Pregenerated sensors for ZPBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017195Ensembl transcript IDs: ENSMUST00000017339.12, ENSMUST00000081033.13, ENSMUST00000107509.8, ENSMUST00000107511.8, ENSMUST00000107513.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTaGTGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LPLLILLSRGTYDAL*CQQILAPTFKGKQP Trigger: TGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR GCA 90 bp | GTAGCACTTGAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATaGCTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VALELPLVHRRHRDK*LLRSNFSGPCQLLS Trigger: AGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTCAAGTGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTAAGGGCAAACAGCCATaGTTCCACCTCTGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FPRYLRCSLMPADLGPHLKGKQP*FHLCSW Trigger: CCAAGAGCAGAGGTGGAAGCATGGCTGTTTGCCCTT...AAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAAAGGGCAAACAGCCATaGTTCCACCTCTGCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ALTDLTFPRYLRCSLMPAKGKQP*FHLCSW Trigger: CCAAGAGCAGAGGTGGAAGCATGGCTGTTTGCCCTT...TGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGACCTACGATGCTCTCTaGTGCCAGCAGATCTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RSNFSGPCQLLSAVVSRVTYDAL*CQQILA Trigger: GGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGT...CACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTAAGGGCAAACAGCCATaGTTCCACCTCTGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TSKALPLLILLSRGTYDAKGKQP*FHLCSW Trigger: CCAAGAGCAGAGGTGGAAGCATGGCTGTTTGCCCTT...AGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR CAA 90 bp | CAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTaGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QLLSAVVSRVRTSKA*PLLILLSRGTYDAL Trigger: GAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGAAGGGCAAACAGCCATaGTTCCACCTCTGCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RSNFSGPCQLLSAVVSRVKGKQP*FHLCSW Trigger: CCAAGAGCAGAGGTGGAAGCATGGCTGTTTGCCCTT...CACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAAGGGCAAACAGCCATaGTTCCACCTCTGCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSKGKQP*FHLCSW Trigger: CCAAGAGCAGAGGTGGAAGCATGGCTGTTTGCCCTT...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | GAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACCTGTTGTTTCTAGAGTaGGGACTTCCAAAGCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: ELPLVHRRHRDKCLLRSNLLFLE*GLPKLC Trigger: GCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAG...GTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR-3UTR GCA 90 bp | TACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTCTCTGGTCCATCTGTTGTTTCTAGAGTaGGGACTTCCAAAGCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: YTGGTEINAFSEATSLVHLLFLE*GLPKLC Trigger: GCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAG...ATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR CCA 72 bp | GAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTaGCCCCCACCTTCAAGGGCAAACAGCCATGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: EVPTMLSDASRS*PPPSRANSHAS Trigger: GGAAGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR GCA 72 bp | GAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATaGCTTCTCAGAAGCAACTTCTCTGGTCCATGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELPLVHRRHRDK*LLRSNFSGPCQ Trigger: CTGACATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR TCA 72 bp | TTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTaGTCTTACTTTCCCGAGGTACCTACGATGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLECGLPKLCPY*SYFPEVPTMLS Trigger: AGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | AGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGTTGCGATCCAACTCCTaGGAGAGACCAGAGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RYLRCSLMPADLGPHLQGLRSNS*ERPEHR Trigger: GCGGTGCTCTGGTCTCTCGCAGGAGTTGGATCGCAA...CCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
