Pregenerated sensors for ZNHIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059518Ensembl transcript IDs: ENSMUST00000034953.14, ENSMUST00000085941.12, ENSMUST00000111090.9, ENSMUST00000156963.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTaGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLSQHSVDGPPPQQS*VPVAFLGRQGTALL Trigger: CAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CCA 90 bp | AGGCAGGCTTCCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTaGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: RQASFHQAVYYHSTL*MDHPHNSPGSLWPS Trigger: GGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAGGAAGCCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156963.8 |
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| 3UTR TCA 90 bp | GGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTaGATGGGTAGTTTCTCCCTCTCTCTGTCCTTTGTGAATGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: GPCGLPWSAGHSFAG*MGSFSLSLSFVNEL Trigger: CAGCTCATTCACAAAGGACAGAGAGAGGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CCA 90 bp | CTGCAGAAAGAGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTaGGATGCTACATGGAATAAGACTGTAGGCATGGCTGGGTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LQKEREKPIGEGGRS*DATWNKTVGMAGSG Trigger: GCCTGACCCAGCCATGCCTACAGTCTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCTCTTTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| 3UTR-3UTR CCA 90 bp | GGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCGAAGGAGGGAGGTCCTaGGATGCTACATGGAATAAG | + |
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Preference number: 2 (lower is better) Translates to: GPPPQQSWVPVAFLGRQGEGGRS*DATWNK Trigger: CTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTC...GCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034953.14 |
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| 3UTR-3UTR TCA 90 bp | GTGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGTCTCTCTGTCCTTTGTaGATGAGCTGGGGTGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VDGPPPQQSWVPVAFLGRSLCPL*MSWGGL Trigger: CAACCCACCCCAGCTCATTCACAAAGGACAGAGAGA...CCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTCTCTCTGTCCTTTGTaGATGAGCTGGGGTGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PHNSPGSLWPSLVGRAQLSLCPL*MSWGGL Trigger: CAACCCACCCCAGCTCATTCACAAAGGACAGAGAGA...AAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTGAATGGGTAGTTTCTCCCGTGGGTTGGGAAGGGTaGGGGTACTTTCTCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AFLGRQGTALLGEWVVSPVGWEG*GYFLSL Trigger: CAGGGAGAGAAAGTACCCCCACCCTTCCCAACCCAC...GGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGAAGGGTGGGGGTACTTTCTCTCCCTGATGCCAGGTTTACACGGTCCAGAGAGAGAAGCCCATTaGAGAAGGAGGGAGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GWEGWGYFLSLMPGLHGPEREAH*RRREVL Trigger: CAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTC...TGGACCGTGTAAACCTGGCATCAGGGAGAGAAAGTACCCCCACCCTTCCCAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGAAGGGTGGGGGTACTTTCTCTCCCTGATGCCAGGTTTACACGGTCCAGAAGGAGGGAGGTCCTaGGATGCTACATGGAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: GWEGWGYFLSLMPGLHGPEGGRS*DATWNK Trigger: CTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTC...TGGACCGTGTAAACCTGGCATCAGGGAGAGAAAGTACCCCCACCCTTCCCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTGAATGGGTAGTTTCTCCCTCTTCCACTTCAGACACCTaGAGAAAGAGAGAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FLGRQGTALLGEWVVSPSSTSDT*RKRERS Trigger: GCTTCTCTCTCTCTTTCTGCAGGTGTCTGAAGTGGA...AGAGGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034953.14 |
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| 3UTR CCA 72 bp | TGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTaGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: WMDHPHNSPGSL*PSLVGRAQLCW Trigger: CCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CCA 72 bp | CAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTaGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACA | + |
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Preference number: 3 (lower is better) Translates to: QHSVDGPPPQQS*VPVAFLGRQGT Trigger: TGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR TCA 72 bp | GGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTaGATGGGTAGTTTCTCCCTCTCTCTGTCCTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: GLPWSAGHSFAG*MGSFSLSLSFV Trigger: CACAAAGGACAGAGAGAGGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CCA 72 bp | CCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATaGAATAAGACTGTAGGCATGGCTGGGTCAGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: PIGEGGRSWDAT*NKTVGMAGSGS Trigger: CGAGCCTGACCCAGCCATGCCTACAGTCTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| 3UTR CCA 72 bp | TTCACCAGGCCGTTTATTATCACAGCACTCTGTGGATaGACCACCCCCACAACAGTCCTGGGTCCCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FTRPFIITALCG*TTPTTVLGPCG Trigger: GCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCGGCAGGGCACAGCTTaGCTGGGTGAATGGGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: HQAVYYHSTLWMDHPHNSRQGTA*LGEWVV Trigger: AACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCG...ACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR-3UTR CAA 90 bp | TCACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGCGGCAGGGCACAGCTTaGCTGGGTGAATGGGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: SPGRLLSQHSVDGPPPQQRQGTA*LGEWVV Trigger: AACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCG...CTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CCA 72 bp | TCCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTaGATGGACCACCCCCACAACAGTCCTGGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SFHQAVYYHSTL*MDHPHNSPGSL Trigger: CAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR GCA 72 bp | CCTGATGCCAGGTTTACACGGTCCACTTCAGACACCTaGAGAAAGAGAGAGAGAAGCCCATTGGAGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PDARFTRSTSDT*RKRERSPLEKE Trigger: CTCCTTCTCCAATGGGCTTCTCTCTCTCTTTCTGCAGGTGTCTGAAGTGGACCGTGTAAACCTGGCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| 3UTR CCA 72 bp | GAGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTaGGATGCTACATGGAATAAGACTGTAGGCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: EREKPIGEGGRS*DATWNKTVGMA Trigger: AGCCATGCCTACAGTCTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR GCA 90 bp | GGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCGTTGGGGCCCTCAGATaGACTCAGGTTCTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GPPPQQSWVPVAFLGRQGVGALR*TQVLLL Trigger: GAGGAGCAGAACCTGAGTGCATCTGAGGGCCCCAAC...GCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CAA 72 bp | CACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTaGGTCGGCAGGGCACAGCTTTGCTGGGTGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: HPHNSPGSLWPS*VGRAQLCWVNG Trigger: CCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | CAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTGTTGGGGCCCTCAGATaGACTCAGGTTCTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QSWVPVAFLGRQGTALLGVGALR*TQVLLL Trigger: GAGGAGCAGAACCTGAGTGCATCTGAGGGCCCCAAC...ACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR TCA 90 bp | GCCTTCCTTGGTCGGCAGGGCACAGCTTTGCTGGGTGAATGGGTAGTTTCTCCCAGACACCTGGTCTCCTaGTGGGTACCCAGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: AFLGRQGTALLGEWVVSPRHLVS*WVPRQR Trigger: GCGCTGCCTGGGTACCCATCAGGAGACCAGGTGTCT...GGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | GGTTGGGAAGGGTGGGGGTACTTTCTCTCCCTGATGCCAGGTTTACACGGTCCAACTGAGGTAGCCTCTTaGCCAGCTGGGGGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GWEGWGYFLSLMPGLHGPTEVAS*PAGGGR Trigger: CCGGCCTCCCCCAGCTGGGCAAGAGGCTACCTCAGT...TGGACCGTGTAAACCTGGCATCAGGGAGAGAAAGTACCCCCACCCTTCCCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR CCA 90 bp | CCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAAGGCTGTCAAGTAGTTaGGGCCCTCAGATGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: PPPQQSWVPVAFLGRQGTRLSSS*GPQMHS Trigger: TGAGTGCATCTGAGGGCCCCAACTACTTGACAGCCT...TGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | TGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGTCCACTTCAGACACCTaGTCTCCTGATGGGTACCCA | + |
