Pregenerated sensors for ZMYM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040123Ensembl transcript IDs: ENSMUST00000039812.16, ENSMUST00000111285.9, ENSMUST00000173954.3, ENSMUST00000225699.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTaGCTCTGCCTCTTGAGTGCTGGGATTAAAGGCGTGCGCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWARTQKST*LCLLSAGIKGVRHK Trigger: CTTGTGGCGCACGCCTTTAATCCCAGCACTCAAGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR TCA 90 bp | CCCAAAGAGTCTGCAATACAGGCAAAACACAGAGTCTTTCGAGGCTaGGTAGAGCAGCCAGGGTCTGGTGCCCTTTTCACCATTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PKESAIQAKHRVFRG*VEQPGSGALFTIWK Trigger: CTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACTCTGTGTTTTGCCTGTATTGCAGACTCTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR GCA 90 bp | TCAAGACAGGGTTTGTGTATACCTTGGCTCTCCTGGAACTTGCTCTaGAGACCAGGCTGGCCTAGAGCTCACAGATATCCAACTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: SRQGLCIPWLSWNLL*RPGWPRAHRYPTLC Trigger: ACAGAGAGTTGGATATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR TCA 90 bp | AGAAACAAGACTGACAAGCGCCACAGTTCTATGCAAGGTAACAGGTaGCTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGA | + |
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Preference number: 1 (lower is better) Translates to: RNKTDKRHSSMQGNR*LCLCVGTSLPCLHG Trigger: TCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCACCTGTTACCTTGCATAGAACTGTGGCGCTTGTCAGTCTTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR GCA 90 bp | GTTTTTCAAGACAGGGTTTGTGTATACCTTGGCTCTCCTGGAACTTaGTCTGCAGACCAGGCTGGCCTAGAGCTCACAGATATCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: VFQDRVCVYLGSPGT*SADQAGLELTDIQL Trigger: GAGTTGGATATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CCA 90 bp | CTTTTTGGTTTTTCAAGACAGGGTTTGTGTATACCTTGGCTCTCCTaGAACTTGCTCTGCAGACCAGGCTGGCCTAGAGCTCACAGATAT | + |
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Preference number: 1 (lower is better) Translates to: LFGFSRQGLCIPWLS*NLLCRPGWPRAHRY Trigger: ATATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAAACCAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CCA 90 bp | GGCAAAACACAGAGTCTTTCGAGGCTGAGTAGAGCAGCCAGGGTCTaGTGCCCTTTTCACCATTTGGAAGAATTCGGGTATAATACGTTT | + |
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Preference number: 1 (lower is better) Translates to: GKTQSLSRLSRAARV*CPFHHLEEFGYNTF Trigger: AAACGTATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACTCTGTGTTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR GCA 90 bp | AAAACACAGAGTCTTTCGAGGCTGAGTAGAGCAGCCAGGGTCTGGTaGCCTTTTCACCATTTGGAAGAATTCGGGTATAATACGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: KTQSLSRLSRAARVW*PFHHLEEFGYNTFL Trigger: CAGAAACGTATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACTCTGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR GCA 90 bp | CCGCCACCATGTGGCCTGAATGCATTTTCTTTAGCTTGTTACATATaGATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PPPCGLNAFSLACYI*ILPPLALRPLSASS Trigger: AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACAAGCTAAAGAAAATGCATTCAGGCCACATGGTGGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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| 3UTR GCA 90 bp | CACAATTCTGGCAGCAGAATCTCTTTTGCTGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGGGCATATACTTGCTACACTGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: HNSGSRISFADLLSE*CAQYSWAYTCYTVH Trigger: GTGAACAGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACAGCATTCTGATAACAGGTCAGCAAAAGAGATTCTGCTGCCAGAATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR TCA 90 bp | ACAATAAGTATGTGGATAGTGGAGAGGATCACTCCAACAGCAGAATaGTGCTATTTCCACACCGATGTTCTCAGCACACCACCAAATCAA | + |
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Preference number: 1 (lower is better) Translates to: TISMWIVERITPTAE*CYFHTDVLSTPPNQ Trigger: TTGATTTGGTGGTGTGCTGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCACTATCCACATACTTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR TCA 90 bp | ATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATaGTTAAAAGCAACTTTCTTTTGGAGACAGGGATTCATAAACCCA | + |
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Preference number: 1 (lower is better) Translates to: ITVDSHHDSLRSKPK*LKATFFWRQGFINP Trigger: TGGGTTTATGAATCCCTGTCTCCAAAAGAAAGTTGCTTTTAATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGAGTGCTTGGAGGCCCAGGGAGCTGTAGTAGTGGTCATGGCCGTGGTGCTCCCTGCCCCTGCCTCCTaGGTGCCATCATTCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LECLEAQGAVVVVMAVVLPAPAS*VPSFSV Trigger: AACTGAGAATGATGGCACTCAGGAGGCAGGGGCAGG...GAGCACCACGGCCATGACCACTACTACAGCTCCCTGGGCCTCCAAGCACTCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CTCGAGTGCTTGGAGGCCCAGGGAGCTGTAGTAGTGGTCATGGCCGTGGTGCTCAGTCAGGGGTTGCCCTaGCACCCTTGGCAATTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LECLEAQGAVVVVMAVVLSQGLP*HPWQLC Trigger: ACACAATTGCCAAGGGTGGCAGGGCAACCCCTGACT...GAGCACCACGGCCATGACCACTACTACAGCTCCCTGGGCCTCCAAGCACTCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCATTCAGAGATCCACCTaGCCCTGCCTCCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: THSVDQAGLELRNPPASAIQRST*PCLLSA Trigger: GGCACTCAGGAGGCAGGGGCAGGTGGATCTCTGAAT...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAATTCAGAGATCCACCTaGCCCTGCCTCCTGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTIQRST*PCLLSA Trigger: GGCACTCAGGAGGCAGGGGCAGGTGGATCTCTGAAT...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CTCGAGTGCTTGGAGGCCCAGGGAGCTGTAGTAGTGGTCATGGCCGTGGTGCTCCACTTGTATTGTGCCTaGTCCTGTGCCCAAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LECLEAQGAVVVVMAVVLHLYCA*SCAQEA Trigger: AGCTTCTTGGGCACAGGAGCAGGCACAATACAAGTG...GAGCACCACGGCCATGACCACTACTACAGCTCCCTGGGCCTCCAAGCACTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CAA 90 bp | GTAGCCCCAGTTGTCCTGAAACTTGCTCTGCACACCAGGCTGGCTTaGAATTCAGAGATCCACCTGCCCCTGCCTCCTGAGTGCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: VAPVVLKLALHTRLA*NSEIHLPLPPECHH Trigger: ATGATGGCACTCAGGAGGCAGGGGCAGGTGGATCTCTGAATTCAAAGCCAGCCTGGTGTGCAGAGCAAGTTTCAGGACAACTGGGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACATTGTGCCTGCTCCTGTaGCCAAGAAGCTATTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTLCLLL*PRSYCW Trigger: CCAGCAATAGCTTCTTGGGCACAGGAGCAGGCACAA...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTACCTGCCCCTGCCTCCTaGGTGCCATCATTCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: VTVPLCWYISSLSPRTLVPAPAS*VPSFSV Trigger: AACTGAGAATGATGGCACTCAGGAGGCAGGGGCAGG...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCCCCCTGCCTCCTGAGTaGCATCATTCTCAGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: THSVDQAGLELRNPPASAPLPPE*HHSQFH Trigger: ATGAAACTGAGAATGATGGCACTCAGGAGGCAGGGG...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAGGGTGGCTTCACACTTaGTGTTTGTGTCTACCACTA | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTGWLHT*CLCLPL Trigger: TAGTGGTAGACACAAACAGCAAGTGTGAAGCCACCC...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCGTGTGGAGAGGCTACTaGAGAAACAAGACTGACAAG | + |
