RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031310

Ensembl transcript IDs: ENSMUST00000063577.10, ENSMUST00000117637.8, ENSMUST00000117901.8, ENSMUST00000118092.8, ENSMUST00000119699.8, ENSMUST00000120107.8, ENSMUST00000120201.8, ENSMUST00000121429.8, ENSMUST00000121520.8, ENSMUST00000134005.2

Found 1068 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAAAAAGAAGGCTGGGGAACAGCAAAGCCAACAGGGAAAGAACTaGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAG +
Preference number: 1 (lower is better)
Translates to: HKKKAGEQQSQQGKN*VLPLTDTNLSGPTK
Trigger: CTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTGTTGGCTTTGCTGTTCCCCAGCCTTCTTTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR CCA 90 bp AGAAAGTATCTGGAACCCTTGAGAAACTGTAGCACTGTGTGGTGCTaGAAGGGTCGGTCAGGTAATGGATGTGGTAGTGCAGGGTGTCGA +
Preference number: 1 (lower is better)
Translates to: RKYLEPLRNCSTVWC*KGRSGNGCGSAGCR
Trigger: TCGACACCCTGCACTACCACATCCATTACCTGACCGACCCTTCCAGCACCACACAGTGCTACAGTTTCTCAAGGGTTCCAGATACTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR TCA 90 bp GTGACAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTaGAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTTAAC +
Preference number: 1 (lower is better)
Translates to: VTTVSHYNTRVGMAH*RNRPGTSVQYIHFN
Trigger: GTTAAAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGTAGGTGTAGGACCCTaGCCCACAGCTCCTCACCTA +
Preference number: 2 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIVGVGP*PTAPHL
Trigger: TAGGTGAGGAGCTGTGGGCCAGGGTCCTACACCTAC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR GCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCCCCACCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 2 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFPHLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGGTGGGG...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
3UTR-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGAAGGGGTAGAACATTaGGGAACCCAGCCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGREGVEH*GTQPQS
Trigger: AGACTGGGGCTGGGTTCCCCAATGTTCTACCCCTTC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCAACTGTAGCACTGTGTaGTGCTGGAAGGGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGNCSTV*CWKGRS
Trigger: TGACCGACCCTTCCAGCACCACACAGTGCTACAGTT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAACAGGGAAAGAACTaGGTGCTCCCTCTGACAGAC +
Preference number: 2 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGQQGKN*VLPLTD
Trigger: GTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTGTTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACAGCCCCAGTCTAAGTaGGAAGGTCATTTTTACCTT +
Preference number: 2 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIQPQSK*EGHFYL
Trigger: AAGGTAAAAATGACCTTCGCACTTAGACTGGGGCTG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACAGCCCCAGTCTAAGTaGGAAGGTCATTTTTACCTT +
Preference number: 2 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTQPQSK*EGHFYL
Trigger: AAGGTAAAAATGACCTTCGCACTTAGACTGGGGCTG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACAAGACCCTTTCACATaGTACAGGGGAAGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRQDPFT*YRGRGE
Trigger: CTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACACGCCACCTTAAGATaGCAGAGAGAGACAAACACA +
Preference number: 2 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRHATLR*QRETNT
Trigger: TGTGTTTGTCTCTCTCTGCCATCTTAAGGTGGCGTG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGATTATCAAGTGGTATaGAAGAAGGTTAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KPTGSPELSSLHQSQAPADYQVV*KKVKGR
Trigger: CCTGCCTTTAACCTTCTTTCATACCACTTGATAATC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR TCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGGATTATCAAGTGGTATaGAAGAAGGTTAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRDYQVV*KKVKGR
Trigger: CCTGCCTTTAACCTTCTTTCATACCACTTGATAATC...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR TCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGTGGGCATGGCTCACTaGAGGAACAGGCCAGGCACC +
Preference number: 2 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKVGMAH*RNRPGT
Trigger: GGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCAC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGATTATCAAGTGGTATaGAAGAAGGTTAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: DLSDKTLSHGTGEEERERDYQVV*KKVKGR
Trigger: CCTGCCTTTAACCTTCTTTCATACCACTTGATAATC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCCCATGATTATCAAGTaGTATGAAAGAAGGTTAAAG +
Preference number: 2 (lower is better)
Translates to: PLRQDPFTWYRGRGERERPMIIK*YERRLK
Trigger: CTTTAACCTTCTTTCATACCACTTGATAATCATGGG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGATTATCAAGTGGTATaGAAGAAGGTTAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFDYQVV*KKVKGR
Trigger: CCTGCCTTTAACCTTCTTTCATACCACTTGATAATC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGAGCACTGTGTGGTGCTaGAAGGGTCGGTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKSTVWC*KGRSGN
Trigger: ATTACCTGACCGACCCTTCCAGCACCACACAGTGCT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGACACAAAAAGAAGGCTaGGGAACAGCAAAGCCAACA +
Preference number: 2 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKTQKEG*GTAKPT
Trigger: TGTTGGCTTTGCTGTTCCCCAGCCTTCTTTTTGTGT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCCCATGATTATCAAGTaGTATGAAAGAAGGTTAAAG +
