Pregenerated sensors for ZPBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020193Ensembl transcript IDs: ENSMUST00000020413.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGCAATTACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTaGCTTCTTCTGTATGAGAATACTGAGGCTGCACTTGTTCACAGG | + |
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Preference number: 1 (lower is better) Translates to: KAITTRANQEQPQAN*LLLYENTEAALVHR Trigger: CCTGTGAACAAGTGCAGCCTCAGTATTCTCATACAGAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGTAATTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 90 bp | GATCTCAGTAAGATCCAACTATTTGGTTTTCCATCCTTGAGCGGCTaGTGTCAAAAGCAAAGCAGGCAACGTCTCACAGAGAAGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: DLSKIQLFGFPSLSG*CQKQSRQRLTEKMK Trigger: CTTCATCTTCTCTGTGAGACGTTGCCTGCTTTGCTTTTGACATCAGCCGCTCAAGGATGGAAAACCAAATAGTTGGATCTTACTGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 90 bp | GAAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTaGGTGTCATCCTTAGAGCCCAGTTCTTTTGATATCTCTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: EVQSRPGFTIYKGNN*VSSLEPSSFDISTL Trigger: CAGAGTAGAGATATCAAAAGAACTGGGCTCTAAGGATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 90 bp | AAAGACACACTTCTATTGCATGTCTACTCCTATAAAGATGGTCTATaGCTTCCGGAAGACACTGTTCTCCAGACTTATCACCACCATTAC | + |
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Preference number: 1 (lower is better) Translates to: KDTLLLHVYSYKDGL*LPEDTVLQTYHHHY Trigger: GTAATGGTGGTGATAAGTCTGGAGAACAGTGTCTTCCGGAAGCCATAGACCATCTTTATAGGAGTAGACATGCAATAGAAGTGTGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR GCA 90 bp | GAACATTCAATGGTAGCTACATTCTCAAACGTTGTAAGAGATTTTTaGGGCAGGTTCTCACATAGTCCAAGCTCTCCTTGGACTTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: EHSMVATFSNVVRDF*GRFSHSPSSPWTFD Trigger: ATCAAAAGTCCAAGGAGAGCTTGGACTATGTGAGAACCTGCCGCAAAAATCTCTTACAACGTTTGAGAATGTAGCTACCATTGAATGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 90 bp | GTAAGAGATTTTTGCGGCAGGTTCTCACATAGTCCAAGCTCTCCTTaGACTTTTGATCTTCCTGCCATCAGCTTCAAATTATTAAGATTA | + |
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Preference number: 1 (lower is better) Translates to: VRDFCGRFSHSPSSP*TFDLPAISFKLLRL Trigger: TAATCTTAATAATTTGAAGCTGATGGCAGGAAGATCAAAAGTCCAAGGAGAGCTTGGACTATGTGAGAACCTGCCGCAAAAATCTCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 90 bp | AACATCACCCAATACAGAACATTTGAAACAATCTTTAAAAGGCAGTaGCAAAGGAGTCATCTGGTGTCAGATGCAGCTAACCATTATCAT | + |
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Preference number: 1 (lower is better) Translates to: NITQYRTFETIFKRQ*QRSHLVSDAANHYH Trigger: ATGATAATGGTTAGCTGCATCTGACACCAGATGACTCCTTTGTCACTGCCTTTTAAAGATTGTTTCAAATGTTCTGTATTGGGTGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | GTGCTAATGATGAAAGCCCAGAGGAAGAAAGCAATTACCACCAGGGCTAACCAAGTCTCACAGAGAAGATaGAGGAAATGTGAACCGGCT | + |
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Preference number: 2 (lower is better) Translates to: VLMMKAQRKKAITTRANQVSQRR*RKCEPA Trigger: AGCCGGTTCACATTTCCTTCATCTTCTCTGTGAGAC...TTGGTTAGCCCTGGTGGTAATTGCTTTCTTCCTCTGGGCTTTCATCATTAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCAATTACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTGCCTTCTTCTGTTGGGAGACAAACTaGTTCAGCCTACTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: KQLPPGLTKNNHRPIAFFCWETN*FSLLRT Trigger: TGTTCTCAGTAGGCTGAAGCAGTTTGTCTCCCAACA...GAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGTAATTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCCTCTCCTTGGACTTTTaGTCTTCCTGCCATCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LPKQYNTHCVACQRKEDILSLDF*SSCHQL Trigger: AAGCTGATGGCAGGAAGATCAAAAGTCCAAGGAGAG...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAATGATGAAAGCCCAGAGGAAGAAAGCAATTACCACCAGGGCTAACCAACAACCACAGGCCAATTaGCTTCTTCTGTATGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VLMMKAQRKKAITTRANQQPQAN*LLLYEN Trigger: ATTCTCATACAGAAGAAGGCAATTGGCCTGTGGTTG...TTGGTTAGCCCTGGTGGTAATTGCTTTCTTCCTCTGGGCTTTCATCATTAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCAGCAGCAGTGACTTCTaGCACACAGCATGCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: LPKQYNTHCVACQRKEDISSSDF*HTACIL Trigger: TAAAATGCATGCTGTGTGTCAGAAGTCACTGCTGCT...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGCCAGAGAAAAGAAGACATCTAAAAACCTCTATGAGCTATAAAGCAGCAGACAAAGGAGTCATCTaGTGTCAGATGCAGCTAACC | + |
