Pregenerated sensors for ZNRF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058446Ensembl transcript IDs: ENSMUST00000079869.13, ENSMUST00000127331.2, ENSMUST00000148425.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGCCGTGCCACGCAGCCGTGAGCTCTCGCACACCACAGGAGCTTaGAGGCAGCACAGAAGACTGCTGGAGGACAGTGTGACAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: TAVPRSRELSHTTGA*RQHRRLLEDSVTEG Trigger: CCCTTCTGTCACACTGTCCTCCAGCAGTCTTCTGTGCTGCCTCCAAGCTCCTGTGGTGTGCGAGAGCTCACGGCTGCGTGGCACGGCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | AGCAGGTGCTCCTGCCCATGCCCTTGTGAGCACCATAGCAGCAGGTaGTCATGCCCTGTGAGCAGGGAGAGGTACAAGCAACAGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRCSCPCPCEHHSSR*SCPVSRERYKQQSW Trigger: CCAGCTCTGTTGCTTGTACCTCTCCCTGCTCACAGGGCATGAGCACCTGCTGCTATGGTGCTCACAAGGGCATGGGCAGGAGCACCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 90 bp | CAGAAGACTGCTGGAGGACAGTGTGACAGAAGGGGGAACTCAGGCTaGGACACCAACAAGTTGAGCTTAGCAGGTCATCTTCCCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QKTAGGQCDRRGNSG*DTNKLSLAGHLPRE Trigger: CTCCCTGGGAAGATGACCTGCTAAGCTCAACTTGTTGGTGTCTCAGCCTGAGTTCCCCCTTCTGTCACACTGTCCTCCAGCAGTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 90 bp | AATGGCGAAGTGCAGCAGAGACCTGCAGCCAGCACACAGTGCTTGTaGCAACAGCACCCTTTGCCTCTGAGTCACTCTGTATGCTCCGAT | + |
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Preference number: 1 (lower is better) Translates to: NGEVQQRPAASTQCL*QQHPLPLSHSVCSD Trigger: ATCGGAGCATACAGAGTGACTCAGAGGCAAAGGGTGCTGTTGTCACAAGCACTGTGTGCTGGCTGCAGGTCTCTGCTGCACTTCGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 90 bp | ACTTGTCTCAAACTCACTGAGTACCCCAAGCTGGTTTCAAACCCATaGTCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAG | + |
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Preference number: 1 (lower is better) Translates to: TCLKLTEYPKLVSNP*SSASASTSRVLGYQ Trigger: CTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATCATGGGTTTGAAACCAGCTTGGGGTACTCAGTGAGTTTGAGACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | ACCTATACACTCCAGCACTCACCAAGGCTGTACCCCCGTGGCTGCTaGTGTCATGTAGACAAGCCGAGTAGAGACCACCACTTAAATCTT | + |
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Preference number: 1 (lower is better) Translates to: TYTLQHSPRLYPRGC*CHVDKPSRDHHLNL Trigger: AAGATTTAAGTGGTGGTCTCTACTCGGCTTGTCTACATGACAGCAGCAGCCACGGGGGTACAGCCTTGGTGAGTGCTGGAGTGTATAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | CAAACCTATACACTCCAGCACTCACCAAGGCTGTACCCCCGTGGCTaGTGCTGTCATGTAGACAAGCCGAGTAGAGACCACCACTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: QTYTLQHSPRLYPRG*CCHVDKPSRDHHLN Trigger: ATTTAAGTGGTGGTCTCTACTCGGCTTGTCTACATGACAGCAGCAGCCACGGGGGTACAGCCTTGGTGAGTGCTGGAGTGTATAGGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR CCA 90 bp | TCTTCCTGTCCTTCTCTGGACCCAAGTGTCCCAGAACTCAGATCCTaGCTGAATAAGCCTGCAGCTCTCATTTTCTTCCAGAGACAGATC | + |
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Preference number: 1 (lower is better) Translates to: SSCPSLDPSVPELRS*LNKPAALIFFQRQI Trigger: GATCTGTCTCTGGAAGAAAATGAGAGCTGCAGGCTTATTCAGCCAGGATCTGAGTTCTGGGACACTTGGGTCCAGAGAAGGACAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR CCA 90 bp | AGCGGAAAGGGCAAAGTGGGTATTCACATTCTAAGAGCTCATCCCTaGGGAAAGTCAGGGGGAGAGCAAAGCTTACGAACTGAAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: SGKGKVGIHILRAHP*GKSGGEQSLRTERT Trigger: TGTTCTTTCAGTTCGTAAGCTTTGCTCTCCCCCTGACTTTCCCCAGGGATGAGCTCTTAGAATGTGAATACCCACTTTGCCCTTTCCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | GTACAGGCTGTGCAGCATTTTCAAAATCCCTGTGTGTCCCTTATATaGAAGTTTGGTTCGCTGAGTTCTGTGGTTCTTCCTGTCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: VQAVQHFQNPCVSLI*KFGSLSSVVLPVLL Trigger: GAGAAGGACAGGAAGAACCACAGAACTCAGCGAACCAAACTTGCATATAAGGGACACACAGGGATTTTGAAAATGCTGCACAGCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 90 bp | TTCGTGGAGATGTTAGTTCATGCCACACTGCTCTTTGCTTCTCTATaGAAACACACACACACTCACATACACACACACACACTCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: FVEMLVHATLLFASL*KHTHTHIHTHTLTV Trigger: GACTGTGAGTGTGTGTGTGTGTATGTGAGTGTGTGTGTGTTTTCATAGAGAAGCAAAGAGCAGTGTGGCATGAACTAACATCTCCACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | TTTCCTGAGTGTTGGCATGAATCACCGTGTCCAGTAGGAAATGAGTaGTCTGAAACCTCACCACACTCATACTTAGAAACACAGTATGAA | + |
