Pregenerated sensors for ZMYND11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021156Ensembl transcript IDs: ENSMUST00000062658.15, ENSMUST00000110633.8, ENSMUST00000110634.8, ENSMUST00000110635.8, ENSMUST00000110636.9, ENSMUST00000110637.8, ENSMUST00000110638.8, ENSMUST00000128658.8, ENSMUST00000130151.8, ENSMUST00000140180.2, ENSMUST00000144642.2, ENSMUST00000152725.8, ENSMUST00000154994.8, ENSMUST00000157035.9, ENSMUST00000220996.2, ENSMUST00000222358.2, ENSMUST00000222475.2, ENSMUST00000223421.2
Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAGAGCTCGCCCCGTGCGCGTGTGTGGCAGTAGTTACGCCGTCTaGAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACAGACGGCTC | + |
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Preference number: 1 (lower is better) Translates to: KRARPVRVCGSSYAV*SSTGTAWRRPHRRL Trigger: GAGCCGTCTGTGAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCACACACGCGCACGGGGCGAGCTCTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR TCA 90 bp | TCCTCATTCTTAGACTTCCAGAACCTTCCTTCACGGAGGAAGCGCTaGTGCAGTTCCAGCTCGTCACAGGCCTTCTTCCAGCCCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSFLDFQNLPSRRKR*CSSSSSQAFFQPML Trigger: CAGCATGGGCTGGAAGAAGGCCTGTGACGAGCTGGAACTGCATCAGCGCTTCCTCCGTGAAGGAAGGTTCTGGAAGTCTAAGAATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
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| 3UTR GCA 90 bp | CCATCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGACATATACCTTTCTTCACCTCCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PSFTAKLSWRVVSLG*IPWTRDIYLSSPPP Trigger: TGGGGGAGGTGAAGAAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR CCA 90 bp | ACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTGGGATGCATACCGTaGACTCGGGACATATACCTTTCTTCACCTCCCCCATTCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: TAKLSWRVVSLGCIP*TRDIYLSSPPPFTS Trigger: GGAAGTGAATGGGGGAGGTGAAGAAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR TCA 90 bp | AAGGCCTCTCTTAGTTTCTTTTGCTTGCTGGCCTGCTTCTTTTGCTaGCAGGGCCTCACTGGTTTCCCTAGGATGGCCCTGGACTTACTC | + |
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Preference number: 1 (lower is better) Translates to: KASLSFFCLLACFFC*QGLTGFPRMALDLL Trigger: GAGTAAGTCCAGGGCCATCCTAGGGAAACCAGTGAGGCCCTGTCAGCAAAAGAAGCAGGCCAGCAAGCAAAAGAAACTAAGAGAGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
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| 3UTR TCA 90 bp | ATTAGGTATGCAAGGGTAGCAGAACCAGTTGTCGGGCCGTGCGTTTaGCAGATAGAAGCAGTTCTTGCAAAGCTGCAGCTCGTCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: IRYARVAEPVVGPCV*QIEAVLAKLQLVQL Trigger: GAGCTGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATCTGTCAAACGCACGGCCCGACAACTGGTTCTGCTACCCTTGCATACCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR GCA 90 bp | TCGGGACATATACCTTTCTTCACCTCCCCCATTCACTTCCATTCCTaGAGTGTTTCTCCCACTGTCTGCAGCCCTGGGACACTGCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: SGHIPFFTSPIHFHS*SVSPTVCSPGTLLY Trigger: GTAAAGCAGTGTCCCAGGGCTGCAGACAGTGGGAGAAACACTGCAGGAATGGAAGTGAATGGGGGAGGTGAAGAAAGGTATATGTCCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR CCA 90 bp | CGATTGCCACCTGGACACTGTGAGGCGGGCAACTTACTTCCTTTTTaGGCTCCACACTCTGATTACGTCGTCCTTTCTTTGCTCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RLPPGHCEAGNLLPF*APHSDYVVLSLLLA Trigger: AGCCAAGAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGGCAATCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
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| 3UTR GCA 90 bp | ACTGTCTGCTCCATAGAAGATCACTGTGTTGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTCGTAACTCCGGTACTTCCCCTCATT | + |
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Preference number: 1 (lower is better) Translates to: TVCSIEDHCVVEKQL*VSLELLVTPVLPLI Trigger: AATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGATCTTCTATGGAGCAGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR GCA 90 bp | AGTGACCTTCAGCTGCTCGTTACTGGTGGAGGAGATACTGGATTCTaGCTCTTCCTCACCTCGGTCCTCATTCTTAGACTTCCAGAACCT | + |
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Preference number: 1 (lower is better) Translates to: SDLQLLVTGGGDTGF*LFLTSVLILRLPEP Trigger: AGGTTCTGGAAGTCTAAGAATGAGGACCGAGGTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGAAGGTCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
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| 3UTR TCA 90 bp | CATAGAAGATCACTGTGTTGTGGAGAAGCAGCTGTGCGTCAGCCTTaGACTCCTCGTAACTCCGGTACTTCCCCTCATTCACCTTCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: HRRSLCCGEAAVRQP*TPRNSGTSPHSPSL Trigger: AAGAGAAGGTGAATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGATCTTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR CCA 90 bp | CTTGTTAGAGTGCTTCTTCTTAATGCTCTGCAGTGTGGGCAGGTGTaGCTCTCTGCTGCTCTTACTACGTCAGCACGTTCAGTCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LVRVLLLNALQCGQV*LSAALTTSARSVCS Trigger: AGAACAGACTGAACGTGCTGACGTAGTAAGAGCAGCAGAGAGCCACACCTGCCCACACTGCAGAGCATTAAGAAGAAGCACTCTAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
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| 3UTR CCA 90 bp | GTTAGAGTTTCGACAATAAGACCATCTTTCACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGATGCATACCGTGGACTCGGGACATA | + |
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Preference number: 1 (lower is better) Translates to: VRVSTIRPSFTAKLS*RVVSLGCIPWTRDI Trigger: TATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGAAACTCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR GCA 90 bp | TACTTCCTTTTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGACCTTCAGCTGCTCGTTACTGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: YFLFGLHTLITSSFL*SWLLSDLQLLVTGG Trigger: TCCACCAGTAACGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
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| 3UTR TCA 90 bp | AAATATTCCCACAATAACTTGCTCTCACAGGGGTGGATCAACGTCTaGAAACAATCAAAGACCGTCAAGTGTCCTTGTTCGGGCAGCGCA | + |
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Preference number: 1 (lower is better) Translates to: KYSHNNLLSQGWINV*KQSKTVKCPCSGSA Trigger: TGCGCTGCCCGAACAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAGAGCAAGTTATTGTGGGAATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR GCA 90 bp | GGACTTTGTACAAATCACGGCATCTTTAATACAAGGAACGGAGCATaGATTCTCACTGTGTACAGTCAGGGATTTGTTAGTAGCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GLCTNHGIFNTRNGA*ILTVYSQGFVSSSV Trigger: CACACTGCTACTAACAAATCCCTGACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGTATTAAAGATGCCGTGATTTGTACAAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR GCA 90 bp | TGTCGACAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATaGAGCTATCAGGTAAATAGTACATACTCTGGAATGATTTTACAC | + |
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Preference number: 1 (lower is better) Translates to: CRQRQEAKVTGTSRS*SYQVNSTYSGMILH Trigger: GTGTAAAATCATTCCAGAGTATGTACTATTTACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTGTCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGGGTTAGGGTGGCACTaGGGAGGGAAGGTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VAVVTPSAVAPALRGGGLGLGWH*GGKVGG Trigger: CCCTCCCACCTTCCCTCCCCAGTGCCACCCTAACCC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGGGTTAGGGTGGCACTaGGGAGGGAAGGTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLGLGWH*GGKVGG Trigger: CCCTCCCACCTTCCCTCCCCAGTGCCACCCTAACCC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGGGTTAGGGTGGCACTaGGGAGGGAAGGTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTGLGWH*GGKVGG Trigger: CCCTCCCACCTTCCCTCCCCAGTGCCACCCTAACCC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGTAGGAGACACAGGGTaGGTTAGGGTGGCACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLVGDTG*VRVALG Trigger: CCCCAGTGCCACCCTAACCCACCCTGTGTCTCCTAC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCAGCCCCCGAAAAATaGCGGAGGAGCATTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSAPEK*RRSINK Trigger: TTTGTTAATGCTCCTCCGGCATTTTTCGGGGGCTGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGTAGGAGACACAGGGTaGGTTAGGGTGGCACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTVGDTG*VRVALG Trigger: CCCCAGTGCCACCCTAACCCACCCTGTGTCTCCTAC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGCTAGCCCTGCTGTGTaGACCCTGTTCCCTATATTC | + |
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Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLASPAV*TLFPIF Trigger: GAATATAGGGAACAGGGTTCACACAGCAGGGCTAGC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGCAGCGCAGCAGCAGTaGTGGTACACGGCAGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLAAQQQ*WYTAAR Trigger: CCTCGCTGCCGTGTACCATCACTGCTGCTGCGCTGC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGCGGGTGGTCTCTTTGGGATGCATACCGTGGACTCGGGACATATACCTTGTTTCTCCCACTGTCTaGAGCCCTGGGACACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SWRVVSLGCIPWTRDIYLVSPTV*SPGTLL Trigger: AAGCAGTGTCCCAGGGCTGCAGACAGTGGGAGAAAC...AAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACAATTTTGGCTTCTTaGGAACAAAAACCGCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTILAS*EQKPLR Trigger: ACGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGGGTTAGGGTGGCACTaGGGAGGGAAGGTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVGLGWH*GGKVGG Trigger: CCCTCCCACCTTCCCTCCCCAGTGCCACCCTAACCC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCTGGACACTGTGAGGCGGGCAACTTACTTCCTTTTTGGGCTCCACACTCTTTTGCTCTTGGCTCTTaGGTGACCTTCAGCTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: PPGHCEAGNLLPFWAPHSFALGS*VTFSCS Trigger: CGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAA...AGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGTAGGAGACACAGGGTaGGTTAGGGTGGCACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: STIDPFLPVTLLKQTPRRVGDTG*VRVALG Trigger: CCCCAGTGCCACCCTAACCCACCCTGTGTCTCCTAC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCAGCCCCCGAAAAATaGCGGAGGAGCATTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSAPEK*RRSINK Trigger: TTTGTTAATGCTCCTCCGGCATTTTTCGGGGGCTGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCGCAGGTGTGGCTCTCTaGTGCTCTTACTACGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFAGVAL*CSYYVS Trigger: GCTGACGTAGTAAGAGCAGCAGAGAGCCACACCTGC...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAAGGCTGGTGCAAAATaGGAAGCAAATTCTAAACAA | + |