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Preference number: 2 (lower is better) Translates to: CLPEKRRHLKTSMSYKAADKGVI*CQMQLT Trigger: GGTTAGCTGCATCTGACACCAGATGACTCCTTTGTC...TGCTGCTTTATAGCTCATAGAGGTTTTTAGATGTCTTCTTTTCTCTGGCAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCAATTACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTGCCTTCTTCCTATGCTTCTATGTCTaGTTTAAGAGTCTGTCAACT | + |
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Preference number: 2 (lower is better) Translates to: KQLPPGLTKNNHRPIAFFLCFYV*FKSLST Trigger: AGTTGACAGACTCTTAAACCAGACATAGAAGCATAG...GAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGTAATTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTTTGGTTTTCCATCCTTaGGCGGCTGATGTCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ALVLILLITTYAVTLSAILVFHP*AADVKS Trigger: GCTTTTGACATCAGCCGCTCAAGGATGGAAAACCAA...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGCCAGAGAAAAGAAGACATCTAAAAACCTCTATGAGCTATAAAGCAGCACAGTACTGGATTGAATaGGGACACCGTATCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: CLPEKRRHLKTSMSYKAAQYWIE*GHRIFV Trigger: TACAAAGATACGGTGTCCTCATTCAATCCAGTACTG...TGCTGCTTTATAGCTCATAGAGGTTTTTAGATGTCTTCTTTTCTCTGGCAGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR GCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCGTTGTAAGAGATTTTTaGGGCAGGTTCTCACATAGT | + |
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Preference number: 2 (lower is better) Translates to: LPKQYNTHCVACQRKEDIVVRDF*GRFSHS Trigger: ACTATGTGAGAACCTGCCGCAAAAATCTCTTACAAC...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGGCCTATGCTTCTATGTCTGGTTTAAGAGTCTGTCAACTGATCATTTATACTTTTATGTTGAATaGGCTGCTGGGTCCCACAAG | + |
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Preference number: 2 (lower is better) Translates to: ITGLCFYVWFKSLSTDHLYFYVE*AAGSHK Trigger: CTTGTGGGACCCAGCAGCTCATTCAACATAAAAGTA...TAAATGATCAGTTGACAGACTCTTAAACCAGACATAGAAGCATAGGCCTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGGCCTATGCTTCTATGTCTGGTTTAAGAGTCTGTCAACTGATCATTTAATCTTTAAAAGGCAGTaGCAAAGGAGTCATCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: ITGLCFYVWFKSLSTDHLIFKRQ*QRSHLV Trigger: CACCAGATGACTCCTTTGTCACTGCCTTTTAAAGAT...TAAATGATCAGTTGACAGACTCTTAAACCAGACATAGAAGCATAGGCCTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTTCTGCTCTCCTAGGTTaGCAATTGGAAGAATATATT | + |
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Preference number: 2 (lower is better) Translates to: ALVLILLITTYAVTLSAISALLG*QLEEYI Trigger: AATATATTCTTCCAATTGTCAACCTAGGAGAGCAGA...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR TCA 90 bp | AATACAGAACATTTGAAACAATCTTTAAAAGGCAGTGACAAAGGAGTCATCTGGAATATACTTTTATGTTaGATGAGCTGCTGGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: NTEHLKQSLKGSDKGVIWNILLC*MSCWVP Trigger: TGGGACCCAGCAGCTCATTCAACATAAAAGTATATT...CCAGATGACTCCTTTGTCACTGCCTTTTAAAGATTGTTTCAAATGTTCTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR GCA 90 bp | ATGAGAATACTGAGGCTGCACTTGTTCACAGGAAGATATAATAGGATCTTTTCTTACACTGATATTAAATaGCACCATTTCTCTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: MRILRLHLFTGRYNRIFSYTDIK*HHFSRT Trigger: AGTCCTAGAGAAATGGTGGCATTTAATATCAGTGTA...AGAAAAGATCCTATTATATCTTCCTGTGAACAAGTGCAGCCTCAGTATTCTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR GCA 72 bp | ACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTaGCTTCTTCTGTATGAGAATACTGAGGCTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: TTRANQEQPQAN*LLLYENTEAAL Trigger: AAGTGCAGCCTCAGTATTCTCATACAGAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATGTCCTAGAAGCACTGTaGGGAGACAAACTGCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: KCRAGRGSQFTREIIECHVLEAL*GDKLLQ Trigger: CTGAAGCAGTTTGTCTCCCAACAGTGCTTCTAGGAC...