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Preference number: 1 (lower is better) Translates to: FPECWHESPCPVGNE*SETSPHSYLETQYE Trigger: TTCATACTGTGTTTCTAAGTATGAGTGTGGTGAGGTTTCAGAGCACTCATTTCCTACTGGACACGGTGATTCATGCCAACACTCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 90 bp | TGGGCAGACAGTGATAAGAGAACTGTTACTTTTGATGTCCAATCTTaGGATTCTCAGGACCCAGGATCAAAGCTAAGAAACACACACATT | + |
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Preference number: 1 (lower is better) Translates to: WADSDKRTVTFDVQS*DSQDPGSKLRNTHI Trigger: AATGTGTGTGTTTCTTAGCTTTGATCCTGGGTCCTGAGAATCTCAAGATTGGACATCAAAAGTAACAGTTCTCTTATCACTGTCTGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 90 bp | TCCTCATTATACGTTATTCTTGGCTTTGTTAAACACATCACAAGATaGAAATCCATTTCATCTGAGGGTACAAATTTTGAGCATACCGGG | + |
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Preference number: 1 (lower is better) Translates to: SSLYVILGFVKHITR*KSISSEGTNFEHTG Trigger: CCCGGTATGCTCAAAATTTGTACCCTCAGATGAAATGGATTTGCATCTTGTGATGTGTTTAACAAAGCCAAGAATAACGTATAATGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148425.2 |
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| 3UTR CCA 90 bp | GTATATTATGTCAACTCTAACATATTAGATCAGAAATGGCAGGCATaGGCAGACAGTGATAAGAGAACTGTTACTTTTGATGTCCAATCT | + |
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Preference number: 1 (lower is better) Translates to: VYYVNSNILDQKWQA*ADSDKRTVTFDVQS Trigger: AGATTGGACATCAAAAGTAACAGTTCTCTTATCACTGTCTGCCCATGCCTGCCATTTCTGATCTAATATGTTAGAGTTGACATAATATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCCCACCCGACCCCACCATAGCAGCAGGTGCTCCTGCCCATGCCCTTGTGAAGTTGCATAGCTGCTaGAAGATGGTCACTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: QSPPDPTIAAGAPAHALVKLHSC*KMVTAN Trigger: GTTAGCAGTGACCATCTTGCAGCAGCTATGCAACTT...CACAAGGGCATGGGCAGGAGCACCTGCTGCTATGGTGGGGTCGGGTGGGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAAGAAGAGAAGGCAGCAGAAGTGAGTCTTTCCAGACAATACACCAGCGGAGCAGCAGGTGCTCCTaGCCATGCCCTTGTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TPRREGSRSESFQTIHQRSSRCS*PCPCEH Trigger: GTGCTCACAAGGGCATGGGCAGGAGCACCTGCTGCT...CCGCTGGTGTATTGTCTGGAAAGACTCACTTCTGCTGCCTTCTCTTCTTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | GATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTGCACAAAGAAAAATGGCGAAGTaGAGCAGAGACCTGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DPLPLPQHLGCWDTRSAQRKMAK*SRDLQP Trigger: TGGCTGCAGGTCTCTGCTGCACTTCGCCATTTTTCT...TTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | GATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTGCACAACCAGAACTCAGATCCTaGCTGAATAAGCCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPLPLPQHLGCWDTRSAQPELRS*LNKPAA Trigger: AGCTGCAGGCTTATTCAGCCAGGATCTGAGTTCTGG...TTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCTTGCCTCCGTTTCCTGAGTGTTGGCATGAATCACCGTGTCCAGTAGGACACACCACAGGAGCTTaGAGGCAGCACAGAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: ILLPPFPECWHESPCPVGHTTGA*RQHRRL Trigger: CAGTCTTCTGTGCTGCCTCCAAGCTCCTGTGGTGTG...TCCTACTGGACACGGTGATTCATGCCAACACTCAGGAAACGGAGGCAAGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGGAACTCAGGCTGAGACACCAACAAGTTGAGCTTAGCAGGTCATCTTCCCTTCCTGTCCTTCTCTaGACCCAAGTGTCCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KGELRLRHQQVELSRSSSLPVLL*TQVSQN Trigger: GTTCTGGGACACTTGGGTCCAGAGAAGGACAGGAAG...GGAAGATGACCTGCTAAGCTCAACTTGTTGGTGTCTCAGCCTGAGTTCCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR TCA 90 bp | TGGATCATGTTGTCCATACACAGTGTGGCTATCAGTCAGGTGGCAAATTCAACCCTGTGCTGGCAGCTGTaGCACAGGATCAGACCACTG | + |
