RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000004948

Ensembl transcript IDs: ENSMUST00000005073.13, ENSMUST00000131563.2

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCAGGTaGCTTCCAGTCTGGACTTCTGCCTGGAGGTGGGCTACCTCTCCC +
Preference number: 1 (lower is better)
Translates to: EGVATQWSTNSCSGR*LPVWTSAWRWATSP
Trigger: GGGAGAGGTAGCCCACCTCCAGGCAGAAGTCCAGACTGGAAGCCACCTGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR CCA 90 bp GGGGAGGAGTTCGGGTCTGGCAAAGGTGAAGGCGTGGCCACGCAGTaGTCCACAAACAGCTGCAGCGGCAGGTGGCTTCCAGTCTGGACT +
Preference number: 1 (lower is better)
Translates to: GEEFGSGKGEGVATQ*STNSCSGRWLPVWT
Trigger: AGTCCAGACTGGAAGCCACCTGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACTCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR TCA 90 bp GTCCACGATGAAGTGATAGGGGGAGGAGTTCGGGTCTGGCAAAGGTaGAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCAG +
Preference number: 1 (lower is better)
Translates to: VHDEVIGGGVRVWQR*RRGHAVVHKQLQRQ
Trigger: CTGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACTCCTCCCCCTATCACTTCATCGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR-3UTR GCA 90 bp CTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCATCCAGTCTGGACTTCTaGCTGGAGGTGGGCTACCTC +
Preference number: 2 (lower is better)
Translates to: LAKVKAWPRSGPQTAAAASSLDF*LEVGYL
Trigger: GAGGTAGCCCACCTCCAGGCAGAAGTCCAGACTGGA...TGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR-3UTR CCA 90 bp CTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCAGCTACCTCTCCCAGGTaGAAGGTGGGAGCCGATTTC +
Preference number: 2 (lower is better)
Translates to: LAKVKAWPRSGPQTAAAAATSPR*KVGADF
Trigger: GAAATCGGCTCCCACCTTCCACCTGGGAGAGGTAGC...TGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR CCA 72 bp AGGGGGAGGAGTTCGGGTCTGGCAAAGGTGAAGGCGTaGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCA +
Preference number: 3 (lower is better)
Translates to: RGRSSGLAKVKA*PRSGPQTAAAA
Trigger: TGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACTCCTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
3UTR TCA 72 bp GAAGTGATAGGGGGAGGAGTTCGGGTCTGGCAAAGGTaGAGGCGTGGCCACGCAGTGGTCCACAAACAGCTG +
Preference number: 3 (lower is better)
Translates to: EVIGGGVRVWQR*RRGHAVVHKQL
Trigger: CAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACTCCTCCCCCTATCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
CDS-3UTR GCA 90 bp AGTTCGGGTCTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGTGAGGTCCCCGGGCTaGACCAGCTTCCCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSGLAKVKAWPRSGPQTAVRSPG*TSFPVP
Trigger: TGGCACGGGGAAGCTGGTGCAGCCCGGGGACCTCAC...AGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
CDS-3UTR CCA 90 bp GGGGAGGAGTTCGGGTCTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAACAGGGCGAGGGTCGTaGAGTAGGAAGGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GEEFGSGKGEGVATQWSTTGRGS*SRKVLY
