Pregenerated sensors for ZNRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079478Ensembl transcript IDs: ENSMUST00000025885.6, ENSMUST00000159693.2, ENSMUST00000162976.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCCTGGGCTGCCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTaGACGGGGTACTGGTGGCTGGGATGGGGGCCGAGAGCTCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RLGCLEPGCCAFTVL*TGYWWLGWGPRARG Trigger: GCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 90 bp | TGCAGCCGGAAGAGGAGGCGCCTGGGCTGCCTTGAGCCCGGCTGCTaGGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: CSRKRRRLGCLEPGC*AFTVLWTGYWWLGW Trigger: CCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 90 bp | AGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTGCCTTGAGCCCGGCTaGTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: RCSRKRRRLGCLEPG*CAFTVLWTGYWWLG Trigger: TCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 90 bp | CGCGTCCGTATTTGGAGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTaGCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGG | + |
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Preference number: 1 (lower is better) Translates to: RVRIWRCSRKRRRLG*LEPGCCAFTVLWTG Trigger: CCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 90 bp | CAGGAGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTaGAGCCGGAAGAGGAGGCGCCTGGGCTGCCTTGAGCCCGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: QEGRLCGSHRVRIWR*SRKRRRLGCLEPGC Trigger: GCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | CCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTaGGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTAGATGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: PAAAPSQCSGRGTGG*DGGRELEAGSVDEA Trigger: GGCCTCATCTACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | GCCACCGCGTCCGTATTTGGAGGTGCAGCCGGAAGAGGAGGCGCCTaGGCTGCCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: ATASVFGGAAGRGGA*AALSPAAAPSQCSG Trigger: TCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR TCA 90 bp | TGGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTAGATaGGGCCAGCTGGTGTTCCCGAGCTTGAGAGAGCGCCGCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: WWLGWGPRARGRLCR*GQLVFPSLRERRLC Trigger: GCACAGGCGGCGCTCTCTCAAGCTCGGGAACACCAGCTGGCCTCATCTACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | CTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTaGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: LEPGCCAFTVLWTGY*WLGWGPRARGRLCR Trigger: TCTACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | CTTCTGCAGGAGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTaGAGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTGCCTTGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LLQEGRLCGSHRVRI*RCSRKRRRLGCLEP Trigger: GGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTGCAGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | GCTCGACTGACGCCCAGGTTAGCTTCTGCAGGAGGGCCGTCTGTGTaGAAGCCACCGCGTCCGTATTTGGAGGTGCAGCCGGAAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: ARLTPRLASAGGPSV*KPPRPYLEVQPEEE Trigger: CTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTGCAGAAGCTAACCTGGGCGTCAGTCGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 90 bp | AGGCTGCCTAGGGCCTCGGCGCAAGCCCGGATAAGCCCACAGAGCTaGATACTAGTCTCCAAGGAGGTGCTAGAGCCCAGCTCGACTGAC | + |