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| CDS-3UTR TCA 90 bp | CCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAACAGAAACACAGATCTaGCAGGTGACATCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: PRYLRCSLMPADLGPHLQTETQI*QVTSTS Trigger: CGATGTGGATGTCACCTGTCAGATCTGTGTTTCTGT...TTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | CTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTGCGAAAGGATTCACTTaGAAGGCTATGAACAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSDASRSWPPPSRANSHAAKGFT*KAMNSS Trigger: TGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGC...AGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTATATATTTTTACTCCTaGGAGAGACCAGAGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSDASRSWPPPSRANSHAIYFYS*ERPEHR Trigger: GCGGTGCTCTGGTCTCTCGCAGGAGTAAAAATATAT...AGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107513.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCAGGAAGTCCCTCTCTaGAAGTTTAACAAAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFPRYLRCSLMPADLGPHQEVPL*KFNKMA Trigger: TGCCATTTTGTTAAACTTCCAGAGAGGGACTTCCTG...GTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CCA 90 bp | TCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTTCCCAGGAAGTCCCTCTCTaGAAGTTTAACAAAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: SDASRSWPPPSRANSHASQEVPL*KFNKMA Trigger: TGCCATTTTGTTAAACTTCCAGAGAGGGACTTCCTG...GGAAGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | AGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGTTGCGATCCAACTCCTaGGAGAGACCAGAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: RSNFSGPCQLLSAVVSRVLRSNS*ERPEHR Trigger: GCGGTGCTCTGGTCTCTCGCAGGAGTTGGATCGCAA...CACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
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| CDS-3UTR GCA 90 bp | GATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCACTTCTCCAGCCCGGTaGGAAAGGATTCACTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: DLTFPRYLRCSLMPADLGTSPAR*ERIHLK Trigger: TTTCAAGTGAATCCTTTCGCACCGGGCTGGAGAAGT...GCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | GCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAACTTCTCCAGCCCGGTaGGAAAGGATTCACTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALTDLTFPRYLRCSLMPATSPAR*ERIHLK Trigger: TTTCAAGTGAATCCTTTCGCACCGGGCTGGAGAAGT...TGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: TFPRYLRCSLMPADLGPHQSINR*GPLFLY Trigger: ATAAAGAAACAGTGGACCCCACCTATTTATGGACTG...GTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | TCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTTCCAGGACAGGACTAGCCTaGTGTAACTTTACATATATT | + |
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Preference number: 4 (lower is better) Translates to: SDASRSWPPPSRANSHASRTGLA*CNFTYI Trigger: AATATATGTAAAGTTACATCAGGCTAGTCCTGTCCT...GGAAGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | GAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACACAGAAACACAGATCTaGCAGGTGACATCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: ELPLVHRRHRDKCLLRSNTETQI*QVTSTS Trigger: CGATGTGGATGTCACCTGTCAGATCTGTGTTTCTGT...GTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | ACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTACTTCTCCAGCCCGGTaGGAAAGGATTCACAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: TDLTFPRYLRCSLMPADLTSPAR*ERIHKD Trigger: GTCTTTGTGAATCCTTTCGCACCGGGCTGGAGAAGT...AAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081033.13 |