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Preference number: 2 (lower is better) Translates to: VAVVTPSAVAPALRGGGLKAGAK*EANSKQ Trigger: TTGTTTAGAATTTGCTTCCCATTTTGCACCAGCCTT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAAAGTGTTTAAAGGCTaGTGCAAAATGGGAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VAVVTPSAVAPALRGGGLKVFKG*CKMGSK Trigger: TTTGCTTCCCATTTTGCACCAGCCTTTAAACACTTT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAATGCTCCTGCAAACTGGGCACTGCCAGTGACTACTGCTGTCTCTAAGCCTACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LNAPANWALPVTTAVSKPTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...AGGCTTAGAGACAGCAGTAGTCACTGGCAGTGCCCAGTTTGCAGGAGCATTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAAGTGCTCTCTCCCTCTaGGTAGGAGACACAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSALSL*VGDTGW Trigger: CCACCCTGTGTCTCCTACTCAGAGGGAGAGAGCACT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCAGCCCCCGAAAAATaGCGGAGGAGCATTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSAPEK*RRSINK Trigger: TTTGTTAATGCTCCTCCGGCATTTTTCGGGGGCTGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACAAGGAACGGAGCATaGATTCTCACTGTGTACAGT | + |
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Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLTRNGA*ILTVYS Trigger: ACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR-3UTR CCA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCTCAGTCTGTTCTCCTTaGGGCTCTGGACAAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFSVCSP*GSGQGV Trigger: AACCCCTTGTCCAGAGCCCCAAGGAGAACAGACTGA...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGCTAGCCCTGCTGTGTaGACCCTGTTCCCTATATTC | + |
|
Preference number: 2 (lower is better) Translates to: STIDPFLPVTLLKQTPRRASPAV*TLFPIF Trigger: GAATATAGGGAACAGGGTTCACACAGCAGGGCTAGC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAACTTACTTCCTTTTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTGCTCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: ATYFLFGLHTLITSSFLCSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...GCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACAATTTTGGCTTCTTaGGAACAAAAACCGCTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLTILAS*EQKPLR Trigger: ACGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR CAA 90 bp | ATAAGACCATCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACTCGGGACATATACCTTTCTTCACCT | + |
|
Preference number: 2 (lower is better) Translates to: IRPSFTAKLSWRVVS*GCIPWTRDIYLSSP Trigger: AGGTGAAGAAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGCTAGCCCTGCTGTGTaGACCCTGTTCCCTATATTC | + |
|
Preference number: 2 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLASPAV*TLFPIF Trigger: GAATATAGGGAACAGGGTTCACACAGCAGGGCTAGC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGCTAGCCCTGCTGTGTaGACCCTGTTCCCTATATTC | + |
|
Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVASPAV*TLFPIF Trigger: GAATATAGGGAACAGGGTTCACACAGCAGGGCTAGC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCACAATTTTGGCTTCTTaGGAACAAAAACCGCTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTTILAS*EQKPLR Trigger: ACGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCAGCCCCCGAAAAATaGCGGAGGAGCATTAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSAPEK*RRSINK Trigger: TTTGTTAATGCTCCTCCGGCATTTTTCGGGGGCTGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR CAA 90 bp | AATCCAGGCTCTCTGGTGGTGATGGCCAAAGAAGCGAACATCCACTaGATTGTCTTCTTTCTGCATGACTTTGGCTGGCCAAAACCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NPGSLVVMAKEANIH*IVFFLHDFGWPKPK Trigger: TTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTTCTTTGGCCATCACCACCAGAGAGCCTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAACAAGGAACGGAGCATaGATTCTCACTGTGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: STIDPFLPVTLLKQTPRRTRNGA*ILTVYS Trigger: ACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAAAGTGTTTAAAGGCTaGTGCAAAATGGGAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTKVFKG*CKMGSK Trigger: TTTGCTTCCCATTTTGCACCAGCCTTTAAACACTTT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAACAAGGAACGGAGCATaGATTCTCACTGTGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVTRNGA*ILTVYS Trigger: ACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGACAAGGAACGGAGCATaGATTCTCACTGTGTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLTRNGA*ILTVYS Trigger: ACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAATTCCCACAATAACTTaGTCTCACAGGGGTGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVIPTIT*SHRGGS Trigger: TGATCCACCCCTGTGAGAGCAAGTTATTGTGGGAAT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCTCTCTTAGTTTCTTTTaGTTGCTGGCCTGCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFSLSFF*LLACFF Trigger: AAAGAAGCAGGCCAGCAAGCAAAAGAAACTAAGAGA...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAACAATTTTGGCTTCTTaGGAACAAAAACCGCTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVTILAS*EQKPLR Trigger: ACGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CCA 90 bp | GACGATGAACCTCAAGTAGGTGCCCATTTCCTGCTTGTTAGAGTGCTTCTTCTTGTTTCTTTTGCTTGCTaGCCTGCTTCTTTTGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: DDEPQVGAHFLLVRVLLLVSFAC*PASFAD Trigger: GTCAGCAAAAGAAGCAGGCCAGCAAGCAAAAGAAAC...AAGAAGAAGCACTCTAACAAGCAGGAAATGGGCACCTACTTGAGGTTCATCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGAACCTCAAGTAGGTGCCCATTTCCTGCTTGTTAGAGTGCTTCTTCTTAATTTGGGATGCATACCGTaGACTCGGGACATATACCTT | + |
|
Preference number: 2 (lower is better) Translates to: DEPQVGAHFLLVRVLLLNLGCIP*TRDIYL Trigger: AAGGTATATGTCCCGAGTCCACGGTATGCATCCCAA...ATTAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCACCTACTTGAGGTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGAAAGTGTTTAAAGGCTaGTGCAAAATGGGAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLKVFKG*CKMGSK Trigger: TTTGCTTCCCATTTTGCACCAGCCTTTAAACACTTT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAAAACACAGGTCACATATCAACACCTCTCCAGGCAAATGGCATTCAAAACAAACTGCTTTACAACTGTaGCAGTGCATCCATACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RKHRSHINTSPGKWHSKQTALQL*QCIHTS Trigger: GCTTGTATGGATGCACTGCCACAGTTGTAAAGCAGT...TTGTTTTGAATGCCATTTGCCTGGAGAGGTGTTGATATGTGACCTGTGTTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATTACCCCAGTTTCCCTaGAATTTTAAACTACAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVLPQFP*NFKLQD Trigger: ATCTTGTAGTTTAAAATTGCAGGGAAACTGGGGTAA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAAACACAGGTCACATATCAACACCTCTCCAGGCAAATGGCATTCAAAACAACAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RKHRSHINTSPGKWHSKQQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...TTGTTTTGAATGCCATTTGCCTGGAGAGGTGTTGATATGTGACCTGTGTTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | CGCCCCGTGCGCGTGTGTGGCAGTAGTTACGCCGTCTaGAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPVRVCGSSYAV*SSTGTAWRRPH Trigger: GTGAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCACACACGCGCACGGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| 3UTR CCA 72 bp | AGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTaGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSYAVCSSTGTA*RRPHRRLLPFI Trigger: GATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAACAATTTTGGCTTCTaGGGAACAAAAACCGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: VAVVTPSAVAPALRGGGLNNFGF*GTKTAA Trigger: CGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGTT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCTGCTCTTACTACGTCAGCACGTTCAGTCTGTTCTCCTTGGGGCTCTGGAGCTGGCCTGCTTCTTTaGCTGACAGGGCCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SAALTTSARSVCSPWGSGAGLLL*LTGPHW Trigger: CCAGTGAGGCCCTGTCAGCAAAAGAAGCAGGCCAGC...TCCAGAGCCCCAAGGAGAACAGACTGAACGTGCTGACGTAGTAAGAGCAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR CCA 72 bp | CTCAGCTGGCGGGTGGTCTCTTTGGGATGCATACCGTaGACTCGGGACATATACCTTTCTTCACCTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSWRVVSLGCIP*TRDIYLSSPPP Trigger: TGGGGGAGGTGAAGAAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | TGTCGGGCCGTGCGTTTGACAGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCAGCTCGTGACACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRAVRLTDRSSS*KAAARPARDTC Trigger: ACACGTGTCACGAGCTGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATCTGTCAAACGCACGGCCCGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | GCTCTTACTACGTCAGCACGTTCAGTCTGTTCTCCTTaGGGCTCTGGACAAGGGGTTGAAGGCAGGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALTTSARSVCSP*GSGQGVEGRLS Trigger: TGAGAGCCTGCCTTCAACCCCTTGTCCAGAGCCCCAAGGAGAACAGACTGAACGTGCTGACGTAGTAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCGCTCTGGACAAGGGGTaGAAGGCAGGCTCTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFALDKG*KAGSHT Trigger: TGTGTGAGAGCCTGCCTTCAACCCCTTGTCCAGAGC...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR TCA 72 bp | GCAAGGGTAGCAGAACCAGTTGTCGGGCCGTGCGTTTaGCAGATAGAAGCAGTTCTTGCAAAGCTGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ARVAEPVVGPCV*QIEAVLAKLQL Trigger: GAGCTGCAGCTTTGCAAGAACTGCTTCTATCTGTCAAACGCACGGCCCGACAACTGGTTCTGCTACCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR TCA 72 bp | TTAGACTTCCAGAACCTTCCTTCACGGAGGAAGCGCTaGTGCAGTTCCAGCTCGTCACAGGCCTTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LDFQNLPSRRKR*CSSSSSQAFFQ Trigger: CTGGAAGAAGGCCTGTGACGAGCTGGAACTGCATCAGCGCTTCCTCCGTGAAGGAAGGTTCTGGAAGTCTAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| 3UTR GCA 72 bp | GCAGTGTTTCTCCCACTGTCTGCAGCCCTGGGACACTaGTTTACAACTGTGGCAGTGCATCCATACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AVFLPLSAALGH*FTTVAVHPYKL Trigger: CAGCTTGTATGGATGCACTGCCACAGTTGTAAAGCAGTGTCCCAGGGCTGCAGACAGTGGGAGAAACACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | CCATTCCTGCAGTGTTTCTCCCACTGTCTGCAGCCCTaGGACACTGCTTTACAACTGTGGCAGTGCATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PFLQCFSHCLQP*DTALQLWQCIH Trigger: ATGGATGCACTGCCACAGTTGTAAAGCAGTGTCCCAGGGCTGCAGACAGTGGGAGAAACACTGCAGGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR TCA 72 bp | CTTAGTTTCTTTTGCTTGCTGGCCTGCTTCTTTTGCTaGCAGGGCCTCACTGGTTTCCCTAGGATGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSFFCLLACFFC*QGLTGFPRMAL Trigger: CAGGGCCATCCTAGGGAAACCAGTGAGGCCCTGTCAGCAAAAGAAGCAGGCCAGCAAGCAAAAGAAACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR TCA 72 bp | TCACTGTGTTGTGGAGAAGCAGCTGTGCGTCAGCCTTaGACTCCTCGTAACTCCGGTACTTCCCCTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLCCGEAAVRQP*TPRNSGTSPHS Trigger: TGAATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | ACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGACATATACCTTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAKLSWRVVSLG*IPWTRDIYLSS Trigger: TGAAGAAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | GTGCTTCTTCTTAATGCTCTGCAGTGTGGGCAGGTGTaGCTCTCTGCTGCTCTTACTACGTCAGCACGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLLNALQCGQV*LSAALTTSARS Trigger: TGAACGTGCTGACGTAGTAAGAGCAGCAGAGAGCCACACCTGCCCACACTGCAGAGCATTAAGAAGAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| 3UTR CCA 72 bp | CTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTCGGGACATATACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSQLSSAGGWSL*DAYRGLGTYTF Trigger: AAAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCGCAGAATACGGACTTaGTACAAATCACGGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLRRIRT*YKSRHL Trigger: AAGATGCCGTGATTTGTACAAAGTCCGTATTCTGCG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAGGTCTATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: IKVYSPLLHSGDDEPQVGWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...ACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATAGACCTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAACAATTTTGGCTTCTaGGGAACAAAAACCGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTNNFGF*GTKTAA Trigger: CGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGTT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR TCA 72 bp | AGACTCTTTCCTCTTTCGATTGCCACCTGGACACTGTaGGGCGGGCAACTTACTTCCTTTTTGGGCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RLFPLSIATWTL*GGQLTSFLGST Trigger: TGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGGCAATCGAAAGAGGAAAGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| 3UTR GCA 72 bp | ATTCACTTCCATTCCTGCAGTGTTTCTCCCACTGTCTaGAGCCCTGGGACACTGCTTTACAACTGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: IHFHSCSVSPTV*SPGTLLYNCGS Trigger: ACTGCCACAGTTGTAAAGCAGTGTCCCAGGGCTGCAGACAGTGGGAGAAACACTGCAGGAATGGAAGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | AATGCCAGAGGGCATCATAGAACTGGACAGCCACAATaGTACTTACAGTGTGCAGAGCGGGACACTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: NARGHHRTGQPQ*YLQCAERDTQH Trigger: GTGTTGAGTGTCCCGCTCTGCACACTGTAAGTACCATTGTGGCTGTCCAGTTCTATGATGCCCTCTGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR CCA 72 bp | TCGACAATAAGACCATCTTTCACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGATGCATACCGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: STIRPSFTAKLS*RVVSLGCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | CCTGGACACTGTGAGGCGGGCAACTTACTTCCTTTTTaGGCTCCACACTCTGATTACGTCGTCCTTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PGHCEAGNLLPF*APHSDYVVLSL Trigger: CAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| 3UTR GCA 72 bp | TCCATAGAAGATCACTGTGTTGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTCGTAACTCCGGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SIEDHCVVEKQL*VSLELLVTPVL Trigger: AAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGATCTTCTATGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | TTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGACCTTCAGCTGCTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: FGLHTLITSSFL*SWLLSDLQLLV Trigger: AACGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGGTGCCTGTAAGCTATaGCAGTTCCTGTATAACCCG | + |
|
Preference number: 3 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLGACKL*QFLYNP Trigger: CGGGTTATACAGGAACTGCAATAGCTTACAGGCACC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTTGTATGGTAGGGACGTCAACAGCTGAGTGGACCAGCCTCCGGTACATAGTGCCCATTTCCTGCTaGTTAGAGTGCTTCTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSCMVGTSTAEWTSLRYIVPISC*LECFFL Trigger: TAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCAC...TATGTACCGGAGGCTGGTCCACTCAGCTGTTGACGTCCCTACCATACAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | CTGCAGCCCTGGGACACTGCTTTACAACTGTGGCAGTaGATCCATACAAGCTGTAAAACGTTTGAAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQPWDTALQLWQ*IHTSCKTFEDA Trigger: AGCATCTTCAAACGTTTTACAGCTTGTATGGATGCACTGCCACAGTTGTAAAGCAGTGTCCCAGGGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CCA 72 bp | CACTGTCTGCAGCCCTGGGACACTGCTTTACAACTGTaGCAGTGCATCCATACAAGCTGTAAAACGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HCLQPWDTALQL*QCIHTSCKTFE Trigger: TTCAAACGTTTTACAGCTTGTATGGATGCACTGCCACAGTTGTAAAGCAGTGTCCCAGGGCTGCAGACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGAACAATTTTGGCTTCTaGGGAACAAAAACCGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLNNFGF*GTKTAA Trigger: CGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGTT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAAACAATTTTGGCTTCTaGGGAACAAAAACCGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVNNFGF*GTKTAA Trigger: CGCAGCGGTTTTTGTTCCCAAGAAGCCAAAATTGTT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR TCA 72 bp | CACAATAACTTGCTCTCACAGGGGTGGATCAACGTCTaGAAACAATCAAAGACCGTCAAGTGTCCTTGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: HNNLLSQGWINV*KQSKTVKCPCS Trigger: CGAACAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAGAGCAAGTTATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR GCA 72 bp | AGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATaGAGCTATCAGGTAAATAGTACATACTCTGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: RQEAKVTGTSRS*SYQVNSTYSGM Trigger: CATTCCAGAGTATGTACTATTTACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR TCA 72 bp | TCTCTAAGCCTGAACTCATCAGACAAACACTTGGAATaGTACACACGAAAACACAGGTCACATATCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLNSSDKHLE*YTRKHRSHINT Trigger: GGTGTTGATATGTGACCTGTGTTTTCGTGTGTATCATTCCAAGTGTTTGTCTGATGAGTTCAGGCTTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR GCA 72 bp | ACAAATCACGGCATCTTTAATACAAGGAACGGAGCATaGATTCTCACTGTGTACAGTCAGGGATTTGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TNHGIFNTRNGA*ILTVYSQGFVS Trigger: ACTAACAAATCCCTGACTGTACACAGTGAGAATGCATGCTCCGTTCCTTGTATTAAAGATGCCGTGATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCTTCCGGCGGCAGGTaGGCTTGTGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSSGGR*ACALRA Trigger: GGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCGTGGCACATGCTCTaGCAGACGCCGTCGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSWHML*QTPSLV Trigger: GACGAGCGACGGCGTCTGTCAGAGCATGTGCCACGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCCGTCGCTCGTCGTCTaGGTGCTTCGATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLPSLVV*VLRCSI Trigger: AATGCTGCATCGAAGCACTCAGACGACGAGCGACGG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCTTGGTCTGGGAAATaGGCTGCTTGTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSWSGK*AACAAP Trigger: CGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLAPAGT*WSSRTC Trigger: ACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCAGGCTCTCTGGTGGTaGTGGCCAAAGAAGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLQALWW*WPKKRT Trigger: TGTTCGCTTCTTTGGCCATCACCACCAGAGAGCCTG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACTGGGCACTGCCAGTaGCTACTGCTGTCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTGHCQ*LLLSLS Trigger: GCTTAGAGACAGCAGTAGTCACTGGCAGTGCCCAGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVEKQL*VSLELL Trigger: GAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCTTCCGGCGGCAGGTaGGCTTGTGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSSGGR*ACALRA Trigger: GGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTGTTCCAGCAGCAGTaGTACATGGCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVFQQQ*YMASSS Trigger: TGAGGAGGAGGCCATGTACCACTGCTGCTGGAACAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTTTGCTCTTGGCTCTTaGGTGACCTTCAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLFALGS*VTFSCS Trigger: CGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCGTGGCACATGCTCTaGCAGACGCCGTCGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSWHML*QTPSLV Trigger: GACGAGCGACGGCGTCTGTCAGAGCATGTGCCACGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGGTGCGCTTGTGCTCTaGGTGCCAGTGCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLGALVL*VPVLLL Trigger: CAGCAGGAGCACTGGCACGCAGAGCACAAGCGCACC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTTCCGGCGGCAGGTaGGCTTGTGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSSGGR*ACALRA Trigger: GGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACGTCAACAGCTGAGTaGACCAGCCTCCGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTSTAE*TSLRYI Trigger: TATGTACCGGAGGCTGGTCCACTCAGCTGTTGACGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTTGGCTGAGGCATTGTaGGGATTTCCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLAEAL*GFPGWN Trigger: GTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAGCAGCAGTGGTACATaGCCTCCTCCTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSSSGT*PPPHSC Trigger: ACAACTGTGAGGAGGAGGCCATGTACCACTGCTGCT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGCGTGCCAGTGCTCCTaGTGGCACTTGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLACQCS*WHLMEQ Trigger: CTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGGTGCGCTTGTGCTCTaGGTGCCAGTGCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTGALVL*VPVLLL Trigger: CAGCAGGAGCACTGGCACGCAGAGCACAAGCGCACC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTGGTGGAGGAGATACTaGATTCTGCCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLWWRRY*ILPLPH Trigger: GTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGCTGCTCGTTACTGGTaGAGGAGATACTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLAARYW*RRYWIL Trigger: CAGAATCCAGTATCTCCTCCACCAGTAACGAGCAGC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTGGGGATTTCCTGGCTaGAACTCACTGCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLWGFPG*NSLLPF Trigger: AAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCTGTTTCCCGCTTGTaGTCCGACTTCATCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSVSRL*SDFILS Trigger: AGACAGGATGAAGTCGGACCACAAGCGGGAAACAGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGTCGCCCTGCAGGCTaGCCACAGCTTTGTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLCRPAG*PQLCSR Trigger: CCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAATGCTCCTGCAAACTaGGCACTGCCAGTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLNAPAN*ALPVTT Trigger: AGTAGTCACTGGCAGTGCCCAGTTTGCAGGAGCATT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTTGGGCTCCACACTCTaGTTACGTCGTCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLGSTL*LRRPFF Trigger: AAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCTTGGTCTGGGAAATaGGCTGCTTGTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSWSGK*AACAAP Trigger: CGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLAPAGT*WSSRTC Trigger: ACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLDRSSS*KAAARP Trigger: TGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGCGTGCCAGTGCTCCTaGTGGCACTTGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTACQCS*WHLMEQ Trigger: CTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGCTCTGCGTGCCAGTaGTCCTGCTGGCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLCSACQ*SCWHLM Trigger: CATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGTTCTCCTTGGGGCTCTGGACAAGGGGTTGAAGGCAGGCTCTCACACAGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVLLGALDKGLKAGSHTGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...TGTGTGAGAGCCTGCCTTCAACCCCTTGTCCAGAGCCCCAAGGAGAACAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCGGGTTCTTCCTTTTTaGGCTCCACACTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLRVLPF*APHSDY Trigger: GTAATCAGAGTGTGGAGCCCAAAAAGGAAGAACCCG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTGTCGCCCTGCAGGCTaGCCACAGCTTTGTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTCRPAG*PQLCSR Trigger: CCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCCGTCGCTCGTCGTCTaGGTGCTTCGATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTPSLVV*VLRCSI Trigger: AATGCTGCATCGAAGCACTCAGACGACGAGCGACGG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTTGGTCTGGGAAATaGGCTGCTTGTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSWSGK*AACAAP Trigger: CGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTAPAGT*WSSRTC Trigger: ACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTCTTGAGCGTACTTTaGGACTCTTTCCTCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVLSVL*DSFLFR Trigger: TCGAAAGAGGAAAGAGTCTCAAAGTACGCTCAAGAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCTCCGGTACATAGGATaGTTACTGTCCTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLRYIG*LLSFPF Trigger: GAAAGGAAAGGACAGTAAGCATCCTATGTACCGGAG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCTACAAACTCTTCCTTaGACTTCTCCTTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLQTLP*TSPSAA Trigger: AGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACGGCAGGTGCGCTTGTaGTCTGCGTGCCAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRRQVRL*SACQCS Trigger: GGAGCACTGGCACGCAGAGCACAAGCGCACCTGCCG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCGTTACTGGTGGAGGAGATACTGGATTCTGCCTCTTCCTCACCTCGGTCCGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLLVEEILDSASSSPRSGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...GGACCGAGGTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCAGTAACGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGTTCTCCTTGGGGCTCTGGACAAGGGGTTGAAGGCAGGCTCTCACACAACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVLLGALDKGLKAGSHTTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...TGTGTGAGAGCCTGCCTTCAACCCCTTGTCCAGAGCCCCAAGGAGAACAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCTGCATGACTTTGGCTaGCCAAAACCCAAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLHDFG*PKPKTF Trigger: AAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCGTGGCACATGCTCTaGCAGACGCCGTCGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSWHML*QTPSLV Trigger: GACGAGCGACGGCGTCTGTCAGAGCATGTGCCACGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCACTGGGCACTGCCAGTaGCTACTGCTGTCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTTGHCQ*LLLSLS Trigger: GCTTAGAGACAGCAGTAGTCACTGGCAGTGCCCAGT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VAVVTPSAVAPALRGGGLQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTVEKQL*VSLELL Trigger: GAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCAC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGGTGCGCTTGTGCTCTaGGTGCCAGTGCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRGALVL*VPVLLL Trigger: CAGCAGGAGCACTGGCACGCAGAGCACAAGCGCACC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCGGCAGGTGCGCTTGTaGTCTGCGTGCCAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLRQVRL*SACQCS Trigger: GGAGCACTGGCACGCAGAGCACAAGCGCACCTGCCG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCTTCCGGCGGCAGGTaGGCTTGTGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSSGGR*ACALRA Trigger: GGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCTTCCGGCGGCAGGTaGGCTTGTGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSSGGR*ACALRA Trigger: GGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACGTCAACAGCTGAGTaGACCAGCCTCCGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLTSTAE*TSLRYI Trigger: TATGTACCGGAGGCTGGTCCACTCAGCTGTTGACGT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGTGTTCCAGCAGCAGTaGTACATGGCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTVFQQQ*YMASSS Trigger: TGAGGAGGAGGCCATGTACCACTGCTGCTGGAACAC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR CAA 72 bp | GTTCAGTCTGTTCTCCTTGGGGCTCTGGACAAGGGGTaGAAGGCAGGCTCTCACACACTAGGAAAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQSVLLGALDKG*KAGSHTLGKLQ Trigger: CTGCAGCTTTCCTAGTGTGTGAGAGCCTGCCTTCAACCCCTTGTCCAGAGCCCCAAGGAGAACAGACTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCGTGGCACATGCTCTaGCAGACGCCGTCGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSWHML*QTPSLV Trigger: GACGAGCGACGGCGTCTGTCAGAGCATGTGCCACGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCTTACTACGTCAGCACGTTCAGTCTGTTCTCCTTGGGGCTCTGGACAACTGGGCACTGCCAGTaGCTACTGCTGTCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CCSYYVSTFSLFSLGLWTTGHCQ*LLLSLS Trigger: GCTTAGAGACAGCAGTAGTCACTGGCAGTGCCCAGT...TGTCCAGAGCCCCAAGGAGAACAGACTGAACGTGCTGACGTAGTAAGAGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCGCCTGCTCACTGTCTaGTCCATAGAAGATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLRLLTV*SIEDHC Trigger: ACAGTGATCTTCTATGGAGCAGACAGTGAGCAGGCG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGCGTGCCAGTGCTCCTaGTGGCACTTGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRACQCS*WHLMEQ Trigger: CTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGCTGCCCAAAGATGCTaGATAGCTTTTGTATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLAAQRC*IAFVSA Trigger: GGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCACGTCAACAGCTGAGTaGACCAGCCTCCGGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTTSTAE*TSLRYI Trigger: TATGTACCGGAGGCTGGTCCACTCAGCTGTTGACGT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGGTGGAGGAGATACTaGATTCTGCCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLWWRRY*ILPLPH Trigger: GTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGCTGCTCGTTACTGGTaGAGGAGATACTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLAARYW*RRYWIL Trigger: CAGAATCCAGTATCTCCTCCACCAGTAACGAGCAGC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGGGGATTTCCTGGCTaGAACTCACTGCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLWGFPG*NSLLPF Trigger: AAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGATTGTGGGGATTTCCTaGCTGGAACTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLIVGIS*LELTAS Trigger: GGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAAT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTTGGCTGAGGCATTGTaGGGATTTCCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLAEAL*GFPGWN Trigger: GTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGTCGCCCTGCAGGCTaGCCACAGCTTTGTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRCRPAG*PQLCSR Trigger: CCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAGCAGCAGTGGTACATaGCCTCCTCCTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSSSGT*PPPHSC Trigger: ACAACTGTGAGGAGGAGGCCATGTACCACTGCTGCT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTTGGGCTCCACACTCTaGTTACGTCGTCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLGSTL*LRRPFF Trigger: AAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACCGTCGCTCGTCGTCTaGGTGCTTCGATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRPSLVV*VLRCSI Trigger: AATGCTGCATCGAAGCACTCAGACGACGAGCGACGG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCTTGGTCTGGGAAATaGGCTGCTTGTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSWSGK*AACAAP Trigger: CGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGCCACCTGGACACTGTaGGGCGGGCAACTTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVATWTL*GGQLTS Trigger: GGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGGC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGTGTGGGCAGGTGTGGCTCTCTGCTGCTCTTACTACGTCAGCACGTTCCCCAGCTCTTCCTTGTaGGAGGTCAAGGTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVWAGVALCCSYYVSTFPSSSL*EVKVYF Trigger: GAAATAAACCTTGACCTCTCACAAGGAAGAGCTGGG...GAACGTGCTGACGTAGTAAGAGCAGCAGAGAGCCACACCTGCCCACACTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTGCGCTTCACGTGCAGTCGGTGAACATTGACCGTGATATCCTGGATGTTGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAALHVQSVNIDRDILDVVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...AACATCCAGGATATCACGGTCAATGTTCACCGACTGCACGTGAAGCGCAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLDRSSS*KAAARP Trigger: TGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGCGTGCCAGTGCTCCTaGTGGCACTTGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLACQCS*WHLMEQ Trigger: CTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGCTCTGCGTGCCAGTaGTCCTGCTGGCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRCSACQ*SCWHLM Trigger: CATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGCTGCCCAAAGATGCTaGATAGCTTTTGTATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTAAQRC*IAFVSA Trigger: GGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTGGTGGAGGAGATACTaGATTCTGCCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTWWRRY*ILPLPH Trigger: GTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCATTGTGGGGATTTCCTaGCTGGAACTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTIVGIS*LELTAS Trigger: GGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAAT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTTAACTTCTTGGTCTaGGTTGACACTGACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLNFLV*VDTDTL Trigger: GAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTGTCGCCCTGCAGGCTaGCCACAGCTTTGTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLCRPAG*PQLCSR Trigger: CCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| 3UTR CAA 72 bp | TCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACTCGGGACATATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFTAKLSWRVVS*GCIPWTRDIYL Trigger: AAGGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CAA 72 bp | TGCAAGGGTAGCAGAACCAGTTGTCGGGCCGTGCGTTaGACAGATAGAAGCAGTTCTTGCAAAGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKGSRTSCRAVR*TDRSSSCKAAA