Pregenerated sensors for ZP3R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042554Ensembl transcript IDs: ENSMUST00000039862.11, ENSMUST00000128128.8, ENSMUST00000142416.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTGTGCTTCCCATTGCTaGTGGGTGGAGGGGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETCASHC*WVEGAH Trigger: GTGAGCCCCCTCCACCCATCAGCAATGGGAAGCACA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCTAGGACCTCCATCTaGCAGCTGGGTACCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETSRTSI*QLGTSG Trigger: CCCTGAGGTACCCAGCTGTCAGATGGAGGTCCTAGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCCTCCATCTGACAGCTaGGTACCTCAGGGTACCACG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETPPSDS*VPQGTT Trigger: CGTGGTACCCTGAGGTACCCAGCTGTCAGATGGAGG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR GCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTACCTTCAGGGCCCTGTaGACATCTTCTGGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETTFRAL*TSSGLE Trigger: CTCAAGCCCAGAAGATGTGCACAGGGCCCTGAAGGT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCCACAGTGCAGACAATaGAGGCATTGCCAAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETPQCRQ*RHCQGV Trigger: CACTCCTTGGCAATGCCTCCATTGTCTGCACTGTGG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTACAGGCAGGAGGGTGTaGTCTCCAAACACCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETTGRRV*SPNTYC Trigger: ACAGTAGGTGTTTGGAGACCACACCCTCCTGCCTGT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCACATCTTCTGGGCTTaGGAGGCAATGCAAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETHIFWA*EAMQEL Trigger: CAACTCTTGCATTGCCTCTCAAGCCCAGAAGATGTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR GCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCATCTCTCCCACTGTaGTTCCCATTGCTGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETSSLPL*FPLLMG Trigger: ACCCATCAGCAATGGGAAGCACAGTGGGAGAGATGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR GCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCCTGTTCACCACAGTaGAGACAATGGAGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETSCSPQ*RQWRHC Trigger: GCAATGCCTCCATTGTCTGCACTGTGGTGAACAGGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCCATTTGCTTCACAGTaGATCACACTGCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETPFASQ*ITLLPL Trigger: CAGAGGCAGCAGTGTGATCCACTGTGAAGCAAATGG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCAAGTCAGATTTTCCTaGCAAGTCACAGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETQVRFS*QVTVWG Trigger: TCCCCAGACTGTGACTTGTCAGGAAAATCTGACTTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR GCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCTCTGCTCACTATTCTaGAGTCTTCTAGGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETLCSLF*SLLGPP Trigger: TGGAGGTCCTAGAAGACTGCAGAATAGTGAGCAGAG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTATTCTCCCTTTTCTGTaGAGGACAGAGCTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETILPFL*RTELLV Trigger: CACCAAGAGCTCTGTCCTCCACAGAAAAGGGAGAAT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128128.8 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCATTTGGAACAGAGTTaGATGAGAGGTTCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETHLEQS*MRGSPQ Trigger: CTGTGGAGAACCTCTCATTCAACTCTGTTCCAAATG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCAGAAGATAGCCCTTTaGGCAGCTGAACTCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETQKIAL*AAELYD Trigger: ATCATAGAGTTCAGCTGCTCAAAGGGCTATCTTCTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCAACTCCTTTACCTTaGACCTCACACCGACTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETSTPLP*TSHRLV Trigger: AACTAGTCGGTGTGAGGTCCAAGGTAAAGGAGTTGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTACAAGAAAGATGGCTTaGATTGACTCTCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETTRKMA*IDSLEA Trigger: GGCTTCAAGAGAGTCAATTCAAGCCATCTTTCTTGT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTGGTACTATAGACCCATaGACCATTCTCATCACAAGA | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETGTIDP*TILITR Trigger: TCTTGTGATGAGAATGGTTCATGGGTCTATAGTACC...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTATCCACTTCTCTTTCTaGTGTTCCAATCGTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETIHFSF*CSNRSI Trigger: GATCGAACGATTGGAACATCAGAAAGAGAAGTGGAT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTACTCATACAACTGGTTaGTTGGAGAAGCAAACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETTHTTG*LEKQTV Trigger: TACCGTTTGCTTCTCCAACCAACCAGTTGTATGAGT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCTCCATATCTGGTGTTaGGCAACATATCCTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETLHIWC*ATYPFT Trigger: TGTGAAAGGATATGTTGCCCAACACCAGATATGGAG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTACATCCATTAGTAGATaGCCAAGTCAGATTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETTSISR*PSQIFL Trigger: CAGGAAAATCTGACTTGGTCATCTACTAATGGATGT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTATATGTTTGGGAAGGTaGAAAGAGCAAGACGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETICLGR*KEQDGF Trigger: AAAACCGTCTTGCTCTTTTCACCTTCCCAAACATAT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTGTCACATTGGTTTCTaGTATGTTTGGGAAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETCHIGF*YVWEGE Trigger: TTCACCTTCCCAAACATATCAGAAACCAATGTGACA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTGATCACATTGAATGGTaGTATTTTCCAGTTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETDHIEW*YFPVQH Trigger: ATGCTGAACTGGAAAATATCACCATTCAATGTGATC...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR TCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTATCCAGGATCACATTaGATGGTGATATTTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETYPGSH*MVIFSS Trigger: ACTGGAAAATATCACCATTCAATGTGATCCTGGATA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCATCACAAGAAAGATaGCTTGAATTGACTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETSSQER*LELTLL Trigger: CAAGAGAGTCAATTCAAGCCATCTTTCTTGTGATGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTTGGTGAACCAACTATaGTATATCCAGGATCACATT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETLVNQL*YIQDHI Trigger: AATGTGATCCTGGATATACCATAGTTGGTTCACCAA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTACCAAAAGGTCAGATaGAATTTCTACTTTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETYQKVR*NFYFPI Trigger: AATGGGAAAGTAGAAATTCCATCTGACCTTTTGGTA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CCA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTAAATATCTGGTATATTaGTACAACCATTGGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPFNRSGGVCQASCCVETKYLVY*YNHWVH Trigger: GTGAACCCAATGGTTGTACCAATATACCAGATATTT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCCACTGTGCTTCCCATaGCTGATGGGTGGAGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETPLCFP*LMGGGG Trigger: GCCCCCTCCACCCATCAGCAATGGGAAGCACAGTGG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS GCA 90 bp | ATGACTACAGAGCCAAACGTGTACAGGTCATCATCTCTCCCACTGTaGTTCCCATTGCTGATGGGTGGAGGGGGCTCACACGTGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: MTTEPNVYRSSSLPL*FPLLMGGGGSHVAI Trigger: AATTGCCACGTGTGAGCCCCCTCCACCCATCAGCAATGGGAAGCACAGTGGGAGAGATGATGACCTGTACACGTTTGGCTCTGTAGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS GCA 90 bp | TACACCTTCAGGGCCCTGTGCACATCTTCTGGGCTTGAGAGGCAATaGAAGAGTTGTGCGCCTCTGCTCACTATTCTGCAGTCTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: YTFRALCTSSGLERQ*KSCAPLLTILQSSR Trigger: CCTAGAAGACTGCAGAATAGTGAGCAGAGGCGCACAACTCTTGCATTGCCTCTCAAGCCCAGAAGATGTGCACAGGGCCCTGAAGGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCAGACAATGGAGGCATaGCCAAGGAGTGTGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETQTMEA*PRSVKV Trigger: CACCTTCACACTCCTTGGCAATGCCTCCATTGTCTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTGGAGGACAGAGCTCTaGGTGAGTGCATCTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETWRTEL*VSASEA Trigger: AGCTTCAGATGCACTCACCAAGAGCTCTGTCCTCCA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128128.8 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTGTCAACTCCTTTACCTaGGACCTCACACCGACTAGT | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETVNSFT*DLTPTS Trigger: ACTAGTCGGTGTGAGGTCCAAGGTAAAGGAGTTGAC...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTGACTCATACAACTGGTaGGTTGGAGAAGCAAACGGT | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETDSYNW*VGEANG Trigger: ACCGTTTGCTTCTCCAACCAACCAGTTGTATGAGTC...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCAGATGGGAAGGTTGTaGACTCATACAACTGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETQMGRL*THTTGW Trigger: CCAACCAGTTGTATGAGTCAACAACCTTCCCATCTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTATTTCTACTTTCCCATaGACCAACTCGCCTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETISTFP*TNSPGF Trigger: GAACCCAGGCGAGTTGGTCAATGGGAAAGTAGAAAT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CCA 90 bp | TGTCGAAATCCAGGGGCCAAGTATCCCTTCAGAATCTGCGGCCGATaGCAGACGATTTTTACACATTCTGGGAGAGAATCACTCCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CRNPGAKYPFRICGR*QTIFTHSGRESLQS Trigger: TGACTGGAGTGATTCTCTCCCAGAATGTGTAAAAATCGTCTGCCATCGGCCGCAGATTCTGAAGGGATACTTGGCCCCTGGATTTCGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CCA 90 bp | TCCCTTCAGAATCTGCGGCCGATGGCAGACGATTTTTACACATTCTaGGAGAGAATCACTCCAGTCAACTCCTTTACCTTGGACCTCACA | + |
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Preference number: 5 (lower is better) Translates to: SLQNLRPMADDFYTF*ERITPVNSFTLDLT Trigger: TGTGAGGTCCAAGGTAAAGGAGTTGACTGGAGTGATTCTCTCCCAGAATGTGTAAAAATCGTCTGCCATCGGCCGCAGATTCTGAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTTCATTTGGAACAGAGTaGAATGAGAGGTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETSFGTE*NERFST Trigger: TGTGGAGAACCTCTCATTCAACTCTGTTCCAAATGA...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTCACTGGTATTTCAATTaGGCCCCAATTTCAAATACT | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETHWYFN*APISNT Trigger: AGTATTTGAAATTGGGGCCAAATTGAAATACCAGTG...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTGTTTTGTTTGTCACATaGGTTTCTGATATGTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETVLFVT*VSDMFG Trigger: CCCAAACATATCAGAAACCAATGTGACAAACAAAAC...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS-3UTR CAA 90 bp | AAACCTTTTAACAGGAGTGGTGGTGTGTGTCAGGCCAGCTGCTGCGTGGAGACTATATCCAGGATCACATaGAATGGTGATATTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KPFNRSGGVCQASCCVETISRIT*NGDIFQ Trigger: CTGGAAAATATCACCATTCAATGTGATCCTGGATAT...AGTCTCCACGCAGCAGCTGGCCTGACACACACCACCACTCCTGTTAAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 90 bp | GATAGGTTTTGTTTGTCACATTGGTTTCTGATATGTTTGGGAAGGTaGAAAGAGCAAGACGGTTTTGCAGGCCTGAGTCTGCCTGACATG | + |
