Pregenerated sensors for ZMYND19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026974Ensembl transcript IDs: ENSMUST00000028350.9, ENSMUST00000148042.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGGGCACTGTCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATaGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: GGALSPQAACCCEVL*QLLWIHCWLLWHLQ Trigger: CTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAGTGCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR GCA 90 bp | CACTGTCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTaGTCTGGATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: HCPHRLLVAVRSYGS*SGSIAGFFGTSRFN Trigger: GTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR GCA 90 bp | CTGATGGAGCCCATCTCACTGCACAGCAGCAGCTGTGCTAGCATGTaGAGATTTGATGGGGAAAACCCACAGGCAAGCCCAGGGTATACC | + |
|
Preference number: 1 (lower is better) Translates to: LMEPISLHSSSCASM*RFDGENPQASPGYT Trigger: GGTATACCCTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGCTGCTGTGCAGTGAGATGGGCTCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 90 bp | TGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATaGGGAGCTGGAAACTTTGAACCTGCAGCAGTGGCAGCTCTTCAG | + |
|
Preference number: 1 (lower is better) Translates to: WHLQVQLTVCLPLCS*GAGNFEPAAVAALQ Trigger: CTGAAGAGCTGCCACTGCTGCAGGTTCAAAGTTTCCAGCTCCTCATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 90 bp | TCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTaGATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACA | + |
|
Preference number: 1 (lower is better) Translates to: SPQAACCCEVLWQLL*IHCWLLWHLQVQLT Trigger: TGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 90 bp | TGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTaGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: CEVLWQLLWIHCWLL*HLQVQLTVCLPLCS Trigger: TGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 90 bp | GCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTaGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCG | + |
|
Preference number: 1 (lower is better) Translates to: ACCCEVLWQLLWIHC*LLWHLQVQLTVCLP Trigger: CGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR TCA 90 bp | TGCTCTGGATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTaGCAGTCTGTCTTCCGCTGTGCTCATGAGGAGCTGGAAACTTTG | + |
|
Preference number: 1 (lower is better) Translates to: CSGSIAGFFGTSRFN*QSVFRCAHEELETL Trigger: CAAAGTTTCCAGCTCCTCATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR GCA 90 bp | GCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTaGTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: AACCCEVLWQLLWIH*WLLWHLQVQLTVCL Trigger: AAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR TCA 90 bp | GGCTGGCAATCCTGGGCACTACAAGAAGTTAGGCTGAGCAAGATATaGAGAGCAAACAGTAAGCAGTCCTCCATGGCCTCTGCATCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: GWQSWALQEVRLSKI*RANSKQSSMASASA Trigger: AGCTGATGCAGAGGCCATGGAGGACTGCTTACTGTTTGCTCTTCATATCTTGCTCAGCCTAACTTCTTGTAGTGCCCAGGATTGCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 90 bp | GCATCAGAACCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTAGAAGTGCAGTCAGTGCTCATA | + |
|
Preference number: 1 (lower is better) Translates to: ASEPITDGCEPPCGC*ELNSGPLEVQSVLI Trigger: TATGAGCACTGACTGCACTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGTTCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR GCA 90 bp | GCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTGCTTGAACGTGTaGTTGAAATTTACCAACATAGGGATATATAGTACTTTGCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: AAAYYWLQGSLCLNV*LKFTNIGIYSTLLA Trigger: AGCCAGCAAAGTACTATATATCCCTATGTTGGTAAATTTCAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 90 bp | CCCCACTGTCCAAGAGAGAAGCTTGACTACACGACAGTCTCTAGCTaGGTGGTGACTGTTTACCATTTGAGGAATACAACAAATGATTCT | + |
|
Preference number: 1 (lower is better) Translates to: PHCPREKLDYTTVSS*VVTVYHLRNTTNDS Trigger: AGAATCATTTGTTGTATTCCTCAAATGGTAAACAGTCACCACTCAGCTAGAGACTGTCGTGTAGTCAAGCTTCTCTCTTGGACAGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 90 bp | CCTGAGATAGGTAAGATTCCAGCCATGGTGAATTCACTTCTGCAGTaGTCAAGATGCCAAATGAAAAACAGCCCTCAGACATGTGAATCC | + |
|