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Preference number: 2 (lower is better) Translates to: THSVDQAGLELRNPPASAVWRGY*RNKTDK Trigger: CTTGTCAGTCTTGTTTCTCCAGTAGCCTCTCCACAC...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGAGTGCTTGGAGGCCCAGGGAGCTGTAGTAGTGGTCATGGCCGTGGTGCTCTTTTCAGGAATTCAGTaGCAAACTTGTGAAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: LECLEAQGAVVVVMAVVLFSGIQ*QTCENP Trigger: TGGGTTTTCACAAGTTTGTCACTGAATTCCTGAAAA...GAGCACCACGGCCATGACCACTACTACAGCTCCCTGGGCCTCCAAGCACTCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAGTTACATATGCATCTTaGCACCTCTTGCTCTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTVTYAS*HLLLLG Trigger: GCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAAC...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCAGGCTCTCCTGGAACTTaGTCTGCAGACCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WRGSLQQQNDAISTPMFSGSPGT*SADQAG Trigger: GCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCC...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACACTGCCACATGGCCAATaGAGATCAAACCCAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTLPHGQ*RSNPVY Trigger: ATAAACTGGGTTTGATCTGCATTGGCCATGTGGCAG...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAGCCTTTGCTAAAGTCTaGAAGAATGACTACACTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTAFAKV*KNDYTL Trigger: GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGC...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CAA 90 bp | GGTTTTTCAAGACAGGGTTTGTGTATACCTTGGCTCTCCTGGAACTaGCTCTGCAGACCAGGCTGGCCTAGAGCTCACAGATATCCAACT | + |
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Preference number: 2 (lower is better) Translates to: GFSRQGLCIPWLSWN*LCRPGWPRAHRYPT Trigger: AGTTGGATATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTGGCTCTCCTGGAACTTaGTCTGCAGACCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: CYICILPPLALRPLSASSGSPGT*SADQAG Trigger: GCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCC...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACGGCTCTCCTGGAACTTaGTCTGCAGACCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYGSPGT*SADQAG Trigger: GCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCC...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCTTTTCAGGAATTCAGTaGCAAACTTGTGAAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: THSVDQAGLELRNPPASAFSGIQ*QTCENP Trigger: TGGGTTTTCACAAGTTTGTCACTGAATTCCTGAAAA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTAGTTACATATGCATCTTaGCACCTCTTGCTCTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: VTVPLCWYISSLSPRTLVVTYAS*HLLLLG Trigger: GCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAAC...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCAAGTTGTCCTGAAACTTaGTCTGCACACCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WRGSLQQQNDAISTPMFSSCPET*SAHQAG Trigger: GCCAGCCTGGTGTGCAGAGCAAGTTTCAGGACAACT...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CAA 90 bp | TCGAGGCTGAGTAGAGCAGCCAGGGTCTGGTGCCCTTTTCACCATTaGGAAGAATTCGGGTATAATACGTTTCTGAAAACTTCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRLSRAARVWCPFHH*EEFGYNTFLKTSCL Trigger: CAGGCAAGAAGTTTTCAGAAACGTATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACACCTGCCCCTGCCTCCTaGGTGCCATCATTCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: RPLSASSPTTFYKVETLTPAPAS*VPSFSV Trigger: AACTGAGAATGATGGCACTCAGGAGGCAGGGGCAGG...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAAGATCCACCTGCCCCTaGCTCCTGAGTGCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: FQLKVVYTILIPRRQNTTRSTCP*LLSAII Trigger: AATGATGGCACTCAGGAGGCAGGGGCAGGTGGATCT...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCACACTTGTATTGTGCCTaGTCCTGTGCCCAAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: WRGSLQQQNDAISTPMFSHLYCA*SCAQEA Trigger: AGCTTCTTGGGCACAGGAGCAGGCACAATACAAGTG...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTATCCCTGGAAGAGACCTaGCTGTTTGTTCTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLSLEET*LFVLPA Trigger: GGCAGGGAGAACAAACAGGCAGGTCTCTTCCAGGGA...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCTTAATGACACTGTTTTaGAAGAAAAGCCCTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: THSVDQAGLELRNPPASALMTLF*KKSPKE Trigger: CTCTTTAGGGCTTTTCTTGCAAAACAGTGTCATTAA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: MSSCKVLLHSVCLGTADTDLLSE*CAQYSW Trigger: CCAAGAGTACTGGGCACAGCATTCTGATAACAGGTC...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTTACACAGTGTATGTCTaGGTACTGCAGACACTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MSSCKVLLHSVCLGTADTYTVYV*VLQTLP Trigger: TGGCAGTGTCTGCAGTACCCAGACATACACTGTGTA...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAAAAGCAACTTTCTTTTaGAGACAGGGATTCATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTKATFF*RQGFIN Trigger: GTTTATGAATCCCTGTCTCCAAAAGAAAGTTGCTTT...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTACACCAGGCTGGCTTTaGATTCAGAGATCCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CYICILPPLALRPLSASSTPGWL*IQRSTC Trigger: GCAGGTGGATCTCTGAATTCAAAGCCAGCCTGGTGT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGTCCTGGAACTTGCTCTaGAGACCAGGCTGGCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PLSASSPTTFYKVETLTVSWNLL*RPGWPR Trigger: TCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGA...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACATTGTGCCTGCTCCTGTaGCCAAGAAGCTATTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FQLKVVYTILIPRRQNTTLCLLL*PRSYCW Trigger: CCAGCAATAGCTTCTTGGGCACAGGAGCAGGCACAA...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCACCTGTTTGTTCTCCCTaGCCATTAGGAAGTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: WRGSLQQQNDAISTPMFSPVCSP*PLGSLK Trigger: CTTCAGACTTCCTAATGGGCAGGGAGAACAAACAGG...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR TCA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGACACCAGGCTGGCTTTaGATTCAGAGATCCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PLSASSPTTFYKVETLTVTPGWL*IQRSTC Trigger: GCAGGTGGATCTCTGAATTCAAAGCCAGCCTGGTGT...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTTCCTGGAACTTGCTCTaGAGACCAGGCTGGCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFSWNLL*RPGWPR Trigger: TCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGA...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTACCCCTGCCTCCTGAGTaGCATCATTCTCAGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLPLPPE*HHSQFH Trigger: ATGAAACTGAGAATGATGGCACTCAGGAGGCAGGGG...