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Preference number: 1 (lower is better) Translates to: RLPRASAQARISPQS*ILVSKEVLEPSSTD Trigger: GTCAGTCGAGCTGGGCTCTAGCACCTCCTTGGAGACTAGTATCCAGCTCTGTGGGCTTATCCGGGCTTGCGCCGAGGCCCTAGGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| 3UTR GCA 90 bp | CAGCTGGTGTTCCCGAGCTTGAGAGAGCGCCGCCTGTGCATTCAGTaGTTAATGCCACAGCACGCAGGAGTTTCCACTGTCACCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QLVFPSLRERRLCIQ*LMPQHAGVSTVTSQ Trigger: CTGGGAGGTGACAGTGGAAACTCCTGCGTGCTGTGGCATTAAGCACTGAATGCACAGGCGGCGCTCTCTCAAGCTCGGGAACACCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCGCCTGGGCTGCCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGAGCGCCTGGGCTGCCTTaGGCCCGGCTGCTGCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGAWAALSPAAAPSQCSGAPGLP*ARLLRL Trigger: AAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGC...TCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTGTGGACGGGGTACTGGTaGCTGGGATGGGGGCCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LEPGCCAFTVLWTGYWWLWTGYW*LGWGPR Trigger: TCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCA...CAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CAA 90 bp | TCCGTATTTGGAGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTGCCTaGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: SVFGGAAGRGGAWAA*SPAAAPSQCSGRGT Trigger: AGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTGCAGCCGGAAGAGGAGCTTGAGCCCGGCTGCTaGGCCTTCACAGTGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSVWKPPRPYLEVQPEEELEPGC*AFTVLW Trigger: CCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAG...CTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGAGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTGCAGCCGCCTTCACAGTGCTCTaGACGGGGTACTGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: CRRAVCVEATASVFGGAAAFTVL*TGYWWL Trigger: CAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGC...GGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 72 bp | CGGAAGAGGAGGCGCCTGGGCTGCCTTGAGCCCGGCTaGTGCGCCTTCACAGTGCTCTGGACGGGGTACTGG | + |
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Preference number: 3 (lower is better) Translates to: RKRRRLGCLEPG*CAFTVLWTGYW Trigger: CCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | GGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTaGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GCCAFTVLWTGY*WLGWGPRARGR Trigger: CCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 72 bp | AAGAGGAGGCGCCTGGGCTGCCTTGAGCCCGGCTGCTaGGCCTTCACAGTGCTCTGGACGGGGTACTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KRRRLGCLEPGC*AFTVLWTGYWW Trigger: CCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | TGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTaGCTGGGATGGGGGCCGAGAGCTCGAGGCAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: CCAFTVLWTGYW*LGWGPRARGRL Trigger: GAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | TGCCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTaGACGGGGTACTGGTGGCTGGGATGGGGGCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLEPGCCAFTVL*TGYWWLGWGPR Trigger: TCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | GAGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTaGAGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: EGRLCGSHRVRI*RCSRKRRRLGC Trigger: GCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | TCCGTATTTGGAGGTGCAGCCGGAAGAGGAGGCGCCTaGGCTGCCTTGAGCCCGGCTGCTGCGCCTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: SVFGGAAGRGGA*AALSPAAAPSQ Trigger: CTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR TCA 72 bp | GGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTAGATaGGGCCAGCTGGTGTTCCCGAGCTTGAGAGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: GWGPRARGRLCR*GQLVFPSLRER Trigger: GCGCTCTCTCAAGCTCGGGAACACCAGCTGGCCTCATCTACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR GCA 72 bp | CGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTaGAGCCGGAAGAGGAGGCGCCTGGGCTGCCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: RLCGSHRVRIWR*SRKRRRLGCLE Trigger: CTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGATCAGGATAGAGGTCTCAGTGATCCAGCTGTTTCAGGCTGCCTAGGGCCTGGCGCCTGGGCTGCCTaGAGCCCGGCTGCTGCGCCT | + |
