RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNHIT2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075227

Ensembl transcript IDs: ENSMUST00000162726.5

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGGCGCCGTGCGCCCGGTAGCAGCGCAGCGAGCAGTAGGGAGCATTaGAGCGCGGGCAGGTGTAGCGCGCAGGCAGCGCTTCCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRRAPGSSAASSREH*SAGRCSAQAALPRP
Trigger: CGGCCGGGGAAGCGCTGCCTGCGCGCTACACCTGCCCGCGCTGCAATGCTCCCTACTGCTCGCTGCGCTGCTACCGGGCGCACGGCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp CCAAAGTCCAGAAAGGCCGCCCGGCCGCGCCCCGGGCCCGAGGCCTaGTTCCTCGGGCTCATCCTCGGCCTCGCGTTGTTCGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PKSRKAARPRPGPEA*FLGLILGLALFAQP
Trigger: CGGCTGCGCGAACAACGCGAGGCCGAGGATGAGCCCGAGGAAGCAGGCCTCGGGCCCGGGGCGCGGCCGGGCGGCCTTTCTGGACTTTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp CCTCGCGTTGTTCGCGCAGCCGGCGTAACGCGCCCGCCAGACGGCTaGGCGAAGCGCTTCGGCCACGGAGCTCTCGCAGCACTTGGTCGC +
Preference number: 5 (lower is better)
Translates to: PRVVRAAGVTRPPDG*AKRFGHGALAALGR
Trigger: GCGACCAAGTGCTGCGAGAGCTCCGTGGCCGAAGCGCTTCGCCCAGCCGTCTGGCGGGCGCGTTACGCCGGCTGCGCGAACAACGCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp CTCTGTTCGCGGCATGATCCAGCTCCTCCAGCAAACGTGGGCCGGTaGCGCGGCCCCACCACCAGGGCCGCCACGGAGGCAGAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: LCSRHDPAPPANVGR*RGPTTRAATEAEGV
Trigger: GACGCCTTCTGCCTCCGTGGCGGCCCTGGTGGTGGGGCCGCGGCACCGGCCCACGTTTGCTGGAGGAGCTGGATCATGCCGCGAACAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp CGCAAGATCTCTGTTCGCGGCATGATCCAGCTCCTCCAGCAAACGTaGGCCGGTGCCGCGGCCCCACCACCAGGGCCGCCACGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RKISVRGMIQLLQQT*AGAAAPPPGPPRRQ
Trigger: CTGCCTCCGTGGCGGCCCTGGTGGTGGGGCCGCGGCACCGGCCCACGTTTGCTGGAGGAGCTGGATCATGCCGCGAACAGAGATCTTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp GCAGCTGGAAGCGCACCAGCGGCGATGCCGGGCTGCGGCTCAGACTaGCCAGTGCTGGGATGCGAGCAGGCAATGCTAGCGGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AAGSAPAAMPGCGSD*PVLGCEQAMLAVWR
Trigger: CCGCCAGACCGCTAGCATTGCCTGCTCGCATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp TCGGGCAACTTCTTGCATAGCACCCCGCGTACCCAGGGGCCCAGGTaGGTGCTCGCCCGCTTCCAGTACGTGGGCTGCGGCCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SGNFLHSTPRTQGPR*VLARFQYVGCGLQG
Trigger: GCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGGCCCCTGGGTACGCGGGGTGCTATGCAAGAAGTTGCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp GTAGGCGAACAGCACGTTGGGCAGCTGGAAGCGCACCAGCGGCGATaGCGGGCTGCGGCTCAGACTGGCCAGTGCTGGGATGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VGEQHVGQLEAHQRR*RAAAQTGQCWDASR
Trigger: CCTGCTCGCATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGCCCAACGTGCTGTTCGCCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp GCAACTTCTTGCATAGCACCCCGCGTACCCAGGGGCCCAGGTGGGTaGTCGCCCGCTTCCAGTACGTGGGCTGCGGCCTGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: ATSCIAPRVPRGPGG*SPASSTWAAACRAS
Trigger: GGAAGCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGGCCCCTGGGTACGCGGGGTGCTATGCAAGAAGTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp ACCCAGGGGCCCAGGTGGGTGCTCGCCCGCTTCCAGTACGTGGGCTaGGGCCTGCAGGGCTTCCTCTGTAGAGCCAAAGACTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQGPRWVLARFQYVG*GLQGFLCRAKDLLG