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTATACCTTGGCTCTCCTaGAACTTGCTCTGCAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: CYICILPPLALRPLSASSIPWLS*NLLCRP Trigger: TGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTAT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTGGTTTGTGTATACCTTaGCTCTCCTGGAACTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QTCENPQENLHPEDPSSSGLCIP*LSWNLL Trigger: GAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACC...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATGGTTTGTGTATACCTTaGCTCTCCTGGAACTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LRLQLTATMTHLDPSPNDGLCIP*LSWNLL Trigger: GAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACC...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGCCCCTGCCTCCTGAGTaGCATCATTCTCAGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PLSASSPTTFYKVETLTVPLPPE*HHSQFH Trigger: ATGAAACTGAGAATGATGGCACTCAGGAGGCAGGGG...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTTACACAGTGTATGTCTaGGTACTGCAGACACTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CYICILPPLALRPLSASSYTVYV*VLQTLP Trigger: TGGCAGTGTCTGCAGTACCCAGACATACACTGTGTA...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAATACCTTGGCTCTCCTaGAACTTGCTCTGCAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: RPLSASSPTTFYKVETLTIPWLS*NLLCRP Trigger: TGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTAT...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACGGTTTGTGTATACCTTaGCTCTCCTGGAACTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYGLCIP*LSWNLL Trigger: GAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACC...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR CAA 90 bp | CCATGTGGCCTGAATGCATTTTCTTTAGCTTGTTACATATGCATCTaGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: PCGLNAFSLACYICI*PPLALRPLSASSPT Trigger: TGTTGGAGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACAAGCTAAAGAAAATGCATTCAGGCCACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAACGTCAAATGACCAATaGAGCTGGTATAGCTCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLTSNDQ*SWYSSS Trigger: ACTCGAGCTATACCAGCTTCATTGGTCATTTGACGT...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATGCCTTTGCTAAAGTCTaGAAGAATGACTACACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LRLQLTATMTHLDPSPNDAFAKV*KNDYTL Trigger: GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGC...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTCCCCAAAGAGTCTGCAATACAGGCAAAACACAGAGTCTTTCGAGGCTGACCATGTGGCCTGAATaGATTTTCTTTAGCTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: FLPQRVCNTGKTQSLSRLTMWPE*IFFSLL Trigger: TAACAAGCTAAAGAAAATGCATTCAGGCCACATGGT...CAGCCTCGAAAGACTCTGTGTTTTGCCTGTATTGCAGACTCTTTGGGGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATACACAGTGTATGTCTaGGTACTGCAGACACTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RPLSASSPTTFYKVETLTYTVYV*VLQTLP Trigger: TGGCAGTGTCTGCAGTACCCAGACATACACTGTGTA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCAGATCAGGACCATAGATaGCCATCAGAAAATTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: WRGSLQQQNDAISTPMFSDQDHR*PSENLL Trigger: AAGCAAATTTTCTGATGGCCATCTATGGTCCTGATC...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR CAA 90 bp | CCCAGGAGACAGAACACCACAATTGGATCAGATTTTCTACCACCTTaGTCTGAATGCCAGTCAGAAACCGAGTATATCAAGCTATATACT | + |
|
Preference number: 2 (lower is better) Translates to: PRRQNTTIGSDFLPP*SECQSETEYIKLYT Trigger: AGTATATAGCTTGATATACTCGGTTTCTGACTGGCATTCAGACAAAGGTGGTAGAAAATCTGATCCAATTGTGGTGTTCTGTCTCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAGCCTTTGCTAAAGTCTaGAAGAATGACTACACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: FQLKVVYTILIPRRQNTTAFAKV*KNDYTL Trigger: GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGC...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTGGTTTGTGTATACCTTaGCTCTCCTGGAACTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFGLCIP*LSWNLL Trigger: GAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACC...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACTCAGTGACAAACTTGTaGAAACCCACAAGAGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYSVTNL*KPTRES Trigger: AGATTCTCTTGTGGGTTTTCACAAGTTTGTCACTGA...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACATTTTCAGGAATTCAGTaGCAAACTTGTGAAAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: FQLKVVYTILIPRRQNTTFSGIQ*QTCENP Trigger: TGGGTTTTCACAAGTTTGTCACTGAATTCCTGAAAA...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTGAGGTGGATTGTTTTTaGCAAGAAATTCACGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CYICILPPLALRPLSASSEVDCF*QEIHVV Trigger: AACAACGTGAATTTCTTGTCAAAAACAATCCACCTC...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACACCAAACTACATCCTCTaGCTGGAAAGGTATAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: FQLKVVYTILIPRRQNTTPNYIL*LERYNL Trigger: TAAATTATACCTTTCCAGGCAGAGGATGTAGTTTGG...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTTCTTGGGCATATACTTaGTACACTGTTCACAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFSWAYT*YTVHSS Trigger: ACTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGA...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
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| 3UTR CAA 90 bp | TTTTACAAGGTGGAAACCCTAACAGTGACAAAGCTCAAACTGCCTTaGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FYKVETLTVTKLKLP*LKSARMTTLSKIAF Trigger: AAAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGGGTTTCCACCTTGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAACCATGTGGCCTGAATaGATTTTCTTTAGCTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: RPLSASSPTTFYKVETLTTMWPE*IFFSLL Trigger: TAACAAGCTAAAGAAAATGCATTCAGGCCACATGGT...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTACCATGTGGCCTGAATaGATTTTCTTTAGCTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFTMWPE*IFFSLL Trigger: TAACAAGCTAAAGAAAATGCATTCAGGCCACATGGT...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTCCAAAGAAGGTAAAATaGACATATCCAATTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFPKKVK*TYPIPL Trigger: CAGAGGAATTGGATATGTCCATTTTACCTTCTTTGG...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTACACTATTGTTGATGTaGATTTCACTTTCGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: QTAFAKVCKNDYTLENCFTLLLM*ISLSSC Trigger: ACATGACGAAAGTGAAATGCACATCAACAATAGTGT...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR GCA 72 bp | CCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTaGCTCTTGAGTGCTGGGATTAAAGGCGTGCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWARTQKSTCL*LLSAGIKGVRH Trigger: GTGGCGCACGCCTTTAATCCCAGCACTCAAGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTaGCTCTGCCTCTTGAGTGCTGGGATTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWARTQKST*LCLLSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCAAGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CCA 72 bp | CCTTGGCTCTCCTGGAACTTGCTCTGCAGACCAGGCTaGCCTAGAGCTCACAGATATCCAACTCTCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PWLSWNLLCRPG*PRAHRYPTLCV Trigger: GACACAGAGAGTTGGATATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTAGTGCCCAAGAAGCTATaGCTGGTGGCCAGCCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VTVPLCWYISSLSPRTLVVPKKL*LVASQY Trigger: GTACTGGCTGGCCACCAGCAATAGCTTCTTGGGCAC...