTGAGTGTGCCTCCCTTTCAGCTGAATGCCGTCAC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAATAGCTGATAACTGCTaGAGGGTCCGGAGTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAIADNC*RVRSIN Trigger: ATTGATACTCCGGACCCTCCAGCAGTTATCAGCTAT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAGAGGACGAAGCAAGCTaGGTGTTATTAACCAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAEDEAS*VLLTRY Trigger: ATACCTGGTTAATAACACCCAGCTTGCTTCGTCCTC...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCACCGAGTATCATCATTTaGATTCCCAGATGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAPSIII*IPRWGC Trigger: ACAACCCCATCTGGGAATCCAAATGATGATACTCGG...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR GCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCATCCAGATTAGTAGCTTaGACAGCTGCAAACACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELASRLVA*TAANTL Trigger: CAAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGA...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGAAAACCGGCCTCGCTaGCTTCTGCCATTTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFENRPR*LLPFSM Trigger: CATCGAAAATGGCAGAAGCCAGCGAGGCCGGTTTTC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGCAGGAAATCTGCTGTaGAGGTTGGCATCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFAGNLL*RLASQL Trigger: CAACTGTGATGCCAACCTCCACAGCAGATTTCCTGC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCACAGCTGCAAACACTTTaGTTTTCAAGGGTAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAQLQTL*FSRVIL Trigger: TAGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTG...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAATTTGGATTCCCAGATaGGGTTGTGTAGCAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: AYMVLTMSAAHVITCELAIWIPR*GCVAII Trigger: GATTATTGCTACACAACCCCATCTGGGAATCCAAAT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTCAGAATGACCATTCCTaGTATCAGAGAGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFQNDHS*YQRAGD Trigger: GTCACCAGCTCTCTGATATCAGGAATGGTCATTCTG...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTACAGGACTCCCAGAATaGCCATTCCTGATATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFTGLPE*PFLISE Trigger: CTCTGATATCAGGAATGGTCATTCTGGGAGTCCTGT...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR TCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGCAAGTTCAAAGTACTaGCAAATGTCCCATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFASSKY*QMSHCS Trigger: AGAACAATGGGACATTTGTCAGTACTTTGAACTTGC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTCAGCTGCAAACACTTTaGTTTTCAAGGGTAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFQLQTL*FSRVIL Trigger: TAGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTG...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTAGTGCAGGAACACAGTaGACATCTTTTGATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFSAGTQ*TSFDSC Trigger: ACAAGAATCAAAAGATGTCCACTGTGTTCCTGCACT...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CCA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGAAAATGACCACTGCTaGAAAGGTGTTGTTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSFISLPLIKSLEQRNIFENDHC*KGVVID Trigger: ATCAATAACAACACCTTTCCAGCAGTGGTCATTTTC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS TCA 90 bp | GACGGCATTCAGCTGAAAGGGAGGCACACTCAGCGAACCAAGCTGTaGATTGTTGGTTGGAGTCTCATCGCTCCGGGTGATGATGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DGIQLKGRHTQRTKL*IVGWSLIAPGDDGS Trigger: GGACCCATCATCACCCGGAGCGATGAGACTCCAACCAACAATTCACAGCTTGGTTCGCTGAGTGTGCCTCCCTTTCAGCTGAATGCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR CAA 90 bp | TGGACTGCTGACCACAGTCACACAGAATGGTCAGTGACACCCTCCTTCTGGAGCGGAAAGGTGTTGTTATaGATGAAGCCCCTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WTADHSHTEWSVTPSFWSGKVLL*MKPLQW Trigger: CCACTGCAGGGGCTTCATCAATAACAACACCTTTCC...GCTCCAGAAGGAGGGTGTCACTGACCATTCTGTGTGACTGTGGTCAGCAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS TCA 90 bp | ACCGCATTTCCAGAAGTGCTCTGCGGGGCCCACGTTGTCCAGCTCTaGGCATCTCTCCTTTTTCTGTTGCCACAAATTGGCATGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TAFPEVLCGAHVVQL*ASLLFLLPQIGMRR Trigger: TCTTCTCATGCCAATTTGTGGCAACAGAAAAAGGAGAGATGCTCAGAGCTGGACAACGTGGGCCCCGCAGAGCACTTCTGGAAATGCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGGAAAGGTGTTGTTATaGATGAAGCCCCTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAGKVLL*MKPLQW Trigger: CCACTGCAGGGGCTTCATCAATAACAACACCTTTCC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTCCAAGCTGTGAATTGTaGGTTGGAGTCTCATCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAPSCEL*VGVSSL Trigger: GAGCGATGAGACTCCAACCAACAATTCACAGCTTGG...