Trigger: AGCTGCAGCTTTGCAAGAACTGCTTCTATCTGTCAAACGCACGGCCCGACAACTGGTTCTGCTACCCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTTGGGCTCCACACTCTaGTTACGTCGTCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLGSTL*LRRPFF Trigger: AAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCCGTCGCTCGTCGTCTaGGTGCTTCGATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLPSLVV*VLRCSI Trigger: AATGCTGCATCGAAGCACTCAGACGACGAGCGACGG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACCGTCGCTCGTCGTCTaGGTGCTTCGATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVPSLVV*VLRCSI Trigger: AATGCTGCATCGAAGCACTCAGACGACGAGCGACGG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCTTGGTCTGGGAAATaGGCTGCTTGTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSWSGK*AACAAP Trigger: CGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVAPAGT*WSSRTC Trigger: ACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAACTGGGCACTGCCAGTaGCTACTGCTGTCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRTGHCQ*LLLSLS Trigger: GCTTAGAGACAGCAGTAGTCACTGGCAGTGCCCAGT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAGTTCCAGCTCGTCACAGGCCTTCTTCCAGCCCATGCTGCGCTTCACCAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMQFQLVTGLLPAHAALHQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...GTGAAGCGCAGCATGGGCTGGAAGAAGGCCTGTGACGAGCTGGAACTGCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTCCGGTACATAGGATaGTTACTGTCCTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLRYIG*LLSFPF Trigger: GAAAGGAAAGGACAGTAAGCATCCTATGTACCGGAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRVEKQL*VSLELL Trigger: GAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCAC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTDRSSS*KAAARP Trigger: TGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCTTCCAGCCCATGCTaGGCTTCACGTGCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSSSPC*ASRAVG Trigger: ACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTACAAACTCTTCCTTaGACTTCTCCTTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLQTLP*TSPSAA Trigger: AGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTGCTCTGCGTGCCAGTaGTCCTGCTGGCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLCSACQ*SCWHLM Trigger: CATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATGCTCTGCGTGCCAGTaGTCCTGCTGGCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVCSACQ*SCWHLM Trigger: CATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVGGWSL*DAYRGL Trigger: GAGTCCACGGTATGCATCCCAAAGAGACCACCCGCC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCGGGTTCTTCCTTTTTaGGCTCCACACTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTRVLPF*APHSDY Trigger: GTAATCAGAGTGTGGAGCCCAAAAAGGAAGAACCCG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTTAACTTCTTGGTCTaGGTTGACACTGACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLNFLV*VDTDTL Trigger: GAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGAAGCGAACATCCACTTaGTTGTCTTCTTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLKRTST*LSSFCM Trigger: CATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATTTGCTCTTGGCTCTTaGGTGACCTTCAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRFALGS*VTFSCS Trigger: CGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGACAAACACTTGGAATaGTACACACGAAAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLDKHLE*YTRKHR Trigger: CCTGTGTTTTCGTGTGTATCATTCCAAGTGTTTGTC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLDNFNG*PKMLDS Trigger: GCTATCCAGCATCTTTGGGCAGCCATTGAAATTATC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | GGAGACGATGAACCTCAAGTAGGTGCCCATTTCCTGCTTGTTAGAGTGCTTCTTGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDDEPQVGAHFLLVRVLLVVSLG*IPWTRD Trigger: GTCCCGAGTCCACGGTATGCATCCCAAAGAGACCAC...AAGAAGCACTCTAACAAGCAGGAAATGGGCACCTACTTGAGGTTCATCGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVVEKQL*VSLELL Trigger: GAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCAC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCATGACTTTGGCTaGCCAAAACCCAAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLHDFG*PKPKTF Trigger: AAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCCTTTCTTTGCTCTTaGCTCTTGAGTGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSFLCS*LLSDLQ Trigger: CTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATTGGCTGAGGCATTGTaGGGATTTCCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLAEAL*GFPGWN Trigger: GTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAGGCACTTAACTTCTTaGTCTGGGTTGACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTRHLTS*SGLTLT Trigger: TGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAAGCAGCAGTGGTACATaGCCTCCTCCTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSSSGT*PPPHSC Trigger: ACAACTGTGAGGAGGAGGCCATGTACCACTGCTGCT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGTGTTCCAGCAGCAGTaGTACATGGCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLVFQQQ*YMASSS Trigger: TGAGGAGGAGGCCATGTACCACTGCTGCTGGAACAC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGTGTTCCAGCAGCAGTaGTACATGGCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVVFQQQ*YMASSS Trigger: TGAGGAGGAGGCCATGTACCACTGCTGCTGGAACAC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | GTCTATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTATTTCCCTGCAAACTaGGCACTGCCAGTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: VYSPLLHSGDDEPQVGAHYFPAN*ALPVTT Trigger: AGTAGTCACTGGCAGTGCCCAGTTTGCAGGGAAATA...ATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAAGCGAACATCCACTTaGTTGTCTTCTTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTKRTST*LSSFCM Trigger: CATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATTTGCTCTTGGCTCTTaGGTGACCTTCAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVFALGS*VTFSCS Trigger: CGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTTTGCTCTTGGCTCTTaGGTGACCTTCAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLFALGS*VTFSCS Trigger: CGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTDNFNG*PKMLDS Trigger: GCTATCCAGCATCTTTGGGCAGCCATTGAAATTATC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTCTTACTACGTCAGCACGTTCAGTCTGTTCTCCTTGGGGCTCTGGACCAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLRQHVQSVLLGALDQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...GTCCAGAGCCCCAAGGAGAACAGACTGAACGTGCTGACGTAGTAAGAGCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR GCA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCCAAGGTTTATTTCCCTaGAAACTGGGCACTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFQGLFP*KLGTAS Trigger: ACTGGCAGTGCCCAGTTTGCAGGGAAATAAACCTTG...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGCTGCCCAAAGATGCTaGATAGCTTTTGTATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRAAQRC*IAFVSA Trigger: GGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGGTGGAGGAGATACTaGATTCTGCCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRWWRRY*ILPLPH Trigger: GTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGCTGCTCGTTACTGGTaGAGGAGATACTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRAARYW*RRYWIL Trigger: CAGAATCCAGTATCTCCTCCACCAGTAACGAGCAGC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGGGGATTTCCTGGCTaGAACTCACTGCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRWGFPG*NSLLPF Trigger: AAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAATTGTGGGGATTTCCTaGCTGGAACTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRIVGIS*LELTAS Trigger: GGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAAT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTTGGCTGAGGCATTGTaGGGATTTCCTGGCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLAEAL*GFPGWN Trigger: GTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCTGTTTCCCGCTTGTaGTCCGACTTCATCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSVSRL*SDFILS Trigger: AGACAGGATGAAGTCGGACCACAAGCGGGAAACAGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGAGCAGCAGTGGTACATaGCCTCCTCCTCACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSSSGT*PPPHSC Trigger: ACAACTGTGAGGAGGAGGCCATGTACCACTGCTGCT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAAATGCTCCTGCAAACTaGGCACTGCCAGTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRNAPAN*ALPVTT Trigger: AGTAGTCACTGGCAGTGCCCAGTTTGCAGGAGCATT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR TCA 90 bp | GTCTATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATGACAAACACTTGGAATaGTACACACGAAAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSPLLHSGDDEPQVGAHDKHLE*YTRKHR Trigger: CCTGTGTTTTCGTGTGTATCATTCCAAGTGTTTGTC...ATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCGCCTGCTCACTGTCTaGTCCATAGAAGATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLRLLTV*SIEDHC Trigger: ACAGTGATCTTCTATGGAGCAGACAGTGAGCAGGCG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGCTGCCCAAAGATGCTaGATAGCTTTTGTATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLAAQRC*IAFVSA Trigger: GGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | AACTTACTTCCTTTTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTGCTCACAGCTAAGCTCAGCTaGCGGGTGGTCTCTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLLPFWAPHSDYVVLSLLTAKLS*RVVSLG Trigger: TCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT...GAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATGGTGGAGGAGATACTaGATTCTGCCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVWWRRY*ILPLPH Trigger: GTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATGGGGATTTCCTGGCTaGAACTCACTGCTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVWGFPG*NSLLPF Trigger: AAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGATTGTGGGGATTTCCTaGCTGGAACTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLIVGIS*LELTAS Trigger: GGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAAT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAATTGTGGGGATTTCCTaGCTGGAACTCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVIVGIS*LELTAS Trigger: GGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAAT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTTAACTTCTTGGTCTaGGTTGACACTGACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLNFLV*VDTDTL Trigger: GAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCTGTTTCCCGCTTGTaGTCCGACTTCATCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSVSRL*SDFILS Trigger: AGACAGGATGAAGTCGGACCACAAGCGGGAAACAGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAAATGCTCCTGCAAACTaGGCACTGCCAGTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVNAPAN*ALPVTT