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Preference number: 5 (lower is better) Translates to: DRFCLSHWFLICLGR*KEQDGFAGLSLPDM Trigger: CATGTCAGGCAGACTCAGGCCTGCAAAACCGTCTTGCTCTTTTCACCTTCCCAAACATATCAGAAACCAATGTGACAAACAAAACCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 90 bp | CATATCTGGTGTTGGGCAACATATCCTTTCACATCCATTAGTAGATaGCCAAGTCAGATTTTCCTGACAAGTCACAGTCTGGGGATCGTT | + |
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Preference number: 5 (lower is better) Translates to: HIWCWATYPFTSISR*PSQIFLTSHSLGIV Trigger: AACGATCCCCAGACTGTGACTTGTCAGGAAAATCTGACTTGGTCATCTACTAATGGATGTGAAAGGATATGTTGCCCAACACCAGATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 72 bp | GTACACCTTCAGGGCCCTGTGCACATCTTCTGGGCTTaGGAGGCAATGCAAGAGTTGTGCGCCTCTGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: VHLQGPVHIFWA*EAMQELCASAH Trigger: GTGAGCAGAGGCGCACAACTCTTGCATTGCCTCTCAAGCCCAGAAGATGTGCACAGGGCCCTGAAGGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS GCA 72 bp | AGGGCCCTGTGCACATCTTCTGGGCTTGAGAGGCAATaGAAGAGTTGTGCGCCTCTGCTCACTATTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RALCTSSGLERQ*KSCAPLLTILQ Trigger: CTGCAGAATAGTGAGCAGAGGCGCACAACTCTTGCATTGCCTCTCAAGCCCAGAAGATGTGCACAGGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CAA 72 bp | TCCCTTCAGAATCTGCGGCCGATGGCAGACGATTTTTaGACAGGCAGGAGGGTGTGGTCTCCAAACACCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLQNLRPMADDF*TGRRVWSPNTY Trigger: GTAGGTGTTTGGAGACCACACCCTCCTGCCTGTCAAAAAATCGTCTGCCATCGGCCGCAGATTCTGAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS CAA 90 bp | GAGCCAAACGTGTACAGGTCATCATCTCTCCCACTGTGCTTCCCATaGCTGATGGGTGGAGGGGGCTCACACGTGGCAATTACACATTCT | + |
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Preference number: 6 (lower is better) Translates to: EPNVYRSSSLPLCFP*LMGGGGSHVAITHS Trigger: AGAATGTGTAATTGCCACGTGTGAGCCCCCTCCACCCATCAGCAATGGGAAGCACAGTGGGAGAGATGATGACCTGTACACGTTTGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS CAA 90 bp | GGCCAAGTATCCCTTCAGAATCTGCGGCCGATGGCAGACGATTTTTaGACAGGCAGGAGGGTGTGGTCTCCAAACACCTACTGTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GQVSLQNLRPMADDF*TGRRVWSPNTYCPV Trigger: AACAGGACAGTAGGTGTTTGGAGACCACACCCTCCTGCCTGTCAAAAAATCGTCTGCCATCGGCCGCAGATTCTGAAGGGATACTTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS GCA 72 bp | GGCAATGCAAGAGTTGTGCGCCTCTGCTCACTATTCTaGAGTCTTCTAGGACCTCCATCTGACAGCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GNARVVRLCSLF*SLLGPPSDSWV Trigger: TACCCAGCTGTCAGATGGAGGTCCTAGAAGACTGCAGAATAGTGAGCAGAGGCGCACAACTCTTGCATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CCA 72 bp | GGGTGGAGGGGGCTCACACGTGGCAATTACACATTCTaGGAGAGAATCACTCCAGTCAACTCCTTTACCTTG | + |
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Preference number: 6 (lower is better) Translates to: GWRGLTRGNYTF*ERITPVNSFTL Trigger: CAAGGTAAAGGAGTTGACTGGAGTGATTCTCTCCCAGAATGTGTAATTGCCACGTGTGAGCCCCCTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039862.11 |