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACAGCTGCTGATAGCTGGTTCTTTGATAACCTCCTTTCCCAGTGTTTGCCCCAGGACATGTAATTaGAAACTGGCTTTGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: KLQLLIAGSLITSFPSVCPRTCN*KLALSC Trigger: ACAGCTCAAAGCCAGTTTCAAATTACATGTCCTGGG...GCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 72 bp | AAGATCCAACTATTTGGTTTTCCATCCTTGAGCGGCTaGTGTCAAAAGCAAAGCAGGCAACGTCTCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: KIQLFGFPSLSG*CQKQSRQRLTE Trigger: CTCTGTGAGACGTTGCCTGCTTTGCTTTTGACATCAGCCGCTCAAGGATGGAAAACCAAATAGTTGGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACAGCTGCTGATAGCTGGTTCTTTGATAACCTCCTTTCCCAGTGTTTGCATAATACTCACTGTGTaGCCTGCCAGAGAAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KLQLLIAGSLITSFPSVCIILTV*PAREKK Trigger: CTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTAT...GCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 72 bp | ATCTCAGTAAGATCCAACTATTTGGTTTTCCATCCTTaGGCGGCTGATGTCAAAAGCAAAGCAGGCAACGTC | + |
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Preference number: 3 (lower is better) Translates to: ISVRSNYLVFHP*AADVKSKAGNV Trigger: GACGTTGCCTGCTTTGCTTTTGACATCAGCCGCTCAAGGATGGAAAACCAAATAGTTGGATCTTACTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 72 bp | TTTTGCGGCAGGTTCTCACATAGTCCAAGCTCTCCTTaGACTTTTGATCTTCCTGCCATCAGCTTCAAATTA | + |
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Preference number: 3 (lower is better) Translates to: FCGRFSHSPSSP*TFDLPAISFKL Trigger: TAATTTGAAGCTGATGGCAGGAAGATCAAAAGTCCAAGGAGAGCTTGGACTATGTGAGAACCTGCCGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCGCATACAGTACTGGATaGAATGAGGACACCGTATCT | + |
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Preference number: 3 (lower is better) Translates to: LPKQYNTHCVACQRKEDIAYSTG*NEDTVS Trigger: AGATACGGTGTCCTCATTCAATCCAGTACTGTATGC...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATAATTTGAAACTGGCTTaGAGCTGTCAAAGGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: KCRAGRGSQFTREIIECHNLKLA*SCQRPS Trigger: ACTTGGCCTTTGACAGCTCAAAGCCAGTTTCAAATT...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 72 bp | AGAAGCACTGTTGGGAGACAAACTGCTTCAGCCTACTaGGAACATTCAATGGTAGCTACATTCTCAAACGTT | + |
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Preference number: 3 (lower is better) Translates to: RSTVGRQTASAY*EHSMVATFSNV Trigger: AACGTTTGAGAATGTAGCTACCATTGAATGTTCTCAGTAGGCTGAAGCAGTTTGTCTCCCAACAGTGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 72 bp | AGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTaGGTGTCATCCTTAGAGCCCAGTTCTTTTGATATC | + |
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Preference number: 3 (lower is better) Translates to: SRPGFTIYKGNN*VSSLEPSSFDI Trigger: GATATCAAAAGAACTGGGCTCTAAGGATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 72 bp | TATGGGAGCTTACAAAAAGCTACAGCTGCTGATAGCTaGTTCTTTGATAACCTCCTTTCCCAGTGTTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: YGSLQKATAADS*FFDNLLSQCLL Trigger: AAGCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTTTTTGTAAGCTCCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 72 bp | CTTCTATTGCATGTCTACTCCTATAAAGATGGTCTATaGCTTCCGGAAGACACTGTTCTCCAGACTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: LLLHVYSYKDGL*LPEDTVLQTYH Trigger: GTGATAAGTCTGGAGAACAGTGTCTTCCGGAAGCCATAGACCATCTTTATAGGAGTAGACATGCAATAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTCTGATAGCTGGTTCTTaGATAACCTCCTTTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: ALVLILLITTYAVTLSAILIAGS*ITSFPS Trigger: ACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAG...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR TCA 72 bp | CACCACCATTACAGCTCTACCTCTGCTCTCCTAGGTTaGCAATTGGAAGAATATATTGAATCAATCCCAATA | + |