Preference number: 1 (lower is better) Translates to: PEIGKIPAMVNSLLQ*SRCQMKNSPQTCES Trigger: GGATTCACATGTCTGAGGGCTGTTTTTCATTTGGCATCTTGATCACTGCAGAAGTGAATTCACCATGGCTGGAATCTTACCTATCTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 90 bp | GACAGACCCAACAGACAACAATTTCGTTTTAGTCCATCCAGTTTTTaGCACTTCGTTACAGCAGCTCCAGGAAGCAAATTCATAGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: DRPNRQQFRFSPSSF*HFVTAAPGSKFIGH Trigger: GTGTCCTATGAATTTGCTTCCTGGAGCTGCTGTAACGAAGTGCCAAAAACTGGATGGACTAAAACGAAATTGTTGTCTGTTGGGTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATAGGAGCTGGAAACTTTaGACCTGCAGCAGTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SPQAACCCEVLWQLLWIHRSWKL*TCSSGS Trigger: GCTGCCACTGCTGCAGGTTCAAAGTTTCCAGCTCCT...ATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAATTGGGACAGGGGCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTGCCATTGCTGGCTTCTTTaGCACCTCCAGGTTCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PTIGTGAAAYYWLQGSLCHCWLL*HLQVQL Trigger: CAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATG...GCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCCTGTCCCAATTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CAA 90 bp | AGCCCATCTCACTGCACAGCAGCAGCTGTGCTAGCATGTGCAGATTaGATGGGGAAAACCCACAGGCAAGCCCAGGGTATACCAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: SPSHCTAAAVLACAD*MGKTHRQAQGIPEP Trigger: AGGTTCTGGTATACCCTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGCTGCTGTGCAGTGAGATGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATGAGGAGCTGGAAACTTTaGACCTGCAGCAGTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASLAPPGSTDSLSSAVLMRSWKL*TCSSGS Trigger: GCTGCCACTGCTGCAGGTTCAAAGTTTCCAGCTCCT...CATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCCTTCCGCTGTGCTCATaGGGAGCTGGAAACTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PQAACCCEVLWQLLWIHCLPLCS*GAGNFE Trigger: TTCAAAGTTTCCAGCTCCTCATGAGCACAGCGGAAG...GCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCCTTCCGCTGTGCTCATaGGGAGCTGGAAACTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: AVRSYGSCSGSIAGFFGTLPLCS*GAGNFE Trigger: TTCAAAGTTTCCAGCTCCTCATGAGCACAGCGGAAG...GGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGACCTCCAGGTTCAACTaGCAGTCTGTCTTCCGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CCCEVLWQLLWIHCWLLWTSRFN*QSVFRC Trigger: ACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGT...CCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAACCCACAATTGGGACAGGGGCAGCAGCTTACTACTGGCTCCAAGGGTCTCTTGTGAAACAGTAAGCTaGAATAATCCCTCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PTHNWDRGSSLLLAPRVSCETVS*NNPSFP Trigger: TGGGAAGGAGGGATTATTTCAGCTTACTGTTTCACA...AGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCCTGTCCCAATTGTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTGTGCTAGCATGTGCAGATTTGATGGGGAAAACCCACAGGCAAGCCCAGAGGCTGAGCAAGATATaGAGAGCAAACAGTAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AAVLACADLMGKTHRQAQRLSKI*RANSKQ Trigger: CTGCTTACTGTTTGCTCTTCATATCTTGCTCAGCCT...CTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCACAATTGGGACAGGGGCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTGCTTGAGAGGACAATTATaGAAATGGCCCTACTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: PTIGTGAAAYYWLQGSLCLRGQL*KWPYYS Trigger: AGAGTAGTAGGGCCATTTTCATAATTGTCCTCTCAA...GCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCCTGTCCCAATTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTGTGCTAGCATGTGCAGATTTGATGGGGAAAACCCACAGGCAAGCCCAGGATCAAGATGCCAAATaGAAAACAGCCCTCAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: AAVLACADLMGKTHRQAQDQDAK*KTALRH Trigger: ATGTCTGAGGGCTGTTTTTCATTTGGCATCTTGATC...CTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CAA 90 bp | GAACCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTAGAAGTGCAGTCAGTGCTCATAACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: EPITDGCEPPCGCWE*NSGPLEVQSVLITA Trigger: AGCAGTTATGAGCACTGACTGCACTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCCCTGGAACTGAAGCAGGAATATGGCTATATAGCCTAGCTTGCAGGCCAGTTCGGTCAGTCTCTAGGTaGAATTTTCTGATGCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SPGTEAGIWLYSLACRPVRSVSR*NFLMQS Trigger: GCTCTGCATCAGAAAATTCCACCTAGAGACTGACCG...AACTGGCCTGCAAGCTAGGCTATATAGCCATATTCCTGCTTCAGTTCCAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTCAGACACACACCAGAAGAGTGCATCAGAACCCATTACAGATGGTTGTGACCACAGCTCAGCAGTaGATGAAGCCTCATTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLQTHTRRVHQNPLQMVVTTAQQ*MKPHFG