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| CDS-3UTR CCA 90 bp | AGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGGATGGCTCTATGACATaGCACAATAAATCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: RYLRCSLMPADLGPHLQGDGSMT*HNKSEI Trigger: AATCTCTGATTTATTGTGCCATGTCATAGAGCCATC...CCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR CAA 72 bp | GCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTaGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ATSLVHVSYFLL*FLECGLPKLCP Trigger: AGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | GATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: DLTFPRYLRCSLMPADLGSIRVT*KLWSTK Trigger: CTTTGTGGACCACAGTTTTCAAGTAACACGGATAGA...GCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | AGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGACAGAAACACAGATCTaGCAGGTGACATCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: SFALTDLTFPRYLRCSLMTETQI*QVTSTS Trigger: CGATGTGGATGTCACCTGTCAGATCTGTGTTTCTGT...CATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | CCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAATTCTTCTTGGGTTTCTaGTTTGATAGTCTTATAGGA | + |
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Preference number: 4 (lower is better) Translates to: PRYLRCSLMPADLGPHLQFFLGF*FDSLIG Trigger: TCCTATAAGACTATCAAAGCAGAAACCCAAGAAGAA...TTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CCA 90 bp | AGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGATCATAGTTTCTTCTTaGGTTTCTGCTTTGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: RYLRCSLMPADLGPHLQGIIVSS*VSALIV Trigger: GACTATCAAAGCAGAAACCCAAGAAGAAACTATGAT...CCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CCA 90 bp | TCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTTCCATCATAGTTTCTTCTTaGGTTTCTGCTTTGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: SDASRSWPPPSRANSHASIIVSS*VSALIV Trigger: GACTATCAAAGCAGAAACCCAAGAAGAAACTATGAT...GGAAGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | GCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCATGTATGATGGCTCTATaGCATGGCACAATAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: ALTDLTFPRYLRCSLMPACMMAL*HGTINQ Trigger: CTGATTTATTGTGCCATGTCATAGAGCCATCATACA...TGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | GTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAACAGAAACACAGATCTaGCAGGTGACATCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: VSRVRTSKALPLLILLSRTETQI*QVTSTS Trigger: CGATGTGGATGTCACCTGTCAGATCTGTGTTTCTGT...TCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR GCA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGACTTCTCCAGCCCGGTaGGAAAGGATTCACTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSAVVSRVRTSKALPLLTSPAR*ERIHLK Trigger: TTTCAAGTGAATCCTTTCGCACCGGGCTGGAGAAGT...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| 3UTR CAA 72 bp | TCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTaGCCCTTACTGATCTTACTTTCCCGAGGTACCTAC | + |
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Preference number: 4 (lower is better) Translates to: SAVVSRVRTSKA*PLLILLSRGTY Trigger: GTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | ACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTGCGAAAGGATTCACTTaGAAGGCTATGAACAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TSKALPLLILLSRGTYDAAKGFT*KAMNSS Trigger: TGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGC...AGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR TCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTACAGAAACACAGATCTaGCAGGTGACATCCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSTETQI*QVTSTS Trigger: CGATGTGGATGTCACCTGTCAGATCTGTGTTTCTGT...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | TACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTCTCTGGTCCATTACATATATTTTTACTaGGTGCCCTACCGTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTGGTEINAFSEATSLVHYIYFY*VPYRAV Trigger: TACGGCACGGTAGGGCACCCAGTAAAAATATATGTA...ATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCACCACTGTTTCTTTATTaGCACGATCAATATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTDLTFPRYLRCSLMPAPLFLY*HDQYPY Trigger: GTATGGATATTGATCGTGCCAATAAAGAAACAGTGG...TGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ELPLVHRRHRDKCLLRSNQSINR*GPLFLY Trigger: ATAAAGAAACAGTGGACCCCACCTATTTATGGACTG...GTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTGCGAAAGGATTCACTTaGAAGGCTATGAACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSAKGFT*KAMNSS Trigger: TGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGC...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EATSLVHVSYFLLLFLECSIRVT*KLWSTK Trigger: CTTTGTGGACCACAGTTTTCAAGTAACACGGATAGA...GCACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | CTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGATCTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVVSRVRTSKALPLLISIRVT*KLWSTK Trigger: CTTTGTGGACCACAGTTTTCAAGTAACACGGATAGA...GATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCTACATATATTTTTACTaGGTGCCCTACCGTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: EATSLVHVSYFLLLFLECYIYFY*VPYRAV Trigger: TACGGCACGGTAGGGCACCCAGTAAAAATATATGTA...GCACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
||
| CDS-3UTR CCA 90 bp | CGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCCACTGTTTCTTTATTaGCACGATCAATATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RRHRDKCLLRSNFSGPCQPLFLY*HDQYPY Trigger: GTATGGATATTGATCGTGCCAATAAAGAAACAGTGG...CTGACATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSYFLLLFLECGLPKLCPQSINR*GPLFLY Trigger: ATAAAGAAACAGTGGACCCCACCTATTTATGGACTG...AGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCAGGAAGTCCCTCTCTaGAAGTTTAACAAAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVSYFLLLFLECGLPKLCQEVPL*KFNKMA Trigger: TGCCATTTTGTTAAACTTCCAGAGAGGGACTTCCTG...GCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | ACTGATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTAGGACAGGACTAGCCTaGTGTAACTTTACATATATT | + |
|
Preference number: 4 (lower is better) Translates to: TDLTFPRYLRCSLMPADLRTGLA*CNFTYI Trigger: AATATATGTAAAGTTACATCAGGCTAGTCCTGTCCT...AAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGCGAAAGGATTCACTTaGAAGGCTATGAACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSEATSLVHVSYFLLLFLAKGFT*KAMNSS Trigger: TGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGC...TAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSSIRVT*KLWSTK Trigger: CTTTGTGGACCACAGTTTTCAAGTAACACGGATAGA...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGACAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVRTSKALPLLILLSRQSINR*GPLFLY Trigger: ATAAAGAAACAGTGGACCCCACCTATTTATGGACTG...TCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAVVSRVRTSKALPLLQSINR*GPLFLY Trigger: ATAAAGAAACAGTGGACCCCACCTATTTATGGACTG...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCTCGTACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTCATCATAGTTTCTTCTTaGGTTTCTGCTTTGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLVHRRHRDKCLLRSNFIIVSS*VSALIV Trigger: GACTATCAAAGCAGAAACCCAAGAAGAAACTATGAT...GAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGGATGGCTCTATGACATaGCACAATAAATCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LVHVSYFLLLFLECGLPKDGSMT*HNKSEI Trigger: AATCTCTGATTTATTGTGCCATGTCATAGAGCCATC...CTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GAACGTATTCATTTAAAGCATCCAGTAGCACTTGAACTTCCTCTCGTACACCGGCAGGAAGTCCCTCTCTaGAAGTTTAACAAAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERIHLKHPVALELPLVHRQEVPL*KFNKMA Trigger: TGCCATTTTGTTAAACTTCCAGAGAGGGACTTCCTG...CCGGTGTACGAGAGGAAGTTCAAGTGCTACTGGATGCTTTAAATGAATACGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTTGTATGATGGCTCTATaGCATGGCACAATAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSCMMAL*HGTINQ Trigger: CTGATTTATTGTGCCATGTCATAGAGCCATCATACA...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGCCACTGTTTCTTTATTaGCACGATCAATATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSAVVSRVRTSKALPLLPLFLY*HDQYPY Trigger: GTATGGATATTGATCGTGCCAATAAAGAAACAGTGG...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGATGGCTCTATGACATaGCACAATAAATCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EATSLVHVSYFLLLFLECDGSMT*HNKSEI Trigger: AATCTCTGATTTATTGTGCCATGTCATAGAGCCATC...GCACTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR TCA 90 bp | GAACGTATTCATTTAAAGCATCCAGTAGCACTTGAACTTCCTCTCGTACACCGGAGGACAGGACTAGCCTaGTGTAACTTTACATATATT | + |
|