Trigger: GTACAGCACCTTCCTACTCCACGACCCTCGCCCTGT...TGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
CDS-3UTR GCA 90 bp CTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTGCAGCGGCACGTGGAGTAGGAAGGTaGTGTACACCAGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LAKVKAWPRSGPQTAAAARGVGR*CTPGHL
Trigger: AAGATGCCCTGGTGTACAGCACCTTCCTACTCCACG...TGCCGCTGCAGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
CDS-3UTR CCA 90 bp AGTTCGGGTCTGGCAAAGGTGAAGGCGTGGCCACGCAGTGGTCCACAAACAGCTAGTATTCCAGTTCTCTaGGGTATCGGCACTCAATGG +
Preference number: 4 (lower is better)
Translates to: SSGLAKVKAWPRSGPQTASIPVL*GIGTQW
Trigger: CCATTGAGTGCCGATACCCCAGAGAACTGGAATACT...AGCTGTTTGTGGACCACTGCGTGGCCACGCCTTCACCTTTGCCAGACCCGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131563.2
CDS TCA 90 bp TGGGCGTTGAACCTGACCACGTCGGTATCCACGGACACCCGGGGCTaGCAACCCTCTGAGCCAAGGGTGAGGTCCCCGGGCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: WALNLTTSVSTDTRG*QPSEPRVRSPGCTS
Trigger: GCTGGTGCAGCCCGGGGACCTCACCCTTGGCTCAGAGGGTTGTCAGCCCCGGGTGTCCGTGGATACCGACGTGGTCAGGTTCAACGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS GCA 90 bp GGATGGACAGGCCACTCACAGGGCGAGGGTCGTGGAGTAGGAAGGTaGTGTACACCAGGGCATCTTTCGTCATCTGCACCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GWTGHSQGEGRGVGR*CTPGHLSSSAPCCC
Trigger: GCAGCAGCAGGGTGCAGATGACGAAAGATGCCCTGGTGTACAGCACCTTCCTACTCCACGACCCTCGCCCTGTGAGTGGCCTGTCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS CCA 90 bp GAGGACACAGTGGCTCTGAAGGGAACCCAGGTGGGCTGGATAGGGTaGCTGCTCACATTGCCCTGCCTGGGGTATCGGCACTCAATGGGT +
Preference number: 5 (lower is better)
Translates to: EDTVALKGTQVGWIG*LLTLPCLGYRHSMG
Trigger: ACCCATTGAGTGCCGATACCCCAGGCAGGGCAATGTGAGCAGCCACCCTATCCAGCCCACCTGGGTTCCCTTCAGAGCCACTGTGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 90 bp TTCTCCTCTGAGGACACAGTGGCTCTGAAGGGAACCCAGGTGGGCTaGATAGGGTGGCTGCTCACATTGCCCTGCCTGGGGTATCGGCAC +
Preference number: 5 (lower is better)
Translates to: FSSEDTVALKGTQVG*IGWLLTLPCLGYRH
Trigger: GTGCCGATACCCCAGGCAGGGCAATGTGAGCAGCCACCCTATCCAGCCCACCTGGGTTCCCTTCAGAGCCACTGTGTCCTCAGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS GCA 90 bp AAGGGAACCCAGGTGGGCTGGATAGGGTGGCTGCTCACATTGCCCTaGCTGGGGTATCGGCACTCAATGGGTACCTCCACACGGTTAGTC +
Preference number: 5 (lower is better)
Translates to: KGTQVGWIGWLLTLP*LGYRHSMGTSTRLV
Trigger: GACTAACCGTGTGGAGGTACCCATTGAGTGCCGATACCCCAGGCAGGGCAATGTGAGCAGCCACCCTATCCAGCCCACCTGGGTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 90 bp CGGTTAGTCCTGAGGATGGACAGGCCACTCACAGGGCGAGGGTCGTaGAGTAGGAAGGTGCTGTACACCAGGGCATCTTTCGTCATCTGC +
Preference number: 5 (lower is better)
Translates to: RLVLRMDRPLTGRGS*SRKVLYTRASFVIC
Trigger: GCAGATGACGAAAGATGCCCTGGTGTACAGCACCTTCCTACTCCACGACCCTCGCCCTGTGAGTGGCCTGTCCATCCTCAGGACTAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS TCA 90 bp CCAGTTCTCCTCCATCAGGCGAAGAGAGAAAGCCAGTTTCTCCTCTaGGGACACAGTGGCTCTGAAGGGAACCCAGGTGGGCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: PVLLHQAKRESQFLL*GHSGSEGNPGGLDR