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | GACAGGGTTTGTGTATACCTTGGCTCTCCTGGAACTTaGTCTGCAGACCAGGCTGGCCTAGAGCTCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DRVCVYLGSPGT*SADQAGLELTD Trigger: ATCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR TCA 72 bp | TCTGCAATACAGGCAAAACACAGAGTCTTTCGAGGCTaGGTAGAGCAGCCAGGGTCTGGTGCCCTTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SAIQAKHRVFRG*VEQPGSGALFT Trigger: GGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACTCTGTGTTTTGCCTGTATTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR GCA 72 bp | TGGCTTCACACTTGCTGTTTGTGTCTACCACTAGAGTaGTATGGTGATAGGCCTGCTGCCACATGGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: WLHTCCLCLPLE*YGDRPAATWPM Trigger: CATTGGCCATGTGGCAGCAGGCCTATCACCATAGCACTCTAGTGGTAGACACAAACAGCAAGTGTGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CCA 72 bp | TTTTCAAGACAGGGTTTGTGTATACCTTGGCTCTCCTaGAACTTGCTCTGCAGACCAGGCTGGCCTAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FSRQGLCIPWLS*NLLCRPGWPRA Trigger: AGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CCA 72 bp | TTGTGCCTGCTCCTGTGCCCAAGAAGCTATTGCTGGTaGCCAGCCAGTACTGATTACTGTTACCATCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCLLLCPRSYCW*PASTDYCYHQS Trigger: TGACTGATGGTAACAGTAATCAGTACTGGCTGGCCACCAGCAATAGCTTCTTGGGCACAGGAGCAGGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CCA 72 bp | GTATTGTGCCTGCTCCTGTGCCCAAGAAGCTATTGCTaGTGGCCAGCCAGTACTGATTACTGTTACCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLCLLLCPRSYC*WPASTDYCYHQ Trigger: CTGATGGTAACAGTAATCAGTACTGGCTGGCCACCAGCAATAGCTTCTTGGGCACAGGAGCAGGCACAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CCA 72 bp | CAGAGTCTTTCGAGGCTGAGTAGAGCAGCCAGGGTCTaGTGCCCTTTTCACCATTTGGAAGAATTCGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QSLSRLSRAARV*CPFHHLEEFGY Trigger: ATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATCCACGGACACTTGTATaGTGCCTGCTCCTGTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRLQLTATMTHLDPSPNDPRTLV*CLLLCP Trigger: TGGGCACAGGAGCAGGCACAATACAAGTGTCCGTGG...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR TCA 72 bp | ACTGACAAGCGCCACAGTTCTATGCAAGGTAACAGGTaGCTGTGCCTCTGTGTTGGTACATCTCTTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TDKRHSSMQGNR*LCLCVGTSLPC Trigger: ACAGGGAAGAGATGTACCAACACAGAGGCACAGTCACCTGTTACCTTGCATAGAACTGTGGCGCTTGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | CTTGTATTGTGCCTGCTCCTGTGCCCAAGAAGCTATTaGTGGTGGCCAGCCAGTACTGATTACTGTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLCLLLCPRSY*WWPASTDYCYH Trigger: ATGGTAACAGTAATCAGTACTGGCTGGCCACCAGCAATAGCTTCTTGGGCACAGGAGCAGGCACAATACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAGTGCCCAAGAAGCTATaGCTGGTGGCCAGCCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLVPKKL*LVASQY Trigger: GTACTGGCTGGCCACCAGCAATAGCTTCTTGGGCAC...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | AGTCTTTCGAGGCTGAGTAGAGCAGCCAGGGTCTGGTaGCCTTTTCACCATTTGGAAGAATTCGGGTATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSRLSRAARVW*PFHHLEEFGYN Trigger: ATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACTCAGCCTCGAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCAGGGTTTGTGTATACCTaGGCTCTCCTGGAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WRGSLQQQNDAISTPMFSGFVYT*ALLELA Trigger: AGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCC...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTGGGTTTGTGTATACCTaGGCTCTCCTGGAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTCENPQENLHPEDPSSSGFVYT*ALLELA Trigger: AGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCC...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR TCA 72 bp | ATGTGGATAGTGGAGAGGATCACTCCAACAGCAGAATaGTGCTATTTCCACACCGATGTTCTCAGCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: MWIVERITPTAE*CYFHTDVLSTP Trigger: TGGTGTGCTGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCACTATCCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | GGCAGCAGAATCTCTTTTGCTGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGGGCATATACTTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSRISFADLLSE*CAQYSWAYTCY Trigger: GTAGCAAGTATATGCCCAAGAGTACTGGGCACAGCATTCTGATAACAGGTCAGCAAAAGAGATTCTGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR CCA 72 bp | GCTGACCTGTTATCAGAATGCTGTGCCCAGTACTCTTaGGCATATACTTGCTACACTGTTCACAGCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ADLLSECCAQYS*AYTCYTVHSSS Trigger: TGAACTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACAGCATTCTGATAACAGGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAGGGTTTGTGTATACCTaGGCTCTCCTGGAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLGFVYT*ALLELA Trigger: AGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCC...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGGGTTTGTGTATACCTaGGCTCTCCTGGAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLGFVYT*ALLELA Trigger: AGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCC...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCATTTTCAAGACAGGGTTaGTGTATACCTTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WRGSLQQQNDAISTPMFSFSRQG*CIPWLS Trigger: GGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAA...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAAGGGTGGCTTCACACTaGCTGTTTGTGTCTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: FQLKVVYTILIPRRQNTTRVASH*LFVSTT Trigger: AGTGGTAGACACAAACAGCAAGTGTGAAGCCACCCT...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAAGGGTGGCTTCACACTaGCTGTTTGTGTCTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLRVASH*LFVSTT Trigger: AGTGGTAGACACAAACAGCAAGTGTGAAGCCACCCT...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR TCA 72 bp | ATTTGCTTCTTCTTTAGGAAAACGTCAAATGACCAATaGAGCTGGTATAGCTCGAGTGCTTGGAGGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ICFFFRKTSNDQ*SWYSSSAWRPR Trigger: CCTGGGCCTCCAAGCACTCGAGCTATACCAGCTTCATTGGTCATTTGACGTTTTCCTAAAGAAGAAGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | TTGAATTCAGAGATCCACCTGCCCCTGCCTCCTGAGTaGCATCATTCTCAGTTTCATATAAGTAAGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSEIHLPLPPE*HHSQFHISKGF Trigger: AAAGCCCTTACTTATATGAAACTGAGAATGATGGCACTCAGGAGGCAGGGGCAGGTGGATCTCTGAATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAATGGTCACATTGGTCTaGGTGTTAGGTGCTCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FQLKVVYTILIPRRQNTTMVTLV*VLGALR Trigger: CCTTAGAGCACCTAACACCAAGACCAATGTGACCAT...