Trigger: GCCAAAATGAGGCTTCATTCACTGCTGAGCTGTGGT...CACAACCATCTGTAATGGGTTCTGATGCACTCTTCTGGTGTGTGTCTGAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTTATTTATGAGTTCACTGTAGCTGTCTTCAGACACACACCAGAAGAGTGCGGCTGCTTGTTGCTGTaGGGTCTTATGGCAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LFIYEFTVAVFRHTPEECGCLLL*GLMAAA Trigger: AGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCC...GCACTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGAACTCATAAATAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTTATTTATGAGTTCACTGTAGCTGTCTTCAGACACACACCAGAAGAGTGCGCTCACTTTGGGCAATaGTACCCCTGGGCTGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFIYEFTVAVFRHTPEECAHFGQ*YPWAGN Trigger: ATTGCCAGCCCAGGGGTAGCATTGCCCAAAGTGAGC...GCACTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGAACTCATAAATAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTTATTTATGAGTTCACTGTAGCTGTCTTCAGACACACACCAGAAGAGTGCTTATGGCAGCTGCTCTaGATCCATTGCTGGCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LFIYEFTVAVFRHTPEECLWQLL*IHCWLL Trigger: AAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAA...GCACTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGAACTCATAAATAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTTATTTATGAGTTCACTGTAGCTGTCTTCAGACACACACCAGAAGAGTGCAGTTCGAGGCTAGCCTaGTTTACATATGAAGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LFIYEFTVAVFRHTPEECSSRLA*FTYEVP Trigger: TGGAACTTCATATGTAAACCAGGCTAGCCTCGAACT...GCACTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGAACTCATAAATAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | TGGAGGGGCACTGTCCCCACAGGCTGCTTGTTGCTGTaGGGTCTTATGGCAGCTGCTCTGGATCCATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WRGTVPTGCLLL*GLMAAALDPLL Trigger: CAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAGTGCCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAGGCATGTCAGGAGGCAGAGGCAGGTGGATCTGTGAGTTCGAGGCTAGCCCATTGCTGGCTTCTTaGGCACCTCCAGGTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: EPGMSGGRGRWICEFEASPLLAS*APPGST Trigger: AGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGG...GCTAGCCTCGAACTCACAGATCCACCTGCCTCTGCCTCCTGACATGCCTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR GCA 72 bp | CACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTaGTCTGGATCCATTGCTGGCTTCTTTGGCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HRLLVAVRSYGS*SGSIAGFFGTS Trigger: GGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR GCA 72 bp | CCCATCTCACTGCACAGCAGCAGCTGTGCTAGCATGTaGAGATTTGATGGGGAAAACCCACAGGCAAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PISLHSSSCASM*RFDGENPQASP Trigger: TGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGCTGCTGTGCAGTGAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | CTGTCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATaGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSPQAACCCEVL*QLLWIHCWLLW Trigger: CCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 72 bp | CAACCCACAATTGGGACAGGGGCAGCAGCTTACTACTaGCTCCAAGGGTCTCTGTGCTTGAACGTGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QPTIGTGAAAYY*LQGSLCLNVCL Trigger: CAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCCTGTCCCAATTGTGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | TCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTaGCAGTCTGTCTTCCGCTGTGCTCATGAGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SIAGFFGTSRFN*QSVFRCAHEEL Trigger: CAGCTCCTCATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR TCA 72 bp | CCATCCCTGTGCGGTCAGTCTCTAGGTGGAATTTTCTaGTGCAGAGCTGGCAGTAAAGCACCCTCTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSLCGQSLGGIF*CRAGSKAPSAG Trigger: ACCAGCAGAGGGTGCTTTACTGCCAGCTCTGCATCAGAAAATTCCACCTAGAGACTGACCGCACAGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | CAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATaGGGAGCTGGAAACTTTGAACCTGCAGCAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QVQLTVCLPLCS*GAGNFEPAAVA Trigger: TGCCACTGCTGCAGGTTCAAAGTTTCCAGCTCCTCATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR GCA 72 bp | TGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTaGTGGCTTCTTTGGCACCTCCAGGTTCAACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: CCEVLWQLLWIH*WLLWHLQVQLT Trigger: TGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 72 bp | TTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTaGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LWQLLWIHCWLL*HLQVQLTVCLP Trigger: CGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CCA 72 bp | TGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTaGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CEVLWQLLWIHC*LLWHLQVQLTV Trigger: GACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR TCA 72 bp | TTGGCAGCTGAAGCAGCGGTGGCACCTAAGGAATTCTaGAAAAACCCCAATCCCTCCAGCAGTAGCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LAAEAAVAPKEF*KNPNPSSSSLF Trigger: GAACAAGCTACTGCTGGAGGGATTGGGGTTTTTTCAGAATTCCTTAGGTGCCACCGCTGCTTCAGCTGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR GCA 72 bp | GAGACTGGCCACGAGGATGATTCTACCCCTTTACTCTaGCTGTTTAGACATGACTCTGTGCAAGCCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ETGHEDDSTPLL*LFRHDSVQASQ Trigger: CTGAGAGGCTTGCACAGAGTCATGTCTAAACAGGCAGAGTAAAGGGGTAGAATCATCCTCGTGGCCAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR GCA 72 bp | GGGGCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTaGTTGAACGTGTGCTTGAAATTTACCAACATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GAAAYYWLQGSL*LNVCLKFTNIG Trigger: CCCTATGTTGGTAAATTTCAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | GCAGAGGCAGGTGGATCTGTGAGTTCGAGGCTAGCCTaGTTTACATATGAAGTTCCAGGAGAGACCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: AEAGGSVSSRLA*FTYEVPGETLS Trigger: AGATAGGGTCTCTCCTGGAACTTCATATGTAAACCAGGCTAGCCTCGAACTCACAGATCCACCTGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | ATTGTTGAACCAGGCATGTCAGGAGGCAGAGGCAGGTaGATCTGTGAGTTCGAGGCTAGCCTGGTTTACATA | + |
|
Preference number: 3 (lower is better) Translates to: IVEPGMSGGRGR*ICEFEASLVYI Trigger: TATGTAAACCAGGCTAGCCTCGAACTCACAGATCCACCTGCCTCTGCCTCCTGACATGCCTGGTTCAACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTCAGACACACACCAGAAGAGTGCATCAGAACCCATTACAGATGGTTGTGCTGAACAACAGGGGTTaGAGGAGCAGAGACTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLQTHTRRVHQNPLQMVVLNNRG*RSRDWP Trigger: TGGCCAGTCTCTGCTCCTCAAACCCCTGTTGTTCAG...CACAACCATCTGTAATGGGTTCTGATGCACTCTTCTGGTGTGTGTCTGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTAGAAGTGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELNSGPLEVQS Trigger: TGACTGCACTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | TGGGCTGGCAATCCTGGGCACTACAAGAAGTTAGGCTaGGCAAGATATGAAGAGCAAACAGTAAGCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WAGNPGHYKKLG*ARYEEQTVSSP Trigger: AGGACTGCTTACTGTTTGCTCTTCATATCTTGCTCAGCCTAACTTCTTGTAGTGCCCAGGATTGCCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | ACTCCAAGCTTAAACACTCAAGGAATGGTGCCATCTTaGGTTTCAGCTGTCTTCCCTTCTAAGCCACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPSLNTQGMVPS*VSAVFPSKPLC Trigger: ACACAGTGGCTTAGAAGGGAAGACAGCTGAAACTCAAGATGGCACCATTCCTTGAGTGTTTAAGCTTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | CCAAGAGAGAAGCTTGACTACACGACAGTCTCTAGCTaGGTGGTGACTGTTTACCATTTGAGGAATACAACA | + |
|
Preference number: 3 (lower is better) Translates to: PREKLDYTTVSS*VVTVYHLRNTT Trigger: TGTTGTATTCCTCAAATGGTAAACAGTCACCACTCAGCTAGAGACTGTCGTGTAGTCAAGCTTCTCTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | GGTAAGATTCCAGCCATGGTGAATTCACTTCTGCAGTaGTCAAGATGCCAAATGAAAAACAGCCCTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GKIPAMVNSLLQ*SRCQMKNSPQT Trigger: TGTCTGAGGGCTGTTTTTCATTTGGCATCTTGATCACTGCAGAAGTGAATTCACCATGGCTGGAATCTTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | TGGCCTCTTAAAAGTAGTTTATCCAAGTGGAGACATTaGAGGCATGAGTCAGCTGCTGCCTGTAGCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: WPLKSSLSKWRH*RHESAAACSNT Trigger: AGTATTGCTACAGGCAGCAGCTGACTCATGCCTTCAATGTCTCCACTTGGATAAACTACTTTTAAGAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | GAGAACCACAGCTCAGCAGTGAATGAAGCCTCATTTTaGCTGTCTATCACACTATCTATTCCAACCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: ENHSSAVNEASF*LSITLSIPTHN Trigger: ATTGTGGGTTGGAATAGATAGTGTGATAGACAGCCAAAATGAGGCTTCATTCACTGCTGAGCTGTGGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | CAAAGAACAGTTATCCTGAGAACCACAGCTCAGCAGTaGATGAAGCCTCATTTTGGCTGTCTATCACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: QRTVILRTTAQQ*MKPHFGCLSHY Trigger: ATAGTGTGATAGACAGCCAAAATGAGGCTTCATTCACTGCTGAGCTGTGGTTCTCAGGATAACTGTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | ATCAAGATGCCAAATGAAAAACAGCCCTCAGACATGTaGATCCCCCAAAGAACAGTTATCCTGAGAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: IKMPNEKQPSDM*IPQRTVILRTT Trigger: TGTGGTTCTCAGGATAACTGTTCTTTGGGGGATTCACATGTCTGAGGGCTGTTTTTCATTTGGCATCTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR GCA 72 bp | TACTACTGGCTCCAAGGGTCTCTGTGCTTGAACGTGTaGTTGAAATTTACCAACATAGGGATATATAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: YYWLQGSLCLNV*LKFTNIGIYST Trigger: AGTACTATATATCCCTATGTTGGTAAATTTCAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | CATCCCAAGAAACTTGACCCTTTACAACAACCGTTCTaGCCTCTTAAAAGTAGTTTATCCAAGTGGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: HPKKLDPLQQPF*PLKSSLSKWRH Trigger: ATGTCTCCACTTGGATAAACTACTTTTAAGAGGCCAGAACGGTTGTTGTAAAGGGTCAAGTTTCTTGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CCA 72 bp | AACAGACAACAATTTCGTTTTAGTCCATCCAGTTTTTaGCACTTCGTTACAGCAGCTCCAGGAAGCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: NRQQFRFSPSSF*HFVTAAPGSKF Trigger: GAATTTGCTTCCTGGAGCTGCTGTAACGAAGTGCCAAAAACTGGATGGACTAAAACGAAATTGTTGTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR TCA 72 bp | GAGGACAATTATGAAAATGGCCCTACTACTCTGTCCTaGTTTTTCATAAGTATTGATTTGGGAGAGCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: EDNYENGPTTLS*FFISIDLGEPS Trigger: GCTAGGCTCTCCCAAATCAATACTTATGAAAAATCAGGACAGAGTAGTAGGGCCATTTTCATAATTGTCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCGGGTCGCCAGCCCCATaGTACCAGCTGCAGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVRSYGSCSGSIAGFFGTGSPAP*YQLQVV Trigger: GACAACCTGCAGCTGGTACCATGGGGCTGGCGACCC...GGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCAGGGTCGCCAGCCCCATaGTACCAGCTGCAGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLLWHLQVQLTVCLPLCSGSPAP*YQLQVV Trigger: GACAACCTGCAGCTGGTACCATGGGGCTGGCGACCC...TGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTTCTGGCTCAAGCTCATaGTGGAAGGGACGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHRLLVAVRSYGSCSGSISGSSS*WKGRFL Trigger: GAGGAAGCGTCCCTTCCAGCATGAGCTTGAGCCAGA...AATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATGCGATCAGTGTGTATTTaGTCTTCCCGGCCACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLAPPGSTDSLSSAVLMRSVCI*SSRPPG Trigger: GCCGGGTGGCCGGGAAGACCAAATACACACTGATCG...CATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCCAGTATCGAGCCACCTaGCAACGCCCACAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASLAPPGSTDSLSSAVLQYRAT*QRPQML Trigger: CAACATCTGTGGGCGTTGCCAGGTGGCTCGATACTG...GAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCCAGTATCGAGCCACCTaGCAACGCCCACAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVRSYGSCSGSIAGFFGTQYRAT*QRPQML Trigger: CAACATCTGTGGGCGTTGCCAGGTGGCTCGATACTG...GGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCACGACAGTGCTTCTTGTaGGCAGGCCAGTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLWHLQVQLTVCLPLCSRQCFL*AGQSFC Trigger: GCAGAAGGACTGGCCTGCCCACAAGAAGCACTGTCG...TGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CAA 72 bp | GTCCAGAATGCTACAAGACAGACCTGCAGCACCCTTTaGCCCAGCACTTGCAGTGGCCGCGGTAGCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VQNATRQTCSTL*PSTCSGRGSKC Trigger: ACATTTGCTACCGCGGCCACTGCAAGTGCTGGGCAAAAGGGTGCTGCAGGTCTGTCTTGTAGCATTCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR GCA 90 bp | ATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGGCTCATGTAGAAGCCTaGCAGAGCCCCTTCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHCWLLWHLQVQLTVCLPAHVEA*QSPFLG Trigger: ACCGAGGAAGGGGCTCTGGCAGGCTTCTACATGAGC...CGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCGGGTCTGTGGGAAGCTaGTGGATTGCAAGCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CWLLWHLQVQLTVCLPLCGSVGS*WIASQY Trigger: ATACTGGCTTGCAATCCAGCAGCTTCCCACAGACCC...GCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGTTCCTCTCCCGACAGTaGTTCTTGTGGGCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCCEVLWQLLWIHCWLLWFLSRQ*FLWAGQ Trigger: CTGGCCTGCCCACAAGAAGCACTGTCGGGAGAGGAA...CCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGGATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTTTCCTCTCCCGACAGTaGTTCTTGTGGGCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWIHCWLLWHLQVQLTVCFLSRQ*FLWAGQ Trigger: CTGGCCTGCCCACAAGAAGCACTGTCGGGAGAGGAA...ACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACTCTGGCTCAAGCTCATaGTGGAAGGGACGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCEVLWQLLWIHCWLLWHSGSSS*WKGRFL Trigger: GAGGAAGCGTCCCTTCCAGCATGAGCTTGAGCCAGA...GTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | CCCACAATTGGGACAGGGGCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTGCGTAGCTCTCCACCAGTaGTATGTCTTGCTCATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTIGTGAAAYYWLQGSLCVALHQ*YVLLID Trigger: ATCGATGAGCAAGACATACCACTGGTGGAGAGCTAC...GCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGCCCCTGTCCCAATTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGAGGTCTCTTCAGCTTTaGGTCGCCAGCCCCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLASLAPPGSTDSLSSAVRSLQL*VASPMV Trigger: TACCATGGGGCTGGCGACCCAAAGCTGAAGAGACCT...CACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CAA 72 bp | CACTGCACAGCAGCAGCTGTGCTAGCATGTGCAGATTaGATGGGGAAAACCCACAGGCAAGCCCAGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HCTAAAVLACAD*MGKTHRQAQGI Trigger: TATACCCTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGCTGCTGTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGTGCTAGCATGTGCAGATTTGATGGGGAAAACCCACAGGCAAGCCCAGCCACAGTCACAGCATTaGGATGTACCACCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AAVLACADLMGKTHRQAQPQSQH*DVPPET Trigger: GGTTTCAGGTGGTACATCTCAATGCTGTGACTGTGG...CTGGGCTTGCCTGTGGGTTTTCCCCATCAAATCTGCACATGCTAGCACAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCTCCAGGTCCACAGTCACAGCATTaGGATGTACCACCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLMAAALDPLLASLAPPGPQSQH*DVPPET Trigger: GGTTTCAGGTGGTACATCTCAATGCTGTGACTGTGG...ACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGGGGCACTGTCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGTTTGCTCCCTTTGTTTaGTGGAGGTCTCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGGALSPQAACCCEVLWQFAPFV*WRSLQL Trigger: AAGCTGAAGAGACCTCCAGCAAACAAAGGGAGCAAA...CTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAGTGCCCCTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACCGCTCCCTTTGTTTGCTaGAGGTCTCTTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVRSYGSCSGSIAGFFGTAPFVC*RSLQLW Trigger: CCAAAGCTGAAGAGACCTCCAGCAAACAAAGGGAGC...GGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CAA 72 bp | CTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTaGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMAAALDPLLAS*APPGSTDSLSS Trigger: GGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CAA 72 bp | CTATTACCAGAGAGAACAGAGCCTCCTTTGCACACCTaGCTAACACTCTCTGCTCCTCACAGGCCAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPERTEPPLHT*LTLSAPHRPTW Trigger: CCAGGTTGGCCTGTGAGGAGCAGAGAGTGTTAGCAAGGTGTGCAAAGGAGGCTCTGTTCTCTCTGGTAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCAACGCCCACAGATGTTaGACTCTCGAAGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLVAVRSYGSCSGSIAGNAHRC*TLEAAF Trigger: AAAAGCAGCTTCGAGAGTTCAACATCTGTGGGCGTT...GCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATGCCACCACATCCCCATTaGCATTATAGTACCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLAPPGSTDSLSSAVLMPPHPH*HYSTGS Trigger: TGACCCGGTACTATAATGCCAATGGGGATGTGGTGG...CATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCCACCACATCCCCATTaGCATTATAGTACCGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLASLAPPGSTDSLSSAVPPHPH*HYSTGS Trigger: TGACCCGGTACTATAATGCCAATGGGGATGTGGTGG...CACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTAGAAGTGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLEVQSVL Trigger: GAGCACTGACTGCACTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR GCA 90 bp | GATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCTTTGCTCCCTTTGTTTaGTGGAGGTCTCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPLLASLAPPGSTDSLSSFAPFV*WRSLQL Trigger: AAGCTGAAGAGACCTCCAGCAAACAAAGGGAGCAAA...GGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCTTGAACTCTCGAAGCTaGTTTTCAATCACCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LASLAPPGSTDSLSSAVLLNSRS*FSITVQ Trigger: TTGTACGGTGATTGAAAAGCAGCTTCGAGAGTTCAA...GAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGCACTTGAACTCTCGAAGCTaGTTTTCAATCACCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CCEVLWQLLWIHCWLLWHLNSRS*FSITVQ Trigger: TTGTACGGTGATTGAAAAGCAGCTTCGAGAGTTCAA...GTGCCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCAGACACACACCAGAAGAGTGCATCAGAACCCATTACAGATGGTTGTGGCTCCCTTTGTTTGCTaGAGGTCTCTTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLQTHTRRVHQNPLQMVVAPFVC*RSLQLW Trigger: CCAAAGCTGAAGAGACCTCCAGCAAACAAAGGGAGC...CACAACCATCTGTAATGGGTTCTGATGCACTCTTCTGGTGTGTGTCTGAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CAA 72 bp | GCAGCAGCTTACTACTGGCTCCAAGGGTCTCTGTGCTaGAACGTGTGCTTGAAATTTACCAACATAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AAAYYWLQGSLC*NVCLKFTNIGI Trigger: TATCCCTATGTTGGTAAATTTCAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTAGTAAGCTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAGTAGCTTGTTCCAAGGCCAAGTAGCCCAACATACTATTTTAAGACTAACCAGTGGTATGTCTTaGTCATCGATCAGTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFQGQVAQHTILRLTSGMS*SSISVY Trigger: ATACACACTGATCGATGAGCAAGACATACCACTGGT...TAGTCTTAAAATAGTATGTTGGGCTACTTGGCCTTGGAACAAGCTACTGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CAA 72 bp | TACTGGCTCCAAGGGTCTCTGTGCTTGAACGTGTGCTaGAAATTTACCAACATAGGGATATATAGTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YWLQGSLCLNVC*KFTNIGIYSTL Trigger: CAAAGTACTATATATCCCTATGTTGGTAAATTTCAAGCACACGTTCAAGCACAGAGACCCTTGGAGCCAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| 3UTR CAA 72 bp | GCCCAACATACTATTTTAAGACTAAGGGTCCCATCGTaGAACCACCAGAACATTCATAGAACAGCTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQHTILRLRVPS*NHQNIHRTATK Trigger: CTTTGTAGCTGTTCTATGAATGTTCTGGTGGTTCAACGATGGGACCCTTAGTCTTAAAATAGTATGTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGGAGCCTCCCTGTTGTCTCTGCTGGAGGTGAAAACTGGAGGGGCACTGAGGTCTCTTCAGCTTaGGGTCGCCAGCCCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGSLPVVSAGGENWRGTEVSSA*GRQPHG Trigger: ACCATGGGGCTGGCGACCCAAAGCTGAAGAGACCTC...AGTGCCCCTCCAGTTTTCACCTCCAGCAGAGACAACAGGGAGGCTCCCTAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGGGGCACTGTCCCCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGGGTACCAGCTGCAGGTaGTCCAGGCGATTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TGGALSPQAACCCEVLWQGTSCR*SRRLST Trigger: TGTGGACAATCGCCTGGACAACCTGCAGCTGGTACC...CTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGGGGACAGTGCCCCTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS TCA 90 bp | TTGTCCAGGCGATTGTCCACAGTCACAGCATTGAGATGTACCACCTaGAACCCGGGAGCCACACCTCCCCTGTGTCGTTCCCACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRRLSTVTALRCTT*NPGATPPLCRSHSS Trigger: GCTGCTGTGGGAACGACACAGGGGAGGTGTGGCTCCCGGGTTTCAGGTGGTACATCTCAATGCTGTGACTGTGGACAATCGCCTGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCTCCCGACAGTGCTTCTaGTGGGCAGGCCAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASLAPPGSTDSLSSAVLSRQCF*WAGQSF Trigger: GAAGGACTGGCCTGCCCACAAGAAGCACTGTCGGGA...GAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGGAGGTCTCTTCAGCTTaGGGTCGCCAGCCCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCEVLWQLLWIHCWLLWEVSSA*GRQPHG Trigger: ACCATGGGGCTGGCGACCCAAAGCTGAAGAGACCTC...CCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | GAACCAGGCATGTCAGGAGGCAGAGGCAGGTGGATCTGTGAGTTCGAGGCTAGCCTTTGCTCCCTTTGTTaGCTGGAGGTCTCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EPGMSGGRGRWICEFEASLCSLC*LEVSSA Trigger: AGCTGAAGAGACCTCCAGCAAACAAAGGGAGCAAAG...GCTAGCCTCGAACTCACAGATCCACCTGCCTCTGCCTCCTGACATGCCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTCCCGACAGTGCTTCTaGTGGGCAGGCCAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ACCCEVLWQLLWIHCWLLSRQCF*WAGQSF Trigger: GAAGGACTGGCCTGCCCACAAGAAGCACTGTCGGGA...AAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | ATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGGGTACCAGCTGCAGGTaGTCCAGGCGATTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IHCWLLWHLQVQLTVCLPGTSCR*SRRLST Trigger: TGTGGACAATCGCCTGGACAACCTGCAGCTGGTACC...CGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCTGCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCCAACGCCCACAGATGTaGAACTCTCGAAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQAACCCEVLWQLLWIHCQRPQM*NSRSCF Trigger: AAAGCAGCTTCGAGAGTTCAACATCTGTGGGCGTTG...GCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGCAGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | GATCCATTGCTGGCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCCTTTGCTCCCTTTGTTaGCTGGAGGTCTCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DPLLASLAPPGSTDSLSSLCSLC*LEVSSA