Pregenerated sensors for ZNHIT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074182Ensembl transcript IDs: ENSMUST00000098534.9, ENSMUST00000196413.5, ENSMUST00000197604.3, ENSMUST00000197940.5, ENSMUST00000199033.5, ENSMUST00000200574.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTATGCTGTTTAATTACTTTTTGGATAAACAACACACTACCCACTaGCGGACCCAGTCACCCAGCAGTCCAGTAACACACAATCTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: LMLFNYFLDKQHTTH*RTQSPSSPVTHNLL Trigger: GAGAAGATTGTGTGTTACTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACAGCATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| 3UTR-3UTR CCA 90 bp | CCATCTGCATCCCGTGAGATGGAGCCTCCCGTCTTCCCTGTGGCCCTGGCAACAATCTTCTCAGCCCTCTaGGAACGGCCACCTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PSASREMEPPVFPVALATIFSAL*ERPPSF Trigger: GAAAGAAGGTGGCCGTTCCCAGAGGGCTGAGAAGAT...TGTTGCCAGGGCCACAGGGAAGACGGGAGGCTCCATCTCACGGGATGCAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CAA 90 bp | GAGGAAAGTGCTGATTTCAGTGAGGAGAGCCCTCACTCCCCACACTaGGATCACATGTCCTTCTGTGTACTTTCTCCCTCTTCCCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: EESADFSEESPHSPH*DHMSFCVLSPSSPK Trigger: TTTGGGGGAAGAGGGAGAAAGTACACAGAAGGACATGTGATCCAAGTGTGGGGAGTGAGGGCTCTCCTCACTGAAATCAGCACTTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTCAGGGACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGATGGAGCAGGAGCTCATCCTATaGAAGAAGAGGGTTTATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSGTQTPPLAPSASREMEQELIL*KKRVYK Trigger: CTTATAAACCCTCTTCTTCCATAGGATGAGCTCCTG...CTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAATCTTCTCAGCCCTCTaGGAACGGCCACCTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LITFWINNTLPTDGPSHPIFSAL*ERPPSF Trigger: GAAAGAAGGTGGCCGTTCCCAGAGGGCTGAGAAGAT...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| 3UTR TCA 72 bp | GACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTaGGATGGAGCCTCCCGTCTTCCCTGTGGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DTDSTFGSICIP*DGASRLPCGPG Trigger: GCCAGGGCCACAGGGAAGACGGGAGGCTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CCA 72 bp | CCTTCCTGCCCGTGTCAGGGACACAGACTCCACCTTTaGCTCCATCTGCATCCCGTGAGATGGAGCCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PSCPCQGHRLHL*LHLHPVRWSLP Trigger: CGGGAGGCTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CCA 72 bp | AGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGATaGAGCCTCCCGTCTTCCCTGTGGCCCTGGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: RLHLWLHLHPVR*SLPSSLWPWQQ Trigger: TTGTTGCCAGGGCCACAGGGAAGACGGGAGGCTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR GCA 72 bp | CCCCAAACCCCCAGACAGTTCAGTTCAATTCCTTCCTaGCCGTGTCAGGGACACAGACTCCACCTTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQTPRQFSSIPS*PCQGHRLHLWL Trigger: GAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAGGAAGGAATTGAACTGAACTGTCTGGGGGTTTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR TCA 72 bp | TCTTCCCTGTGGCCCTGGCAACAACACGGCTCCACATaGACCCTTTGTATAGCACATAAGCCCAACCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLWPWQQHGST*TLCIAHKPNQR Trigger: CCTCTGGTTGGGCTTATGTGCTATACAAAGGGTTCATGTGGAGCCGTGTTGTTGCCAGGGCCACAGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR TCA 72 bp | CACACTGAATGCCTAGCAAGGACTACAGCAGTCGGGTaGACCAGGAGCTCATCCTATGGAAGAAGAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HTECLARTTAVG*TRSSSYGRRGF Trigger: AAACCCTCTTCTTCCATAGGATGAGCTCCTGGTTCACCCGACTGCTGTAGTCCTTGCTAGGCATTCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CCA 72 bp | GAGAGCGCCAGCGTTGTGGTTGACACAGGTGACCCTTaGGCTTGGTCTCGTGACAACTTAACAAATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ESASVVVDTGDP*AWSRDNLTNKT Trigger: TGTTTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAACCACAACGCTGGCGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CCA 72 bp | GACTACAGCAGTCGGGTGAACCAGGAGCTCATCCTATaGAAGAAGAGGGTTTATAAGTCACTTAGCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DYSSRVNQELIL*KKRVYKSLSSK Trigger: TTTTGAGCTAAGTGACTTATAAACCCTCTTCTTCCATAGGATGAGCTCCTGGTTCACCCGACTGCTGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR TCA 72 bp | TTTAATTACTTTTTGGATAAACAACACACTACCCACTaGCGGACCCAGTCACCCAGCAGTCCAGTAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: FNYFLDKQHTTH*RTQSPSSPVTH Trigger: GTGTGTTACTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| 3UTR CCA 72 bp | AAATTGGGAATAAATATGCATATTAGCCAAATGAGCTaGCAGTTATATTTAGGTGAACTCCGGGAAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLGINMHISQMS*QLYLGELREAE Trigger: CTCTGCTTCCCGGAGTTCACCTAAATATAACTGCCAGCTCATTTGGCTAATATGCATATTTATTCCCAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| 3UTR CAA 72 bp | TCCTTCCTGCCCGTGTCAGGGACACAGACTCCACCTTaGGCTCCATCTGCATCCCGTGAGATGGAGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPVSGTQTPP*APSASREMEPP Trigger: GGGAGGCTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGATGGAGCCTCCCGTCTTCCCTGTGGCCCTGGCAACAACACGGCTCCACACGTGGTCTTAGTTCCTaGCAGTCCGTTCCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRWSLPSSLWPWQQHGSTRGLSS*QSVPLL Trigger: GAGGAGAGGAACGGACTGGCAGGAACTAAGACCACG...TGTGGAGCCGTGTTGTTGCCAGGGCCACAGGGAAGACGGGAGGCTCCATCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTCACTCCCCACACTTGGATCACATGTCCTTCTGTGTACTTTCTCCCTCTTCCCTCCGCTACCCTCTaGGAACCTCCTCCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTPHTWITCPSVYFLPLPSATL*EPPPGV Trigger: GACTCCGGGAGGAGGTTCCCAGAGGGTAGCGGAGGG...AAGAGGGAGAAAGTACACAGAAGGACATGTGATCCAAGTGTGGGGAGTGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGATGGAGCCTCCCGTCTTCCCTGTGGCCCTGGCAACAACACGGCTCCACAACCCTCATTAAAATTTaGACCCCAGTCTGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRWSLPSSLWPWQQHGSTTLIKI*TPVCDC Trigger: ACAGTCACAGACTGGGGTCCAAATTTTAATGAGGGT...TGTGGAGCCGTGTTGTTGCCAGGGCCACAGGGAAGACGGGAGGCTCCATCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCCGTGTCAGGGACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGGTCCTTCAAGTTGTCTaGAAGGCTTTTGTAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPVSGTQTPPLAPSASREVLQVV*KAFVRI Trigger: GATCCTTACAAAAGCCTTTCAGACAACTTGAAGGAC...CTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCTTCCCCCAAACCCCCAGACAGTTCAGTTCAATTCCTTCCTGCCCGTGCAGTCTACTACTTCCTaGTTCACCACAGCTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPPNPQTVQFNSFLPVQSTTS*FTTAKS Trigger: GGACTTAGCTGTGGTGAAGCAGGAAGTAGTAGACTG...CACGGGCAGGAAGGAATTGAACTGAACTGTCTGGGGGTTTGGGGGAAGAGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CCA 90 bp | GTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAACATCCCGTCTAAGTCCCTaGCTCCCTCCCCACCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VDTGDPWAWSRDNLTNKTSRLSP*LPPHQP Trigger: CGGCTGGTGGGGAGGGAGCCAGGGACTTAGACGGGA...TGTTTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGTGTCAGGGACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGTGCCAACAAAACTGCTaGTTCCTATGGTCAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPVSGTQTPPLAPSASRECQQNC*FLWSKT Trigger: AGTTTTTGACCATAGGAAGCAGCAGTTTTGTTGGCA...CTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGTCCAGTGCAGGAAAAGCGCATaGAGCGTGGACATCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FWINNTLPTDGPSHPAVQCRKSA*SVDICT Trigger: AGTACAGATGTCCACGCTGCATGCGCTTTTCCTGCA...CTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVDTGDPWAWSRDNLTNKEPISS*CPLGGS Trigger: TGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTC...TTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITFWINNTLPTDGPSHPAEPISS*CPLGGS