Trigger: GCCCAGCAAGTCTTTGGCTCTACAGAGGAAGCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGGCCCCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp CGCGTACCCAGGGGCCCAGGTGGGTGCTCGCCCGCTTCCAGTACGTaGGCTGCGGCCTGCAGGGCTTCCTCTGTAGAGCCAAAGACTTGC +
Preference number: 5 (lower is better)
Translates to: RVPRGPGGCSPASST*AAACRASSVEPKTC
Trigger: GCAAGTCTTTGGCTCTACAGAGGAAGCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGGCCCCTGGGTACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 90 bp ACAGCACGTTGGGCAGCTGGAAGCGCACCAGCGGCGATGCCGGGCTaGGGCTCAGACTGGCCAGTGCTGGGATGCGAGCAGGCAATGCTA +
Preference number: 5 (lower is better)
Translates to: TARWAAGSAPAAMPG*GSDWPVLGCEQAML
Trigger: TAGCATTGCCTGCTCGCATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGCCCAACGTGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp CTCCATGATACAGGGCGAGAGTATGAGCGTAGGCGAACAGCACGTTaGGCAGCTGGAAGCGCACCAGCGGCGATGCCGGGCTGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: LHDTGREYERRRTAR*AAGSAPAAMPGCGS
Trigger: TGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGCCCAACGTGCTGTTCGCCTACGCTCATACTCTCGCCCTGTATCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp CCAGTAAGCGTTGCCATCTCCTCAGCTGTCACAGCATGGGCTCGGTaGGCTCTGGCACAGTCTAGCGCCAGGGGTGTGAGGGCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PVSVAISSAVTAWAR*ALAQSSARGVRAAS
Trigger: CGAGGCTGCCCTCACACCCCTGGCGCTAGACTGTGCCAGAGCCCACCGAGCCCATGCTGTGACAGCTGAGGAGATGGCAACGCTTACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 90 bp TGGGCTGCGGCCTGCAGGGCTTCCTCTGTAGAGCCAAAGACTTGCTaGGCTCCCAGGGCCCCAGAAACATCGAGCAGGGTGGCACAGAAG +
Preference number: 5 (lower is better)
Translates to: WAAACRASSVEPKTC*APRAPETSSRVAQK
Trigger: CTTCTGTGCCACCCTGCTCGATGTTTCTGGGGCCCTGGGAGCCCAGCAAGTCTTTGGCTCTACAGAGGAAGCCCTGCAGGCCGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp GTTCGCGCAGCCGGCGTAACGCGCCCGCCAGACGGCTaGGCGAAGCGCTTCGGCCACGGAGCTCTCGCAGCA +
Preference number: 6 (lower is better)
Translates to: VRAAGVTRPPDG*AKRFGHGALAA
Trigger: TGCTGCGAGAGCTCCGTGGCCGAAGCGCTTCGCCCAGCCGTCTGGCGGGCGCGTTACGCCGGCTGCGCGAAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 72 bp GCGCCCGGTAGCAGCGCAGCGAGCAGTAGGGAGCATTaGAGCGCGGGCAGGTGTAGCGCGCAGGCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: APGSSAASSREH*SAGRCSAQAAL
Trigger: AAGCGCTGCCTGCGCGCTACACCTGCCCGCGCTGCAATGCTCCCTACTGCTCGCTGCGCTGCTACCGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 72 bp CAGCACGTTGGGCAGCTGGAAGCGCACCAGCGGCGATaGCGGGCTGCGGCTCAGACTGGCCAGTGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: QHVGQLEAHQRR*RAAAQTGQCWD
Trigger: ATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGCCCAACGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CAA 72 bp AGCAAATGGCTCTGCGGCAGCGGCATCATCCCCAGATaGCAGCGCGGTCCTCGCAGGGGCGGGCTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SKWLCGSGIIPR*QRGPRRGGLRL
Trigger: GAGCCGGAGCCCGCCCCTGCGAGGACCGCGCTGCAATCTGGGGATGATGCCGCTGCCGCAGAGCCATTTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 72 bp ATGCCGGGCTGCGGCTCAGACTGGCCAGTGCTGGGATaGGAGCAGGCAATGCTAGCGGTCTGGCGGCACAGG +
Preference number: 6 (lower is better)
Translates to: MPGCGSDWPVLG*EQAMLAVWRHR