Preference number: 2 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKPMIIK*YERRLK
Trigger: CTTTAACCTTCTTTCATACCACTTGATAATCATGGG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR CCA 72 bp CATGAAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTaGCATAGATGTAAGCCCCACACTGGTCACAACAGT +
Preference number: 3 (lower is better)
Translates to: HETGALGQGPQA*HRCKPHTGHNS
Trigger: ACTGTTGTGACCAGTGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
3UTR-3UTR CAA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCTCGGCCCCACCTTCTaGTATGCCCCCAAGCACGTT +
Preference number: 3 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFLGPTF*YAPKHV
Trigger: AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAG...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
3UTR CCA 72 bp AAGGCTGGGGAACAGCAAAGCCAACAGGGAAAGAACTaGGTGCTCCCTCTGACAGACACTAACCTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: KAGEQQSQQGKN*VLPLTDTNLSG
Trigger: CCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTGTTGGCTTTGCTGTTCCCCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CAA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 3 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
3UTR CCA 72 bp CTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATaGTACAGGGGAAGAGGAGAGAGAGAGAGGATACAG +
Preference number: 3 (lower is better)
Translates to: LTFRPLRQDPFT*YRGRGERERIQ
Trigger: CTGTATCCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CAA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCAAGGTCATTTTTACCTaGGGAGCTCTGTTCATGGAA +
Preference number: 3 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGKVIFT*GALFME
Trigger: TTCCATGAACAGAGCTCCCAAGGTAAAAATGACCTT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAAGTATCTGGAACCCTaGAGAAACTGTAGCACTGTG +
Preference number: 3 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFKYLEP*RNCSTV
Trigger: CACAGTGCTACAGTTTCTCAAGGGTTCCAGATACTT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGAGGGGTTAAGCATGTaGACACCATGGTTCACGCCA +
Preference number: 3 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKEGLSM*TPWFTP
Trigger: TGGCGTGAACCATGGTGTCAACATGCTTAACCCCTC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
3UTR-3UTR CAA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 3 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACACTGGTCCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ELWAKAPRPGIDVSPTLVPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...GACCAGTGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GAAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: ETGALGQGPQAWHRCKPHGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...GTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATGTTGCCGGGGGCGGTaGGGGTGGAGGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYICCRGR*GWRSGH
Trigger: GTGCCCACTCCTCCACCCCCACCGCCCCCGGCAACA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR GCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCGGGGGCGGTGGGGGTaGAGGAGTGGGCACACTTGG +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRGRWG*RSGHTW
Trigger: CCAAGTGTGCCCACTCCTCCACCCCCACCGCCCCCG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACAATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KQELWAKAPRPGIDVSPTITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...TGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGTCGGGGAGGGCCAGTaGGCCCTGCCTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIVGEGQ*ALPASL
Trigger: AAGTGAAGCAGGCAGGGCTCACTGGCCCTCCCCGAC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACAGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KQELWAKAPRPGIDVSPTVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...TGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATGGCGCTTACAGGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIWRLQA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCCGGGGGCGGTGGGGGTaGAGGAGTGGGCACACTTGG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFRGRWG*RSGHTW
Trigger: CCAAGTGTGCCCACTCCTCCACCCCCACCGCCCCCG...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTGTTGCCGGGGGCGGTaGGGGTGGAGGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKCCRGR*GWRSGH
Trigger: GTGCCCACTCCTCCACCCCCACCGCCCCCGGCAACA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGTTGCCGGGGGCGGTaGGGGTGGAGGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERCCRGR*GWRSGH
Trigger: GTGCCCACTCCTCCACCCCCACCGCCCCCGGCAACA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATGCTCACCACCTTGGTaGTGCCCCGAGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYICSPPW*CPEAWY
Trigger: GTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGGTCGGGGAGGGCCAGTaGGCCCTGCCTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRVGEGQ*ALPASL
Trigger: AAGTGAAGCAGGCAGGGCTCACTGGCCCTCCCCGAC...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGGTCGGGGAGGGCCAGTaGGCCCTGCCTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERVGEGQ*ALPASL
Trigger: AAGTGAAGCAGGCAGGGCTCACTGGCCCTCCCCGAC...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACACAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: KQELWAKAPRPGIDVSPTQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...TGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAAGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIKGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCTT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: ETGALGQGPQAWHRCKPHMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...GTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGTGGGGGTGGAGGAGTaGGCACACTTGGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIVGVEE*AHLELL