Trigger: AGTAGTCACTGGCAGTGCCCAGTTTGCAGGAGCATT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATTGGGCTCCACACTCTaGTTACGTCGTCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVLGSTL*LRRPFF Trigger: AAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTCCGGTACATAGGATaGTTACTGTCCTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLRYIG*LLSFPF Trigger: GAAAGGAAAGGACAGTAAGCATCCTATGTACCGGAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVDRSSS*KAAARP Trigger: TGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGATAGAAGCAGTTCTTaGAAAGCTGCAGCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLDRSSS*KAAARP Trigger: TGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVTSSFL*SWLLSD Trigger: GTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTACAAACTCTTCCTTaGACTTCTCCTTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLQTLP*TSPSAA Trigger: AGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTGCATGACTTTGGCTaGCCAAAACCCAAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLHDFG*PKPKTF Trigger: AAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCAGCTGCTCGTTACTaGTGGAGGAGATACTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSAARY*WRRYWI Trigger: AATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACGGGTTCTTCCTTTTTaGGCTCCACACTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVRVLPF*APHSDY Trigger: GTAATCAGAGTGTGGAGCCCAAAAAGGAAGAACCCG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCGGGTTCTTCCTTTTTaGGCTCCACACTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLRVLPF*APHSDY Trigger: GTAATCAGAGTGTGGAGCCCAAAAAGGAAGAACCCG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTTAACTTCTTGGTCTaGGTTGACACTGACACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLNFLV*VDTDTL Trigger: GAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAAGGCACTTAACTTCTTaGTCTGGGTTGACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRRHLTS*SGLTLT Trigger: TGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAAAGCGAACATCCACTTaGTTGTCTTCTTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRKRTST*LSSFCM Trigger: CATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGACAAACACTTGGAATaGTACACACGAAAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRDKHLE*YTRKHR Trigger: CCTGTGTTTTCGTGTGTATCATTCCAAGTGTTTGTC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGACTGGGCCTTAACTTaGCGGATATTACTTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLDWALT*RILLDC Trigger: ACAGTCAAGTAATATCCGTCAAGTTAAGGCCCAGTC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: STIDPFLPVTLLKQTPRRDNFNG*PKMLDS Trigger: GCTATCCAGCATCTTTGGGCAGCCATTGAAATTATC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTACAAACTCTTCCTTaGACTTCTCCTTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLQTLP*TSPSAA Trigger: AGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTCTCTAAGCCTGAACTCATCAGACAAACACTTGGAATGATACACACGGCTGCCCAAAGATGCTaGATAGCTTTTGTATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAVSKPELIRQTLGMIHTAAQRC*IAFVSA Trigger: GGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGC...CGTGTGTATCATTCCAAGTGTTTGTCTGATGAGTTCAGGCTTAGAGACAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000157035.9 ENSMUST00000222358.2 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTGCATGACTTTGGCTaGCCAAAACCCAAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLHDFG*PKPKTF Trigger: AAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCCTTTCTTTGCTCTTaGCTCTTGAGTGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSFLCS*LLSDLQ Trigger: CTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCCTTTCTTTGCTCTTaGCTCTTGAGTGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSFLCS*LLSDLQ Trigger: CTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGAGGCACTTAACTTCTTaGTCTGGGTTGACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLRHLTS*SGLTLT Trigger: TGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGAAGCGAACATCCACTTaGTTGTCTTCTTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLKRTST*LSSFCM Trigger: CATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLDNFNG*PKMLDS Trigger: GCTATCCAGCATCTTTGGGCAGCCATTGAAATTATC...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVDNFNG*PKMLDS Trigger: GCTATCCAGCATCTTTGGGCAGCCATTGAAATTATC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACAGCTTTTGAACCTTTaGAGCCCACTGTTAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVQLLNL*SPLLEF Trigger: AAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAAACTTACTTCCTTTTTaGGCTCCACACTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVNLLPF*APHSDY Trigger: GTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGAGTTTCGACAATAAGACCATCTTTCACAGCTAAGCTCAGCTGGCGGAGCCAATTCTGCATGTaGAAGGAAGGCCTTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVRVSTIRPSFTAKLSWRSQFCM*KEGLCN Trigger: ATTACAAAGGCCTTCCTTCCACATGCAGAATTGGCT...CCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGAAACTCTAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| 3UTR CAA 72 bp | CAATATCCTTCCTGTTCAATACCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTTTCGACAATAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QYPSCSIPAFEP*QPTVRVSTIRP Trigger: TGGTCTTATTGTCGAAACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAACAGGAAGGATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCGGCGGCAGGTGCGCTaGTGCTCTGCGTGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLRRQVR*CSACQC Trigger: GCACTGGCACGCAGAGCACAAGCGCACCTGCCGCCG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCGGCGGCAGGTGCGCTaGTGCTCTGCGTGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLRRQVR*CSACQC Trigger: GCACTGGCACGCAGAGCACAAGCGCACCTGCCGCCG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCGGCGGCAGGTGCGCTaGTGCTCTGCGTGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTRRQVR*CSACQC Trigger: GCACTGGCACGCAGAGCACAAGCGCACCTGCCGCCG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS TCA 90 bp | GGCAGGTGCGCTTGTGCTCTGCGTGCCAGTGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGTTCCAGCAGCAGTGGTACATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRCACALRASAPAGT*WSSRTCSSSSGTWP Trigger: AGGCCATGTACCACTGCTGCTGGAACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCACAAGCGCACCTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
||
| CDS CCA 90 bp | GATTTCCTGGCTGGAACTCACTGCTTCCGTTTCTGGCTCGGGTTCTaGGGACGGAGACTGTGCACTGGCGTGCTGGTCGAGCAGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFLAGTHCFRFWLGF*GRRLCTGVLVEQQS Trigger: GGACTGCTGCTCGACCAGCACGCCAGTGCACAGTCTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLSVSR*WSDFIL Trigger: CAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS CCA 90 bp | AGGCATTGTGGGGATTTCCTGGCTGGAACTCACTGCTTCCGTTTCTaGCTCGGGTTCTGGGGACGGAGACTGTGCACTGGCGTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHCGDFLAGTHCFRF*LGFWGRRLCTGVLV Trigger: GACCAGCACGCCAGTGCACAGTCTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCCACCACTGCTTCTTCTaGGTCTGGGAAATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLHHCFF*VWEMSC Trigger: GCAGCTCATTTCCCAGACCAAGAAGAAGCAGTGGTG...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCACTTCTTGGTCTGGGTaGACACTGACACCCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLTSWSG*TLTPSQ Trigger: TTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGAGGCACTTAACTTCTaGGTCTGGGTTGACACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLEALNF*VWVDTD Trigger: GTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLCAASF*ISSTNS Trigger: AGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACGGCGGCAGGTGCGCTaGTGCTCTGCGTGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRRRQVR*CSACQC Trigger: GCACTGGCACGCAGAGCACAAGCGCACCTGCCGCCG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS CCA 90 bp | CTGACACCCTCTCAATTGGCTGAGGCATTGTGGGGATTTCCTGGCTaGAACTCACTGCTTCCGTTTCTGGCTCGGGTTCTGGGGACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTPSQLAEALWGFPG*NSLLPFLARVLGTE Trigger: CTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTTCAATACCAGCTTTaGAACCTTTGCAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVQYQL*NLCSPL Trigger: CAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCTCTACAAACTCTTCCTaGCACTTCTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLSTNSS*HFSFSC Trigger: GCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGA...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGGGAAATGAGCTGCTaGTGCTGCGCCGCTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLWEMSC*CCAASF Trigger: GAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS GCA 90 bp | TGTCGTGGCACATGCTCTGACAGACGCCGTCGCTCGTCGTCTGAGTaGTTCGATGCAGCATTCGTGGGGAAGAGGCACTTAACTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRGTCSDRRRRSSSE*FDAAFVGKRHLTSW Trigger: CCAAGAAGTTAAGTGCCTCTTCCCCACGAATGCTGCATCGAAGCACTCAGACGACGAGCGACGGCGTCTGTCAGAGCATGTGCCACGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 90 bp | CTCAATTGGCTGAGGCATTGTGGGGATTTCCTGGCTGGAACTCACTaGTTCCGTTTCTGGCTCGGGTTCTGGGGACGGAGACTGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LNWLRHCGDFLAGTH*FRFWLGFWGRRLCT Trigger: AGTGCACAGTCTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCGTGCCCATTTCCTGCTaGTTAGAGTGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLVPISC*LECFFL Trigger: TAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCAC...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTGACACCCTCTCAATaGGCTGAGGCATTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLTPSQ*AEALWG Trigger: TCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLSVSR*WSDFIL Trigger: CAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GTCTATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VYSPLLHSGDDEPQVGAHWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...ATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACACCCTCTCAATaGGCTGAGGCATTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLTPSQ*AEALWG Trigger: TCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCACCACTGCTTCTTCTaGGTCTGGGAAATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLHHCFF*VWEMSC Trigger: GCAGCTCATTTCCCAGACCAAGAAGAAGCAGTGGTG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGACTTCTTGGTCTGGGTaGACACTGACACCCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLTSWSG*TLTPSQ Trigger: TTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLCAASF*ISSTNS Trigger: AGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCACCACTGCTTCTTCTaGGTCTGGGAAATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTHHCFF*VWEMSC Trigger: GCAGCTCATTTCCCAGACCAAGAAGAAGCAGTGGTG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS GCA 90 bp | CTCAATTGGCTGAGGCATTGTGGGGATTTCCTGGCTGGAACTCACTaGTTCCGTTTCTGGCTCGGGTTCTTCCTTTTTGGGCTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: LNWLRHCGDFLAGTH*FRFWLGFFLFGLHT Trigger: AGTGTGGAGCCCAAAAAGGAAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGCCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGTTCAATACCAGCTTTaGAACCTTTGCAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLVQYQL*NLCSPL Trigger: CAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAAC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GTGGCAGTAGTTACGCCGTCTGCAGTAGCACCGGCACTGCGTGGAGGAGGCCTCAAGTCATTAAAAATTTaGGTGTACTTGTCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VAVVTPSAVAPALRGGGLKSLKI*VYLSWH Trigger: GTGCCACGACAAGTACACCAAAATTTTTAATGACTT...GAGGCCTCCTCCACGCAGTGCCGGTGCTACTGCAGACGGCGTAACTACTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCTACAAACTCTTCCTaGCACTTCTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSTNSS*HFSFSC Trigger: GCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTCAASF*ISSTNS Trigger: AGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGGGAAATGAGCTGCTaGTGCTGCGCCGCTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRWEMSC*CCAASF Trigger: GAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTTTCCTCTTTCGATaGCCACCTGGACACTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSFLFR*PPGHCE Trigger: CTCACAGTGTCCAGGTGGCAATCGAAAGAGGAAAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
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| CDS TCA 90 bp | TCACAGGCCTTCTTCCAGCCCATGCTGCGCTTCACGTGCAGTCGGTaGACATTGACCGTGATATCCTGGATGTTTTCAGAAGGAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQAFFQPMLRFTCSR*TLTVISWMFSEGIQ Trigger: CTGGATTCCTTCTGAAAACATCCAGGATATCACGGTCAATGTTCACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGAAGGCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS TCA 90 bp | CATAGAAGATCACTGTGTTGTGGAGAAGCAGCTGTGCGTCAGCCTTaGACTCCTCGTAACTCCGGTACTTCCCCTCATTCACCTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRRSLCCGEAAVRQP*TPRNSGTSPHSPSA Trigger: AGCGGAAGGTGAATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGATCTTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110635.8 ENSMUST00000222475.2 |
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| CDS GCA 90 bp | TTCTTGATCTCCTCTACAAACTCTTCCTTGCACTTCTCCTTCAGCTaGTTACCCTTTCTGTCCATGTCGCCCTGCAGGCTGGCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLISSTNSSLHFSFS*LPFLSMSPCRLATA Trigger: AGCTGTGGCCAGCCTGCAGGGCGACATGGACAGAAAGGGTAAGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGAGGAGATCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVWRVVS*GCIPWT Trigger: AGTCCACGGTATGCATCCCAAAGAGACCACCCGCCA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CCACCTGGACACTGTGAGGCGGGCAACTTACTTCCTTTTTGGGCTCCACACTCTCCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPGHCEAGNLLPFWAPHSPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...AGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGGTGCCCATTTCCTGCTaGTTAGAGTGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLVPISC*LECFFL Trigger: TAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCAC...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGTCTTTCTGCATGACTTaGGCTGGCCAAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLSFCMT*AGQNPK Trigger: TTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGA...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLSVSR*WSDFIL Trigger: CAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTACAAACTCTTCCTaGCACTTCTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSTNSS*HFSFSC Trigger: GCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS TCA 90 bp | CTTAACTTCTTGGTCTGGGTTGACACTGACACCCTCTCAATTGGCTaGGGCATTGTGGGGATTTCCTGGCTGGAACTCACTGCTTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LNFLVWVDTDTLSIG*GIVGISWLELTASV Trigger: AACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
||
| CDS GCA 90 bp | CTCACTGTCTCCATAGAAGATCACTGTGTTGTGGAGAAGCAGCTGTaGGTCAGCCTTGAACTCCTCGTAACTCCGGTACTTCCCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LTVSIEDHCVVEKQL*VSLELLVTPVLPLI Trigger: AATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTGCTTCTCCACAACACAGTGATCTTCTATGGAGACAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223421.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCGTGCCCATTTCCTGCTaGTTAGAGTGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTVPISC*LECFFL Trigger: TAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCAC...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTCTTTCTGCATGACTTaGGCTGGCCAAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTSFCMT*AGQNPK Trigger: TTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGACTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACTGACACCCTCTCAATaGGCTGAGGCATTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVLTPSQ*AEALWG Trigger: TCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTGACACCCTCTCAATaGGCTGAGGCATTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLTPSQ*AEALWG Trigger: TCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLSVSR*WSDFIL Trigger: CAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVLSVSR*WSDFIL Trigger: CAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCTGTCTTGAGCGTACTTaGAGACTCTTTCCTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTCLERT*RLFPLS Trigger: CGAAAGAGGAAAGAGTCTCAAAGTACGCTCAAGACA...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | TATAGCCCGCTCCTTCATTCGGGAGACGATGAACCTCAAGTAGGTGCCCATTTCGTTCAATACCAGCTTTaGAACCTTTGCAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YSPLLHSGDDEPQVGAHFVQYQL*NLCSPL Trigger: CAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAAC...GAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCTTTGCTCTTGGCTCTaGAGTGACCTTCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLLCSWL*SDLQLL Trigger: GAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGAGGCACTTAACTTCTaGGTCTGGGTTGACACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRREALNF*VWVDTD Trigger: GTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRCAASF*ISSTNS Trigger: AGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACACCACTGCTTCTTCTaGGTCTGGGAAATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVHHCFF*VWEMSC Trigger: GCAGCTCATTTCCCAGACCAAGAAGAAGCAGTGGTG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCACCACTGCTTCTTCTaGGTCTGGGAAATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLHHCFF*VWEMSC Trigger: GCAGCTCATTTCCCAGACCAAGAAGAAGCAGTGGTG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS GCA 90 bp | CCATCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGACATATACTTTGTAATACGATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSFTAKLSWRVVSLG*IPWTRDIYFVIRSM Trigger: CATTGATCGTATTACAAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 90 bp | TTCTTCCTTTTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTaGTCTTGGCTCTTGAGTGACCTTCAGCTGCTCGTTACTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FFLFGLHTLITSSFL*SWLLSDLQLLVTGG Trigger: TCCACCAGTAACGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTAGTTTCTTTTGCTTGCTGGCCTGCTTCTTTTGCTGACAGGGCCTCACTGCCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVSFACWPASFADRASLPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...CAGTGAGGCCCTGTCAGCAAAAGAAGCAGGCCAGCAAGCAAAAGAAACTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140180.2 |
||
| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAGTTCAATACCAGCTTTaGAACCTTTGCAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRVQYQL*NLCSPL Trigger: CAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAAC...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAACTTCTTGGTCTGGGTaGACACTGACACCCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVTSWSG*TLTPSQ Trigger: TTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGACTTCTTGGTCTGGGTaGACACTGACACCCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLTSWSG*TLTPSQ Trigger: TTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGT...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGAGGCACTTAACTTCTaGGTCTGGGTTGACACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVEALNF*VWVDTD Trigger: GTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCCTGAAGTCATTAAAAATTTaGGTGTACTTGTCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AWRRPHRRLLPFIFRVTLKSLKI*VYLSWH Trigger: GTGCCACGACAAGTACACCAAAATTTTTAATGACTT...CAGGGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTACCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGCCAGCTTTTGAACCTTaGCAGCCCACTGTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLPAFEP*QPTVRV Trigger: AACTCTAACAGTGGGCTGCAAAGGTTCAAAAGCTGG...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGGGCTCCACACTCTGATTACGTCGTCCTTTCTTTGCTCTTGGCTCTTGAGGTTCAATACCAGCTTTaGAACCTTTGCAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FWAPHSDYVVLSLLLALEVQYQL*NLCSPL Trigger: CAGTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAAC...CTCAAGAGCCAAGAGCAAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220996.2 |
||
| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGATCTTTCTGCATGACTTaGGCTGGCCAAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRSFCMT*AGQNPK Trigger: TTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGA...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGGAGGAGGCCTCACAGACGGCTCCTTCCTTTCATCTTTAGAGTGACCAAGTCATTAAAAATTTaGGTGTACTTGTCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAWRRPHRRLLPFIFRVTKSLKI*VYLSWH Trigger: GTGCCACGACAAGTACACCAAAATTTTTAATGACTT...GGTCACTCTAAAGATGAAAGGAAGGAGCCGTCTGTGAGGCCTCCTCCACGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCTACAAACTCTTCCTaGCACTTCTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSTNSS*HFSFSC Trigger: GCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAGTGCCCATTTCCTGCTaGTTAGAGTGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVVPISC*LECFFL Trigger: TAAGAAGAAGCACTCTAACAAGCAGGAAATGGGCAC...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | CTCACAGGGGTGGATCAACGTCTGAAAACAATCAAAGACCGTCAAGTGTCCTTGTCTTTCTGCATGACTTaGGCTGGCCAAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTGVDQRLKTIKDRQVSLSFCMT*AGQNPK Trigger: TTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGA...CAAGGACACTTGACGGTCTTTGATTGTTTTCAGACGTTGATCCACCCCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTATCTTTCTGCATGACTTaGGCTGGCCAAAACCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVSFCMT*AGQNPK Trigger: TTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGA...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | TCAACTATCGATCCATTCCTACCAGTAACGCTGCTTAAGCAGACACCCCGCAGAAAGTCATTAAAAATTTaGGTGTACTTGTCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STIDPFLPVTLLKQTPRRKSLKI*VYLSWH Trigger: GTGCCACGACAAGTACACCAAAATTTTTAATGACTT...TCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGAATGGATCGATAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS-3UTR CAA 90 bp | CAGAGACAAGAAGCCAAAGTAACAGGGACCTCACGTTCATGCAGCTATCAGGTAAAGTCATTAAAAATTTaGGTGTACTTGTCGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAKVTGTSRSCSYQVKSLKI*VYLSWH Trigger: GTGCCACGACAAGTACACCAAAATTTTTAATGACTT...TACCTGATAGCTGCATGAACGTGAGGTCCCTGTTACTTTGGCTTCTTGTCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 |