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Preference number: 2 (lower is better) Translates to: WIMLSIHSVAISQVANSTLCWQL*HRIRPL Trigger: CAGTGGTCTGATCCTGTGTCACAGCTGCCAGCACAG...GGTTGAATTTGCCACCTGACTGATAGCCACACTGTGTATGGACAACATGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | TGGATCATGTTGTCCATACACAGTGTGGCTATCAGTCAGGTGGCAAATTCAACCAGGTGCTCCTGCCCATaGCCTTGTGAGCACCATAGC | + |
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Preference number: 2 (lower is better) Translates to: WIMLSIHSVAISQVANSTRCSCP*PCEHHS Trigger: GCTATGGTGCTCACAAGGGCATGGGCAGGAGCACCT...GGTTGAATTTGCCACCTGACTGATAGCCACACTGTGTATGGACAACATGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTATATACTCTAGGAAAGGTAGGAGAATGGACTCCAAAGGACTGACATGCAGCAGCAGGTGCTCATaGCCTGTGAGCAGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EVIYSRKGRRMDSKGLTCSSRCS*PVSRER Trigger: CCTCTCCCTGCTCACAGGGCATGAGCACCTGCTGCT...GCATGTCAGTCCTTTGGAGTCCATTCTCCTACCTTTCCTAGAGTATATAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCTTGCCTCCGTTTCCTGAGTGTTGGCATGAATCACCGTGTCCAGTAGGAAGAAGGCAGCAGAAGTaGGTCTTTCCAGACAATACA | + |
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Preference number: 2 (lower is better) Translates to: ILLPPFPECWHESPCPVGRRQQK*VFPDNT Trigger: TGTATTGTCTGGAAAGACTCACTTCTGCTGCCTTCT...TCCTACTGGACACGGTGATTCATGCCAACACTCAGGAAACGGAGGCAAGAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR TCA 90 bp | GATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTGCACAAAAAATCTCTGTATACTaGATAACAAGGGATGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: DPLPLPQHLGCWDTRSAQKISVY*ITRDAP Trigger: CGGAGCATCCCTTGTTATTCAGTATACAGAGATTTT...TTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | GTGCATACTGCAGATATGCTAAGGATGGTTATTCTGGGCTGCAGTCTAGTATCTGGGGGAGGTGGGGCCTaGAAGTGGAAGAACTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: VHTADMLRMVILGCSLVSGGGGA*KWKNFN Trigger: ATTGAAGTTCTTCCACTTCCAGGCCCCACCTCCCCC...AGATACTAGACTGCAGCCCAGAATAACCATCCTTAGCATATCTGCAGTATGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCTTATCTGCAGAGTATTTACAAAGATTCCAGAAGGCTATGGCCAGCTGCTAAGAGCTCATCCCTaGGGAAAGTCAGGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CDLICRVFTKIPEGYGQLLRAHP*GKSGGE Trigger: CTCTCCCCCTGACTTTCCCCAGGGATGAGCTCTTAG...CAGCTGGCCATAGCCTTCTGGAATCTTTGTAAATACTCTGCAGATAAGGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | ACACAGTGTGGCTATCAGTCAGGTGGCAAATTCAACCAGTTCTCGAGTTTTAAGACCAGGCTGTCTGAGTaGACTTCAGGAACCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: TQCGYQSGGKFNQFSSFKTRLSE*TSGTTV Trigger: GACAGTGGTTCCTGAAGTCCACTCAGACAGCCTGGT...CTTAAAACTCGAGAACTGGTTGAATTTGCCACCTGACTGATAGCCACACTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR TCA 90 bp | GTAATTACAGAAAGACAAAAGACACCTGCTAGGACAGAGTCACTGTGGCCCCGGTTCAGAAACTGCAGTTaGGTAGACAGCTCTACATGT | + |
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Preference number: 2 (lower is better) Translates to: VITERQKTPARTESLWPRFRNCS*VDSSTC Trigger: ACATGTAGAGCTGTCTACTCAACTGCAGTTTCTGAA...CCGGGGCCACAGTGACTCTGTCCTAGCAGGTGTCTTTTGTCTTTCTGTAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | GATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTGCACAATCCAAAGGACTGACATaGTACAATATTAAAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: DPLPLPQHLGCWDTRSAQSKGLT*YNIKVK Trigger: CTTGACTTTAATATTGTAGCATGTCAGTCCTTTGGA...TTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | GTGCATACTGCAGATATGCTAAGGATGGTTATTCTGGGCTGCAGTCTAGTATCTCATCTACGCAGTGACTaGTACAGGCTGTGCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: VHTADMLRMVILGCSLVSHLRSD*YRLCSI Trigger: AATGCTGCACAGCCTGTACCAGTCACTGCGTAGATG...AGATACTAGACTGCAGCCCAGAATAACCATCCTTAGCATATCTGCAGTATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | TGGATCATGTTGTCCATACACAGTGTGGCTATCAGTCAGGTGGCAAATTCAACCATGGTTATTCTGGGCTaGAGTCTAGTATCTAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: WIMLSIHSVAISQVANSTMVILG*SLVSKW Trigger: CCACTTAGATACTAGACTGCAGCCCAGAATAACCAT...GGTTGAATTTGCCACCTGACTGATAGCCACACTGTGTATGGACAACATGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | ACACAGTGTGGCTATCAGTCAGGTGGCAAATTCAACCAGTTCTCGAGTTTTAAGGGTGGGGCCTGGAAGTaGAAGAACTTCAATTATACT | + |