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAATGGTCACATTGGTCTaGGTGTTAGGTGCTCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLMVTLV*VLGALR Trigger: CCTTAGAGCACCTAACACCAAGACCAATGTGACCAT...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTACTTCACACTTGCTGTTaGTGTCTACCACTAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLLHTCC*CLPLEC Trigger: GCACTCTAGTGGTAGACACAAACAGCAAGTGTGAAG...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR GCA 72 bp | AGATTAAAGGTGCACACCGCCACCATGTGGCCTGAATaGATTTTCTTTAGCTTGTTACATATGCATCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLKVHTATMWPE*IFFSLLHMHLA Trigger: GGCAAGATGCATATGTAACAAGCTAAAGAAAATGCATTCAGGCCACATGGTGGCGGTGTGCACCTTTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACATTTTCAAGACAGGGTTaGTGTATACCTTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FQLKVVYTILIPRRQNTTFSRQG*CIPWLS Trigger: GGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAA...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR TCA 72 bp | GACAGCCACCATGACTCACTTAGATCCAAGCCCAAATaGTTAAAAGCAACTTTCTTTTGGAGACAGGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: DSHHDSLRSKPK*LKATFFWRQGF Trigger: GAATCCCTGTCTCCAAAAGAAAGTTGCTTTTAATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATTTGCTGTTAGACATATaGCTAATGAGCTCCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLQLTATMTHLDPSPNDLLLDI*LMSSCK Trigger: CTTACAGGAGCTCATTAGCAATATGTCTAACAGCAA...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTTTGCTGTTAGACATATaGCTAATGAGCTCCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QTCENPQENLHPEDPSSSLLLDI*LMSSCK Trigger: CTTACAGGAGCTCATTAGCAATATGTCTAACAGCAA...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCATGCATTTTCTTTAGCTaGTTACATATGCATCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: WRGSLQQQNDAISTPMFSCIFFS*LHMHLA Trigger: GGCAAGATGCATATGTAACAAGCTAAAGAAAATGCA...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATTTTCAAGACAGGGTTaGTGTATACCTTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPLSASSPTTFYKVETLTFSRQG*CIPWLS Trigger: GGAGAGCCAAGGTATACACAAACCCTGTCTTGAAAA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACTTGCTGTTAGACATATaGCTAATGAGCTCCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYLLLDI*LMSSCK Trigger: CTTACAGGAGCTCATTAGCAATATGTCTAACAGCAA...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGAAGCTCAAACTGCCTTaGCTAAAGTCTGCAAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: PLSASSPTTFYKVETLTVKLKLP*LKSARM Trigger: CATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTT...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATTGCTGTTAGACATATaGCTAATGAGCTCCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPLSASSPTTFYKVETLTLLLDI*LMSSCK Trigger: CTTACAGGAGCTCATTAGCAATATGTCTAACAGCAA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTTGCATTTTCTTTAGCTaGTTACATATGCATCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CYICILPPLALRPLSASSCIFFS*LHMHLA Trigger: GGCAAGATGCATATGTAACAAGCTAAAGAAAATGCA...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTTTCTGAAAACTTCTaGCCTGCACTATCTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPLSASSPTTFYKVETLTVSENF*PALSFG Trigger: TCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAAC...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR TCA 72 bp | CACCACAATTGGATCAGATTTTCTACCACCTTTGTCTaGATGCCAGTCAGAAACCGAGTATATCAAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: HHNWIRFSTTFV*MPVRNRVYQAI Trigger: TATAGCTTGATATACTCGGTTTCTGACTGGCATTCAGACAAAGGTGGTAGAAAATCTGATCCAATTGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR-3UTR CAA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGTGCATTTTCTTTAGCTaGTTACATATGCATCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLSASSPTTFYKVETLTVCIFFS*LHMHLA Trigger: GGCAAGATGCATATGTAACAAGCTAAAGAAAATGCA...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| 3UTR TCA 72 bp | GTGCATTTCACTTTCGTCATGTTTACTAAGAAGATGTaGCAAATGATGCCAATCTTTGCACCCATTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: VHFTFVMFTKKM*QMMPIFAPILI Trigger: AATGAGAATGGGTGCAAAGATTGGCATCATTTGTCACATCTTCTTAGTAAACATGACGAAAGTGAAATGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR GCA 72 bp | ACAATTGGATCAGATTTTCTACCACCTTTGTCTGAATaGCAGTCAGAAACCGAGTATATCAAGCTATATACT | + |
|
Preference number: 3 (lower is better) Translates to: TIGSDFLPPLSE*QSETEYIKLYT Trigger: AGTATATAGCTTGATATACTCGGTTTCTGACTGGCATTCAGACAAAGGTGGTAGAAAATCTGATCCAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | CTCGAGTGCTTGGAGGCCCAGGGAGCTGTAGTAGTGGTCATGGCCGTGGTGCTCTGTTGGTTCGAGGGCTaGAATATCTGTTTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LECLEAQGAVVVVMAVVLCWFEG*NICLGS Trigger: ACTTCCTAAACAGATATTCCAGCCCTCGAACCAACA...GAGCACCACGGCCATGACCACTACTACAGCTCCCTGGGCCTCCAAGCACTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CAA 72 bp | AGACAGGGTTTGTGTATACCTTGGCTCTCCTGGAACTaGCTCTGCAGACCAGGCTGGCCTAGAGCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGLCIPWLSWN*LCRPGWPRAHR Trigger: TCTGTGAGCTCTAGGCCAGCCTGGTCTGCAGAGCAAGTTCCAGGAGAGCCAAGGTATACACAAACCCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR GCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACACTGCAGTCTTGGTCTTaGTTCTTGATAGACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTLQSWS*FLIDWQ Trigger: TTGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAG...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCTGCTTCTTGATAGACTaGCAATGGGGAAATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: THSVDQAGLELRNPPASACFLID*QWGNPH Trigger: ATGTGGATTTCCCCATTGCCAGTCTATCAAGAAGCA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACAACCCCTTGTTGTTTCTaGTTACGAGGAAATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTTPCCF*LRGNDA Trigger: AGCATCATTTCCTCGTAACCAGAAACAACAAGGGGT...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTACTGCAGTCTTGGTCTTaGTTCTTGATAGACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTVPLCWYISSLSPRTLVLQSWS*FLIDWQ Trigger: TTGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAG...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTATGTGCCCAGTACTCTTaGGCATATACTTGCTACACT | + |
|
Preference number: 4 (lower is better) Translates to: VTVPLCWYISSLSPRTLVCAQYS*AYTCYT Trigger: AGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACA...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | CCGCCCCCATCCCCCACCTCGTTACCTTCCCTAGTGCTGAGATTACAGTTGACACCAAAGAAGGTAAAATaGACATATCCAATTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPTSLPSLVLRLQLTPKKVK*TYPIPL Trigger: CAGAGGAATTGGATATGTCCATTTTACCTTCTTTGG...TGTCAACTGTAATCTCAGCACTAGGGAAGGTAACGAGGTGGGGGATGGGGGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | AGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTGCCGAGGTGGATTGTTTTTaGCAAGAAATTCACGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCKVLLHSVCLGTADTAEVDCF*QEIHVV Trigger: AACAACGTGAATTTCTTGTCAAAAACAATCCACCTC...GGCAGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTAAGAAGGGGAAATTGTaGAATCAGTTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKVLLHSVCLGTADTKKGKL*NQFLVD Trigger: ATCCACCAGGAACTGATTCCACAATTTCCCCTTCTT...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCCCCAAAGAGTCTGCAATACAGGCAAAACACAGAGTCTTTCGAGGCTGTGCTTCTTGATAGACTaGCAATGGGGAAATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLPQRVCNTGKTQSLSRLCFLID*QWGNPH Trigger: ATGTGGATTTCCCCATTGCCAGTCTATCAAGAAGCA...CAGCCTCGAAAGACTCTGTGTTTTGCCTGTATTGCAGACTCTTTGGGGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCATGTGCCCAGTACTCTTaGGCATATACTTGCTACACT | + |