Trigger: CCTATCCAGCCCACCTGGGTTCCCTTCAGAGCCACTGTGTCCTCAGAGGAGAAACTGGCTTTCTCTCTTCGCCTGATGGAGGAGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS TCA 90 bp AGGAATGCCACTGTGGCCAGGCCTAACCCAAGAGCCACAGAGGTTTaGGCAGAAGCAGTCCAGCCTTCCACAGTCTGGTCGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: RNATVARPNPRATEV*AEAVQPSTVWSLAF
Trigger: AAAGGCCAACGACCAGACTGTGGAAGGCTGGACTGCTTCTGCTCAAACCTCTGTGGCTCTTGGGTTAGGCCTGGCCACAGTGGCATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS TCA 90 bp CAGTCTGGTCGTTGGCCTTTCCAAGGAATATCAGGGGCCCTACAGTaGCATCAGCTTCATCGGTCACGTGCCTGCGGTTTCGAGAAACTA +
Preference number: 5 (lower is better)
Translates to: QSGRWPFQGISGALQ*HQLHRSRACGFEKL
Trigger: TAGTTTCTCGAAACCGCAGGCACGTGACCGATGAAGCTGATGTCACTGTAGGGCCCCTGATATTCCTTGGAAAGGCCAACGACCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 72 bp GAGGACACAGTGGCTCTGAAGGGAACCCAGGTGGGCTaGATAGGGTGGCTGCTCACATTGCCCTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: EDTVALKGTQVG*IGWLLTLPCLG
Trigger: CCCCAGGCAGGGCAATGTGAGCAGCCACCCTATCCAGCCCACCTGGGTTCCCTTCAGAGCCACTGTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS GCA 72 bp GGCCACTCACAGGGCGAGGGTCGTGGAGTAGGAAGGTaGTGTACACCAGGGCATCTTTCGTCATCTGCACCC +
Preference number: 6 (lower is better)
Translates to: GHSQGEGRGVGR*CTPGHLSSSAP
Trigger: GGGTGCAGATGACGAAAGATGCCCTGGTGTACAGCACCTTCCTACTCCACGACCCTCGCCCTGTGAGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS GCA 72 bp CAGGTGGGCTGGATAGGGTGGCTGCTCACATTGCCCTaGCTGGGGTATCGGCACTCAATGGGTACCTCCACA +
Preference number: 6 (lower is better)
Translates to: QVGWIGWLLTLP*LGYRHSMGTST
Trigger: TGTGGAGGTACCCATTGAGTGCCGATACCCCAGGCAGGGCAATGTGAGCAGCCACCCTATCCAGCCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 72 bp CTGAGGATGGACAGGCCACTCACAGGGCGAGGGTCGTaGAGTAGGAAGGTGCTGTACACCAGGGCATCTTTC +
Preference number: 6 (lower is better)
Translates to: LRMDRPLTGRGS*SRKVLYTRASF
Trigger: GAAAGATGCCCTGGTGTACAGCACCTTCCTACTCCACGACCCTCGCCCTGTGAGTGGCCTGTCCATCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS CCA 72 bp CTGCCTGGAGGTGGGCTACCTCTCCCAGGTGGAAGGTaGGAGCCGATTTCTCAGTATTCCAGTTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LPGGGLPLPGGR*EPISQYSSSPP
Trigger: TGGAGGAGAACTGGAATACTGAGAAATCGGCTCCCACCTTCCACCTGGGAGAGGTAGCCCACCTCCAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS TCA 72 bp CTCCATCAGGCGAAGAGAGAAAGCCAGTTTCTCCTCTaGGGACACAGTGGCTCTGAAGGGAACCCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: LHQAKRESQFLL*GHSGSEGNPGG
Trigger: CCCACCTGGGTTCCCTTCAGAGCCACTGTGTCCTCAGAGGAGAAACTGGCTTTCTCTCTTCGCCTGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS TCA 72 bp CGTTGGCCTTTCCAAGGAATATCAGGGGCCCTACAGTaGCATCAGCTTCATCGGTCACGTGCCTGCGGTTTC +
Preference number: 6 (lower is better)
Translates to: RWPFQGISGALQ*HQLHRSRACGF