Trigger: TGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTC...TGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAACTCGGGGGTTCATCTaGGGCTCTTCCTTCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITFWINNTLPTDGPSHPATRGFI*GSSFTF Trigger: GAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGT...TGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | TTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGTCCAGCTTGTCTGCCGTTCTTaGCACGTCTTCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FWINNTLPTDGPSHPAVQLVCRS*HVFQKS Trigger: AGATTTTTGGAAGACGTGGCAAGAACGGCAGACAAG...CTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCCGTTCTTGCCACGTCTTCCAAAAATCTATAGTCACTCAGGAGATTCAACTCGGGGGTTCATCTaGGGCTCTTCCTTCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPFLPRLPKIYSHSGDSTRGFI*GSSFTF Trigger: GAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGT...TGAATCTCCTGAGTGACTATAGATTTTTGGAAGACGTGGCAAGAACGGCAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCATGCAGGAAAAGCGCATaGAGCGTGGACATCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ITFWINNTLPTDGPSHPACRKSA*SVDICT Trigger: AGTACAGATGTCCACGCTGCATGCGCTTTTCCTGCA...TGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | GACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAACAGGTTTACACAGGGCAAACTaGAGGAAAAGCGCATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTGDPWAWSRDNLTNKTGLHRAN*RKSACS Trigger: GCTGCATGCGCTTTTCCTGCAGTTTGCCCTGTGTAA...ACCTGTTTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGATGCTTTGATGTGAGGCATTCTCTTCAGAGAGCTGAGACCACAGAGAGCCTTGTCTGCCGTTCTTaGCACGTCTTCCAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ARCFDVRHSLQRAETTESLVCRS*HVFQKS Trigger: AGATTTTTGGAAGACGTGGCAAGAACGGCAGACAAG...GCTCTCTGTGGTCTCAGCTCTCTGAAGAGAATGCCTCACATCAAAGCATCTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATCTCTTGAAACCTTGTCTGCCGTTCTTGCCACGTCTTCCAAAAATCTATGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYLLKPCLPFLPRLPKIYEPISS*CPLGGS Trigger: TGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTC...ATAGATTTTTGGAAGACGTGGCAAGAACGGCAGACAAGGTTTCAAGAGATACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR GCA 90 bp | TTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGTCCAGACATGCCAACAAAACTaGTGCTTCCTATGGTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FWINNTLPTDGPSHPAVQTCQQN*CFLWSK Trigger: TTTTGACCATAGGAAGCAGCAGTTTTGTTGGCATGT...CTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCATTACACAGGGCAAACTaGAGGAAAAGCGCATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LITFWINNTLPTDGPSHPLHRAN*RKSACS Trigger: GCTGCATGCGCTTTTCCTGCAGTTTGCCCTGTGTAA...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CCA 90 bp | GTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAACACCATTGCCAAGCTTCTaGGCAGACTCACTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VDTGDPWAWSRDNLTNKTPLPSF*ADSLFT Trigger: AGTGAAAAGTGAGTCTGCCCAGAAGCTTGGCAATGG...TGTTTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAATCTTCCTTTACGTTCTaGCCAACAAACAACTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVDTGDPWAWSRDNLTNKSSFTF*PTNNSC Trigger: ACAGGAGTTGTTTGTTGGTCAGAACGTAAAGGAAGA...TTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR TCA 90 bp | CATATTAGCCAAATGAGCTGGCAGTTATATTTAGGTGAACTCCGGGAAGCAGAGACAAGTCTCACACCTTaGCAGAGCCAATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HISQMSWQLYLGELREAETSLTP*QSQFPL Trigger: AAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGT...CTCTGCTTCCCGGAGTTCACCTAAATATAACTGCCAGCTCATTTGGCTAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAACAACTCCTGTTTTATaGTCAAGTCCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVDTGDPWAWSRDNLTNKTTPVL*SSPPPS Trigger: TGAAGGAGGAGGACTTGACCATAAAACAGGAGTTGT...TTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACAAAGCGCATGCAGCGTaGACATCTGTACTTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLITFWINNTLPTDGPSHKAHAA*TSVLRF Trigger: GAAGCGAAGTACAGATGTCCACGCTGCATGCGCTTT...GTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAACCCTCATTAAAATTTaGACCCCAGTCTGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITFWINNTLPTDGPSHPATLIKI*TPVCDC Trigger: ACAGTCACAGACTGGGGTCCAAATTTTAATGAGGGT...TGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR TCA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAACAAGTCTCACACCTTaGCAGAGCCAATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LITFWINNTLPTDGPSHPTSLTP*QSQFPL Trigger: AAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGT...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGTCTTTTCAAGAAAGTATCTCTTGAAACCTTGTCTGCCGTTCTTGCCATTACACAGGGCAAACTaGAGAAACAAACAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVFSRKYLLKPCLPFLPLHRAN*RNKQEA Trigger: TGCCTCCTGTTTGTTTCTTCAGTTTGCCCTGTGTAA...TGGCAAGAACGGCAGACAAGGTTTCAAGAGATACTTTCTTGAAAAGACCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAAAGCGCATGCAGCGTaGACATCTGTACTTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCCLITFWINNTLPTDGPKAHAA*TSVLRF Trigger: GAAGCGAAGTACAGATGTCCACGCTGCATGCGCTTT...GGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACAGCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCCCATTGCCAAGCTTCTaGGCAGACTCACTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCCLITFWINNTLPTDGPPLPSF*ADSLFT Trigger: AGTGAAAAGTGAGTCTGCCCAGAAGCTTGGCAATGG...GGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACAGCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCATGCCAACAAAACTGCTaGTTCCTATGGTCAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LITFWINNTLPTDGPSHPCQQNC*FLWSKT Trigger: AGTTTTTGACCATAGGAAGCAGCAGTTTTGTTGGCA...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAACATGCCAACAAAACTaGTGCTTCCTATGGTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LITFWINNTLPTDGPSHPTCQQN*CFLWSK Trigger: TTTTGACCATAGGAAGCAGCAGTTTTGTTGGCATGT...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCATACCTTATCATATTTTaGTGCATATTTTCGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITFWINNTLPTDGPSHPAYLIIF*CIFSTL Trigger: GAGGGTCGAAAATATGCAGCAAAATATGATAAGGTA...TGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR TCA 90 bp | TTATGCTGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCGTCCTTCAAGTTGTCTaGAAGGCTTTTGTAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LCCLITFWINNTLPTDGPVLQVV*KAFVRI Trigger: GATCCTTACAAAAGCCTTTCAGACAACTTGAAGGAC...GGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACAGCATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR GCA 90 bp | TTATGCTGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCTACCTTATCATATTTTaGTGCATATTTTCGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCCLITFWINNTLPTDGPYLIIF*CIFSTL Trigger: GAGGGTCGAAAATATGCAGCAAAATATGATAAGGTA...GGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACAGCATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| 3UTR CAA 72 bp | TTTCGGGCACGATTCTTCATAAAGAACAGATATTTTTaGCGCTTTGGTCTTTTCAAGAAAGTATCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRARFFIKNRYF*RFGLFKKVSLE Trigger: TTCAAGAGATACTTTCTTGAAAAGACCAAAGCGCAAAAAATATCTGTTCTTTATGAAGAATCGTGCCCGAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS CCA 90 bp | TCCCCACCAGCCGCAGGCCTCGGCCGCGCCCCCTCCGCTACCCTCTaGGAACCTCCTCCCGGAGTCCCTTCCTTCTCAGCTGCAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPAAGLGRAPSATL*EPPPGVPSFSAADS Trigger: GGAATCTGCAGCTGAGAAGGAAGGGACTCCGGGAGGAGGTTCCCAGAGGGTAGCGGAGGGGGCGCGGCCGAGGCCTGCGGCTGGTGGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS GCA 90 bp | AACACGCCTTTCTCATCCTTCACCTCGGGCCCGCCCTCCACCTCCTaGTTCACCCACTGGCTGTCCGCAACACCACTGTCTAAATCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: NTPFSSFTSGPPSTS*FTHWLSATPLSKSD Trigger: GTCGGATTTAGACAGTGGTGTTGCGGACAGCCAGTGGGTGAAGCAGGAGGTGGAGGGCGGGCCCGAGGTGAAGGATGAGAAAGGCGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCCGTGTCAGGGACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGAGAGCCAATTTCCTCTaGCTGCCCACTCGGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPVSGTQTPPLAPSASRERANFL*LPTRGF Trigger: GAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCT...CTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACACGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS GCA 90 bp | TCATCCACCTCCTCTTCTTTCACCACCAGGCTACTATCCGCCTCCTaGTTCACTTCCAACACGCCTTTCTCATCCTTCACCTCGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSTSSSFTTRLLSAS*FTSNTPFSSFTSGP Trigger: CGGGCCCGAGGTGAAGGATGAGAAAGGCGTGTTGGAAGTGAAGCAGGAGGCGGATAGTAGCCTGGTGGTGAAAGAAGAGGAGGTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS GCA 90 bp | CTGTCCCACAAGTCTCACACCTTGACAGAGCCAATTTCCTCTTGCTaGCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCACCTTCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHKSHTLTEPISSC*PLGGSSGALPSPSR Trigger: ACGCGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTGGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS GCA 90 bp | AACAGGAGGCAGCTCTGTACCTTGACAGAGCCAATTTCCTCTTGCTaGCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCACCTTCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NRRQLCTLTEPISSC*PLGGSSGALPSPSR Trigger: ACGCGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS CCA 90 bp | CTTGACAGAGCCAATTTCCTCTTGCTGCCCACTCGGGGGTTCATCTaGGGCTCTTCCTTCACCTTCGCGTCTTCCATCGCTTCGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDRANFLLLPTRGFI*GSSFTFASSIASLL Trigger: CAAGAGCGAAGCGATGGAAGACGCGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000197940.5 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS GCA 90 bp | CTTCTGTCCCACAAGTCTCACACCTTGACAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCACCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLSHKSHTLTEPISS*CPLGGSSGALPSPS Trigger: CGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTGGGACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS GCA 90 bp | ACAAACAGGAGGCAGCTCTGTACCTTGACAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCACCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TNRRQLCTLTEPISS*CPLGGSSGALPSPS Trigger: CGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS TCA 90 bp | ACACAGGGCAAACTGAAGAAACAAACAGGAGGCAGCTCTGTACCTTaGCAGAGCCAATTTCCTCTTGCTGCCCACTCGGGGGTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQGKLKKQTGGSSVP*QSQFPLAAHSGVHL Trigger: CAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTTTGTTTCTTCAGTTTGCCCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR CAA 90 bp | TTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGTCCAGCCTTGTCTGCCGTTCTaGCCACGTCTTCCAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: FWINNTLPTDGPSHPAVQPCLPF*PRLPKI Trigger: GATTTTTGGAAGACGTGGCAAGAACGGCAGACAAGG...CTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | TTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCAGCAGTCCAGGTATCTCTTGAAACCTaGTCTGCCGTTCTTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FWINNTLPTDGPSHPAVQVSLET*SAVLAT Trigger: CGTGGCAAGAACGGCAGACAAGGTTTCAAGAGATAC...CTGGACTGCTGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCCGTTCTTGCCACGTCTTCCAAAAATCTATAGTCACTCAGGAGATTCAAGAGCCAATTTCCTCTaGCTGCCCACTCGGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLPFLPRLPKIYSHSGDSRANFL*LPTRGF Trigger: GAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCT...TGAATCTCCTGAGTGACTATAGATTTTTGGAAGACGTGGCAAGAACGGCAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGGGACACAGACTCCACCTTTGGCTCCATCTGCATCCCGTGAGATGGAGTACTCAATGATCACTTaGTCCTTCAAGTTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSGTQTPPLAPSASREMEYSMIT*SFKLSE Trigger: TTCAGACAACTTGAAGGACAAAGTGATCATTGAGTA...CTCCATCTCACGGGATGCAGATGGAGCCAAAGGTGGAGTCTGTGTCCCTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACAGAGCCAATTTCCTCTaGCTGCCCACTCGGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLITFWINNTLPTDGPSHRANFL*LPTRGF Trigger: GAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCT...GTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | GACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAAACAGGTCCTTGTCTGCCGTTCTaGCCACGTCTTCCAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: DTGDPWAWSRDNLTNKTGPCLPF*PRLPKI Trigger: GATTTTTGGAAGACGTGGCAAGAACGGCAGACAAGG...ACCTGTTTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CAA 90 bp | CATATTAGCCAAATGAGCTGGCAGTTATATTTAGGTGAACTCCGGGAAGCAGAGCGCTGCATCCATCACTaGCTCTTCCTTTACGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HISQMSWQLYLGELREAERCIHH*LFLYVL Trigger: CAGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCG...CTCTGCTTCCCGGAGTTCACCTAAATATAACTGCCAGCTCATTTGGCTAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CAA 90 bp | TGCCGTTCTTGCCACGTCTTCCAAAAATCTATAGTCACTCAGGAGATTCATCTCAGGCAGCTCTGTACCTaGACAGAGCCAATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSCHVFQKSIVTQEIHLRQLCT*TEPISS Trigger: AGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCT...GAGATGAATCTCCTGAGTGACTATAGATTTTTGGAAGACGTGGCAAGAACGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS-3UTR CAA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCACACGTCAGGTCAGCTTaGTGTTTCTTTACACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LITFWINNTLPTDGPSHPHVRSA*CFFTQG Trigger: GCCCTGTGTAAAGAAACACAAAGCTGACCTGACGTG...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGACACAGGTGACCCTTGGGCTTGGTCTCGTGACAACTTAACAAATAAATTCTATGTACTCTGCTaGACTCTGAGGAAACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVDTGDPWAWSRDNLTNKFYVLC*TLRKLE Trigger: CTCCAGTTTCCTCAGAGTCAAGCAGAGTACATAGAA...TTTATTTGTTAAGTTGTCACGAGACCAAGCCCAAGGGTCACCTGTGTCAACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS TCA 90 bp | TCTTTTATAGGCGCTGCATCCATCACTTGCTCTTCCTTTACGTTCTaGCCAACAAACAACTCCTGTTTTATGGTCAAGTCCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFIGAASITCSSFTF*PTNNSCFMVKSSSF Trigger: GAAGGAGGAGGACTTGACCATAAAACAGGAGTTGTTTGTTGGTCAGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCACAAGTCTCACACCTaGACAGAGCCAATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLITFWINNTLPTDGPSHHKSHT*TEPISS Trigger: AGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTG...GTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | TTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACCCATTCTATGTACTCTGCTaGACTCTGAGGAAACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LITFWINNTLPTDGPSHPFYVLC*TLRKLE Trigger: CTCCAGTTTCCTCAGAGTCAAGCAGAGTACATAGAA...TGGGTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTAATTACTTTTTGGATAAACAACACACTACCCACTGACGGACCCAGTCACTACTCAATGATCACTTaGTCCTTCAAGTTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLITFWINNTLPTDGPSHYSMIT*SFKLSE Trigger: TTCAGACAACTTGAAGGACAAAGTGATCATTGAGTA...GTGACTGGGTCCGTCAGTGGGTAGTGTGTTGTTTATCCAAAAAGTAATTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000199033.5 |
||