|
Preference number: 4 (lower is better) Translates to: WRGSLQQQNDAISTPMFSCAQYS*AYTCYT Trigger: AGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACA...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTCATAGATTTCCCTTCTaGGAAGTCAAATCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKVLLHSVCLGTADTHRFPF*EVKSLQ Trigger: TTGGAGAGATTTGACTTCTCAGAAGGGAAATCTATG...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR GCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CYICILPPLALRPLSASSDLLSE*CAQYSW Trigger: CCAAGAGTACTGGGCACAGCATTCTGATAACAGGTC...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLKVVYTILIPRRQNTTDLLSE*CAQYSW Trigger: CCAAGAGTACTGGGCACAGCATTCTGATAACAGGTC...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGACCTGTTATCAGAATaGTGTGCCCAGTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLDLLSE*CAQYSW Trigger: CCAAGAGTACTGGGCACAGCATTCTGATAACAGGTC...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTATTTCTGAAAACTTCTTaGCTGCACTATCTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTVPLCWYISSLSPRTLVFLKTS*LHYLLE Trigger: TTCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAA...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | ATCAGAATGCTGTGCCCAGTACTCTTGGGCATATACTTGCTACACTGTTCACAGAAGAAGGGGAAATTGTaGAATCAGTTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRMLCPVLLGIYLLHCSQKKGKL*NQFLVD Trigger: ATCCACCAGGAACTGATTCCACAATTTCCCCTTCTT...CTGTGAACAGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACAGCATTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TGTTATCAGAATGCTGTGCCCAGTACTCTTGGGCATATACTTGCTACACTGTTCGTCCTACTGCAGTCTTaGTCTTGCTTCTTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CYQNAVPSTLGHILATLFVLLQS*SCFLID Trigger: GTCTATCAAGAAGCAAGACCAAGACTGCAGTAGGAC...GAACAGTGTAGCAAGTATATGCCCAAGAGTACTGGGCACAGCATTCTGATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCAACCCCTTGTTGTTTCTaGTTACGAGGAAATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WRGSLQQQNDAISTPMFSTPCCF*LRGNDA Trigger: AGCATCATTTCCTCGTAACCAGAAACAACAAGGGGT...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CAA 72 bp | ATATTCGTCAGCACAATTCTGGCAGCAGAATCTCTTTaGCTGACCTGTTATCAGAATGCTGTGCCCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IFVSTILAAESL*LTCYQNAVPST Trigger: AGTACTGGGCACAGCATTCTGATAACAGGTCAGCAAAAGAGATTCTGCTGCCAGAATTGTGCTGACGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| 3UTR CAA 72 bp | AGTAGAGCAGCCAGGGTCTGGTGCCCTTTTCACCATTaGGAAGAATTCGGGTATAATACGTTTCTGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRAARVWCPFHH*EEFGYNTFLKT Trigger: AGTTTTCAGAAACGTATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCACCAGACCCTGGCTGCTCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACACTGCAGTCTTGGTCTTaGTTCTTGATAGACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLKVVYTILIPRRQNTTLQSWS*FLIDWQ Trigger: TTGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAG...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATAAGAAGGGGAAATTGTaGAATCAGTTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQLTATMTHLDPSPNDKKGKL*NQFLVD Trigger: ATCCACCAGGAACTGATTCCACAATTTCCCCTTCTT...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTCCAAAGAAGGTAAAATaGACATATCCAATTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSSCKVLLHSVCLGTADTPKKVK*TYPIPL Trigger: CAGAGGAATTGGATATGTCCATTTTACCTTCTTTGG...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCTCTTGGGCATATACTTaGTACACTGTTCACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLSWAYT*YTVHSS Trigger: ACTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGA...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTAAGAAGGGGAAATTGTaGAATCAGTTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CYICILPPLALRPLSASSKKGKL*NQFLVD Trigger: ATCCACCAGGAACTGATTCCACAATTTCCCCTTCTT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTATGCTTCTTGATAGACTaGCAATGGGGAAATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLCFLID*QWGNPH Trigger: ATGTGGATTTCCCCATTGCCAGTCTATCAAGAAGCA...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTCCTACTGCAGTCTTaGTCTTGCTTCTTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTVLLQS*SCFLID Trigger: GTCTATCAAGAAGCAAGACCAAGACTGCAGTAGGAC...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAGTCCTACTGCAGTCTTaGTCTTGCTTCTTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLSASSPTTFYKVETLVLLQS*SCFLID Trigger: GTCTATCAAGAAGCAAGACCAAGACTGCAGTAGGAC...TAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGGTCCTACTGCAGTCTTaGTCTTGCTTCTTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSASSPTTFYKVETLTVVLLQS*SCFLID Trigger: GTCTATCAAGAAGCAAGACCAAGACTGCAGTAGGAC...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTACCCCTTGTTGTTTCTaGTTACGAGGAAATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYICILPPLALRPLSASSTPCCF*LRGNDA Trigger: AGCATCATTTCCTCGTAACCAGAAACAACAAGGGGT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTATGTTGGTTCGAGGGCTaGAATATCTGTTTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLCWFEG*NICLGS Trigger: ACTTCCTAAACAGATATTCCAGCCCTCGAACCAACA...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACATGTTGGTTCGAGGGCTaGAATATCTGTTTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLKVVYTILIPRRQNTTCWFEG*NICLGS Trigger: ACTTCCTAAACAGATATTCCAGCCCTCGAACCAACA...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CAA 72 bp | CAGAACACCACAATTGGATCAGATTTTCTACCACCTTaGTCTGAATGCCAGTCAGAAACCGAGTATATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTIGSDFLPP*SECQSETEYIK Trigger: CTTGATATACTCGGTTTCTGACTGGCATTCAGACAAAGGTGGTAGAAAATCTGATCCAATTGTGGTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCCATAGATTTCCCTTCTaGGAAGTCAAATCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLHRFPF*EVKSLQ Trigger: TTGGAGAGATTTGACTTCTCAGAAGGGAAATCTATG...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATCTTGGGCATATACTTaGTACACTGTTCACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTSWAYT*YTVHSS Trigger: ACTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAACCCCTTGTTGTTTCTaGTTACGAGGAAATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTTPCCF*LRGNDA Trigger: AGCATCATTTCCTCGTAACCAGAAACAACAAGGGGT...