Trigger: GAAACCGCAGGCACGTGACCGATGAAGCTGATGTCACTGTAGGGCCCCTGATATTCCTTGGAAAGGCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 72 bp ACGTGCCTGCGGTTTCGAGAAACTAGCTTGGACCACTaGCGGGGTCCATGGATCTGGAACTGTGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: TCLRFRETSLDH*RGPWIWNCEEL
Trigger: AAGCTCTTCACAGTTCCAGATCCATGGACCCCGCCAGTGGTCCAAGCTAGTTTCTCGAAACCGCAGGCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS TCA 72 bp GCTGCACCAGCTTCCCCGTGCCAAAAAGGTCTCTACTaGCAGTCACCACTAGTTCAGCTTCCAGACACTCCA +
Preference number: 6 (lower is better)
Translates to: AAPASPCQKGLY*QSPLVQLPDTP
Trigger: TGGAGTGTCTGGAAGCTGAACTAGTGGTGACTGTCAGTAGAGACCTTTTTGGCACGGGGAAGCTGGTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000005073.13
ENSMUST00000131563.2
CDS CAA 72 bp AACCAACTCTGGGAAGTCTTGTTGAACGAACAGGCTTaGTTGAGCTTATCGGGGATCTGGTTAGCTGGCGCG +
Preference number: 6 (lower is better)
Translates to: NQLWEVLLNEQA*LSLSGIWLAGA
Trigger: CGCGCCAGCTAACCAGATCCCCGATAAGCTCAACAAAGCCTGTTCGTTCAACAAGACTTCCCAGAGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CAA 72 bp ACTGGCGGGGTCCATGGATCTGGAACTGTGAAGAGCTaGAATTACTACAGTTGCCATGGCTGCAGCAATCAC +
Preference number: 6 (lower is better)
Translates to: TGGVHGSGTVKS*NYYSCHGCSNH
Trigger: GTGATTGCTGCAGCCATGGCAACTGTAGTAATTCAAGCTCTTCACAGTTCCAGATCCATGGACCCCGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CAA 90 bp TCTACTGGCAACCAACTCTGGGAAGTCTTGTTGAACGAACAGGCTTaGTTGAGCTTATCGGGGATCTGGTTAGCTGGCGCGACTTTGAGA +
Preference number: 6 (lower is better)
Translates to: STGNQLWEVLLNEQA*LSLSGIWLAGATLR
Trigger: TCTCAAAGTCGCGCCAGCTAACCAGATCCCCGATAAGCTCAACAAAGCCTGTTCGTTCAACAAGACTTCCCAGAGTTGGTTGCCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 72 bp GCTGCAGCAATCACAGATGTCAGCATCACCCTCTACTaGCAACCAACTCTGGGAAGTCTTGTTGAACGAACA +
Preference number: 6 (lower is better)
Translates to: AAAITDVSITLY*QPTLGSLVERT
Trigger: TGTTCGTTCAACAAGACTTCCCAGAGTTGGTTGCCAGTAGAGGGTGATGCTGACATCTGTGATTGCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CCA 72 bp GAAACTAGCTTGGACCACTGGCGGGGTCCATGGATCTaGAACTGTGAAGAGCTTGAATTACTACAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: ETSLDHWRGPWI*NCEELELLQLP
Trigger: TGGCAACTGTAGTAATTCAAGCTCTTCACAGTTCCAGATCCATGGACCCCGCCAGTGGTCCAAGCTAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS GCA 72 bp ACTGTGAAGAGCTTGAATTACTACAGTTGCCATGGCTaGAGCAATCACAGATGTCAGCATCACCCTCTACTG +
Preference number: 6 (lower is better)
Translates to: TVKSLNYYSCHG*SNHRCQHHPLL
Trigger: CAGTAGAGGGTGATGCTGACATCTGTGATTGCTGCAGCCATGGCAACTGTAGTAATTCAAGCTCTTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13
CDS CAA 72 bp TGGATCTGGAACTGTGAAGAGCTTGAATTACTACAGTaGCCATGGCTGCAGCAATCACAGATGTCAGCATCA +
Preference number: 6 (lower is better)
Translates to: WIWNCEELELLQ*PWLQQSQMSAS
Trigger: TGATGCTGACATCTGTGATTGCTGCAGCCATGGCAACTGTAGTAATTCAAGCTCTTCACAGTTCCAGATCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005073.13