Preference number: 4 (lower is better) Translates to: ERIHLKHPVALELPLVHRRTGLA*CNFTYI Trigger: AATATATGTAAAGTTACATCAGGCTAGTCCTGTCCT...CCGGTGTACGAGAGGAAGTTCAAGTGCTACTGGATGCTTTAAATGAATACGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTTCTTCTTGGGTTTCTaGTTTGATAGTCTTATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLRSNFSGPCQLLSAVVFFLGF*FDSLIG Trigger: TCCTATAAGACTATCAAAGCAGAAACCCAAGAAGAA...AACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | GAACGTATTCATTTAAAGCATCCAGTAGCACTTGAACTTCCTCTCGTACACCGGGATGGCTCTATGACATaGCACAATAAATCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ERIHLKHPVALELPLVHRDGSMT*HNKSEI Trigger: AATCTCTGATTTATTGTGCCATGTCATAGAGCCATC...CCGGTGTACGAGAGGAAGTTCAAGTGCTACTGGATGCTTTAAATGAATACGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTTTCTTCTTGGGTTTCTaGTTTGATAGTCTTATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRSNFSGPCQLLSAVVSFFLGF*FDSLIG Trigger: TCCTATAAGACTATCAAAGCAGAAACCCAAGAAGAA...AGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAATCATAGTTTCTTCTTaGGTTTCTGCTTTGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSEATSLVHVSYFLLLFLIIVSS*VSALIV Trigger: GACTATCAAAGCAGAAACCCAAGAAGAAACTATGAT...TAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | AGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RYLRCSLMPADLGPHLQGQQVAQ*LCRPSF Trigger: AAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTG...CCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGCAAACAGCCATGCTCTAAAGAGCAGGTCATaGTGTCTTCCTACACAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSDASRSWPPPSRANSHALKSRS*CLPTQD Trigger: ATCTTGTGTAGGAAGACACAATGACCTGCTCTTTAG...AGCATGGCTGTTTGCCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | GATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLTFPRYLRCSLMPADLGQQVAQ*LCRPSF Trigger: AAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTG...GCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS GCA 90 bp | AACGTTCCAGGACTACAGACCACGCAACAGGTAGCACAATTGCTGTaGAGACCTTCGTTTTTCCCAAAGCCTGGTCGACAATTGTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: NVPGLQTTQQVAQLL*RPSFFPKPGRQLSI Trigger: GATAGACAATTGTCGACCAGGCTTTGGGAAAAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTGCGTGGTCTGTAGTCCTGGAACGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | AGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCCCACCTTCAAGGGTCCACTGTTTCTTTATaGGCACGATCAATATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: RYLRCSLMPADLGPHLQGSTVSL*ARSISI Trigger: TATGGATATTGATCGTGCCAATAAAGAAACAGTGGA...CCCTTGAAGGTGGGGGCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
||
| CDS TCA 90 bp | TCGTTTTTCCCAAAGCCTGGTCGACAATTGTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAGTGCATAGCTGGGACCGTTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFPKPGRQLSIRVT*KLWSTKCIAGTVLL Trigger: CAACAGAACGGTCCCAGCTATGCACTTTGTGGACCACAGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGGGAAAAACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS CCA 90 bp | ACAGGTAGCACAATTGCTGTGCAGACCTTCGTTTTTCCCAAAGCCTaGTCGACAATTGTCTATCCGTGTTACTTGAAAACTGTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGSTIAVQTFVFPKA*STIVYPCYLKTVVH Trigger: GTGGACCACAGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGGGAAAAACGAAGGTCTGCACAGCAATTGTGCTACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTCAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSKALPLLILLSRGTYDAQQVAQ*LCRPSF Trigger: AAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTG...AGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGCAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSAVVSRVRTSKALPLLQQVAQ*LCRPSF Trigger: AAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTG...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS GCA 90 bp | GTCTTCACAGTCAGCAGAGCGGTTGCACAAACTTCTCCAGCCCGGTaGGAAAGGATTCACAAAGACCAGAAAGTCATATTTCTTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VFTVSRAVAQTSPAR*ERIHKDQKVIFLLY Trigger: ATAAAGAAGAAATATGACTTTCTGGTCTTTGTGAATCCTTTCGCACCGGGCTGGAGAAGTTTGTGCAACCGCTCTGCTGACTGTGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081033.13 |