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CGGGTATGTCTCCTGTGTTTCCTGAAAGTGTACCTGATGATTCACGTAATCGTTACAAGTGACTTTAACTaGTTTAGTGGGTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVCLLCFLKVYLMIHVIVTSDFN*FSGLLV Trigger: AACCAACAACCCACTAAACCAGTTAAAGTCACTTGT...AACGATTACGTGAATCATCAGGTACACTTTCAGGAAACACAGGAGACATACCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTCCAAAGAAGGTAAAATaGACATATCCAATTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTCENPQENLHPEDPSSSPKKVK*TYPIPL Trigger: CAGAGGAATTGGATATGTCCATTTTACCTTCTTTGG...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATGCCCTTTTCACCATTTaGAAGAATTCGGGTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQLTATMTHLDPSPNDALFTI*KNSGII Trigger: TATTATACCCGAATTCTTCCAAATGGTGAAAAGGGC...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACACATAGATTTCCCTTCTaGGAAGTCAAATCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTHRFPF*EVKSLQ Trigger: TTGGAGAGATTTGACTTCTCAGAAGGGAAATCTATG...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGGTATAATACGTTTCTaGAAACTTCTTGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTGIIRF*KLLACT Trigger: AGTGCAGGCAAGAAGTTTTCAGAAACGTATTATACC...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGGGTATAATACGTTTCTaGAAACTTCTTGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSASSPTTFYKVETLTVGIIRF*KLLACT Trigger: AGTGCAGGCAAGAAGTTTTCAGAAACGTATTATACC...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATTGATAGACTGGCAATaGGGAAATCCACATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTLIDWQ*GNPHFW Trigger: CCAAAAATGTGGATTTCCCCATTGCCAGTCTATCAA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTTGCTTCTTGATAGACTaGCAATGGGGAAATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QTAFAKVCKNDYTLENCFCFLID*QWGNPH Trigger: ATGTGGATTTCCCCATTGCCAGTCTATCAAGAAGCA...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTTGTTGGTTCGAGGGCTaGAATATCTGTTTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTAFAKVCKNDYTLENCFCWFEG*NICLGS Trigger: ACTTCCTAAACAGATATTCCAGCCCTCGAACCAACA...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAACAAGTGACTTTAACTaGTTTAGTGGGTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLTSDFN*FSGLLV Trigger: AACCAACAACCCACTAAACCAGTTAAAGTCACTTGT...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTACAAGTGACTTTAACTaGTTTAGTGGGTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYICILPPLALRPLSASSTSDFN*FSGLLV Trigger: AACCAACAACCCACTAAACCAGTTAAAGTCACTTGT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAGCCCTTTTCACCATTTaGAAGAATTCGGGTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: FQLKVVYTILIPRRQNTTALFTI*KNSGII Trigger: TATTATACCCGAATTCTTCCAAATGGTGAAAAGGGC...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTAGCCCTTTTCACCATTTaGAAGAATTCGGGTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLALFTI*KNSGII Trigger: TATTATACCCGAATTCTTCCAAATGGTGAAAAGGGC...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CAA 72 bp | TGTTCTCCATGCAGAAGGAAGCATCTTCTTAGGCCATaGTTAATGACACTGTTTTGCAAGAAAAGCCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSPCRRKHLLRP*LMTLFCKKSPK Trigger: TTTAGGGCTTTTCTTGCAAAACAGTGTCATTAACAATGGCCTAAGAAGATGCTTCCTTCTGCATGGAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGAGGTGGATTGTTTTTaGCAAGAAATTCACGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTEVDCF*QEIHVV Trigger: AACAACGTGAATTTCTTGTCAAAAACAATCCACCTC...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR TCA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTGGTATAATACGTTTCTaGAAACTTCTTGCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QTAFAKVCKNDYTLENCFGIIRF*KLLACT Trigger: AGTGCAGGCAAGAAGTTTTCAGAAACGTATTATACC...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGAAAGTGTACCTGATGATTCACGTAATCGTTTTTCATTTTCTTCTCTGCTGCAGTCTTGGTCTTaGTTCTTGATAGACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPESVPDDSRNRFSFSSLLQSWS*FLIDWQ Trigger: TTGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAG...CAGAGAAGAAAATGAAAAACGATTACGTGAATCATCAGGTACACTTTCAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACAAGGATTGTGATGAACTaGAAATCTTCCATTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLKVVYTILIPRRQNTTRIVMN*KSSILK Trigger: TTTCAGAATGGAAGATTTGCAGTTCATCACAATCCT...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | GGCACCAGGTACACACATGGTACATTTAACATACATACAGGCAAAACACTCCTATTTCTGAAAACTTCTTaGCTGCACTATCTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRYTHGTFNIHTGKTLLFLKTS*LHYLLE Trigger: TTCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAA...TAGGAGTGTTTTGCCTGTATGTATGTTAAATGTACCATGTGTGTACCTGGTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCTTTCTGAAAACTTCTTaGCTGCACTATCTTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLFLKTS*LHYLLE Trigger: TTCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAA...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACACTATTGTTGATGTaGATTTCACTTTCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYTLLLM*ISLSSC Trigger: ACATGACGAAAGTGAAATGCACATCAACAATAGTGT...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR GCA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAACACTATTGTTGATGTaGATTTCACTTTCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSASSPTTFYKVETLTTLLLM*ISLSSC Trigger: ACATGACGAAAGTGAAATGCACATCAACAATAGTGT...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| 3UTR CAA 72 bp | GCAATAAAAGGACTTGGACCCAATTTTTATTTCCAGTaGAAAGTGGTATACACAATACTGATTCCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIKGLGPNFYFQ*KVVYTILIPRR Trigger: TCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAAATAAAAATTGGGTCCAAGTCCTTTTATTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCTCTCCTCCCCTCCATTaGTGTCTGTGTCCCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: THSVDQAGLELRNPPASASPPLH*CLCPLH Trigger: ATGAAGGGGACACAGACACAAATGGAGGGGAGGAGA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCACTGCAGTCTTGGTCTaGCTTCTTGATAGACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: THSVDQAGLELRNPPASATAVLV*LLDRLA Trigger: TGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAGT...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | ACTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCACCTGCCTCTGCCCTCTTGGGCATATACTaGCTACACTGTTCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: THSVDQAGLELRNPPASALLGIY*LHCSQQ Trigger: CTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGAG...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTGCCTTGCTGGAGCACAAATaGGAGGCTGTACTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCKVLLHSVCLGTADTALLEHK*EAVLIQ Trigger: TTGAATCAGTACAGCCTCCAATTTGTGCTCCAGCAA...GGCAGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTTCTTGGTCTTGCTTCTaGATAGACTGGCAATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKVLLHSVCLGTADTSWSCF*IDWQWG Trigger: TCCCCATTGCCAGTCTATCAAGAAGCAAGACCAAGA...