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Preference number: 3 (lower is better) Translates to: RDQDRGLSDPAVSGCLGPGAWAA*SPAAAP Trigger: AGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCC...AGGCCCTAGGCAGCCTGAAACAGCTGGATCACTGAGACCTCTATCCTGATCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| 3UTR CCA 72 bp | ACGCCCAGGTTAGCTTCTGCAGGAGGGCCGTCTGTGTaGAAGCCACCGCGTCCGTATTTGGAGGTGCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: TPRLASAGGPSV*KPPRPYLEVQP Trigger: CGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTGCAGAAGCTAACCTGGGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| 3UTR CCA 72 bp | AGGGCCTCGGCGCAAGCCCGGATAAGCCCACAGAGCTaGATACTAGTCTCCAAGGAGGTGCTAGAGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RASAQARISPQS*ILVSKEVLEPS Trigger: GCTGGGCTCTAGCACCTCCTTGGAGACTAGTATCCAGCTCTGTGGGCTTATCCGGGCTTGCGCCGAGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| 3UTR GCA 72 bp | CAGCTGGTGTTCCCGAGCTTGAGAGAGCGCCGCCTGTaGATTCAGTGCTTAATGCCACAGCACGCAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: QLVFPSLRERRL*IQCLMPQHAGV Trigger: AACTCCTGCGTGCTGTGGCATTAAGCACTGAATGCACAGGCGGCGCTCTCTCAAGCTCGGGAACACCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| 3UTR GCA 72 bp | TTCCCGAGCTTGAGAGAGCGCCGCCTGTGCATTCAGTaGTTAATGCCACAGCACGCAGGAGTTTCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: FPSLRERRLCIQ*LMPQHAGVSTV Trigger: GACAGTGGAAACTCCTGCGTGCTGTGGCATTAAGCACTGAATGCACAGGCGGCGCTCTCTCAAGCTCGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| 3UTR CAA 72 bp | GGAGGTGCAGCCGGAAGAGGAGGCGCCTGGGCTGCCTaGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GGAAGRGGAWAA*SPAAAPSQCSG Trigger: TCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGCCCAGGCGCCTCCTCTTCCGGCTGCACCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| CDS-3UTR GCA 90 bp | TTCTGCAGGAGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTGCACGGGAGATGCGATCCTaGCGCTCCCGTCGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FCRRAVCVEATASVFGGAREMRS*RSRRAC Trigger: GCAGGCGCGACGGGAGCGGCAGGATCGCATCTCCCG...TGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCTCCTGCAGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS-3UTR GCA 90 bp | TGGACGGGGTACTGGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTACGTGTCGCCCAGCATaGGGTAACCACGGAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WTGYWWLGWGPRARGRLCTCRPA*GNHGAG Trigger: ACCTGCTCCGTGGTTACCGCATGCTGGGCGACACGT...ACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS-3UTR GCA 90 bp | CAGTGCTCTGGACGGGGTACTGGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCACTCTTCTCCCCACAGTaGACACTCGGACCCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: QCSGRGTGGWDGGRELEALFSPQ*TLGPSP Trigger: GGGTGAGGGTCCGAGTGTGCACTGTGGGGAGAAGAG...TGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS-3UTR TCA 90 bp | TGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTGGGATGGGGGCCGTCGGAGGCTCCCAGGTaGAATCGTCGACATCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CCAFTVLWTGYWWLGWGPSEAPR*NRRHLH Trigger: GTGCAGATGTCGACGATTTCACCTGGGAGCCTCCGA...CGGCCCCCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS-3UTR GCA 90 bp | TCCAAGGAGGTGCTAGAGCCCAGCTCGACTGACGCCCAGGTTAGCTTCTGCAGGCGCTCCCGTCGCGCCTaGAGCACCTTCGTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SKEVLEPSSTDAQVSFCRRSRRA*STFVSA Trigger: AGCTGAGACGAAGGTGCTGCAGGCGCGACGGGAGCG...CCTGCAGAAGCTAACCTGGGCGTCAGTCGAGCTGGGCTCTAGCACCTCCTTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS-3UTR TCA 90 bp | TGGACGGGGTACTGGTGGCTGGGATGGGGGCCGAGAGCTCGAGGCAGGCTCTGTATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: WTGYWWLGWGPRARGRLCIFIHV*VELLTS Trigger: GCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGAT...ACAGAGCCTGCCTCGAGCTCTCGGCCCCCATCCCAGCCACCAGTACCCCGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159693.2 ENSMUST00000162976.2 |