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| CDS TCA 90 bp | GGAAGGAAGGCCTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGCTGGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRKAFVIRSMLAICF*FLIISMAAQRCWIA Trigger: AGCTATCCAGCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGGCCTTCCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
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| CDS TCA 90 bp | CGGGACATATACTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGCTGGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDIYFVIRSMLAICF*FLIISMAAQRCWIA Trigger: AGCTATCCAGCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGTATATGTCCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS TCA 90 bp | TGTTTCCCAGTCTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGCTGGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFPVFVIRSMLAICF*FLIISMAAQRCWIA Trigger: AGCTATCCAGCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGACTGGGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222358.2 |
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| CDS CCA 72 bp | GCTGGAACTCACTGCTTCCGTTTCTGGCTCGGGTTCTaGGGACGGAGACTGTGCACTGGCGTGCTGGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGTHCFRFWLGF*GRRLCTGVLVE Trigger: CTCGACCAGCACGCCAGTGCACAGTCTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
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| CDS CCA 72 bp | GGGGATTTCCTGGCTGGAACTCACTGCTTCCGTTTCTaGCTCGGGTTCTGGGGACGGAGACTGTGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GDFLAGTHCFRF*LGFWGRRLCTG Trigger: GCCAGTGCACAGTCTCCGTCCCCAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110633.8 ENSMUST00000110638.8 |
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| CDS TCA 72 bp | GCTTGTGCTCTGCGTGCCAGTGCTCCTGCTGGCACTTaGTGGAGCAGTAGGACGTGTTCCAGCAGCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ACALRASAPAGT*WSSRTCSSSSG Trigger: ACCACTGCTGCTGGAACACGTCCTACTGCTCCATCAAGTGCCAGCAGGAGCACTGGCACGCAGAGCACAAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS GCA 72 bp | ACATGCTCTGACAGACGCCGTCGCTCGTCGTCTGAGTaGTTCGATGCAGCATTCGTGGGGAAGAGGCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: TCSDRRRRSSSE*FDAAFVGKRHL Trigger: TAAGTGCCTCTTCCCCACGAATGCTGCATCGAAGCACTCAGACGACGAGCGACGGCGTCTGTCAGAGCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 72 bp | TCCTTCAGCTGCTTACCCTTTCTGTCCATGTCGCCCTaGAGGCTGGCCACAGCTTTGTTCACGGCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFSCLPFLSMSP*RLATALFTACL Trigger: AAGACAGGCCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACATGGACAGAAAGGGTAAGCAGCTGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS CCA 72 bp | GGGGATTTCCTGGCTGGAACTCACTGCTTCCGTTTCTaGCTCGGGTTCTTCCTTTTTGGGCTCCACACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDFLAGTHCFRF*LGFFLFGLHTL Trigger: CAGAGTGTGGAGCCCAAAAAGGAAGAACCCGAGCCAGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS TCA 72 bp | TTGGTCTGGGTTGACACTGACACCCTCTCAATTGGCTaGGGCATTGTGGGGATTTCCTGGCTGGAACTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVWVDTDTLSIG*GIVGISWLELT Trigger: AGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAGTGTCAACCCAGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 72 bp | TCCTCTACAAACTCTTCCTTGCACTTCTCCTTCAGCTaGTTACCCTTTCTGTCCATGTCGCCCTGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTNSSLHFSFS*LPFLSMSPCRL Trigger: CAGCCTGCAGGGCGACATGGACAGAAAGGGTAAGCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS CCA 72 bp | CTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTaGGATGCATACCGTGGACTCGGGACATATACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSQLSSAGGWSL*DAYRGLGTYTL Trigger: CAAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CAA 72 bp | CGATGCAGCATTCGTGGGGAAGAGGCACTTAACTTCTaGGTCTGGGTTGACACTGACACCCTCTCAATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSIRGEEALNF*VWVDTDTLSIG Trigger: GCCAATTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTCTTCCCCACGAATGCTGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CAA 90 bp | GATGCAGCATTCGTGGGGAAGAGGCACTTAACTTCTTGGTCTGGGTaGACACTGACACCCTCTCAATTGGCTGAGGCATTGTGGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: DAAFVGKRHLTSWSG*TLTPSQLAEALWGF Trigger: AAATCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTCTTCCCCACGAATGCTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CAA 90 bp | TTCTTGGTCTGGGAAATGAGCTGCTTGTGCTGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCTTCCTTGCACTTCTCCTTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLVWEMSCLCCAASF*ISSTNSSLHFSFSC Trigger: GCAGCTGAAGGAGAAGTGCAAGGAAGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS GCA 72 bp | CACTGCTTCTTCTTGGTCTGGGAAATGAGCTGCTTGTaGTGCGCCGCTAGCTTCTTGATCTCCTCTACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HCFFLVWEMSCL*CAASFLISSTN Trigger: GTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGAAGAAGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS CCA 72 bp | GATGCAGCATTCGTGGGGAAGAGGCACTTAACTTCTTaGTCTGGGTTGACACTGACACCCTCTCAATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DAAFVGKRHLTS*SGLTLTPSQLA Trigger: AGCCAATTGAGAGGGTGTCAGTGTCAACCCAGACCAAGAAGTTAAGTGCCTCTTCCCCACGAATGCTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CCA 72 bp | TTTCTGTTTCCCAGTCCTTGTTTGGGGCTGCTGTCCTaGAGAAAGGCTGCGTACTGTAGGCAATCTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLFPSPCLGLLS*RKAAYCRQSHL Trigger: GAGATGAGATTGCCTACAGTACGCAGCCTTTCTCCAGGACAGCAGCCCCAAACAAGGACTGGGAAACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130151.8 |
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| CDS CAA 72 bp | TCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACTCGGGACATATACTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFTAKLSWRVVS*GCIPWTRDIYF Trigger: AAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CAA 72 bp | TGGGAAATGAGCTGCTTGTGCTGCGCCGCTAGCTTCTaGATCTCCTCTACAAACTCTTCCTTGCACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WEMSCLCCAASF*ISSTNSSLHFS Trigger: GGAGAAGTGCAAGGAAGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS TCA 72 bp | TTCTTCCAGCCCATGCTGCGCTTCACGTGCAGTCGGTaGACATTGACCGTGATATCCTGGATGTTTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FFQPMLRFTCSR*TLTVISWMFSE Trigger: TTCTGAAAACATCCAGGATATCACGGTCAATGTTCACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 72 bp | ACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTTGGGATaGATACCGTGGACTCGGGACATATACTTTGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: TAKLSWRVVSLG*IPWTRDIYFVI Trigger: TATTACAAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS GCA 72 bp | TGCTTCTTCTTGGTCTGGGAAATGAGCTGCTTGTGCTaGGCCGCTAGCTTCTTGATCTCCTCTACAAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFFLVWEMSCLC*AASFLISSTNS Trigger: AGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGAAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS CCA 72 bp | CTCAGCTGGCGGGTGGTCTCTTTGGGATGCATACCGTaGACTCGGGACATATACTTTGTAATACGATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSWRVVSLGCIP*TRDIYFVIRSM Trigger: CATTGATCGTATTACAAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CAA 72 bp | TCCAGCGCTTCACGGACCACTCTCTCTGTTTCCCGCTaGTGGTCCGACTTCATCCTGTCTTTAAAGTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: SSASRTTLSVSR*WSDFILSLKSL Trigger: TAATGACTTTAAAGACAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAGAGTGGTCCGTGAAGCGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS CAA 90 bp | ATAAGACCATCTTTCACAGCTAAGCTCAGCTGGCGGGTGGTCTCTTaGGGATGCATACCGTGGACTCGGGACATATACTTTGTAATACGA | + |
|
Preference number: 6 (lower is better) Translates to: IRPSFTAKLSWRVVS*GCIPWTRDIYFVIR Trigger: TCGTATTACAAAGTATATGTCCCGAGTCCACGGTATGCATCCCAAAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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| CDS CCA 72 bp | AGCGCTTCACGGACCACTCTCTCTGTTTCCCGCTTGTaGTCCGACTTCATCCTGTCTTTAAAGTCATTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SASRTTLSVSRL*SDFILSLKSLK Trigger: TTTTAATGACTTTAAAGACAGGATGAAGTCGGACCACAAGCGGGAAACAGAGAGAGTGGTCCGTGAAGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062658.15 ENSMUST00000110633.8 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000222475.2 |
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| CDS GCA 72 bp | GGCAATCTGCTTCTGATTTCTGATAATTTCAATGGCTaGCCAAAGATGCTGGATAGCTTTTGTATCCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GNLLLISDNFNG*PKMLDSFCIRL Trigger: CAGGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000157035.9 ENSMUST00000220996.2 ENSMUST00000222358.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
||
| CDS TCA 72 bp | GCCTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AFVIRSMLAICF*FLIISMAAQRC Trigger: GCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157035.9 |
||
| CDS TCA 72 bp | GTCTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: VFVIRSMLAICF*FLIISMAAQRC Trigger: GCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222358.2 |
||
| CDS TCA 72 bp | TACTTTGTAATACGATCAATGTTGGCAATCTGCTTCTaGTTTCTGATAATTTCAATGGCTGCCCAAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: YFVIRSMLAICF*FLIISMAAQRC Trigger: GCATCTTTGGGCAGCCATTGAAATTATCAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENSMUST00000062658.15 ENSMUST00000110634.8 ENSMUST00000110635.8 ENSMUST00000110636.9 ENSMUST00000110637.8 ENSMUST00000110638.8 ENSMUST00000128658.8 ENSMUST00000130151.8 ENSMUST00000140180.2 ENSMUST00000144642.2 ENSMUST00000152725.8 ENSMUST00000154994.8 ENSMUST00000220996.2 ENSMUST00000222475.2 ENSMUST00000223421.2 |
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