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGACCCGAATGGGAGCATCATGCTTATATGGTGCTGACAATGTCTGCTGCTGAACCAAGCTGTGAATaGTTGGTTGGAGTCTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GGPEWEHHAYMVLTMSAAEPSCE*LVGVSS Trigger: CGATGAGACTCCAACCAACAATTCACAGCTTGGTTC...AGCAGCAGACATTGTCAGCACCATATAAGCATGATGCTCCCATTCGGGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS TCA 90 bp | GAAAACCGGCCTCGCTGGCTTCTGCCATTTTCGATGACAGTGGTCTaGGGATCTTTGTCACAGCTAAGGAAGAGATCATACCGAGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: ENRPRWLLPFSMTVV*GSLSQLRKRSYRVS Trigger: TGATACTCGGTATGATCTCTTCCTTAGCTGTGACAAAGATCCTCAGACCACTGTCATCGAAAATGGCAGAAGCCAGCGAGGCCGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
||
| CDS TCA 90 bp | AGAATGACCATTCCTGATATCAGAGAGCTGGTGACGGCATTCAGCTaGAAGGGAGGCACACTCAGCGAACCAAGCTGTGAATTGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RMTIPDIRELVTAFS*KGGTLSEPSCELLV Trigger: AACCAACAATTCACAGCTTGGTTCGCTGAGTGTGCCTCCCTTTCAGCTGAATGCCGTCACCAGCTCTCTGATATCAGGAATGGTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CCA 90 bp | ACAGCCCTCCAAGGTGCTGAGATTAATGATGAAAATGACCACTGCTaGAAAGGTGTTGTTATTGATGAAGCCCCTGCAGTGGGAATCCCC | + |
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Preference number: 5 (lower is better) Translates to: TALQGAEINDENDHC*KGVVIDEAPAVGIP Trigger: GGGGATTCCCACTGCAGGGGCTTCATCAATAACAACACCTTTCCAGCAGTGGTCATTTTCATCATTAATCTCAGCACCTTGGAGGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAACTGCTGGAAAGGTGTaGTTATTGATGAAGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: RIKRILACWGTRMGASCLTAGKV*LLMKPL Trigger: CAGGGGCTTCATCAATAACAACACCTTTCCAGCAGT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS GCA 90 bp | TCCACAGCCCTCCAAGGTGCTGAGATTAATGATGAAAATGACCACTaGTGGAAAGGTGTTGTTATTGATGAAGCCCCTGCAGTGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: STALQGAEINDENDH*WKGVVIDEAPAVGI Trigger: GATTCCCACTGCAGGGGCTTCATCAATAACAACACCTTTCCAGCAGTGGTCATTTTCATCATTAATCTCAGCACCTTGGAGGGCTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CCA 90 bp | ATGACCACTGCTGGAAAGGTGTTGTTATTGATGAAGCCCCTGCAGTaGGAATCCCCATGTCTTCCATTCAGTGCCAGATCTGTTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: MTTAGKVLLLMKPLQ*ESPCLPFSARSVSE Trigger: TTCAGAAACAGATCTGGCACTGAATGGAAGACATGGGGATTCCCACTGCAGGGGCTTCATCAATAACAACACCTTTCCAGCAGTGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAGCTGTGAATTGTTGGTaGGAGTCTCATCGCTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AYMVLTMSAAHVITCELAAVNCW*ESHRSG Trigger: CCCGGAGCGATGAGACTCCAACCAACAATTCACAGC...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAACAGCTGCAAACACTTaGGTTTTCAAGGGTAATCCT | + |
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Preference number: 5 (lower is better) Translates to: RIKRILACWGTRMGASCLTAANT*VFKGNP Trigger: AGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTGT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAATCCAGATTAGTAGCTaGCACAGCTGCAAACACTTT | + |
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Preference number: 5 (lower is better) Translates to: RIKRILACWGTRMGASCLIQISS*HSCKHF Trigger: AAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGAT...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | AGGATAAAAAGAATTCTGGCCTGCTGGGGGACCCGAATGGGAGCATCATGCTTAGATTCCCAGATGGGGTaGTGTAGCAATAATCCATTA | + |
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Preference number: 5 (lower is better) Translates to: RIKRILACWGTRMGASCLDSQMG*CSNNPL Trigger: TAATGGATTATTGCTACACAACCCCATCTGGGAATC...TAAGCATGATGCTCCCATTCGGGTCCCCCAGCAGGCCAGAATTCTTTTTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCACCAAGCTGTGAATTGTaGGTTGGAGTCTCATCGCTC | + |