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| CDS-3UTR GCA 90 bp | GCTGCCTTGAGCCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTTTCCGCTGTTTATCTTaGAGGAGGATCGTCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: AALSPAAAPSQCSGRGTGFRCLS*RRIVSP Trigger: GGGTGAGACGATCCTCCTGCAAGATAAACAGCGGAA...ACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGGCTCAAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGGTGCTAGAGCCCAGCTCGACTGACGCCCAGGTTAGCTTCTGCAGGAGGTTCCGCTGTTTATCTTaGAGGAGGATCGTCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: KEVLEPSSTDAQVSFCRRFRCLS*RRIVPQ Trigger: CTGCGGGACGATCCTCCTGCAAGATAAACAGCGGAA...CCTCCTGCAGAAGCTAACCTGGGCGTCAGTCGAGCTGGGCTCTAGCACCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGAGGGTTTTTCTCAGGGGAACAGGGATCAGGATAGAGGTCTCAGTGATATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLEGFSQGNRDQDRGLSDIFIHV*VELLTS Trigger: GCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGAT...ATCACTGAGACCTCTATCCTGATCCCTGTTCCCCTGAGAAAAACCCTCCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS GCA 90 bp | CTTGCAGGAGGATCGTCCCGCAGTCGGCGCACGTGTCGCCCAGCATaGGGTAACCACGGAGCAGGTAGTCCCCCATCAGACGGGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: LAGGSSRSRRTCRPA*GNHGAGSPPSDGRC Trigger: GCATCTCCCGTCTGATGGGGGACTACCTGCTCCGTGGTTACCGCATGCTGGGCGACACGTGCGCCGACTGCGGGACGATCCTCCTGCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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| CDS GCA 90 bp | AGGAGGATCGTCTCACCCCGCAGTCGGCGCACGTGTCGCCCAGCATaGGGTAACCACGGAGCAGGTAGTCCCCCATCAGACGGGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: RRIVSPRSRRTCRPA*GNHGAGSPPSDGRC Trigger: GCATCTCCCGTCTGATGGGGGACTACCTGCTCCGTGGTTACCGCATGCTGGGCGACACGTGCGCCGACTGCGGGGTGAGACGATCCTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS GCA 90 bp | TCCCCCATCAGACGGGAGATGCGATCCTGCCGCTCCCGTCGCGCCTaGAGCACCTTCGTCTCAGCTTCAGTCGGAGGCTCCCAGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SPIRREMRSCRSRRA*STFVSASVGGSQVK Trigger: TTTCACCTGGGAGCCTCCGACTGAAGCTGAGACGAAGGTGCTGCAGGCGCGACGGGAGCGGCAGGATCGCATCTCCCGTCTGATGGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025885.6 ENSMUST00000159693.2 |
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| CDS-3UTR CAA 90 bp | CCCGGCTGCTGCGCCTTCACAGTGCTCTGGACGGGGTACTGGTGGCTGGGATGGTTTCCGCTGTTTATCTaGCAGGAGGATCGTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: PGCCAFTVLWTGYWWLGWFPLFI*QEDRPA Trigger: TGCGGGACGATCCTCCTGCAAGATAAACAGCGGAAA...CCATCCCAGCCACCAGTACCCCGTCCAGAGCACTGTGAAGGCGCAGCAGCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS TCA 90 bp | CTCGAGGCAGGCTCTGTAGATGAGGCCAGCTGGTGTTCCCGAGCTTaGGAGAGCGCCGCCTGTGCATTCAGTGCCGGGTTATCTTTATCC | + |
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Preference number: 5 (lower is better) Translates to: LEAGSVDEASWCSRA*ESAACAFSAGLSLS Trigger: GGATAAAGATAACCCGGCACTGAATGCACAGGCGGCGCTCTCTCAAGCTCGGGAACACCAGCTGGCCTCATCTACAGAGCCTGCCTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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| CDS-3UTR CAA 90 bp | AGGGCCGTCTGTGTGGAAGCCACCGCGTCCGTATTTGGAGGTGCAGCCGGAAGATTTCCGCTGTTTATCTaGCAGGAGGATCGTCTCACC | + |