Trigger: GAGCAACTCCAAGTGTGCCCACTCCTCCACCCCCAC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTGTTGCCGGGGGCGGTaGGGGTGGAGGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVCCRGR*GWRSGH
Trigger: GTGCCCACTCCTCCACCCCCACCGCCCCCGGCAACA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATGCTCACCACCTTGGTaGTGCCCCGAGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTICSPPW*CPEAWY
Trigger: GTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATGCTCACCACCTTGGTaGTGCCCCGAGGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTCSPPW*CPEAWY
Trigger: GTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCCAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGGGCCAGACCATAGTTaGGCTCAGCAGCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIGPDHS*AQQLNR
Trigger: CCTGTTCAGCTGCTGAGCTCAACTATGGTCTGGCCC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTGCGGCGGCAGAAGCTaGAGGGTCGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQCGGRS*RVGEGQ
Trigger: CTGGCCCTCCCCGACCCTGCAGCTTCTGCCGCCGCA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGCAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTITSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACAGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KQELWAKAPRPGIDVSPTDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...TGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACGGCAGTGCTCACACTaGGATACCACACCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRQCSH*DTTPRS
Trigger: GCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCGGGGGCGGTGGGGGTaGAGGAGTGGGCACACTTGG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVRGRWG*RSGHTW
Trigger: CCAAGTGTGCCCACTCCTCCACCCCCACCGCCCCCG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACGGGGGCGGTGGGGGTaGAGGAGTGGGCACACTTGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTRGRWG*RSGHTW
Trigger: CCAAGTGTGCCCACTCCTCCACCCCCACCGCCCCCG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGTGGTGCCCCGAGGCGTaGTACACTTGCGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERWCPEA*YTCETA
Trigger: GGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCA...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTGGTGCCCCGAGGCGTaGTACACTTGCGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRWCPEA*YTCETA
Trigger: GGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGGATGCTCACCACCTTaGTGGTGCCCCGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGGCSPP*WCPEAW
Trigger: CCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGGATGCTCACCACCTTaGTGGTGCCCCGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTGCSPP*WCPEAW
Trigger: CCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACGACTTGGGGCAGTCTaGGATTCCAGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIRLGAV*DSSRSS
Trigger: AGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPFHSPLMHYSLGPTFLYITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...ATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACCTCAGGCTTGCCACTaGAGAGGCTATGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIPQACH*RGYGSS
Trigger: ACTACTGCCATAGCCTCTTCAGTGGCAAGCCTGAGG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAAGAACTCATAGAACTTaGCGGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIRTHRT*RGSGGD
Trigger: ATCCCCTCCGCTGCCCCGTCAAGTTCTATGAGTTCT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGGCCCCCCAGGCTCTAGGGTCTaGTCCCCCGAATCCCATGCA +
Preference number: 4 (lower is better)
Translates to: CKTAFVDHHETGALGQGPPGSRV*SPESHA
Trigger: TGCATGGGATTCGGGGGAGCAGACCCTAGAGCCTGG...GGGGCCTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACATTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAAAGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERKGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCTT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATGGAAGACCTGGTCCTaGCACTCCAAGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIWKTWS*HSKTSG
Trigger: GCCTGAGGTCTTGGAGTGGCAGGACCAGGTCTTCCA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATGCAGGAGCTTTTCCTaGCGGCAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTCRSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATGCAGAAGTCCCAGGTaGTGCCATCCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTICRSPR*CHPAAQ
Trigger: CTGAGCAGCTGGATGGCAGCACCTGGGACTTCTGCA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGAGACACCCCGGTTCTaGATCAGCGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIETPRF*ISGLHM
Trigger: CATGTGTAAGCCGCTGATGCAGAACCGGGGTGTCTC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTISPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACACTGGTCAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ELWAKAPRPGIDVSPTLVRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...GACCAGTGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: KNHTPFHSPLMHYSLGPTMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...GGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGTGTGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGGCGCTTACAGGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERWRLQA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTGGCGCTTACAGGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFWRLQA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATCCAGCAGCTTCCCCTaGCGCTTACAGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPASSSFP*RLQAWH