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Preference number: 3 (lower is better) Translates to: HHHYSSTSALLG*QLEEYIESIPI Trigger: TATTGGGATTGATTCAATATATTCTTCCAATTGTCAACCTAGGAGAGCAGAGGTAGAGCTGTAATGGTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 72 bp | ATTGGGATAGTTTCAAGAAGTTTTAGAGGAGGAGACTaGGGTCCTAGAAGTTACAGGATGAATATGCTAGTT | + |
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Preference number: 3 (lower is better) Translates to: IGIVSRSFRGGD*GPRSYRMNMLV Trigger: AACTAGCATATTCATCCTGTAACTTCTAGGACCCCAGTCTCCTCCTCTAAAACTTCTTGAAACTATCCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR-3UTR CAA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTAAATATACTTTTATGTaGAATGAGCTGCTGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ALVLILLITTYAVTLSAIKYTFM*NELLGP Trigger: GGGACCCAGCAGCTCATTCAACATAAAAGTATATTT...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CCA 72 bp | AAACAATCTTTAAAAGGCAGTGACAAAGGAGTCATCTaGTGTCAGATGCAGCTAACCATTATCATTAACCAA | + |
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Preference number: 3 (lower is better) Translates to: KQSLKGSDKGVI*CQMQLTIIINQ Trigger: TTGGTTAATGATAATGGTTAGCTGCATCTGACACCAGATGACTCCTTTGTCACTGCCTTTTAAAGATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTCAGAAGGTCGTTACCTaGCGCGCGCCCACCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ALVLILLITTYAVTLSAIQKVVT*RAPTRR Trigger: GCGGCGGGTGGGCGCGCGCCAGGTAACGACCTTCTG...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | AAGCAATTACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTGCCTTCTTCTCTGGGCACTTGGGATaGTTCAGGACATTTATGCCA | + |
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Preference number: 4 (lower is better) Translates to: KQLPPGLTKNNHRPIAFFSGHLG*FRTFMP Trigger: TGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGA...GAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGTAATTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATACTGTTGCAGGGAGCTaGATGGTATCGAGCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KCRAGRGSQFTREIIECHTVAGS*MVSSCE Trigger: TTCACAGCTCGATACCATGCAGCTCCCTGCAACAGT...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATTTTGGCCCATGCCATTaGAATGATGGGTCTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: KCRAGRGSQFTREIIECHFGPCH*NDGSTS Trigger: GCTGGTAGACCCATCATTCCAATGGCATGGGCCAAA...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR TCA 90 bp | ATTACAGGCCTATGCTTCTATGTCTGGTTTAAGAGTCTGTCAACTGATCATTTATTCCATCCCGGGGATTaGAGGATCCAGGGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ITGLCFYVWFKSLSTDHLFHPGD*RIQGCR Trigger: TCTGCAGCCCTGGATCCTTCAATCCCCGGGATGGAA...TAAATGATCAGTTGACAGACTCTTAAACCAGACATAGAAGCATAGGCCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATTTTCCTTTTGGCCCATaGCATTGGAATGATGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KCRAGRGSQFTREIIECHFPFGP*HWNDGS Trigger: AGACCCATCATTCCAATGGCATGGGCCAAAAGGAAA...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCATTTATGCCATACCCTaGAAAGCAGCGGTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LPKQYNTHCVACQRKEDIIYAIP*KAAVHP Trigger: TGGGTGAACCGCTGCTTTCCAGGGTATGGCATAAAT...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | TGCCTGCCAGAGAAAAGAAGACATCTAAAAACCTCTATGAGCTATAAAGCAGCAGCTTCAGGACATTTATaGCATACCCTGGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPEKRRHLKTSMSYKAAASGHL*HTLESS Trigger: GCTGCTTTCCAGGGTATGGCATAAATGTCCTGAAGC...TGCTGCTTTATAGCTCATAGAGGTTTTTAGATGTCTTCTTTTCTCTGGCAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | GCAGGTTCTCACATAGTCCAAGCTCTCCTTGGACTTTTGATCTTCCTGCCATCAAGGTCACTTGTGCAGTaGTATTTTCTGAAACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSHIVQALLGLLIFLPSRSLVQ*YFLKQV Trigger: AACTTGTTTCAGAAAATACCACTGCACAAGTGACCT...TGATGGCAGGAAGATCAAAAGTCCAAGGAGAGCTTGGACTATGTGAGAACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | AAGCTACAGCTGCTGATAGCTGGTTCTTTGATAACCTCCTTTCCCAGTGTTTGCACTATGGTCTGTACATaGCTTGGATCCTTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQLLIAGSLITSFPSVCTMVCT*LGSFFC Trigger: ACAGAAAAAGGATCCAAGCCATGTACAGACCATAGT...GCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR TCA 90 bp | AGTACAATAAGGAGACCCAGGACATGTAATTTGAAACTGGCTTTGAGCTGTCAAGTCTCTTCAAAGCTCTaGAATATGAGGCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STIRRPRTCNLKLALSCQVSSKL*NMRLPV Trigger: CACAGGAAGCCTCATATTTCAGAGCTTTGAAGAGAC...TTGACAGCTCAAAGCCAGTTTCAAATTACATGTCCTGGGTCTCCTTATTGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR TCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCCATGGTATCGAGCTGTaGACTGATAATAAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKQYNTHCVACQRKEDIHGIEL*TDNKTE Trigger: CTCGGTTTTATTATCAGTTCACAGCTCGATACCATG...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCTGTTATAGATACTGTTaGAGGGAGCTGCATGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LPKQYNTHCVACQRKEDICYRYC*RELHGI Trigger: GATACCATGCAGCTCCCTGCAACAGTATCTATAACA...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR GCA 90 bp | AAGTGCAGAGCAGGCCGGGGTTCACAATTTACAAGGGAAATAATTGAGTGTCATTGCAAACCAGCTCTTTaGATTTTAACACGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCRAGRGSQFTREIIECHCKPAL*ILTRWH Trigger: ATGCCATCGTGTTAAAATGCAAAGAGCTGGTTTGCA...ATGACACTCAATTATTTCCCTTGTAAATTGTGAACCCCGGCCTGCTCTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGTTCTCACATAGTCCAAGCTCTCCTTGGACTTTTGATCTTCCTGCCATCATGCATTTTAACACGATaGCATTCAGACTTAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSHIVQALLGLLIFLPSCILTR*HSDLIK Trigger: CTTGATTAAGTCTGAATGCCATCGTGTTAAAATGCA...TGATGGCAGGAAGATCAAAAGTCCAAGGAGAGCTTGGACTATGTGAGAACCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| 3UTR CAA 72 bp | CTAACAAGTACAATAAGGAGACCCAGGACATGTAATTaGAAACTGGCTTTGAGCTGTCAAAGGCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSTIRRPRTCN*KLALSCQRPSS Trigger: TGAACTTGGCCTTTGACAGCTCAAAGCCAGTTTCAAATTACATGTCCTGGGTCTCCTTATTGTACTTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| 3UTR CAA 72 bp | GCTTACAAAAAGCTACAGCTGCTGATAGCTGGTTCTTaGATAACCTCCTTTCCCAGTGTTTGCTTTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: AYKKLQLLIAGS*ITSFPSVCFTT Trigger: AGTTGTAAAGCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTTTTTGTAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| 3UTR CAA 72 bp | ATTGCCTTCTTCTGTATGAGAATACTGAGGCTGCACTaGTTCACAGGAAGATATAATAGGATCTTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAFFCMRILRLH*FTGRYNRIFSS Trigger: GCTAGAAAAGATCCTATTATATCTTCCTGTGAACAAGTGCAGCCTCAGTATTCTCATACAGAAGAAGGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS-3UTR CCA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTAGATTCCTCTACAGTTaGTTTATACTCGAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALVLILLITTYAVTLSAIRFLYS*FILEET Trigger: TGTTTCCTCGAGTATAAACCAACTGTAGAGGAATCT...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CCA 90 bp | AATACAGAACATTTGAAACAATCTTTAAAAGGCAGTGACAAAGGAGTCATCTGGGTATTTCTCAGTCGTTaGGTTACACATAGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NTEHLKQSLKGSDKGVIWVFLSR*VTHSTC Trigger: ACATGTGCTATGTGTAACCCAACGACTGAGAAATAC...CCAGATGACTCCTTTGTCACTGCCTTTTAAAGATTGTTTCAAATGTTCTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 90 bp | CCACACGCCGCCGACGGCCGAGCCTCGGCGCAGAAGGTCGTTACCTaGCGCGCGCCCACCCGCCGCCGGAAGTTGGCAGACGGCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PHAADGRASAQKVVT*RAPTRRRKLADGRP Trigger: CGGCCTGCCGTCTGCCAACTTCCGGCGGCGGGTGGGCGCGCGCCAGGTAACGACCTTCTGCGCCGAGGCTCGGCCGTCGGCGGCGTGTGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 90 bp | CGCAGAAGGTCGTTACCTGGCGCGCGCCCACCCGCCGCCGGAAGTTaGCAGACGGCAGGCCGGAAGGACGGACCGACGGACGCGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RRRSLPGARPPAAGS*QTAGRKDGPTDAPL Trigger: AAGTGGCGCGTCCGTCGGTCCGTCCTTCCGGCCTGCCGTCTGCCAACTTCCGGCGGCGGGTGGGCGCGCGCCAGGTAACGACCTTCTGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 90 bp | CCAGGCTGTTGTTGCACTGGAGGCAATGAGTTCCATCCCGGGGATTaGAGGATCCAGGGCTGCAGACCACACAGCACTCTGGGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGCCCTGGNEFHPGD*RIQGCRPHSTLGTW Trigger: CCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTTCAATCCCCGGGATGGAACTCATTGCCTCCAGTGCAACAACAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS GCA 90 bp | AAGGATCCAGGGCTGCAGACCACACAGCACTCTGGGCACTTGGGATaGTTCAGGACATTTATGCCATACCCTGGAAAGCAGCGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KDPGLQTTQHSGHLG*FRTFMPYPGKQRFT Trigger: GGTGAACCGCTGCTTTCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 90 bp | ATCCCGGGGATTGAAGGATCCAGGGCTGCAGACCACACAGCACTCTaGGCACTTGGGATGCTTCAGGACATTTATGCCATACCCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IPGIEGSRAADHTAL*ALGMLQDIYAIPWK Trigger: TTTCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTTCAATCCCCGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | TTACCCAAGCAGTATAATACTCACTGTGTTGCCTGCCAGAGAAAAGAAGACATCCAGCACTCTGGGCACTaGGGATGCTTCAGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPKQYNTHCVACQRKEDIQHSGH*GCFRTF Trigger: AAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTG...GATGTCTTCTTTTCTCTGGCAGGCAACACAGTGAGTATTATACTGCTTGGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS TCA 90 bp | ACGCTCACAGGAAAATGTGTCGATCCCACTATTTTCAGTGAATCTTaGGTCAAGTGGATACTTCTTGGCAGTCGAGCCAAATGTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TLTGKCVDPTIFSES*VKWILLGSRAKCPT Trigger: AGTTGGACATTTGGCTCGACTGCCAAGAAGTATCCACTTGACTCAAGATTCACTGAAAATAGTGGGATCGACACATTTTCCTGTGAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | AAGCTACAGCTGCTGATAGCTGGTTCTTTGATAACCTCCTTTCCCAGTGTTTGCAAACAAGTTTTCCTTTaGGCCCATGCCATTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KLQLLIAGSLITSFPSVCKQVFL*AHAIGM Trigger: CATTCCAATGGCATGGGCCAAAAGGAAAACTTGTTT...GCAAACACTGGGAAAGGAGGTTATCAAAGAACCAGCTATCAGCAGCTGTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | AAGCAATTACCACCAGGGCTAACCAAGAACAACCACAGGCCAATTGCCTTCTTCGAAGAACAATTCATTTaGCAAACCAGCTCTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KQLPPGLTKNNHRPIAFFEEQFI*QTSSLH Trigger: ATGCAAAGAGCTGGTTTGCAAAATGAATTGTTCTTC...GAAGAAGGCAATTGGCCTGTGGTTGTTCTTGGTTAGCCCTGGTGGTAATTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 90 bp | AACATATACGCTCACAGGAAAATGTGTCGATCCCACTATTTTCAGTaGATCTTGAGTCAAGTGGATACTTCTTGGCAGTCGAGCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NIYAHRKMCRSHYFQ*ILSQVDTSWQSSQM Trigger: CATTTGGCTCGACTGCCAAGAAGTATCCACTTGACTCAAGATTCACTGAAAATAGTGGGATCGACACATTTTCCTGTGAGCGTATATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 90 bp | AACATGTATAAACCCCACTCATGGTCTCTTCAAAGCTCTGAAATATaGGGCTTCCTGTGGAGGTCACTTGTGCAGTGGTATTTTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NMYKPHSWSLQSSEI*GFLWRSLVQWYFLK Trigger: TTTCAGAAAATACCACTGCACAAGTGACCTCCACAGGAAGCCTCATATTTCAGAGCTTTGAAGAGACCATGAGTGGGGTTTATACATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS GCA 90 bp | AAGTTTCTTCTCAAAAGAAATGTTATAGATACTGTTGCAGGGAGCTaGATGGTATCGAGCTGTGAACTGATAATAAAACCGAGGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KFLLKRNVIDTVAGS*MVSSCELIIKPRFT Trigger: CGTGAACCTCGGTTTTATTATCAGTTCACAGCTCGATACCATGCAGCTCCCTGCAACAGTATCTATAACATTTCTTTTGAGAAGAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | AGTACAATAAGGAGACCCAGGACATGTAATTTGAAACTGGCTTTGAGCTGTCAAGCCTTAGATAATCTTTaGGAAGCTTCACAACTATGG | + |
|