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Preference number: 2 (lower is better) Translates to: TQCGYQSGGKFNQFSSFKGGAWK*KNFNYT Trigger: AGTATAATTGAAGTTCTTCCACTTCCAGGCCCCACC...CTTAAAACTCGAGAACTGGTTGAATTTGCCACCTGACTGATAGCCACACTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTATATACTCTAGGAAAGGTAGGAGAATGGACTCCAAAGGACTGACATGCAACAGGCGATCACAGTaGAACTGCAGAGGTACTATG | + |
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Preference number: 2 (lower is better) Translates to: EVIYSRKGRRMDSKGLTCNRRSQ*NCRGTM Trigger: CATAGTACCTCTGCAGTTCCACTGTGATCGCCTGTT...GCATGTCAGTCCTTTGGAGTCCATTCTCCTACCTTTCCTAGAGTATATAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTATATACTCTAGGAAAGGTAGGAGAATGGACTCCAAAGGACTGACATGCAAAGACATTCACTGTTaGAGCCCTGATAGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: EVIYSRKGRRMDSKGLTCKDIHC*SPDSSL Trigger: AAGAGAGCTATCAGGGCTGCAACAGTGAATGTCTTT...GCATGTCAGTCCTTTGGAGTCCATTCTCCTACCTTTCCTAGAGTATATAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTATATACTCTAGGAAAGGTAGGAGAATGGACTCCAAAGGACTGACATGCATAGCTGCTGCAAGATaGTCACTGCTAACAAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: EVIYSRKGRRMDSKGLTCIAAAR*SLLTSY Trigger: ATAGCTTGTTAGCAGTGACCATCTTGCAGCAGCTAT...GCATGTCAGTCCTTTGGAGTCCATTCTCCTACCTTTCCTAGAGTATATAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGATGGAGAAAGAACAGGGTAAAAGTGGTCAGGTAACTGGTTATATCACAATGCTACTCAATGTCTaGATACAGCCTGTTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: WGMEKEQGKSGQVTGYITMLLNV*IQPVKY Trigger: ATACTTAACAGGCTGTATGCAGACATTGAGTAGCAT...TGTGATATAACCAGTTACCTGACCACTTTTACCCTGTTCTTTCTCCATCCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR CAA 90 bp | TATACTGGCAAAGAGAGAATGAAAAGGTTTAAAGCAGGATCAACATaGACAATACATTCACATGGACAGAGTGGACTGCAGAAACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YTGKERMKRFKAGST*TIHSHGQSGLQKPK Trigger: CTTGGGTTTCTGCAGTCCACTCTGTCCATGTGAATGTATTGTCAATGTTGATCCTGCTTTAAACCTTTTCATTCTCTCTTTGCCAGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR CAA 90 bp | CCGTATCTTTACTCAGCACATCCTCATTATACGTTATTCTTGGCTTaGTTAAACACATCACAAGATGCAAATCCATTTCATCTGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: PYLYSAHPHYTLFLA*LNTSQDANPFHLRV Trigger: TACCCTCAGATGAAATGGATTTGCATCTTGTGATGTGTTTAACAAAGCCAAGAATAACGTATAATGAGGATGTGCTGAGTAAAGATACGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148425.2 |
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| 3UTR GCA 72 bp | ACCAGAGACTCCCCTTCCACACCCAGGGCAGGGCAGTaGAGCACAGCGCAGCACAGCAGGACAGCAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TRDSPSTPRAGQ*STAQHSRTAGL Trigger: CAGCCCTGCTGTCCTGCTGTGCTGCGCTGTGCTGCACTGCCCTGCCCTGGGTGTGGAAGGGGAGTCTCTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 72 bp | ACCCGACCCCACCATAGCAGCAGGTGCTCCTGCCCATaGCCTTGTGAGCACCATAGCAGCAGGTGCTCATGC | + |
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Preference number: 3 (lower is better) Translates to: TRPHHSSRCSCP*PCEHHSSRCSC Trigger: GCATGAGCACCTGCTGCTATGGTGCTCACAAGGGCATGGGCAGGAGCACCTGCTGCTATGGTGGGGTCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR CCA 72 bp | CCACGCAGCCGTGAGCTCTCGCACACCACAGGAGCTTaGAGGCAGCACAGAAGACTGCTGGAGGACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PRSRELSHTTGA*RQHRRLLEDSV Trigger: CACACTGTCCTCCAGCAGTCTTCTGTGCTGCCTCCAAGCTCCTGTGGTGTGCGAGAGCTCACGGCTGCGTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 72 bp | CTCCAGCACTCACCAAGGCTGTACCCCCGTGGCTGCTaGTGTCATGTAGACAAGCCGAGTAGAGACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: LQHSPRLYPRGC*CHVDKPSRDHH Trigger: GTGGTGGTCTCTACTCGGCTTGTCTACATGACAGCAGCAGCCACGGGGGTACAGCCTTGGTGAGTGCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 72 bp | TCCTGCCCATGCCCTTGTGAGCACCATAGCAGCAGGTaGTCATGCCCTGTGAGCAGGGAGAGGTACAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SCPCPCEHHSSR*SCPVSRERYKQ Trigger: TTGCTTGTACCTCTCCCTGCTCACAGGGCATGAGCACCTGCTGCTATGGTGCTCACAAGGGCATGGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 72 bp | CTTGGAGGCAGCACAGAAGACTGCTGGAGGACAGTGTaGCAGAAGGGGGAACTCAGGCTGAGACACCAACAA | + |