||
| CDS-3UTR CAA 90 bp | GATCTTACTTTCCCGAGGTACCTACGATGCTCTCTGATGCCAGCAGATCTTGGCCCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: DLTFPRYLRCSLMPADLGPVLLC*LYLSGY Trigger: ATAGCCAGATAAATATAACAAACACAGGAGAACTGG...GCCAAGATCTGCTGGCATCAGAGAGCATCGTAGGTACCTCGGGAAAGTAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCTCTCGTACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTAATGTGTTTTCATTaGGCCCAGTCCATAAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELPLVHRRHRDKCLLRSNLMCFH*AQSINR Trigger: CCTATTTATGGACTGGGCCAAATGAAAACACATTAA...GTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTACGAGAGGAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGCTAAAGAGCAGGTCATaGTGTCTTCCTACACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: LLSAVVSRVRTSKALPLLLKSRS*CLPTQD Trigger: ATCTTGTGTAGGAAGACACAATGACCTGCTCTTTAG...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTAAAGAGCAGGTCATaGTGTCTTCCTACACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QLLSAVVSRVRTSKALPLLKSRS*CLPTQD Trigger: ATCTTGTGTAGGAAGACACAATGACCTGCTCTTTAG...TAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGATCCTAAAGAGCAGGTCATaGTGTCTTCCTACACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: LSAVVSRVRTSKALPLLILKSRS*CLPTQD Trigger: ATCTTGTGTAGGAAGACACAATGACCTGCTCTTTAG...GATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: CLLRSNFSGPCQLLSAVVVYPCY*KTVVHK Trigger: TTTGTGGACCACAGTTTTCAAGTAACACGGATAGAC...AACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSAVVSRVRTSKALPLLVYPCY*KTVVHK Trigger: TTTGTGGACCACAGTTTTCAAGTAACACGGATAGAC...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | ACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: TSKALPLLILLSRGTYDAVYPCY*KTVVHK Trigger: TTTGTGGACCACAGTTTTCAAGTAACACGGATAGAC...AGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | TTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTACAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTT | + |
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Preference number: 5 (lower is better) Translates to: FSEATSLVHVSYFLLLFLQQVAQ*LCRPSF Trigger: AAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTG...TAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | TACACCGGAGGCACAGAGATAAATGCCTTCTCAGAAGCAACTTCTCTGGTCCATCCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: YTGGTEINAFSEATSLVHPVLLC*LYLSGY Trigger: ATAGCCAGATAAATATAACAAACACAGGAGAACTGG...ATGGACCAGAGAAGTTGCTTCTGAGAAGGCATTTATCTCTGTGCCTCCGGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | GAACGTATTCATTTAAAGCATCCAGTAGCACTTGAACTTCCTCTCGTACACCGGGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: ERIHLKHPVALELPLVHRVYPCY*KTVVHK Trigger: TTTGTGGACCACAGTTTTCAAGTAACACGGATAGAC...CCGGTGTACGAGAGGAAGTTCAAGTGCTACTGGATGCTTTAAATGAATACGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: SEATSLVHVSYFLLLFLEVYPCY*KTVVHK Trigger: TTTGTGGACCACAGTTTTCAAGTAACACGGATAGAC...CTCTAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTATCCACTGTTTCTTTATaGGCACGATCAATATCCATA | + |
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Preference number: 5 (lower is better) Translates to: QLLSAVVSRVRTSKALPLSTVSL*ARSISI Trigger: TATGGATATTGATCGTGCCAATAAAGAAACAGTGGA...TAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | ACTTCCAAAGCTTTGCCCTTACTGATCTTACTTTCCCGAGGTACCTACGATGCTTCCACTGTTTCTTTATaGGCACGATCAATATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TSKALPLLILLSRGTYDASTVSL*ARSISI Trigger: TATGGATATTGATCGTGCCAATAAAGAAACAGTGGA...AGCATCGTAGGTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCTTACTGTTAATGTGTTTTCATTaGGCCCAGTCCATAAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSAVVSRVRTSKALPLLLMCFH*AQSINR Trigger: CCTATTTATGGACTGGGCCAAATGAAAACACATTAA...CAGTAAGGGCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | CATGTCAGCTACTTTCTGCTGTTGTTTCTAGAGTGCGGACTTCCAAAGCTTTGCCCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HVSYFLLLFLECGLPKLCPVLLC*LYLSGY Trigger: ATAGCCAGATAAATATAACAAACACAGGAGAACTGG...GCAAAGCTTTGGAAGTCCGCACTCTAGAAACAACAGCAGAAAGTAGCTGACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 90 bp | TTATTGGCACGATCAATATCCATACAAATAAGGACAGGACTAGCCTaGTGTAACTTTACATATATTTTTACTGGGTGCCCTACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLARSISIQIRTGLA*CNFTYIFTGCPTVP Trigger: CGGCACGGTAGGGCACCCAGTAAAAATATATGTAAAGTTACATCAGGCTAGTCCTGTCCTTATTTGTATGGATATTGATCGTGCCAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