Trigger: GTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGGTGGGGGTGGAGGAGTaGGCACACTTGGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRVGVEE*AHLELL
Trigger: GAGCAACTCCAAGTGTGCCCACTCCTCCACCCCCAC...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATGCCCCCAAGCACGTTACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKHVTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACGAGAATATCCTCCTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIREYPP*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAGGAGGATATTCTCG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACACCATTGGGCCGAGTaGTTTCTCTCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTHHWAE*FLSRTG
Trigger: CCCAGTTCGTGAGAGAAATCACTCGGCCCAATGGTG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCAGGCTCTAGGGTCTaGTCCCCCGAATCCCATGCA +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSPGSRV*SPESHA
Trigger: TGCATGGGATTCGGGGGAGCAGACCCTAGAGCCTGG...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGCCAGGCTCTAGGGTCTaGTCCCCCGAATCCCATGCA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKPGSRV*SPESHA
Trigger: TGCATGGGATTCGGGGGAGCAGACCCTAGAGCCTGG...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATGCCCCCAAGCACGTTAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKHVRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAAAGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERKGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCTT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTTTCCTGCCGGCAGTaGTCACACTGGGATACCACA +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIFSCRQ*SHWDTT
Trigger: TGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGAGGCGTGGTACACTTaGGAGACTGCCGTACCACAT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIEAWYT*ETAVPH
Trigger: ATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATCACCACCTTGGTGGTaGCCCGAGGCGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRSPPWW*PEAWYT
Trigger: AGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPSQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TGTGTTGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGCAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CVAKPLLLTIMKQELWAKQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...CTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTCAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGTGCACAAGACATCTTaGTGCCCATTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPVHKTS*CPLKSA
Trigger: GGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCAC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTCCAGCAGCTTCCCCTaGCGCTTACAGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSSSFP*RLQAWH
Trigger: GTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACCAGTACAACTAGGCTaGCTGCTCAGAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIPVQLG*LLRESL
Trigger: CAGGGACTCTCTGAGCAGCCAGCCTAGTTGTACTGG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCAGGACCTGTGTTGTTaGGGAGGAGTGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTQDLCC*GGVWAA
Trigger: GGCAGCCCACACTCCTCCCCAACAACACAGGTCCTG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR TCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCGACTTGGGGCAGTCTaGGATTCCAGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFRLGAV*DSSRSS
Trigger: AGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCG...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCCCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACACCGGGATAGGCATTaGGAAAGGCACCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAHRDRH*ERHRDF
Trigger: AAAGTCCCGGTGCCTTTCTCAATGCCTATCCCGGTG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGGGCCAGACCATAGTTaGGCTCAGCAGCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGGPDHS*AQQLNR
Trigger: CCTGTTCAGCTGCTGAGCTCAACTATGGTCTGGCCC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGGGCCAGACCATAGTTaGGCTCAGCAGCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKGPDHS*AQQLNR
Trigger: CCTGTTCAGCTGCTGAGCTCAACTATGGTCTGGCCC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCACCATTGGGCCGAGTaGTTTCTCTCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERHHWAE*FLSRTG
Trigger: CCCAGTTCGTGAGAGAAATCACTCGGCCCAATGGTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAAGAACTCATAGAACTTaGCGGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPARTHRT*RGSGGD
Trigger: ATCCCCTCCGCTGCCCCGTCAAGTTCTATGAGTTCT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACCAGGCTCTAGGGTCTaGTCCCCCGAATCCCATGCA +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIPGSRV*SPESHA
Trigger: TGCATGGGATTCGGGGGAGCAGACCCTAGAGCCTGG...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGGCCCCCAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: CKTAFVDHHETGALGQGPQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...GGGGCCTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTGGAAGACCTGGTCCTaGCACTCCAAGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGWKTWS*HSKTSG