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Preference number: 5 (lower is better) Translates to: AYMVLTMSAAHVITCELAPSCEL*VGVSSL Trigger: GAGCGATGAGACTCCAACCAACAATTCACAGCTTGG...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAACTGCTGGAAAGGTGTaGTTATTGATGAAGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: AYMVLTMSAAHVITCELATAGKV*LLMKPL Trigger: CAGGGGCTTCATCAATAACAACACCTTTCCAGCAGT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCAACAGCTGCAAACACTTaGGTTTTCAAGGGTAATCCT | + |
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Preference number: 5 (lower is better) Translates to: AYMVLTMSAAHVITCELATAANT*VFKGNP Trigger: AGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTGT...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GCTTATATGGTGCTGACAATGTCTGCTGCTCACGTAATCACTTGTGAATTAGCATCTCTCCTTTTTCTGTaGCCACAAATTGGCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: AYMVLTMSAAHVITCELASLLFL*PQIGMR Trigger: TCTCATGCCAATTTGTGGCAACAGAAAAAGGAGAGA...TGCTAATTCACAAGTGATTACGTGAGCAGCAGACATTGTCAGCACCATATAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGAACCAAGCTGTGAATaGTTGGTTGGAGTCTCATCG | + |
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Preference number: 5 (lower is better) Translates to: GSFISLPLIKSLEQRNIFEPSCE*LVGVSS Trigger: CGATGAGACTCCAACCAACAATTCACAGCTTGGTTC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CCA 90 bp | ACAACTAAATTTGTAAAGAAGCCCAGGAAGATAGCTGATAACTGCTaGAGGGTCCGGAGTATCAATATATCCAGAAATATTTCCTATCTG | + |
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Preference number: 5 (lower is better) Translates to: TTKFVKKPRKIADNC*RVRSINISRNISYL Trigger: CAGATAGGAAATATTTCTGGATATATTGATACTCCGGACCCTCCAGCAGTTATCAGCTATCTTCCTGGGCTTCTTTACAAATTTAGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTATCCAGATTAGTAGCTaGCACAGCTGCAAACACTTT | + |
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Preference number: 5 (lower is better) Translates to: GSFISLPLIKSLEQRNIFIQISS*HSCKHF Trigger: AAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGAT...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTGATTCCCAGATGGGGTaGTGTAGCAATAATCCATTA | + |
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Preference number: 5 (lower is better) Translates to: GSFISLPLIKSLEQRNIFDSQMG*CSNNPL Trigger: TAATGGATTATTGCTACACAACCCCATCTGGGAATC...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTTCTCTCCTTTTTCTGTaGCCACAAATTGGCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: GSFISLPLIKSLEQRNIFSLLFL*PQIGMR Trigger: TCTCATGCCAATTTGTGGCAACAGAAAAAGGAGAGA...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS-3UTR CAA 90 bp | GGATCATTCATTTCCCTACCTCTCATAAAAAGTCTTGAACAAAGGAACATCTTTCTGACAAATGTCCCATaGTTCTCTCTCACAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: GSFISLPLIKSLEQRNIFLTNVP*FSLTEI Trigger: TATTTCTGTGAGAGAGAACAATGGGACATTTGTCAG...AAAGATGTTCCTTTGTTCAAGACTTTTTATGAGAGGTAGGGAAATGAATGATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 72 bp | GGACCGCATTTCCAGAAGTGCTCTGCGGGGCCCACGTaGTCCAGCTCTGAGCATCTCTCCTTTTTCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GPHFQKCSAGPT*SSSEHLSFFCC Trigger: GCAACAGAAAAAGGAGAGATGCTCAGAGCTGGACAACGTGGGCCCCGCAGAGCACTTCTGGAAATGCGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 90 bp | CTGCAGACAGGACCGCATTTCCAGAAGTGCTCTGCGGGGCCCACGTaGTCCAGCTCTGAGCATCTCTCCTTTTTCTGTTGCCACAAATTG | + |
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Preference number: 6 (lower is better) Translates to: LQTGPHFQKCSAGPT*SSSEHLSFFCCHKL Trigger: CAATTTGTGGCAACAGAAAAAGGAGAGATGCTCAGAGCTGGACAACGTGGGCCCCGCAGAGCACTTCTGGAAATGCGGTCCTGTCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS TCA 72 bp | CAGCTGAAAGGGAGGCACACTCAGCGAACCAAGCTGTaGATTGTTGGTTGGAGTCTCATCGCTCCGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: QLKGRHTQRTKL*IVGWSLIAPGD Trigger: ATCACCCGGAGCGATGAGACTCCAACCAACAATTCACAGCTTGGTTCGCTGAGTGTGCCTCCCTTTCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 72 bp | AAGGGAGGCACACTCAGCGAACCAAGCTGTGAATTGTaGGTTGGAGTCTCATCGCTCCGGGTGATGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: KGGTLSEPSCEL*VGVSSLRVMMG Trigger: ACCCATCATCACCCGGAGCGATGAGACTCCAACCAACAATTCACAGCTTGGTTCGCTGAGTGTGCCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS TCA 72 bp | ATTCCTGATATCAGAGAGCTGGTGACGGCATTCAGCTaGAAGGGAGGCACACTCAGCGAACCAAGCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: IPDIRELVTAFS*KGGTLSEPSCE Trigger: TTCACAGCTTGGTTCGCTGAGTGTGCCTCCCTTTCAGCTGAATGCCGTCACCAGCTCTCTGATATCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CCA 72 bp | GCTGGAAAGGTGTTGTTATTGATGAAGCCCCTGCAGTaGGAATCCCCATGTCTTCCATTCAGTGCCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: AGKVLLLMKPLQ*ESPCLPFSARS Trigger: AGATCTGGCACTGAATGGAAGACATGGGGATTCCCACTGCAGGGGCTTCATCAATAACAACACCTTTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS TCA 72 bp | CCTCGCTGGCTTCTGCCATTTTCGATGACAGTGGTCTaGGGATCTTTGTCACAGCTAAGGAAGAGATCATAC | + |
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Preference number: 6 (lower is better) Translates to: PRWLLPFSMTVV*GSLSQLRKRSY Trigger: GTATGATCTCTTCCTTAGCTGTGACAAAGATCCTCAGACCACTGTCATCGAAAATGGCAGAAGCCAGCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS TCA 72 bp | GAGAGAGAAACACAGGACTCCCAGAATGACCATTCCTaGTATCAGAGAGCTGGTGACGGCATTCAGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ERETQDSQNDHS*YQRAGDGIQLK Trigger: TTTCAGCTGAATGCCGTCACCAGCTCTCTGATATCAGGAATGGTCATTCTGGGAGTCCTGTGTTTCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS GCA 72 bp | CTCCAAGGTGCTGAGATTAATGATGAAAATGACCACTaGTGGAAAGGTGTTGTTATTGATGAAGCCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LQGAEINDENDH*WKGVVIDEAPA Trigger: TGCAGGGGCTTCATCAATAACAACACCTTTCCAGCAGTGGTCATTTTCATCATTAATCTCAGCACCTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 90 bp | TTCCATCTGCCATCCAGATTAGTAGCTTGCACAGCTGCAAACACTTaGGTTTTCAAGGGTAATCCTATACTCGGGATAATTAATTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FHLPSRLVACTAANT*VFKGNPILGIINCS Trigger: GGAGCAATTAATTATCCCGAGTATAGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGATGGCAGATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CCA 72 bp | ACAGCTAAGGAAGAGATCATACCGAGTATCATCATTTaGATTCCCAGATGGGGTTGTGTAGCAATAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: TAKEEIIPSIII*IPRWGCVAIIH Trigger: ATGGATTATTGCTACACAACCCCATCTGGGAATCCAAATGATGATACTCGGTATGATCTCTTCCTTAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 72 bp | CCATCCAGATTAGTAGCTTGCACAGCTGCAAACACTTaGGTTTTCAAGGGTAATCCTATACTCGGGATAATT | + |
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Preference number: 6 (lower is better) Translates to: PSRLVACTAANT*VFKGNPILGII Trigger: AATTATCCCGAGTATAGGATTACCCTTGAAAACCAAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 90 bp | GGAAGAGATCATACCGAGTATCATCATTTGGATTCCCAGATGGGGTaGTGTAGCAATAATCCATTAAAACATTCCATCTGCCATCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GRDHTEYHHLDSQMG*CSNNPLKHSICHPD Trigger: ATCTGGATGGCAGATGGAATGTTTTAATGGATTATTGCTACACAACCCCATCTGGGAATCCAAATGATGATACTCGGTATGATCTCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS GCA 72 bp | AAATTTGTAAAGAAGCCCAGGAAGATAGCTGATAACTaGTGGAGGGTCCGGAGTATCAATATATCCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: KFVKKPRKIADN*WRVRSINISRN Trigger: ATTTCTGGATATATTGATACTCCGGACCCTCCAGCAGTTATCAGCTATCTTCCTGGGCTTCTTTACAAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS CAA 72 bp | CATACCGAGTATCATCATTTGGATTCCCAGATGGGGTaGTGTAGCAATAATCCATTAAAACATTCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HTEYHHLDSQMG*CSNNPLKHSIC Trigger: GCAGATGGAATGTTTTAATGGATTATTGCTACACAACCCCATCTGGGAATCCAAATGATGATACTCGGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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| CDS GCA 72 bp | ATTAAAACATTCCATCTGCCATCCAGATTAGTAGCTTaGACAGCTGCAAACACTTTGGTTTTCAAGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: IKTFHLPSRLVA*TAANTLVFKGN Trigger: ATTACCCTTGAAAACCAAAGTGTTTGCAGCTGTGCAAGCTACTAATCTGGATGGCAGATGGAATGTTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036412.4 ENSMUST00000143914.8 |
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