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Preference number: 4 (lower is better) Translates to: WTTPTTVLGPCGLPWSAGSTSDT*SPDGYP Trigger: TGGGTACCCATCAGGAGACCAGGTGTCTGAAGTGGA...CCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR TCA 90 bp | CCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTGCATCATCATCAAACTaGGGTAGCCTCTTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHNSPGSLWPSLVGRAQLASSSN*GSLLPS Trigger: GCTGGGCAAGAGGCTACCTCAGTTTGATGATGATGC...AAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR TCA 90 bp | CCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCATCATCATCAAACTaGGGTAGCCTCTTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PTTVLGPCGLPWSAGHSFASSSN*GSLLPS Trigger: GCTGGGCAAGAGGCTACCTCAGTTTGATGATGATGC...AAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | GTGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGTCCTCCAGCAAAGCCTaGAAGTTTTTCCGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VDGPPPQQSWVPVAFLGRSSSKA*KFFRKR Trigger: TCGCTTCCGGAAAAACTTCCAGGCTTTGCTGGAGGA...CCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| 3UTR CAA 72 bp | GTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTaGCTGGGTGAATGGGTAGTTTCTCCCTCTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPVAFLGRQGTA*LGEWVVSPSLC Trigger: ACAGAGAGAGGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | CACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGTTTCTTTCCTGTGTCTaGATCATCATCAAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HPHNSPGSLWPSLVGRAQFLSCV*IIIKLR Trigger: CCTCAGTTTGATGATGATGCAGACACAGGAAAGAAA...CTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGGAATAAGACTGTAGGCGTTGGGGCCCTCAGATaGACTCAGGTTCTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PIGEGGRSWDATWNKTVGVGALR*TQVLLL Trigger: GAGGAGCAGAACCTGAGTGCATCTGAGGGCCCCAAC...GCCTACAGTCTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR GCA 90 bp | TTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTCCCGATGCACTCAGGTTCTaGTCCTCCAGCAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FIITALCGWTTPTTVLGPDALRF*SSSKAW Trigger: CCAGGCTTTGCTGGAGGAGCAGAACCTGAGTGCATC...GGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | GGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAAAGCGAAGTTTAAAGTaGTCACCTCGAGTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GWTTPTTVLGPCGLPWSAKRSLK*SPRVFF Trigger: GAAGAAAACTCGAGGTGACCACTTTAAACTTCGCTT...TGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGGGTGGGGGTACTTTCTCTCCCTGATGCCAGGTTTACACGGTCCACTTAGGCTGTCAAGTAGTTaGGGCCCTCAGATGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: WEGWGYFLSLMPGLHGPLRLSSS*GPQMHS Trigger: TGAGTGCATCTGAGGGCCCCAACTACTTGACAGCCT...AAGTGGACCGTGTAAACCTGGCATCAGGGAGAGAAAGTACCCCCACCCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR TCA 90 bp | CTCCCTGATGCCAGGTTTACACGGTCCACTTCAGACACCTGCAGAAAGAGAGAGGCATCATCATCAAACTaGGGTAGCCTCTTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPDARFTRSTSDTCRKREASSSN*GSLLPS Trigger: GCTGGGCAAGAGGCTACCTCAGTTTGATGATGATGC...CTCTCTCTTTCTGCAGGTGTCTGAAGTGGACCGTGTAAACCTGGCATCAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR TCA 90 bp | CACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTGCATCATCATCAAACTaGGGTAGCCTCTTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HQAVYYHSTLWMDHPHNSASSSN*GSLLPS Trigger: GCTGGGCAAGAGGCTACCTCAGTTTGATGATGATGC...ACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGGAATAGATGCACTCAGGTTCTaGTCCTCCAGCAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RERSPLEKEGGPGMLHGIDALRF*SSSKAW Trigger: CCAGGCTTTGCTGGAGGAGCAGAACCTGAGTGCATC...TATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR GCA 90 bp | CTTTCACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAAGATGCACTCAGGTTCTaGTCCTCCAGCAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSPGRLLSQHSVDGPPPQDALRF*SSSKAW Trigger: CCAGGCTTTGCTGGAGGAGCAGAACCTGAGTGCATC...TTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | GAGAAGCCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGGAATAAGACTGATGCACTCAGGTTCTaGTCCTCCAGCAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EKPIGEGGRSWDATWNKTDALRF*SSSKAW Trigger: CCAGGCTTTGCTGGAGGAGCAGAACCTGAGTGCATC...AGTCTTATTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR GCA 90 bp | CAGAATGAGCAGGCAGGCTTCCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTTGGGGCCCTCAGATaGACTCAGGTTCTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QNEQAGFLSPGRLLSQHSVGALR*TQVLLL Trigger: GAGGAGCAGAACCTGAGTGCATCTGAGGGCCCCAAC...AGAGTGCTGTGATAATAAACGGCCTGGTGAAAGGAAGCCTGCCTGCTCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | CACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGGTCGGCAGGGCACAGCTTTGCAAGCGAAGTTTAAAGTaGTCACCTCGAGTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HNSPGSLWPSLVGRAQLCKRSLK*SPRVFF Trigger: GAAGAAAACTCGAGGTGACCACTTTAAACTTCGCTT...GCAAAGCTGTGCCCTGCCGACCAAGGAAGGCCACAGGGACCCAGGACTGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCAGGCTGTCAAGTAGTTaGGGCCCTCAGATGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LPFTRPFIITALCGWTTPRLSSS*GPQMHS Trigger: TGAGTGCATCTGAGGGCCCCAACTACTTGACAGCCT...GGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | CCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTTCCACTTCAGACACCTaGTCTCCTGATGGGTACCCA | + |