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| CDS TCA 72 bp | TGGTATTGCGGGGTCCCACTTTCCATCTGCTTGACATaGACTCCTTCCATCCGTAGACATAGGGTAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: WYCGVPLSICLT*TPSIRRHRVRA Trigger: GGCTCTTACCCTATGTCTACGGATGGAAGGAGTTCATGTCAAGCAGATGGAAAGTGGGACCCCGCAATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS GCA 72 bp | ATCTCTAGAAACAGCTTGTACACCTTCAGGGCCCTGTaGACATCTTCTGGGCTTGAGAGGCAATGCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: ISRNSLYTFRAL*TSSGLERQCKS Trigger: ACTCTTGCATTGCCTCTCAAGCCCAGAAGATGTGCACAGGGCCCTGAAGGTGTACAAGCTGTTTCTAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CCA 72 bp | CTATTCTGCAGTCTTCTAGGACCTCCATCTGACAGCTaGGTACCTCAGGGTACCACGTTCTGTTTGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: LFCSLLGPPSDS*VPQGTTFCLNK Trigger: TTTGTTCAAACAGAACGTGGTACCCTGAGGTACCCAGCTGTCAGATGGAGGTCCTAGAAGACTGCAGAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CCA 72 bp | AATCTGCGGCCGATGGCAGACGATTTTTACACATTCTaGGAGAGAATCACTCCAGTCAACTCCTTTACCTTG | + |
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Preference number: 6 (lower is better) Translates to: NLRPMADDFYTF*ERITPVNSFTL Trigger: CAAGGTAAAGGAGTTGACTGGAGTGATTCTCTCCCAGAATGTGTAAAAATCGTCTGCCATCGGCCGCAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 72 bp | GGAACAGAGTTGAATGAGAGGTTCTCCACAGCTCAATaGAGGACCAGGTTATCATTCTCCCTTTTCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GTELNERFSTAQ*RTRLSFSLFCG Trigger: TCCACAGAAAAGGGAGAATGATAACCTGGTCCTTCATTGAGCTGTGGAGAACCTCTCATTCAACTCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128128.8 |
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| CDS TCA 72 bp | TGTTTGTCACATTGGTTTCTGATATGTTTGGGAAGGTaGAAAGAGCAAGACGGTTTTGCAGGCCTGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CLSHWFLICLGR*KEQDGFAGLSL Trigger: CAGACTCAGGCCTGCAAAACCGTCTTGCTCTTTTCACCTTCCCAAACATATCAGAAACCAATGTGACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS GCA 72 bp | TTCCTGACAAGTCACAGTCTGGGGATCGTTAAGACTTaGTCGATAACCAGGCTTGCACTGGTATTTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: FLTSHSLGIVKT*SITRLALVFQF Trigger: AAATTGAAATACCAGTGCAAGCCTGGTTATCGAGCAAGTCTTAACGATCCCCAGACTGTGACTTGTCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS CAA 72 bp | AGGTATATTTCAGGACAGTTCCAGATGGGAAGGTTGTaGACTCATACAACTGGTTGGTTGGAGAAGCAAACG | + |
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Preference number: 6 (lower is better) Translates to: RYISGQFQMGRL*THTTGWLEKQT Trigger: CGTTTGCTTCTCCAACCAACCAGTTGTATGAGTCAACAACCTTCCCATCTGGAACTGTCCTGAAATATACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 72 bp | TCACATCCATTAGTAGATGACCAAGTCAGATTTTCCTaGCAAGTCACAGTCTGGGGATCGTTAAGACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SHPLVDDQVRFS*QVTVWGSLRLA Trigger: AGCAAGTCTTAACGATCCCCAGACTGTGACTTGTCAGGAAAATCTGACTTGGTCATCTACTAATGGATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 72 bp | TGGGTACCTCAGGGTACCACGTTCTGTTTGAACAAATaGTGTTTGGTGAACCAACTATGGTATATCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WVPQGTTFCLNK*CLVNQLWYIQD Trigger: ATCCTGGATATACCATAGTTGGTTCACCAAACATCATTTGTTCAAACAGAACGTGGTACCCTGAGGTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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| CDS TCA 72 bp | TTGCAAAGTCTAAATGACCTATTAATTTTCATAGACTaGGGTTTCCTGTGTAACTGTATCCACTTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LQSLNDLLIFID*GFLCNCIHFSF Trigger: GAAAGAGAAGTGGATACAGTTACACAGGAAACCTCAGTCTATGAAAATTAATAGGTCATTTAGACTTTGCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039862.11 ENSMUST00000128128.8 ENSMUST00000142416.2 |
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