Trigger: AGCTGAAGAGACCTCCAGCAAACAAAGGGAGCAAAG...GGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGCCAGCAATGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTTGGTGGGAAGCTGCTGGATaGCAAGCCAGTATAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCCEVLWQLLWIHCWLLWWEAAG*QASISF Trigger: AAAGCTTATACTGGCTTGCAATCCAGCAGCTTCCCA...CCAAAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTTGGCACCTCCAGGTTCAACTGACAGTCTGTCTTCCGCTGTGCTCATGATTCAAGACAGGGAATaGTTCTTCTATAGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLAPPGSTDSLSSAVLMIQDRE*FFYRVC Trigger: ACAGACCCTATAGAAGAACAATTCCCTGTCTTGAAT...CATGAGCACAGCGGAAGACAGACTGTCAGTTGAACCTGGAGGTGCCAAAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTGCTGTGAGGTCTTATGGCAGCTGCTCTGGATCCATTGCTGGCTTCTTATTCAAGACAGGGAATaGTTCTTCTATAGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ACCCEVLWQLLWIHCWLLIQDRE*FFYRVC Trigger: ACAGACCCTATAGAAGAACAATTCCCTGTCTTGAAT...AAGAAGCCAGCAATGGATCCAGAGCAGCTGCCATAAGACCTCACAGCAACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS GCA 90 bp | ACATTCAAGACAGGGAATTGTTCTTCTATAGGGTCTGTGGGAAGCTaGTGGATTGCAAGCCAGTATAAGCTTTGCTCCCTTTGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFKTGNCSSIGSVGS*WIASQYKLCSLCLL Trigger: CAGCAAACAAAGGGAGCAAAGCTTATACTGGCTTGCAATCCAGCAGCTTCCCACAGACCCTATAGAAGAACAATTCCCTGTCTTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAGTAGCTTGTTCCAAGGCCAAGTAGCCCAACATACTATTTTAAGACTACACCAGTGGTATGTCTaGCTCATCGATCAGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLFQGQVAQHTILRLHQWYV*LIDQCV Trigger: TACACACTGATCGATGAGCAAGACATACCACTGGTG...TAGTCTTAAAATAGTATGTTGGGCTACTTGGCCTTGGAACAAGCTACTGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTTATTTATGAGTTCACTGTAGCTGTCTTCAGACACACACCAGAAGAGTGCCAACGCCCACAGATGTaGAACTCTCGAAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFIYEFTVAVFRHTPEECQRPQM*NSRSCF Trigger: AAAGCAGCTTCGAGAGTTCAACATCTGTGGGCGTTG...GCACTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGAACTCATAAATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAATCAAGACTGTGATAGATATGCTGCAATAGGGAAAGGTTTAACAGGCTGGGAAGCTGCTGGATaGCAAGCCAGTATAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TENQDCDRYAAIGKGLTGWEAAG*QASISF Trigger: AAAGCTTATACTGGCTTGCAATCCAGCAGCTTCCCA...GCCTGTTAAACCTTTCCCTATTGCAGCATATCTATCACAGTCTTGATTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS TCA 72 bp | CGATTGTCCACAGTCACAGCATTGAGATGTACCACCTaGAACCCGGGAGCCACACCTCCCCTGTGTCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSTVTALRCTT*NPGATPPLCRS Trigger: GGAACGACACAGGGGAGGTGTGGCTCCCGGGTTTCAGGTGGTACATCTCAATGCTGTGACTGTGGACAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS GCA 72 bp | CCCTGTGTCGTTCCCACAGCAGCTCATGTAGAAGCCTaGCAGAGCCCCTTCCTCGGTTTTTGTCAAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PCVVPTAAHVEA*QSPFLGFCQRH Trigger: ATGCCTTTGACAAAAACCGAGGAAGGGGCTCTGGCAGGCTTCTACATGAGCTGCTGTGGGAACGACACAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS CAA 90 bp | TTCCATTCGAGCCTCAAAGGAGTAGCTCTCCACCAGTGGTATGTCTaGCTCATCGATCAGTGTGTATTTGGTCTTCCCGGCCACCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FHSSLKGVALHQWYV*LIDQCVFGLPGHPA Trigger: GGCCGGGTGGCCGGGAAGACCAAATACACACTGATCGATGAGCAAGACATACCACTGGTGGAGAGCTACTCCTTTGAGGCTCGAATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS CAA 72 bp | AGCCTCAAAGGAGTAGCTCTCCACCAGTGGTATGTCTaGCTCATCGATCAGTGTGTATTTGGTCTTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLKGVALHQWYV*LIDQCVFGLPG Trigger: GCCGGGAAGACCAAATACACACTGATCGATGAGCAAGACATACCACTGGTGGAGAGCTACTCCTTTGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||
| CDS GCA 72 bp | ACAGGGAATTGTTCTTCTATAGGGTCTGTGGGAAGCTaGTGGATTGCAAGCCAGTATAAGCTTTGCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGNCSSIGSVGS*WIASQYKLCSL Trigger: AAGGGAGCAAAGCTTATACTGGCTTGCAATCCAGCAGCTTCCCACAGACCCTATAGAAGAACAATTCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028350.9 ENSMUST00000148042.3 |
||
| CDS CCA 72 bp | TTCCATTCGAGCCTCAAAGGAGTAGCTCTCCACCAGTaGTATGTCTTGCTCATCGATCAGTGTGTATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FHSSLKGVALHQ*YVLLIDQCVFG Trigger: ACCAAATACACACTGATCGATGAGCAAGACATACCACTGGTGGAGAGCTACTCCTTTGAGGCTCGAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028350.9 |
||