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Preference number: 4 (lower is better) Translates to: PFIITALCGWTTPTTVLGSTSDT*SPDGYP Trigger: TGGGTACCCATCAGGAGACCAGGTGTCTGAAGTGGA...ACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | TATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGGTTGTCATTCTCCAATaGCTCCAGCTGTCGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: YYHSTLWMDHPHNSPGSLVVILQ*LQLSVD Trigger: ATCAACCGACAGCTGGAGGCATTGGAGAATGACAAC...CAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | ACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTGGCCTTCCTTGTTTCTTTCCTGTGTCTaGATCATCATCAAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TLWMDHPHNSPGSLWPSLFLSCV*IIIKLR Trigger: CCTCAGTTTGATGATGATGCAGACACAGGAAAGAAA...CAAGGAAGGCCACAGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | TTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTCCCTGTTGTCATTCTCCAATaGCTCCAGCTGTCGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LLSQHSVDGPPPQQSWVPVVILQ*LQLSVD Trigger: ATCAACCGACAGCTGGAGGCATTGGAGAATGACAAC...AGGGACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | CCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAGTTGTCATTCTCCAATaGCTCCAGCTGTCGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PFTRPFIITALCGWTTPTVVILQ*LQLSVD Trigger: ATCAACCGACAGCTGGAGGCATTGGAGAATGACAAC...TGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | GAAAGAGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGGTTGTCATTCTCCAATaGCTCCAGCTGTCGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: EREREAHWRRREVLGCYMVVILQ*LQLSVD Trigger: ATCAACCGACAGCTGGAGGCATTGGAGAATGACAAC...CATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR GCA 90 bp | CGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTCTTTCTTTCCTGTGTCTaGATCATCATCAAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RLLSQHSVDGPPPQQSWVFLSCV*IIIKLR Trigger: CCTCAGTTTGATGATGATGCAGACACAGGAAAGAAA...GACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGGAATTTCTTTCCTGTGTCTaGATCATCATCAAACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: REREAHWRRREVLGCYMEFLSCV*IIIKLR Trigger: CCTCAGTTTGATGATGATGCAGACACAGGAAAGAAA...TTCCATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR CCA 90 bp | CCTTTCACCAGGCCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAAAGCGAAGTTTAAAGTaGTCACCTCGAGTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PFTRPFIITALCGWTTPTKRSLK*SPRVFF Trigger: GAAGAAAACTCGAGGTGACCACTTTAAACTTCGCTT...TGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGGCCTGGTGAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAGAGAGAAGCCCATTGGAGAAGGAGGGAGGTCCTGGGATGCTACATGAAGCGAAGTTTAAAGTaGTCACCTCGAGTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EREREAHWRRREVLGCYMKRSLK*SPRVFF Trigger: GAAGAAAACTCGAGGTGACCACTTTAAACTTCGCTT...CATGTAGCATCCCAGGACCTCCCTCCTTCTCCAATGGGCTTCTCTCTCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR CAA 90 bp | AGGTCCTGGGATGCTACATGGAATAAGACTGTAGGCATGGCTGGGTCAGGCTCGGCCTCCAGCTGTCGGTaGATCCGCCGCTGCCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSWDATWNKTVGMAGSGSASSCR*IRRCLA Trigger: AGCCAGGCAGCGGCGGATCAACCGACAGCTGGAGGC...CGAGCCTGACCCAGCCATGCCTACAGTCTTATTCCATGTAGCATCCCAGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034953.14 ENSMUST00000111090.9 |
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| CDS-3UTR CAA 90 bp | CCGTTTATTATCACAGCACTCTGTGGATGGACCACCCCCACAACAGTCCTGGGTGCCTCCAGCTGTCGGTaGATCCGCCGCTGCCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PFIITALCGWTTPTTVLGASSCR*IRRCLA Trigger: AGCCAGGCAGCGGCGGATCAACCGACAGCTGGAGGC...ACCCAGGACTGTTGTGGGGGTGGTCCATCCACAGAGTGCTGTGATAATAAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCACAGCTTTGCTGGGTGAATGGGTAGTTTCTCCCTCTCTCTGTCCTTTGGCCTCCAGCTGTCGGTaGATCCGCCGCTGCCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QGTALLGEWVVSPSLCPLASSCR*IRRCLA Trigger: AGCCAGGCAGCGGCGGATCAACCGACAGCTGGAGGC...CAAAGGACAGAGAGAGGGAGAAACTACCCATTCACCCAGCAAAGCTGTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034953.14 ENSMUST00000085941.12 ENSMUST00000156963.8 |
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