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Preference number: 3 (lower is better) Translates to: LGGSTEDCWRTV*QKGELRLRHQQ Trigger: TTGTTGGTGTCTCAGCCTGAGTTCCCCCTTCTGTCACACTGTCCTCCAGCAGTCTTCTGTGCTGCCTCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR TCA 72 bp | GTGCAGCAGAGACCTGCAGCCAGCACACAGTGCTTGTaGCAACAGCACCCTTTGCCTCTGAGTCACTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: VQQRPAASTQCL*QQHPLPLSHSV Trigger: TACAGAGTGACTCAGAGGCAAAGGGTGCTGTTGTCACAAGCACTGTGTGCTGGCTGCAGGTCTCTGCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
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| 3UTR GCA 72 bp | ACCCATGATCCTCTGCCTCTGCCTCAACATCTCGGGTaGTGGGATACCAGAAGTGCACAAGCTTGGCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: THDPLPLPQHLG*WDTRSAQAWLV Trigger: TACCAGCCAAGCTTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATCATGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | CCCCAAGCTGGTTTCAAACCCATGATCCTCTGCCTCTaGCTCAACATCTCGGGTGCTGGGATACCAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PQAGFKPMILCL*LNISGAGIPEV Trigger: CACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATCATGGGTTTGAAACCAGCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | GCTGGAGGACAGTGTGACAGAAGGGGGAACTCAGGCTaGGACACCAACAAGTTGAGCTTAGCAGGTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGGQCDRRGNSG*DTNKLSLAGHL Trigger: AAGATGACCTGCTAAGCTCAACTTGTTGGTGTCTCAGCCTGAGTTCCCCCTTCTGTCACACTGTCCTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | AAACTCACTGAGTACCCCAAGCTGGTTTCAAACCCATaGTCCTCTGCCTCTGCCTCAACATCTCGGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLTEYPKLVSNP*SSASASTSRVL Trigger: CAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATCATGGGTTTGAAACCAGCTTGGGGTACTCAGTGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | CATGATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTaGGATACCAGAAGTGCACAAGCTTGGCTGGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HDPLPLPQHLGC*DTRSAQAWLVK Trigger: TTTTACCAGCCAAGCTTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | CTCTGGACCCAAGTGTCCCAGAACTCAGATCCTGGCTaGATAAGCCTGCAGCTCTCATTTTCTTCCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LWTQVSQNSDPG*ISLQLSFSSRD Trigger: GTCTCTGGAAGAAAATGAGAGCTGCAGGCTTATTCAGCCAGGATCTGAGTTCTGGGACACTTGGGTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | TCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTaGACAAGCTTGGCTGGTAAAACAGTTCTGGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SASTSRVLGYQK*TSLAGKTVLVP Trigger: TGGTACCAGAACTGTTTTACCAGCCAAGCTTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | CTTGTGGCTATCCTCTTGCCTCCGTTTCCTGAGTGTTaGCATGAATCACCGTGTCCAGTAGGAAATGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVAILLPPFPEC*HESPCPVGNEC Trigger: GCACTCATTTCCTACTGGACACGGTGATTCATGCCAACACTCAGGAAACGGAGGCAAGAGGATAGCCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTCTGCCTCTGCCTCAACATCTCGGGTGCTGGGATACCAGAAGTGCACAAGTATGCTCCGATGATTaGTTTTGGTTTAGATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DPLPLPQHLGCWDTRSAQVCSDD*FWFRWS Trigger: GCTCCATCTAAACCAAAACAAATCATCGGAGCATAC...TTGTGCACTTCTGGTATCCCAGCACCCGAGATGTTGAGGCAGAGGCAGAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | GGCAAAGTGGGTATTCACATTCTAAGAGCTCATCCCTaGGGAAAGTCAGGGGGAGAGCAAAGCTTACGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GKVGIHILRAHP*GKSGGEQSLRT Trigger: AGTTCGTAAGCTTTGCTCTCCCCCTGACTTTCCCCAGGGATGAGCTCTTAGAATGTGAATACCCACTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | CATCTCGGGTGCTGGGATACCAGAAGTGCACAAGCTTaGCTGGTAAAACAGTTCTGGTACCATAGTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLGCWDTRSAQA*LVKQFWYHSYC Trigger: GCAGTAACTATGGTACCAGAACTGTTTTACCAGCCAAGCTTGTGCACTTCTGGTATCCCAGCACCCGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCTTGCCTCCGTTTCCTGAGTGTTGGCATGAATCACCGTGTCCAGTAGGATGGCAACTCAGTCAGTaGGAAATATATTTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLPPFPECWHESPCPVGWQLSQ*EIYFLC Trigger: GCACAGAAAATATATTTCCAACTGACTGAGTTGCCA...TCCTACTGGACACGGTGATTCATGCCAACACTCAGGAAACGGAGGCAAGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | CAAAGAAATCCATGTAACAAGTCATCTGCAAAGCCATaGAATGACCTGCTACTCAGTGCCATCAGGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: QRNPCNKSSAKP*NDLLLSAIRST Trigger: AGTGGACCTGATGGCACTGAGTAGCAGGTCATTGCATGGCTTTGCAGATGACTTGTTACATGGATTTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | AGTAAGCCATCTGGATCATGTTGTCCATACACAGTGTaGCTATCAGTCAGGTGGCAAATTCAACCAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SKPSGSCCPYTV*LSVRWQIQPVL Trigger: GAGAACTGGTTGAATTTGCCACCTGACTGATAGCCACACTGTGTATGGACAACATGATCCAGATGGCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | CAGACTAACCATGTAAGATTTAAGAATGCAGAAGTCTaGCCAGGAAAGCCCAAACCTATACACTCCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: QTNHVRFKNAEV*PGKPKPIHSST Trigger: AGTGCTGGAGTGTATAGGTTTGGGCTTTCCTGGGCAGACTTCTGCATTCTTAAATCTTACATGGTTAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | TGTTGGCATGAATCACCGTGTCCAGTAGGAAATGAGTaGTCTGAAACCTCACCACACTCATACTTAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: CWHESPCPVGNE*SETSPHSYLET Trigger: TGTTTCTAAGTATGAGTGTGGTGAGGTTTCAGAGCACTCATTTCCTACTGGACACGGTGATTCATGCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | AGGATCAACATTGACAATACATTCACATGGACAGAGTaGACTGCAGAAACCCAAGCACGTTCCTCATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RINIDNTFTWTE*TAETQARSSFS Trigger: AGAGAATGAGGAACGTGCTTGGGTTTCTGCAGTCCACTCTGTCCATGTGAATGTATTGTCAATGTTGATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | ATTAGTTGGGTACATTCTCGCCAACAATTTAATCAATaGTTTCAGGGGTACCCCAAGCAACAGCCATCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISWVHSRQQFNQ*FQGYPKQQPSK Trigger: TTTCGATGGCTGTTGCTTGGGGTACCCCTGAAATCATTGATTAAATTGTTGGCGAGAATGTACCCAACTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | ATGTTAGTTCATGCCACACTGCTCTTTGCTTCTCTATaGAAACACACACACACTCACATACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: MLVHATLLFASL*KHTHTHIHTHT Trigger: TGTGTGTGTGTGTATGTGAGTGTGTGTGTGTTTTCATAGAGAAGCAAAGAGCAGTGTGGCATGAACTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | TTTCGTGGAGATGTTAGTTCATGCCACACTGCTCTTTaGTTCTCTATGAAAACACACACACACTCACATACA | + |
|
Preference number: 3 (lower is better) Translates to: FRGDVSSCHTAL*FSMKTHTHSHT Trigger: TGTATGTGAGTGTGTGTGTGTTTTCATAGAGAAGCAAAGAGCAGTGTGGCATGAACTAACATCTCCACGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | AAGAGTTTCATACTTCGCTCATCTTTAGCTTCCTACTaGGGAACTCCCCTTATTTCCCTTAAGTCAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSFILRSSLASY*GTPLISLKSIQ Trigger: CTGTATTGACTTAAGGGAAATAAGGGGAGTTCCCCAGTAGGAAGCTAAAGATGAGCGAAGTATGAAACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | AGCAAAACTTTTCAAAGTTGCATAGCTGCTGCAAGATaGTCACTGCTAACAAGCTATTGCACAGTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SKTFQSCIAAAR*SLLTSYCTVSF Trigger: AAAGGAAACTGTGCAATAGCTTGTTAGCAGTGACCATCTTGCAGCAGCTATGCAACTTTGAAAAGTTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR TCA 72 bp | TTCCAGAAGGCTATGGCCAGCTGGATAACTGATAACTaGGGCTTTCAATTTTTATTTTGTCTCCATATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FQKAMASWITDN*GFQFLFCLHIQ Trigger: CTGAATATGGAGACAAAATAAAAATTGAAAGCCTCAGTTATCAGTTATCCAGCTGGCCATAGCCTTCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CCA 72 bp | GTCAACTCTAACATATTAGATCAGAAATGGCAGGCATaGGCAGACAGTGATAAGAGAACTGTTACTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VNSNILDQKWQA*ADSDKRTVTFD Trigger: ATCAAAAGTAACAGTTCTCTTATCACTGTCTGCCCATGCCTGCCATTTCTGATCTAATATGTTAGAGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR GCA 72 bp | TATAGTAGTCTTATATCTAGAAAACACTCGTACACGTaGACACACACGCACATACACACACACACAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: YSSLISRKHSYT*THTHIHTHTNK Trigger: TTTATTTGTGTGTGTGTGTATGTGCGTGTGTGTGCACGTGTACGAGTGTTTTCTAGATATAAGACTACTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| 3UTR TCA 72 bp | TATTCAGTAGTTTCAGCTGAATATTCTATAACTTTATaGTGGATGCTACTCAATGTCTGCATACAGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSVVSAEYSITL*WMLLNVCIQPV