Trigger: GCCTGAGGTCTTGGAGTGGCAGGACCAGGTCTTCCA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTGCAGGAGCTTTTCCTaGCGGCAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGCRSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTGCAGAAGTCCCAGGTaGTGCCATCCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKCRSPR*CHPAAQ
Trigger: CTGAGCAGCTGGATGGCAGCACCTGGGACTTCTGCA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTGCAGAAGTCCCAGGTaGTGCCATCCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFCRSPR*CHPAAQ
Trigger: CTGAGCAGCTGGATGGCAGCACCTGGGACTTCTGCA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAGACACCCCGGTTCTaGATCAGCGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAETPRF*ISGLHM
Trigger: CATGTGTAAGCCGCTGATGCAGAACCGGGGTGTCTC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTCCAGAAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIFQKSL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTTCTGGAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAGCGGAGGGGATTCATaGGATTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTISGGDS*DSHAAL
Trigger: TAGAGCAGCGTGAGAATCGCATGAATCCCCTCCGCT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPASQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSITSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATTGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPATWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTCACGGCAGCAGAACTaGAAGACCTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGSRQQN*KTWSCH
Trigger: GTGGCAGGACCAGGTCTTCCAGTTCTGCTGCCGTGA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTGGCGCTTACAGGCATaGCACCGGGCAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQWRLQA*HRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTCCAGCAGCTTCCCCTaGCGCTTACAGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVSSSFP*RLQAWH
Trigger: GTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATCTGGGTATCCAAGTTaGGTTGGTTCTGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYISGYPS*VGSAGC
Trigger: ACAGCCAGCAGAACCAACCCAACTTGGATACCCAGA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGGGGTCCTCACTGTGTaGTTGTTCTCCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIGVLTV*LFSTLV
Trigger: AACCAAAGTGGAGAACAACCACACAGTGAGGACCCC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGTGGGGGTGGAGGAGTaGGCACACTTGGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVVGVEE*AHLELL
Trigger: GAGCAACTCCAAGTGTGCCCACTCCTCCACCCCCAC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCCAGTACAACTAGGCTaGCTGCTCAGAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERPVQLG*LLRESL
Trigger: CAGGGACTCTCTGAGCAGCCAGCCTAGTTGTACTGG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTGGTGCCCCGAGGCGTaGTACACTTGCGAGACTGCC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVWCPEA*YTCETA
Trigger: GGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGGGATGCTCACCACCTTaGTGGTGCCCCGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWGCSPP*WCPEAW
Trigger: CCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCC...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATTTCCTCTGTCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIFPLSD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATTTCCTCTGTCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTFPLSD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATCGACTTGGGGCAGTCTaGGATTCCAGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHRLGAV*DSSRSS
Trigger: AGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCG...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCCTCAGGCTTGCCACTaGAGAGGCTATGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGPQACH*RGYGSS
Trigger: ACTACTGCCATAGCCTCTTCAGTGGCAAGCCTGAGG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACCTCAGGCTTGCCACTaGAGAGGCTATGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERPQACH*RGYGSS
Trigger: ACTACTGCCATAGCCTCTTCAGTGGCAAGCCTGAGG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTGTTGGTTGCAGAAATaGCGGATTTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAAATCCGTCATTTCTGCAACCAACA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCACCGGGATAGGCATTaGGAAAGGCACCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGHRDRH*ERHRDF
Trigger: AAAGTCCCGGTGCCTTTCTCAATGCCTATCCCGGTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGGGCCAGACCATAGTTaGGCTCAGCAGCTGAACAGG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVGPDHS*AQQLNR
Trigger: CCTGTTCAGCTGCTGAGCTCAACTATGGTCTGGCCC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCAGAACTCATAGAACTTaGCGGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFRTHRT*RGSGGD
Trigger: ATCCCCTCCGCTGCCCCGTCAAGTTCTATGAGTTCT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGAATACCAGAGAGGTaGTTCGGCAATGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRIPER*FGNAGA
Trigger: CGCTCCTGCATTGCCGAATCACCTCTCTGGTATTCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACAGCTAAAATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIQLKCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCCAGGCTCTAGGGTCTaGTCCCCCGAATCCCATGCA +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVPGSRV*SPESHA
Trigger: TGCATGGGATTCGGGGGAGCAGACCCTAGAGCCTGG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATCAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACCCTCAGGGCTAGTATaGTGGAACTTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRPSGLV*WNLVQQ