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTTTGCTGGAGCACAAATaGGAGGCTGTACTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKVLLHSVCLGTADTLLEHK*EAVLIQ Trigger: TTGAATCAGTACAGCCTCCAATTTGTGCTCCAGCAA...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTAGAATCCACCCCTTGTaGTTTCTGGTTACGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKVLLHSVCLGTADTRIHPL*FLVTRK Trigger: TTTCCTCGTAACCAGAAACAACAAGGGGTGGATTCT...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTAGTTTCTGAAAACTTCTaGCCTGCACTATCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTVPLCWYISSLSPRTLVVSENF*PALSFG Trigger: TCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAAC...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTGTGCCTCTGTGTTGGTACATCTCTTCCCTGTCTCCACGGACACTTGTATGCCCTTTTCACCATTaGGAAGAATTCGGGTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VTVPLCWYISSLSPRTLVCPFHH*EEFGYN Trigger: ATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCA...TACAAGTGTCCGTGGAGACAGGGAAGAGATGTACCAACACAGAGGCACAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | CTGAGATTACAGTTGACAGCCACCATGACTCACTTAGATCCAAGCCCAAATGATTCTTGGTCTTGCTTCTaGATAGACTGGCAATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLQLTATMTHLDPSPNDSWSCF*IDWQWG Trigger: TCCCCATTGCCAGTCTATCAAGAAGCAAGACCAAGA...ATCATTTGGGCTTGGATCTAAGTGAGTCATGGTGGCTGTCAACTGTAATCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTACTGCAGTCTTGGTCTaGCTTCTTGATAGACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTCENPQENLHPEDPSSSTAVLV*LLDRLA Trigger: TGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAGT...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | CAAACTTGTGAAAACCCACAAGAGAATCTTCATCCAGAAGACCCAAGCTCCAGTCTCTTGGGCATATACTaGCTACACTGTTCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTCENPQENLHPEDPSSSLLGIY*LHCSQQ Trigger: CTGCTGTGAACAGTGTAGCAAGTATATGCCCAAGAG...ACTGGAGCTTGGGTCTTCTGGATGAAGATTCTCTTGTGGGTTTTCACAAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | GTCAGCACAATTCTGGCAGCAGAATCTCTTTTGCTGACCTGTTATCAGAATGCTTTGCTGGAGCACAAATaGGAGGCTGTACTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSTILAAESLLLTCYQNALLEHK*EAVLIQ Trigger: TTGAATCAGTACAGCCTCCAATTTGTGCTCCAGCAA...AGCATTCTGATAACAGGTCAGCAAAAGAGATTCTGCTGCCAGAATTGTGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | CCTAACAGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACTCTTGGTCTTGCTTCTaGATAGACTGGCAATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PNSDKAQTAFAKVCKNDYSWSCF*IDWQWG Trigger: TCCCCATTGCCAGTCTATCAAGAAGCAAGACCAAGA...GTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACTGTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTACTGCAGTCTTGGTCTaGCTTCTTGATAGACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CYICILPPLALRPLSASSTAVLV*LLDRLA Trigger: TGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAGT...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCCTGTAAGGTCCTCTTACACAGTGTATGTCTGGGTACTGCAGACACTGTTTCTGAAAACTTCTaGCCTGCACTATCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSSCKVLLHSVCLGTADTVSENF*PALSFG Trigger: TCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAAC...AGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGGAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | CTTAGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTATCTTGGTCTTGCTTCTaGATAGACTGGCAATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRPLSASSPTTFYKVETLSWSCF*IDWQWG Trigger: TCCCCATTGCCAGTCTATCAAGAAGCAAGACCAAGA...TAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGATCACTCCAACAGCAGAATGATGCTATTTCCACACCGATGTTCTCATGCCCTTTTCACCATTaGGAAGAATTCGGGTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: WRGSLQQQNDAISTPMFSCPFHH*EEFGYN Trigger: ATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCA...TGAGAACATCGGTGTGGAAATAGCATCATTCTGCTGTTGGAGTGATCCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACATTGCTGGAGCACAAATaGGAGGCTGTACTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RPLSASSPTTFYKVETLTLLEHK*EAVLIQ Trigger: TTGAATCAGTACAGCCTCCAATTTGTGCTCCAGCAA...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCGAAAATTGCTTTACTGCAGTCTTGGTCTaGCTTCTTGATAGACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTAFAKVCKNDYTLENCFTAVLV*LLDRLA Trigger: TGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAGT...AAAGCAATTTTCGAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAAGAATCCACCCCTTGTaGTTTCTGGTTACGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRPLSASSPTTFYKVETLRIHPL*FLVTRK Trigger: TTTCCTCGTAACCAGAAACAACAAGGGGTGGATTCT...TAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
||
| CDS-3UTR CAA 90 bp | TGTTACATATGCATCTTGCCACCTCTTGCTCTTAGGCCATTAAGTGCAAGTTCTTGCCCTTTTCACCATTaGGAAGAATTCGGGTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: CYICILPPLALRPLSASSCPFHH*EEFGYN Trigger: ATTATACCCGAATTCTTCCAAATGGTGAAAAGGGCA...AGAACTTGCACTTAATGGCCTAAGAGCAAGAGGTGGCAAGATGCATATGTAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
||
| CDS-3UTR CAA 90 bp | CCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACAGTGGTTTCTGAAAACTTCTaGCCTGCACTATCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSASSPTTFYKVETLTVVSENF*PALSFG Trigger: TCCAAAAGATAGTGCAGGCAAGAAGTTTTCAGAAAC...CACTGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| CDS-3UTR CAA 90 bp | TTCCAGTTGAAAGTGGTATACACAATACTGATTCCCAGGAGACAGAACACCACACCTTCTGTAGCTTCATaGGTTTTATTTTCCAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: FQLKVVYTILIPRRQNTTPSVAS*VLFSKS Trigger: TGACTTGGAAAATAAAACCAATGAAGCTACAGAAGG...TGTGGTGTTCTGTCTCCTGGGAATCAGTATTGTGTATACCACTTTCAACTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| CDS-3UTR CAA 90 bp | AGTGACAAAGCTCAAACTGCCTTTGCTAAAGTCTGCAAGAATGACTACACTCTCCCTTCTGTAGCTTCATaGGTTTTATTTTCCAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SDKAQTAFAKVCKNDYTLPSVAS*VLFSKS Trigger: TGACTTGGAAAATAAAACCAATGAAGCTACAGAAGG...GAGAGTGTAGTCATTCTTGCAGACTTTAGCAAAGGCAGTTTGAGCTTTGTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| CDS-3UTR CAA 90 bp | AGGCCATTAAGTGCAAGTTCTCCAACAACATTTTACAAGGTGGAAACCCTAACACCTTCTGTAGCTTCATaGGTTTTATTTTCCAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RPLSASSPTTFYKVETLTPSVAS*VLFSKS Trigger: TGACTTGGAAAATAAAACCAATGAAGCTACAGAAGG...TGTTAGGGTTTCCACCTTGTAAAATGTTGTTGGAGAACTTGCACTTAATGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 |
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| CDS CAA 72 bp | TCGATCCTACCGGGATTAAAAGGTCCTACTGCAGTCTaGGTCTTGCTTCTTGATAGACTGGCAATGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SILPGLKGPTAV*VLLLDRLAMGK Trigger: TTTCCCCATTGCCAGTCTATCAAGAAGCAAGACCAAGACTGCAGTAGGACCTTTTAATCCCGGTAGGATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039812.16 ENSMUST00000111285.9 ENSMUST00000173954.3 ENSMUST00000225699.2 |
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