Trigger: AACAGGCTGTATGCAGACATTGAGTAGCATCCATCATAAAGTTATAGAATATTCAGCTGAAACTACTGAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CAA 72 bp | GTAGCCCAGGCCAGCCTGGACCTTGTGGCTATCCTCTaGCCTCCGTTTCCTGAGTGTTGGCATGAATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VAQASLDLVAIL*PPFPECWHESP Trigger: CGGTGATTCATGCCAACACTCAGGAAACGGAGGCAAGAGGATAGCCACAAGGTCCAGGCTGGCCTGGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR TCA 90 bp | TGGGGGATGGAGAAAGAACAGGGTAAAAGTGGTCAGGTAACTGGTTATATCACACAGCGCTGGGGATGCTaGAGGCCGACTGCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WGMEKEQGKSGQVTGYITQRWGC*RPTAPR Trigger: GCGCGGCGCAGTCGGCCTTCAGCATCCCCAGCGCTG...TGTGATATAACCAGTTACCTGACCACTTTTACCCTGTTCTTTCTCCATCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTTCGCTGAGTTCTGTGGTTCTTCCTGTCCTTCTCTGGACCCAAGTGTCCAGGCAAGGCAGCCGTaGTATGGTGTCCCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWFAEFCGSSCPSLDPSVQARQP*YGVPLL Trigger: CAGCAGGGGGACACCATAGCACGGCTGCCTTGCCTG...GACACTTGGGTCCAGAGAAGGACAGGAAGAACCACAGAACTCAGCGAACCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR GCA 90 bp | GTTTGGTTCGCTGAGTTCTGTGGTTCTTCCTGTCCTTCTCTGGACCCAAGTGTCTCCTCTGGGCTGCTGTaGACTGAGTCCTGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VWFAEFCGSSCPSLDPSVSSGLL*TESCEP Trigger: CGGCTCACAGGACTCAGTGCACAGCAGCCCAGAGGA...GACACTTGGGTCCAGAGAAGGACAGGAAGAACCACAGAACTCAGCGAACCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR TCA 90 bp | CAGTCCCCACCCGACCCCACCATAGCAGCAGGTGCTCCTGCCCATGCCCTTGTGCTGGACAAGATCTATTaGCTTCAAACCATTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSPPDPTIAAGAPAHALVLDKIY*LQTIHL Trigger: TAGATGAATGGTTTGAAGTCAATAGATCTTGTCCAG...CACAAGGGCATGGGCAGGAGCACCTGCTGCTATGGTGGGGTCGGGTGGGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR TCA 90 bp | AGCACATCCTCATTATACGTTATTCTTGGCTTTGTTAAACACATCACAAGATGCCAGCGCTGGGGATGCTaGAGGCCGACTGCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: STSSLYVILGFVKHITRCQRWGC*RPTAPR Trigger: GCGCGGCGCAGTCGGCCTTCAGCATCCCCAGCGCTG...GCATCTTGTGATGTGTTTAACAAAGCCAAGAATAACGTATAATGAGGATGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148425.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGGGAACTCAGGCTGAGACACCAACAAGTTGAGCTTAGCAGGTCATCTTCCGCTATGGTGTCCCCCTaGTGCAGTTCTTCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGELRLRHQQVELSRSSSAMVSP*CSSSRH Trigger: ATGCCTTGAAGAACTGCAGCAGGGGGACACCATAGC...GGAAGATGACCTGCTAAGCTCAACTTGTTGGTGTCTCAGCCTGAGTTCCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR GCA 90 bp | AAATCAATTAAAACAAGAAAGGGACAGTTACCCGTAACACAGGGGTCTGCTGTGCAGGCAAGGCAGCCGTaGTATGGTGTCCCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSIKTRKGQLPVTQGSAVQARQP*YGVPLL Trigger: CAGCAGGGGGACACCATAGCACGGCTGCCTTGCCTG...CACAGCAGACCCCTGTGTTACGGGTAACTGTCCCTTTCTTGTTTTAATTGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| CDS-3UTR GCA 90 bp | GCACATCCTCATTATACGTTATTCTTGGCTTTGTTAAACACATCACAAGATGCATCCTCTGGGCTGCTGTaGACTGAGTCCTGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHPHYTLFLALLNTSQDASSGLL*TESCEP Trigger: CGGCTCACAGGACTCAGTGCACAGCAGCCCAGAGGA...TGCATCTTGTGATGTGTTTAACAAAGCCAAGAATAACGTATAATGAGGATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148425.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAATTAAAACAAGAAAGGGACAGTTACCCGTAACACAGGGGTCTGCTGTGGCTATGGTGTCCCCCTaGTGCAGTTCTTCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKTRKGQLPVTQGSAVAMVSP*CSSSRH Trigger: ATGCCTTGAAGAACTGCAGCAGGGGGACACCATAGC...CACAGCAGACCCCTGTGTTACGGGTAACTGTCCCTTTCTTGTTTTAATTGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGGTTTTTGGTGCTGGGGAATTAAGCCCAGGGCTGTGATAGTTAAGTGTTTCTTCAAGGCATATTaGACATTCCCCCGTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFWCWGIKPRAVIVKCFFKAY*TFPRIF Trigger: AAAGATACGGGGGAATGTGCAATATGCCTTGAAGAA...ACACTTAACTATCACAGCCCTGGGCTTAATTCCCCAGCACCAAAAACCACTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATACTGCAGATATGCTAAGGATGGTTATTCTGGGCTGCAGTCTAGTATCTATGGTGTCCCCCTGCTaGAGTTCTTCAAGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: VHTADMLRMVILGCSLVSMVSPC*SSSRHI Trigger: AATATGCCTTGAAGAACTGCAGCAGGGGGACACCAT...AGATACTAGACTGCAGCCCAGAATAACCATCCTTAGCATATCTGCAGTATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR TCA 90 bp | GGGAGTGGTTTTTGGTGCTGGGGAATTAAGCCCAGGGCTGTGATAGTTAAGTGTCTGGACAAGATCTATTaGCTTCAAACCATTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGFWCWGIKPRAVIVKCLDKIY*LQTIHL Trigger: TAGATGAATGGTTTGAAGTCAATAGATCTTGTCCAG...ACACTTAACTATCACAGCCCTGGGCTTAATTCCCCAGCACCAAAAACCACTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| 3UTR CAA 72 bp | AGGCATGGGCAGACAGTGATAAGAGAACTGTTACTTTaGATGTCCAATCTTGAGATTCTCAGGACCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHGQTVIRELLL*MSNLEILRTQD Trigger: ATCCTGGGTCCTGAGAATCTCAAGATTGGACATCAAAAGTAACAGTTCTCTTATCACTGTCTGCCCATGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS-3UTR GCA 90 bp | GAAGTTATATACTCTAGGAAAGGTAGGAGAATGGACTCCAAAGGACTGACATGCTTCTTCAAGGCATATTaGACATTCCCCCGTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVIYSRKGRRMDSKGLTCFFKAY*TFPRIF Trigger: AAAGATACGGGGGAATGTGCAATATGCCTTGAAGAA...GCATGTCAGTCCTTTGGAGTCCATTCTCCTACCTTTCCTAGAGTATATAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CAA 72 bp | AAAGAGAGAATGAAAAGGTTTAAAGCAGGATCAACATaGACAATACATTCACATGGACAGAGTGGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KERMKRFKAGST*TIHSHGQSGLQ Trigger: CTGCAGTCCACTCTGTCCATGTGAATGTATTGTCAATGTTGATCCTGCTTTAAACCTTTTCATTCTCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| 3UTR CAA 72 bp | TATCTTTACTCAGCACATCCTCATTATACGTTATTCTaGGCTTTGTTAAACACATCACAAGATGCAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLYSAHPHYTLF*ALLNTSQDANP Trigger: TGGATTTGCATCTTGTGATGTGTTTAACAAAGCCAAGAATAACGTATAATGAGGATGTGCTGAGTAAAGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148425.2 |
||
| CDS GCA 90 bp | GGCCGGTCCCGGTCCCTAGCGCCGACGCTGTCCTCTGGGCTGCTGTaGACTGAGTCCTGTGAGCCGTACGGGCCGCCGCCGCCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRSRSLAPTLSSGLL*TESCEPYGPPPPPA Trigger: CGCTGGCGGCGGCGGCGGCCCGTACGGCTCACAGGACTCAGTGCACAGCAGCCCAGAGGACAGCGTCGGCGCTAGGGACCGGGACCGGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079869.13 ENSMUST00000148425.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGTGGTTTTTGGTGCTGGGGAATTAAGCCCAGGGCTGTGATAGTTAAGTGTGTTCTTCAAGGCATATaGCACATTCCCCCGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFWCWGIKPRAVIVKCVLQGI*HIPPYL Trigger: AAGATACGGGGGAATGTGCAATATGCCTTGAAGAAC...ACACTTAACTATCACAGCCCTGGGCTTAATTCCCCAGCACCAAAAACCACTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127331.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGATGGAGAAAGAACAGGGTAAAAGTGGTCAGGTAACTGGTTATATCACAGTTCTTCAAGGCATATaGCACATTCCCCCGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGMEKEQGKSGQVTGYITVLQGI*HIPPYL Trigger: AAGATACGGGGGAATGTGCAATATGCCTTGAAGAAC...TGTGATATAACCAGTTACCTGACCACTTTTACCCTGTTCTTTCTCCATCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079869.13 |
||
| CDS GCA 72 bp | CGGTCCCTAGCGCCGACGCTGTCCTCTGGGCTGCTGTaGACTGAGTCCTGTGAGCCGTACGGGCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSLAPTLSSGLL*TESCEPYGPPP Trigger: CGGCGGCGGCCCGTACGGCTCACAGGACTCAGTGCACAGCAGCCCAGAGGACAGCGTCGGCGCTAGGGACCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079869.13 ENSMUST00000148425.2 |
||
| CDS GCA 72 bp | ATACACAGGCAAGGCAGCCGTGCTATGGTGTCCCCCTaGTGCAGTTCTTCAAGGCATATTGCACATTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: IHRQGSRAMVSP*CSSSRHIAHSP Trigger: GGGGGAATGTGCAATATGCCTTGAAGAACTGCAGCAGGGGGACACCATAGCACGGCTGCCTTGCCTGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079869.13 ENSMUST00000127331.2 |
||
| CDS TCA 72 bp | CTATTGACTTCAAACCATTCATCTATGCAGCCTTTATaGTATATACACAGGCAAGGCAGCCGTGCTATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTSNHSSMQPL*YIHRQGSRAMV Trigger: CACCATAGCACGGCTGCCTTGCCTGTGTATATATCATAAAGGCTGCATAGATGAATGGTTTGAAGTCAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079869.13 ENSMUST00000127331.2 |
||