Trigger: CTGCTGGACCAAGTTCCAGCATACTAGCCCTGAGGG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGCCCTCAGGGCTAGTATaGTGGAACTTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKPSGLV*WNLVQQ
Trigger: CTGCTGGACCAAGTTCCAGCATACTAGCCCTGAGGG...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATGGAAGACCTGGTCCTaGCACTCCAAGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERWKTWS*HSKTSG
Trigger: GCCTGAGGTCTTGGAGTGGCAGGACCAGGTCTTCCA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATCTTACAGTCCTCGCTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRSYSPR*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGTAGCTCATCACCTTTaGTGGTCTCTCCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIVAHHL*WSLHWR
Trigger: ACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTAC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGAGGCGTGGTACACTTaGGAGACTGCCGTACCACAT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKEAWYT*ETAVPH
Trigger: ATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGAGGCGTGGTACACTTaGGAGACTGCCGTACCACAT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFEAWYT*ETAVPH
Trigger: ATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTCACCACCTTGGTGGTaGCCCGAGGCGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGSPPWW*PEAWYT
Trigger: AGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTCACCACCTTGGTGGTaGCCCGAGGCGTGGTACACT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVSPPWW*PEAWYT
Trigger: AGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGGHSSG*SPPWWC
Trigger: GCACCACCAAGGTGGTGAGCATCCGCTACTATGCCC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGCGGAGGGGATTCATaGGATTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSGGDS*DSHAAL
Trigger: TAGAGCAGCGTGAGAATCGCATGAATCCCCTCCGCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGCATGCTCTCCAACATaGTTCGGTCCATGGGAATCA +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTACSPT*FGPWES
Trigger: TGATTCCCATGGACCGAAGCATGTTGGAGAGCATGC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TPFHSPLMHYSLGPTFLYKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...ATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPASQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGGCCCCAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CKTAFVDHHETGALGQGPSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...GGGGCCTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCGTGCACAAGACATCTTaGTGCCCATTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFVHKTS*CPLKSA
Trigger: GGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCAC...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPADVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGGCCCCACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: CKTAFVDHHETGALGQGPTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...GGGGCCTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATGCCCCCAAGCACGTTTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLMHYSLGPTFLYAPKHVCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGTWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGACTTGGTCCAGCAGCTaGGGCTGCAGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKTWSSS*GCRTGR
Trigger: TCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATCAGGGCTAGTATGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPASGLVC*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCATACTAGCCCTGA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCGGCAGTGCTCACACTaGGATACCACACCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGRQCSH*DTTPRS
Trigger: GCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYITITGT*SYSPRC
Trigger: GCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTCCAGCAGCTTCCCCTaGCGCTTACAGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSSSFP*RLQAWH
Trigger: GTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGTGGGGGTGGAGGAGTaGGCACACTTGGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFVGVEE*AHLELL
Trigger: GAGCAACTCCAAGTGTGCCCACTCCTCCACCCCCAC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAATATGGGCACTGGGATaGGCAGCACAATCACTTGTG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTIWALG*AAQSLV
Trigger: CACAAGTGATTGTGCTGCCCATCCCAGTGCCCATAT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCCCAGTACAACTAGGCTaGCTGCTCAGAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFPVQLG*LLRESL
Trigger: CAGGGACTCTCTGAGCAGCCAGCCTAGTTGTACTGG...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTTTCCTCTGTCGGACTaGGGCATAGTAGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRFPLSD*GIVADA
Trigger: AGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFITSGV*HPGPGS
Trigger: AGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGAT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAACAGGAGCTCTGGGCCAAGGCCCCCAGGCCTGGCATAGATGTAAGCCCCACAATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: KQELWAKAPRPGIDVSPTISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...TGTGGGGCTTACATCTATGCCAGGCCTGGGGGCCTTGGCCCAGAGCTCCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTGTTGGTTGCAGAAATaGCGGATTTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAAATCCGTCATTTCTGCAACCAACA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKFSTLV*EGVWGL
Trigger: CAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFFSTLV*EGVWGL