Preference number: 5 (lower is better) Translates to: STIRRPRTCNLKLALSCQALDNL*EASQLW Trigger: CCATAGTTGTGAAGCTTCCAAAAGATTATCTAAGGC...TTGACAGCTCAAAGCCAGTTTCAAATTACATGTCCTGGGTCTCCTTATTGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 90 bp | AAATGTTATAGATACTGTTGCAGGGAGCTGCATGGTATCGAGCTGTaGACTGATAATAAAACCGAGGTTCACGATAAGCATAAACAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KCYRYCCRELHGIEL*TDNKTEVHDKHKQC Trigger: ACATTGTTTATGCTTATCGTGAACCTCGGTTTTATTATCAGTTCACAGCTCGATACCATGCAGCTCCCTGCAACAGTATCTATAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | ATTACAGGCCTATGCTTCTATGTCTGGTTTAAGAGTCTGTCAACTGATCATTTATTGCAAACCAGCTCTTaGCATTTTAACACGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFYVWFKSLSTDHLLQTSS*HFNTMA Trigger: TGCCATCGTGTTAAAATGCAAAGAGCTGGTTTGCAA...TAAATGATCAGTTGACAGACTCTTAAACCAGACATAGAAGCATAGGCCTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS-3UTR CAA 90 bp | GCACTTGTGCTAATTTTGCTTATTACTACATACGCTGTGACACTTAGTGCCATTCACATGTGGACTCTTTaGATGAAGCATAACATATAC | + |
|
Preference number: 5 (lower is better) Translates to: ALVLILLITTYAVTLSAIHMWTL*MKHNIY Trigger: GTATATGTTATGCTTCATCAAAAGAGTCCACATGTG...AATGGCACTAAGTGTCACAGCGTATGTAGTAATAAGCAAAATTAGCACAAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 90 bp | AAGAACAATTCATTTTGCAAACCAGCTCTTTGCATTTTAACACGATaGCATTCAGACTTAATCAAGGATATTTCACAGGAAAGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KNNSFCKPALCILTR*HSDLIKDISQERSR Trigger: TCTTGACCTTTCCTGTGAAATATCCTTGATTAAGTCTGAATGCCATCGTGTTAAAATGCAAAGAGCTGGTTTGCAAAATGAATTGTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | GCCGACGGCCGAGCCTCGGCGCAGAAGGTCGTTACCTaGCGCGCGCCCACCCGCCGCCGGAAGTTGGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ADGRASAQKVVT*RAPTRRRKLAD Trigger: GTCTGCCAACTTCCGGCGGCGGGTGGGCGCGCGCCAGGTAACGACCTTCTGCGCCGAGGCTCGGCCGTCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CAA 90 bp | GCGCAGAAGGTCGTTACCTGGCGCGCGCCCACCCGCCGCCGGAAGTaGGCAGACGGCAGGCCGGAAGGACGGACCGACGGACGCGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: AQKVVTWRAPTRRRK*ADGRPEGRTDGRAT Trigger: AGTGGCGCGTCCGTCGGTCCGTCCTTCCGGCCTGCCGTCTGCCAACTTCCGGCGGCGGGTGGGCGCGCGCCAGGTAACGACCTTCTGCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 72 bp | AAGGACGGACCGACGGACGCGCCACTTCCGCTCGGGTaGTGTGCGGGAGGTGTGCTAGCTTGGGACCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KDGPTDAPLPLG*CAGGVLAWDPA Trigger: AGCTGGGTCCCAAGCTAGCACACCTCCCGCACATCACCCGAGCGGAAGTGGCGCGTCCGTCGGTCCGTCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 72 bp | TGTTGCACTGGAGGCAATGAGTTCCATCCCGGGGATTaGAGGATCCAGGGCTGCAGACCACACAGCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCTGGNEFHPGD*RIQGCRPHSTL Trigger: CAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTTCAATCCCCGGGATGGAACTCATTGCCTCCAGTGCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS TCA 72 bp | GCTCCATACACCAGGCTGTTGTTGCACTGGAGGCAATaGGTTCCATCCCGGGGATTGAAGGATCCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APYTRLLLHWRQ*VPSRGLKDPGL Trigger: CAGCCCTGGATCCTTCAATCCCCGGGATGGAACTCATTGCCTCCAGTGCAACAACAGCCTGGTGTATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CAA 90 bp | GGATTGAAGGATCCAGGGCTGCAGACCACACAGCACTCTGGGCACTaGGGATGCTTCAGGACATTTATGCCATACCCTGGAAAGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLKDPGLQTTQHSGH*GCFRTFMPYPGKQR Trigger: CCGCTGCTTTCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTTCAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CAA 72 bp | GATCCAGGGCTGCAGACCACACAGCACTCTGGGCACTaGGGATGCTTCAGGACATTTATGCCATACCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DPGLQTTQHSGH*GCFRTFMPYPG Trigger: TCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS GCA 72 bp | AGCACTCTGGGCACTTGGGATGCTTCAGGACATTTATaGCATACCCTGGAAAGCAGCGGTTCACCCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: STLGTWDASGHL*HTLESSGSPTP Trigger: TGGTGTGGGTGAACCGCTGCTTTCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | CTGAAGGGTTCCCTCAATGTAGTATATCTCAGGCAGTaGCTCCGCACGCTTGCCCAGGACTTCTACTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LKGSLNVVYLRQ*LRTLAQDFYLL Trigger: CAGCAAGTAGAAGTCCTGGGCAAGCGTGCGGAGCCACTGCCTGAGATATACTACATTGAGGGAACCCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | GCACTTGGGATGCTTCAGGACATTTATGCCATACCCTaGAAAGCAGCGGTTCACCCACACCATCTGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALGMLQDIYAIP*KAAVHPHHLKG Trigger: ACCCTTCAGATGGTGTGGGTGAACCGCTGCTTTCCAGGGTATGGCATAAATGTCCTGAAGCATCCCAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CAA 90 bp | TCGATCCCACTATTTTCAGTGAATCTTGAGTCAAGTGGATACTTCTaGGCAGTCGAGCCAAATGTCCAACTGCAGGGGGCGCCCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SIPLFSVNLESSGYF*AVEPNVQLQGAPAA Trigger: TGCTGCGGGCGCCCCCTGCAGTTGGACATTTGGCTCGACTGCCAAGAAGTATCCACTTGACTCAAGATTCACTGAAAATAGTGGGATCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | ATTGAAGGATCCAGGGCTGCAGACCACACAGCACTCTaGGCACTTGGGATGCTTCAGGACATTTATGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: IEGSRAADHTAL*ALGMLQDIYAI Trigger: TATGGCATAAATGTCCTGAAGCATCCCAAGTGCCCAGAGTGCTGTGTGGTCTGCAGCCCTGGATCCTTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CAA 72 bp | CTATTTTCAGTGAATCTTGAGTCAAGTGGATACTTCTaGGCAGTCGAGCCAAATGTCCAACTGCAGGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LFSVNLESSGYF*AVEPNVQLQGA Trigger: CGCCCCCTGCAGTTGGACATTTGGCTCGACTGCCAAGAAGTATCCACTTGACTCAAGATTCACTGAAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS TCA 72 bp | AAACCCCACTCATGGTCTCTTCAAAGCTCTGAAATATaGGGCTTCCTGTGGAGGTCACTTGTGCAGTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KPHSWSLQSSEI*GFLWRSLVQWY Trigger: ATACCACTGCACAAGTGACCTCCACAGGAAGCCTCATATTTCAGAGCTTTGAAGAGACCATGAGTGGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS TCA 72 bp | AGTGGCTCCGCACGCTTGCCCAGGACTTCTACTTGCTaGATGAAGAATCTCTCTATGAGATTTTTAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGSARLPRTSTC*MKNLSMRFLAL Trigger: TAAGGCTAAAAATCTCATAGAGAGATTCTTCATTCAGCAAGTAGAAGTCCTGGGCAAGCGTGCGGAGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS CAA 90 bp | TGGAGGTCACTTGTGCAGTGGTATTTTCTGAAACAAGTTTTCCTTTaGGCCCATGCCATTGGAATGATGGGTCTACCAGCTCTGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: WRSLVQWYFLKQVFL*AHAIGMMGLPALYF Trigger: GAAATACAGAGCTGGTAGACCCATCATTCCAATGGCATGGGCCAAAAGGAAAACTTGTTTCAGAAAATACCACTGCACAAGTGACCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS TCA 72 bp | GCTCACAGGAAAATGTGTCGATCCCACTATTTTCAGTaGATCTTGAGTCAAGTGGATACTTCTTGGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AHRKMCRSHYFQ*ILSQVDTSWQS Trigger: CGACTGCCAAGAAGTATCCACTTGACTCAAGATTCACTGAAAATAGTGGGATCGACACATTTTCCTGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS TCA 72 bp | AGATACTGTTGCAGGGAGCTGCATGGTATCGAGCTGTaGACTGATAATAAAACCGAGGTTCACGATAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RYCCRELHGIEL*TDNKTEVHDKH Trigger: ATGCTTATCGTGAACCTCGGTTTTATTATCAGTTCACAGCTCGATACCATGCAGCTCCCTGCAACAGTATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
||
| CDS GCA 72 bp | CTCAAAAGAAATGTTATAGATACTGTTGCAGGGAGCTaGATGGTATCGAGCTGTGAACTGATAATAAAACCG | + |
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Preference number: 6 (lower is better) Translates to: LKRNVIDTVAGS*MVSSCELIIKP Trigger: CGGTTTTATTATCAGTTCACAGCTCGATACCATGCAGCTCCCTGCAACAGTATCTATAACATTTCTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | TTAGCCTTAGATAATCTTTTGGAAGCTTCACAACTATaGTCTGTACATGGCTTGGATCCTTTTTCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LALDNLLEASQL*SVHGLDPFSVS Trigger: AGACACAGAAAAAGGATCCAAGCCATGTACAGACCATAGTTGTGAAGCTTCCAAAAGATTATCTAAGGCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS CCA 72 bp | TCATTTTGCAAACCAGCTCTTTGCATTTTAACACGATaGCATTCAGACTTAATCAAGGATATTTCACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SFCKPALCILTR*HSDLIKDISQE Trigger: TTCCTGTGAAATATCCTTGATTAAGTCTGAATGCCATCGTGTTAAAATGCAAAGAGCTGGTTTGCAAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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| CDS GCA 72 bp | AATGTGAAGAACAATTCATTTTGCAAACCAGCTCTTTaGATTTTAACACGATGGCATTCAGACTTAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: NVKNNSFCKPAL*ILTRWHSDLIK Trigger: CTTGATTAAGTCTGAATGCCATCGTGTTAAAATGCAAAGAGCTGGTTTGCAAAATGAATTGTTCTTCACATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020413.4 |
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