| CDS CCA 72 bp | GCCGCAGGCCTCGGCCGCGCCCCCTCCGCTACCCTCTaGGAACCTCCTCCCGGAGTCCCTTCCTTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGLGRAPSATL*EPPPGVPSFSA Trigger: AGCTGAGAAGGAAGGGACTCCGGGAGGAGGTTCCCAGAGGGTAGCGGAGGGGGCGCGGCCGAGGCCTGCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS CCA 72 bp | CTCCATCGCCAGCTTCTGGGCTCCCGTCTAAGTCCCTaGCTCCCTCCCCACCAGCCGCAGGCCTCGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LHRQLLGSRLSP*LPPHQPQASAA Trigger: CGCGGCCGAGGCCTGCGGCTGGTGGGGAGGGAGCCAGGGACTTAGACGGGAGCCCAGAAGCTGGCGATGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS CCA 72 bp | GCCAATTTCCTCTTGCTGCCCACTCGGGGGTTCATCTaGGGCTCTTCCTTCACCTTCGCGTCTTCCATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ANFLLLPTRGFI*GSSFTFASSIA Trigger: AGCGATGGAAGACGCGAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000197940.5 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS GCA 72 bp | CTTTATCTCCTCCGCATCCTCCGTGGTCTTAGTTCCTaGCAGTCCGTTCCTCTCCTCTCCATCGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLLRILRGLSS*QSVPLLSIASF Trigger: GAAGCTGGCGATGGAGAGGAGAGGAACGGACTGGCAGGAACTAAGACCACGGAGGATGCGGAGGAGATAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS GCA 72 bp | AGGCAGCTCTGTACCTTGACAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCATCTGGGGCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RQLCTLTEPISS*CPLGGSSGALP Trigger: AGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS GCA 72 bp | CACAAGTCTCACACCTTGACAGAGCCAATTTCCTCTTaGTGCCCACTCGGGGGTTCATCTGGGGCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HKSHTLTEPISS*CPLGGSSGALP Trigger: AGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS GCA 72 bp | CAGCTCTGTACCTTGACAGAGCCAATTTCCTCTTGCTaGCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QLCTLTEPISSC*PLGGSSGALPS Trigger: TGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS CCA 72 bp | GCTGCATCCATCACTTGCTCTTCCTTTACGTTCCTCTaGGAACCTCCTCCCGGAGTCCCTTCCTTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASITCSSFTFL*EPPPGVPSFSA Trigger: AGCTGAGAAGGAAGGGACTCCGGGAGGAGGTTCCCAGAGGAACGTAAAGGAAGAGCAAGTGATGGATGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196413.5 |
||
| CDS CAA 90 bp | TCTTCTGTCCCACAAGTCTCACACCTTGACAGAGCCAATTTCCTCTaGCTGCCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSVPQVSHLDRANFL*LPTRGFIWGSSFTF Trigger: GAAGGTGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTGGGACAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 90 bp | GCTCTTGAGGGAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTaGCTCTTCCTTTACGTTCCTCTGGGAACCTCCTCCCGGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALEGTLFFYRRCIHH*LFLYVPLGTSSRSP Trigger: GGGACTCCGGGAGGAGGTTCCCAGAGGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTCCCTCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196413.5 |
||
| CDS GCA 72 bp | AAGTCTCACACCTTGACAGAGCCAATTTCCTCTTGCTaGCCACTCGGGGGTTCATCTGGGGCTCTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KSHTLTEPISSC*PLGGSSGALPS Trigger: TGAAGGAAGAGCCCCAGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 90 bp | ATCTGGGGCTCTTCCTTCACCTTCGCGTCTTCCATCGCTTCGCTCTaGAGGGAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IWGSSFTFASSIASL*REPSSFIGAASITC Trigger: GCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTCCCTCAAGAGCGAAGCGATGGAAGACGCGAAGGTGAAGGAAGAGCCCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 |
||
| CDS GCA 72 bp | GCAGCGACACATAAGCGGTCTTATCCCGGACTCCACTaGACGTCAGGTCAGCTTTGTGTTTCTTTACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AATHKRSYPGLH*TSGQLCVSLHR Trigger: CCTGTGTAAAGAAACACAAAGCTGACCTGACGTGCAGTGGAGTCCGGGATAAGACCGCTTATGTGTCGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 72 bp | TGTACTTCGCTTCTTCTGTCCCACAAGTCTCACACCTaGACAGAGCCAATTTCCTCTTGCTGCCCACTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTSLLLSHKSHT*TEPISSCCPLG Trigger: CCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTGGGACAGAAGAAGCGAAGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 90 bp | GTGGACATCTGTACTTCGCTTCTTCTGTCCCACAAGTCTCACACCTaGACAGAGCCAATTTCCTCTTGCTGCCCACTCGGGGGTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VDICTSLLLSHKSHT*TEPISSCCPLGGSS Trigger: AGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTGTGAGACTTGTGGGACAGAAGAAGCGAAGTACAGATGTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 90 bp | TACACAGGGCAAACTGAAGAAACAAACAGGAGGCAGCTCTGTACCTaGACAGAGCCAATTTCCTCTTGCTGCCCACTCGGGGGTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: YTGQTEETNRRQLCT*TEPISSCCPLGGSS Trigger: AGATGAACCCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTTTGTTTCTTCAGTTTGCCCTGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS TCA 72 bp | AAACTGAAGAAACAAACAGGAGGCAGCTCTGTACCTTaGCAGAGCCAATTTCCTCTTGCTGCCCACTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLKKQTGGSSVP*QSQFPLAAHSG Trigger: CCCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTTTGTTTCTTCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS GCA 72 bp | GAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTTaGTCTTCCTTTACGTTCCTCTGGGAACCTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EPSSFIGAASIT*SSFTFLWEPPP Trigger: GGGAGGAGGTTCCCAGAGGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196413.5 |
||
| CDS CAA 72 bp | GGAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTaGCTCTTCCTTTACGTTCCTCTGGGAACCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTLFFYRRCIHH*LFLYVPLGTSS Trigger: GGAGGAGGTTCCCAGAGGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196413.5 |
||
| CDS CAA 72 bp | CAAACTGAAGAAACAAACAGGAGGCAGCTCTGTACCTaGACAGAGCCAATTTCCTCTTGCTGCCCACTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QTEETNRRQLCT*TEPISSCCPLG Trigger: CCCGAGTGGGCAGCAAGAGGAAATTGGCTCTGTCAAGGTACAGAGCTGCCTCCTGTTTGTTTCTTCAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197940.5 |
||
| CDS GCA 72 bp | GTTTCTTTACACAGGGCAAACTGCAGGAAAAGCGCATaGAGCGTGGACATCTGTACTTCGCTTCTTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLHRANCRKSA*SVDICTSLLLS Trigger: GGACAGAAGAAGCGAAGTACAGATGTCCACGCTGCATGCGCTTTTCCTGCAGTTTGCCCTGTGTAAAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS CAA 72 bp | GTCTTATCCCGGACTCCACTGCACGTCAGGTCAGCTTaGTGTTTCTTTACACAGGGCAAACTGCAGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLSRTPLHVRSA*CFFTQGKLQEK Trigger: CTTTTCCTGCAGTTTGCCCTGTGTAAAGAAACACAAAGCTGACCTGACGTGCAGTGGAGTCCGGGATAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 ENSMUST00000200574.5 |
||
| CDS TCA 72 bp | GGCGCTGCATCCATCACTTGCTCTTCCTTTACGTTCTaGCCAACAAACAACTCCTGTTTTATGGTCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAASITCSSFTF*PTNNSCFMVKS Trigger: GGACTTGACCATAAAACAGGAGTTGTTTGTTGGTCAGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS TCA 72 bp | CTATGTACTCTGCTTGACTCTGAGGAAACTGGAGCTTaGCATGCCAACAAAACTGCTGCTTCCTATGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LCTLLDSEETGA*HANKTAASYGQ Trigger: TTGACCATAGGAAGCAGCAGTTTTGTTGGCATGTCAAGCTCCAGTTTCCTCAGAGTCAAGCAGAGTACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098534.9 ENSMUST00000196413.5 ENSMUST00000197604.3 ENSMUST00000199033.5 |
||
| CDS CAA 72 bp | GGAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTaGCTCTTCCTTTACGTTCTGACCAACAAACAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GTLFFYRRCIHH*LFLYVLTNKQL Trigger: GAGTTGTTTGTTGGTCAGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||
| CDS CAA 90 bp | GCTCTTGAGGGAACCCTCTTCTTTTATAGGCGCTGCATCCATCACTaGCTCTTCCTTTACGTTCTGACCAACAAACAACTCCTGTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALEGTLFFYRRCIHH*LFLYVLTNKQLLFY Trigger: ATAAAACAGGAGTTGTTTGTTGGTCAGAACGTAAAGGAAGAGCAAGTGATGGATGCAGCGCCTATAAAAGAAGAGGGTTCCCTCAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098534.9 |
||