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| CDS-3UTR CAA 90 bp | GAACGTATTCATTTAAAGCATCCAGTAGCACTTGAACTTCCTCTCGTACACCGGCCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ERIHLKHPVALELPLVHRPVLLC*LYLSGY Trigger: ATAGCCAGATAAATATAACAAACACAGGAGAACTGG...CCGGTGTACGAGAGGAAGTTCAAGTGCTACTGGATGCTTTAAATGAATACGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 |
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| CDS CCA 90 bp | ATGAACAGCTCATACAGGAAGTCCCTCTCTGGAAGTTTAACAAAATaGCATTTGTATGATGGCTCTATGACATGGCACAATAAATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MNSSYRKSLSGSLTK*HLYDGSMTWHNKSE Trigger: CTCTGATTTATTGTGCCATGTCATAGAGCCATCATACAAATGCCATTTTGTTAAACTTCCAGAGAGGGACTTCCTGTATGAGCTGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS-3UTR CAA 90 bp | TTCTCAGAAGCAACTTCTCTGGTCCATGTCAGCTACTTTCTGCTGTTGTTTCTACCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FSEATSLVHVSYFLLLFLPVLLC*LYLSGY Trigger: ATAGCCAGATAAATATAACAAACACAGGAGAACTGG...TAGAAACAACAGCAGAAAGTAGCTGACATGGACCAGAGAAGTTGCTTCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 90 bp | TTATTGGCACGATCAATATCCATACAAATAAGGACAGGACTAGCCTaGTGTAACTTTACATATATTTTTACTCCTGCGAGAGACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLARSISIQIRTGLA*CNFTYIFTPARDQS Trigger: GCTCTGGTCTCTCGCAGGAGTAAAAATATATGTAAAGTTACATCAGGCTAGTCCTGTCCTTATTTGTATGGATATTGATCGTGCCAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107513.3 |
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| CDS GCA 90 bp | GGTAAAACGCACGGCCATGTGGTAAGAATAATCAGGTTCCCGATATaGAAAGACCAGAAAGTCATATTTCTTCTTTATCATAGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKTHGHVVRIIRFPI*KDQKVIFLLYHSFF Trigger: GAAGAAACTATGATAAAGAAGAAATATGACTTTCTGGTCTTTGCATATCGGGAACCTGATTATTCTTACCACATGGCCGTGCGTTTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CCA 90 bp | TATTCCCTTTTAATGTGTTTTCATTTGGCCCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTATTGGCACGATCAATATCCATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSLLMCFHLAQSINR*GPLFLYWHDQYPYK Trigger: TTTGTATGGATATTGATCGTGCCAATAAAGAAACAGTGGACCCCACCTATTTATGGACTGGGCCAAATGAAAACACATTAAAAGGGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107513.3 |
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| CDS CCA 90 bp | AGGAAATCCTTCAGTACCAGTTCTCCTGTGTTTGTTATATTTATCTaGCTATTCCCTTTTAATGTGTTTTCATTTGGCCCAGTCCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: RKSFSTSSPVFVIFI*LFPFNVFSFGPVHK Trigger: TTTATGGACTGGGCCAAATGAAAACACATTAAAAGGGAATAGCCAGATAAATATAACAAACACAGGAGAACTGGTACTGAAGGATTTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS GCA 72 bp | GTCAGCAGAGCGGTTGCACAAACTTCTCCAGCCCGGTaGGAAAGGATTCACTTGAAAGGCTATGAACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSRAVAQTSPAR*ERIHLKGYEQL Trigger: GAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGCACCGGGCTGGAGAAGTTTGTGCAACCGCTCTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CAA 90 bp | GGACTGAACGTTCCAGGACTACAGACCACGCAACAGGTAGCACAATaGCTGTGCAGACCTTCGTTTTTCCCAAAGCCTGGTCGACAATTG | + |
|