Trigger: CAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATCCATTGGCGTATTTTaGCTGTACCCAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYISIGVF*LYPAFP
Trigger: TGGAAATGCTGGGTACAGTCAAAATACGCCAATGGA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGTTGAGCTCAGCAGCTaGACAGGCGAGAATATCCTC +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRVELSS*TGENIL
Trigger: GAGGATATTCTCGCCTGTTCAGCTGCTGAGCTCAAC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGAATACCAGAGAGGTaGTTCGGCAATGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKRIPER*FGNAGA
Trigger: CGCTCCTGCATTGCCGAATCACCTCTCTGGTATTCT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAGGGCCAGTGAGCCCTaGCTGCTTCACTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRRASEP*LLHFVR
Trigger: TCTTACAAAGTGAAGCAGGCAGGGCTCACTGGCCCT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGCCCTCAGGGCTAGTATaGTGGAACTTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGPSGLV*WNLVQQ
Trigger: CTGCTGGACCAAGTTCCAGCATACTAGCCCTGAGGG...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGGAAGACCTGGTCCTaGCACTCCAAGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGWKTWS*HSKTSG
Trigger: GCCTGAGGTCTTGGAGTGGCAGGACCAGGTCTTCCA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATTTTCCTGCCGGCAGTaGTCACACTGGGATACCACA +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRFSCRQ*SHWDTT
Trigger: TGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTTGCAGGAGCTTTTCCTaGCGGCAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFCRSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCA...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATGCAGGAGCTTTTCCTaGCGGCAGTGCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTCRSFS*RQCSHW
Trigger: CCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTCTTACAGTCCTCGCTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVSYSPR*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGAGACACCCCGGTTCTaGATCAGCGGCTTACACATG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVETPRF*ISGLHM
Trigger: CATGTGTAAGCCGCTGATGCAGAACCGGGGTGTCTC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGCTCTGCAATCATCTCTaGCATGGCCAGGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKLCNHL*HGQDVS
Trigger: GCTGACATCCTGGCCATGGCAGAGATGATTGCAGAG...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACTCTGCAATCATCTCTaGCATGGCCAGGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERLCNHL*HGQDVS
Trigger: GCTGACATCCTGGCCATGGCAGAGATGATTGCAGAG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACA +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSASKS*PGSSKT
Trigger: TGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGCGGAGGGGATTCATaGGATTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSGGDS*DSHAAL
Trigger: TAGAGCAGCGTGAGAATCGCATGAATCCCCTCCGCT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGCATGGGTTTGGCTTTaGTGGTCTCTCCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERAWVWL*WSLHWR
Trigger: ACGCCAATGGAGAGACCAGCAAAGCCAAACCCATGC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR GCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATCCCCACCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHPHLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGGTGGGG...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSISQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TGTGTTGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CVAKPLLLTIMKQELWAKVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...CTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGTGCACAAGACATCTTaGTGCCCATTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERVHKTS*CPLKSA
Trigger: GGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCAC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTCAGGGCTAGTATGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSGLVC*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCATACTAGCCCTGA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTITITGT*SYSPRC
Trigger: GCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTATTTGCCCACGCCAGTaGATCGTTTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTICPRQ*IVSSSF
Trigger: GAAGCTGCTGGAAACGATCCACTGGCGTGGGCAAAT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCATTTGCCCACGCCAGTaGATCGTTTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFICPRQ*IVSSSF
Trigger: GAAGCTGCTGGAAACGATCCACTGGCGTGGGCAAAT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAATTTGCCCACGCCAGTaGATCGTTTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERICPRQ*IVSSSF
Trigger: GAAGCTGCTGGAAACGATCCACTGGCGTGGGCAAAT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGTTCAGGAGGCTTTCTaGCCCACTCTGGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRVQEAF*PTLGIQ
Trigger: TTGGATACCCAGAGTGGGCCAGAAAGCCTCCTGAAC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGTTCAGGAGGCTTTCTaGCCCACTCTGGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKVQEAF*PTLGIQ
Trigger: TTGGATACCCAGAGTGGGCCAGAAAGCCTCCTGAAC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGATTCCCATTCTCGTCTaGGGTCCTCACTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRIPILV*GPHCVV
Trigger: AACCACACAGTGAGGACCCCAGACGAGAATGGGAAT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACTGTCTGACTTCCTTTaGACTTCATTTCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILSDFL*TSFPPC