Trigger: CCTGTGCCGCCAGACCGCTAGCATTGCCTGCTCGCATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CAA 90 bp GGAGTCTTCAGCAAATGGCTCTGCGGCAGCGGCATCATCCCCAGATaGCAGCGCGGTCCTCGCAGGGGCGGGCTCCGGCTCCGCAAGATC +
Preference number: 6 (lower is better)
Translates to: GVFSKWLCGSGIIPR*QRGPRRGGLRLRKI
Trigger: GATCTTGCGGAGCCGGAGCCCGCCCCTGCGAGGACCGCGCTGCAATCTGGGGATGATGCCGCTGCCGCAGAGCCATTTGCTGAAGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 72 bp CCCAGGTGGGTGCTCGCCCGCTTCCAGTACGTGGGCTaGGGCCTGCAGGGCTTCCTCTGTAGAGCCAAAGAC +
Preference number: 6 (lower is better)
Translates to: PRWVLARFQYVG*GLQGFLCRAKD
Trigger: GTCTTTGGCTCTACAGAGGAAGCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS GCA 72 bp ACTGGACCCTCGCCCAGCAGGATTCGGGCAACTTCTTaGATAGCACCCCGCGTACCCAGGGGCCCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: TGPSPSRIRATS*IAPRVPRGPGG
Trigger: CCCACCTGGGCCCCTGGGTACGCGGGGTGCTATGCAAGAAGTTGCCCGAATCCTGCTGGGCGAGGGTCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp ACAGGGCGAGAGTATGAGCGTAGGCGAACAGCACGTTaGGCAGCTGGAAGCGCACCAGCGGCGATGCCGGGC +
Preference number: 6 (lower is better)
Translates to: TGREYERRRTAR*AAGSAPAAMPG
Trigger: GCCCGGCATCGCCGCTGGTGCGCTTCCAGCTGCCCAACGTGCTGTTCGCCTACGCTCATACTCTCGCCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CAA 72 bp GACTGGACCCTCGCCCAGCAGGATTCGGGCAACTTCTaGCATAGCACCCCGCGTACCCAGGGGCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: DWTLAQQDSGNF*HSTPRTQGPRW
Trigger: CCACCTGGGCCCCTGGGTACGCGGGGTGCTATGCAAGAAGTTGCCCGAATCCTGCTGGGCGAGGGTCCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp GTTGCCATCTCCTCAGCTGTCACAGCATGGGCTCGGTaGGCTCTGGCACAGTCTAGCGCCAGGGGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: VAISSAVTAWAR*ALAQSSARGVR
Trigger: CCTCACACCCCTGGCGCTAGACTGTGCCAGAGCCCACCGAGCCCATGCTGTGACAGCTGAGGAGATGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp GCCTGCAGGGCTTCCTCTGTAGAGCCAAAGACTTGCTaGGCTCCCAGGGCCCCAGAAACATCGAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ACRASSVEPKTC*APRAPETSSRV
Trigger: CACCCTGCTCGATGTTTCTGGGGCCCTGGGAGCCCAGCAAGTCTTTGGCTCTACAGAGGAAGCCCTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp CCAGTAAGCGTTGCCATCTCCTCAGCTGTCACAGCATaGGCTCGGTGGGCTCTGGCACAGTCTAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: PVSVAISSAVTA*ARWALAQSSAR
Trigger: CCTGGCGCTAGACTGTGCCAGAGCCCACCGAGCCCATGCTGTGACAGCTGAGGAGATGGCAACGCTTACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CAA 72 bp TCTAGCGCCAGGGGTGTGAGGGCAGCCTCGTTTTCGTaGGTCCAAGCCAGCAGGAACTGGCACTTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: SSARGVRAASFS*VQASRNWHFFR
Trigger: TCGGAAGAAGTGCCAGTTCCTGCTGGCTTGGACCAACGAAAACGAGGCTGCCCTCACACCCCTGGCGCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS TCA 72 bp GGTGCCCCAGTGCTGTCAGAGTGTAGCCTTTCTGATTaGCTGGACCCTCGCCCAGCAGGATTCGGGCAACTT +
Preference number: 6 (lower is better)
Translates to: GAPVLSECSLSD*LDPRPAGFGQL
Trigger: AAGTTGCCCGAATCCTGCTGGGCGAGGGTCCAGTCAATCAGAAAGGCTACACTCTGACAGCACTGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5
CDS CCA 72 bp CCCCAGTGCTGTCAGAGTGTAGCCTTTCTGATTGACTaGACCCTCGCCCAGCAGGATTCGGGCAACTTCTTG +
Preference number: 6 (lower is better)
Translates to: PQCCQSVAFLID*TLAQQDSGNFL
Trigger: CAAGAAGTTGCCCGAATCCTGCTGGGCGAGGGTCCAGTCAATCAGAAAGGCTACACTCTGACAGCACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162726.5