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Preference number: 5 (lower is better) Translates to: RAVCVEATASVFGGAAGRFPLFI*QEDRLT Trigger: GGTGAGACGATCCTCCTGCAAGATAAACAGCGGAAA...TCTTCCGGCTGCACCTCCAAATACGGACGCGGTGGCTTCCACACAGACGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS TCA 90 bp | GAGCGCCGCCTGTGCATTCAGTGCCGGGTTATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGCCACACAGTAGATTTTCCGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ERRLCIQCRVIFIHV*VELLTSHTVDFPLF Trigger: AAACAGCGGAAAATCTACTGTGTGGCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGATAACCCGGCACTGAATGCACAGGCGGCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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| CDS TCA 90 bp | ACAGTGCACACTCGGACCCTCACCCGGGTTATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGCCACACAGTAGATTTTCCGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: TVHTRTLTRVIFIHV*VELLTSHTVDFPLF Trigger: AAACAGCGGAAAATCTACTGTGTGGCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGATAACCCGGGTGAGGGTCCGAGTGTGCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS GCA 72 bp | AGACGGGAGATGCGATCCTGCCGCTCCCGTCGCGCCTaGAGCACCTTCGTCTCAGCTTCAGTCGGAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RREMRSCRSRRA*STFVSASVGGS Trigger: GGAGCCTCCGACTGAAGCTGAGACGAAGGTGCTGCAGGCGCGACGGGAGCGGCAGGATCGCATCTCCCGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025885.6 ENSMUST00000159693.2 |
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| CDS GCA 72 bp | GGATCGTCCCGCAGTCGGCGCACGTGTCGCCCAGCATaGGGTAACCACGGAGCAGGTAGTCCCCCATCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSSRSRRTCRPA*GNHGAGSPPSD Trigger: GTCTGATGGGGGACTACCTGCTCCGTGGTTACCGCATGCTGGGCGACACGTGCGCCGACTGCGGGACGATCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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| CDS GCA 72 bp | GTCTCACCCCGCAGTCGGCGCACGTGTCGCCCAGCATaGGGTAACCACGGAGCAGGTAGTCCCCCATCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VSPRSRRTCRPA*GNHGAGSPPSD Trigger: GTCTGATGGGGGACTACCTGCTCCGTGGTTACCGCATGCTGGGCGACACGTGCGCCGACTGCGGGGTGAGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS TCA 72 bp | GGCTCTGTAGATGAGGCCAGCTGGTGTTCCCGAGCTTaGGAGAGCGCCGCCTGTGCATTCAGTGCCGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: GSVDEASWCSRA*ESAACAFSAGL Trigger: TAACCCGGCACTGAATGCACAGGCGGCGCTCTCTCAAGCTCGGGAACACCAGCTGGCCTCATCTACAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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| CDS GCA 72 bp | TCCTCTGTAGCTATCGCCACTCTCTTCTCCCCACAGTaGACACTCGGACCCTCACCCGGGTTATCTTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SSVAIATLFSPQ*TLGPSPGLSLS Trigger: GGATAAAGATAACCCGGGTGAGGGTCCGAGTGTGCACTGTGGGGAGAAGAGAGTGGCGATAGCTACAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS CAA 72 bp | CTGACAAGCCACACAGTAGATTTTCCGCTGTTTATCTaGCAGGAGGATCGTCCCGCAGTCGGCGCACGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LTSHTVDFPLFI*QEDRPAVGARV Trigger: GACACGTGCGCCGACTGCGGGACGATCCTCCTGCAAGATAAACAGCGGAAAATCTACTGTGTGGCTTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025885.6 ENSMUST00000162976.2 |
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| CDS CAA 72 bp | CTGACAAGCCACACAGTAGATTTTCCGCTGTTTATCTaGCAGGAGGATCGTCTCACCCCGCAGTCGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: LTSHTVDFPLFI*QEDRLTPQSAH Trigger: GTGCGCCGACTGCGGGGTGAGACGATCCTCCTGCAAGATAAACAGCGGAAAATCTACTGTGTGGCTTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159693.2 |
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| CDS TCA 72 bp | ACTCGGACCCTCACCCGGGTTATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGCCACACAGTAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: TRTLTRVIFIHV*VELLTSHTVDF Trigger: AAAATCTACTGTGTGGCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGATAACCCGGGTGAGGGTCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162976.2 |
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| CDS TCA 72 bp | CTGTGCATTCAGTGCCGGGTTATCTTTATCCACGTCTaGGTCGAGCTCCTGACAAGCCACACAGTAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LCIQCRVIFIHV*VELLTSHTVDF Trigger: AAAATCTACTGTGTGGCTTGTCAGGAGCTCGACTCAGACGTGGATAAAGATAACCCGGCACTGAATGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025885.6 |
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