Preference number: 6 (lower is better) Translates to: GLNVPGLQTTQQVAQ*LCRPSFFPKPGRQL Trigger: CAATTGTCGACCAGGCTTTGGGAAAAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTGCGTGGTCTGTAGTCCTGGAACGTTCAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS GCA 72 bp | GGACTACAGACCACGCAACAGGTAGCACAATTGCTGTaGAGACCTTCGTTTTTCCCAAAGCCTGGTCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: GLQTTQQVAQLL*RPSFFPKPGRQ Trigger: TTGTCGACCAGGCTTTGGGAAAAACGAAGGTCTGCACAGCAATTGTGCTACCTGTTGCGTGGTCTGTAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 72 bp | TCCAGCCCGGTGCGAAAGGATTCACTTGAAAGGCTATaGACAGCTCATACAGGAAGTCCCTCTCTGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSPVRKDSLERL*TAHTGSPSLEV Trigger: AACTTCCAGAGAGGGACTTCCTGTATGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGCACCGGGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 72 bp | CACAAACTTCTCCAGCCCGGTGCGAAAGGATTCACTTaGAAGGCTATGAACAGCTCATACAGGAAGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HKLLQPGAKGFT*KAMNSSYRKSL Trigger: GAGGGACTTCCTGTATGAGCTGTTCATAGCCTTTCAAGTGAATCCTTTCGCACCGGGCTGGAGAAGTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017339.12 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 72 bp | AATTCTTCCATCCGATCTCTCGCCTTGAGGACGTTGTaGTTCGTGATGTCTTCACAGTCAGCAGAGCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSIRSLALRTL*FVMSSQSAERL Trigger: CAACCGCTCTGCTGACTGTGAAGACATCACGAATCACAACGTCCTCAAGGCGAGAGATCGGATGGAAGAATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 72 bp | CCAAAGCCTGGTCGACAATTGTCTATCCGTGTTACTTaGAAACTGTGGTCCACAAAGTGCATAGCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PKPGRQLSIRVT*KLWSTKCIAGT Trigger: GGTCCCAGCTATGCACTTTGTGGACCACAGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS GCA 72 bp | GTCAGCAGAGCGGTTGCACAAACTTCTCCAGCCCGGTaGGAAAGGATTCACAAAGACCAGAAAGTCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: VSRAVAQTSPAR*ERIHKDQKVIF Trigger: AAATATGACTTTCTGGTCTTTGTGAATCCTTTCGCACCGGGCTGGAGAAGTTTGTGCAACCGCTCTGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081033.13 |
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| CDS CAA 72 bp | CCCAAAGCCTGGTCGACAATTGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAAGTGCATAGCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PKAWSTIVYPCY*KTVVHKVHSWD Trigger: GTCCCAGCTATGCACTTTGTGGACCACAGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CAA 90 bp | TTCGTTTTTCCCAAAGCCTGGTCGACAATTGTCTATCCGTGTTACTaGAAAACTGTGGTCCACAAAGTGCATAGCTGGGACCGTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FVFPKAWSTIVYPCY*KTVVHKVHSWDRSV Trigger: AACAGAACGGTCCCAGCTATGCACTTTGTGGACCACAGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGGGAAAAACGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CCA 72 bp | ACAATTGCTGTGCAGACCTTCGTTTTTCCCAAAGCCTaGTCGACAATTGTCTATCCGTGTTACTTGAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: TIAVQTFVFPKA*STIVYPCYLKT Trigger: AGTTTTCAAGTAACACGGATAGACAATTGTCGACCAGGCTTTGGGAAAAACGAAGGTCTGCACAGCAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CCA 72 bp | TTAATGTGTTTTCATTTGGCCCAGTCCATAAATAGGTaGGGTCCACTGTTTCTTTATTGGCACGATCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: LMCFHLAQSINR*GPLFLYWHDQY Trigger: ATATTGATCGTGCCAATAAAGAAACAGTGGACCCCACCTATTTATGGACTGGGCCAAATGAAAACACATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS CAA 72 bp | GCTCCAGGAAATCCTTCAGTACCAGTTCTCCTGTGTTaGTTATATTTATCTGGCTATTCCCTTTTAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: APGNPSVPVLLC*LYLSGYSLLMC Trigger: ACACATTAAAAGGGAATAGCCAGATAAATATAACAAACACAGGAGAACTGGTACTGAAGGATTTCCTGGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 ENSMUST00000107509.8 ENSMUST00000107511.8 ENSMUST00000107513.3 |
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| CDS TCA 72 bp | CGATCAATATCCATACAAATAAGGACAGGACTAGCCTaGTGTAACTTTACATATATTTTTACTGGGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSISIQIRTGLA*CNFTYIFTGCP Trigger: AGGGCACCCAGTAAAAATATATGTAAAGTTACATCAGGCTAGTCCTGTCCTTATTTGTATGGATATTGATCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017339.12 ENSMUST00000081033.13 |
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| CDS TCA 72 bp | CGATCAATATCCATACAAATAAGGACAGGACTAGCCTaGTGTAACTTTACATATATTTTTACTCCTGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSISIQIRTGLA*CNFTYIFTPAR Trigger: TCTCGCAGGAGTAAAAATATATGTAAAGTTACATCAGGCTAGTCCTGTCCTTATTTGTATGGATATTGATCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107513.3 |
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