Trigger: GCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCACAAATATGGGCACTaGGATGGGCAGCACAATCAC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERHKYGH*DGQHNH
Trigger: GTGATTGTGCTGCCCATCCCAGTGCCCATATTTGTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACACAAATATGGGCACTaGGATGGGCAGCACAATCAC +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAHKYGH*DGQHNH
Trigger: GTGATTGTGCTGCCCATCCCAGTGCCCATATTTGTG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGCACTGGCACAAATATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGALAQI*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATATTTGTGCCAGTGC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGGCACCGGGACTTTCTaGCAGTATAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTGTGTF*QYRCIG
Trigger: GCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGGCACCGGGACTTTCTaGCAGTATAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFGTGTF*QYRCIG
Trigger: GCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCCTTCAGCTCCTCAATaGTCTCCACGATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRPSAPQ*SPRSSL
Trigger: CAGAGAAGATCGTGGAGACCATTGAGGAGCTGAAGG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATGCTCAGAGAGTCCCTaGAACAGCTTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTICSESP*NSFQKA
Trigger: TGCTTTCTGAAAGCTGTTCCAGGGACTCTCTGAGCA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGCTCATCACCTTTGCTaGTCTCTCCATTGGCGTATT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIAHHLC*SLHWRI
Trigger: AATACGCCAATGGAGAGACCAGCAAAGGTGATGAGC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGCTCATCACCTTTGCTaGTCTCTCCATTGGCGTATT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTAHHLC*SLHWRI
Trigger: AATACGCCAATGGAGAGACCAGCAAAGGTGATGAGC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCATCTCCTGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSISCSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCAGGAGAT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATATCTCCTGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHISCSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCAGGAGAT...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGCGACTTGGGGCAGTCTaGGATTCCAGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQRLGAV*DSSRSS
Trigger: AGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCG...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGCATCTTGGTGCCCATTaGAGAGCGCCCAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWHLGAH*RAPSPL
Trigger: CAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATG...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTGTTGGTTGCAGAAATaGCGGATTTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAAATCCGTCATTTCTGCAACCAACA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCACCGGGATAGGCATTaGGAAAGGCACCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGHRDRH*ERHRDF
Trigger: AAAGTCCCGGTGCCTTTCTCAATGCCTATCCCGGTG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAGCATCAGCCTCTTTTaGCCCTTCCTCATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRSISLF*PFLMAL
Trigger: TAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTAGCATCAGCCTCTTTTaGCCCTTCCTCATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTSISLF*PFLMAL
Trigger: TAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGCATCAGCCTCTTTTaGCCCTTCCTCATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSISLF*PFLMAL
Trigger: TAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAAGCATTGACACCGTATaGATAGTTGAGACCAGTACA +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYISIDTV*IVETST
Trigger: TGTACTGGTCTCAACTATTCATACGGTGTCAATGCT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATCCATTGGCGTATTTTaGCTGTACCCAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTISIGVF*LYPAFP
Trigger: TGGAAATGCTGGGTACAGTCAAAATACGCCAATGGA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCACCATTGGGCCGAGTaGTTTCTCTCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGHHWAE*FLSRTG
Trigger: CCCAGTTCGTGAGAGAAATCACTCGGCCCAATGGTG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAGAACTCATAGAACTTaGCGGGGCAGCGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFRTHRT*RGSGGD
Trigger: ATCCCCTCCGCTGCCCCGTCAAGTTCTATGAGTTCT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCAGCTAAAATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERQLKCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACAGTCTTCTGGCATATaGTGCAGCGAGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTQSSGI*CSEWHR
Trigger: CCGATGCCACTCGCTGCAGCATATGCCAGAAGACTG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACCAAGCACGTTGTGTTaGAAAACCGCTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTPSTLC*KTAFVD
Trigger: GTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACCAAGCACGTTGTGTTaGAAAACCGCTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIPSTLC*KTAFVD
Trigger: GTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTTTTCCTGCCGGCAGTaGTCACACTGGGATACCACA +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVFSCRQ*SHWDTT
Trigger: TGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATTTTCCTGCCGGCAGTaGTCACACTGGGATACCACA +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERFSCRQ*SHWDTT
Trigger: TGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTGCAGAAGTCCCAGGTaGTGCCATCCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWCRSPR*CHPAAQ
Trigger: CTGAGCAGCTGGATGGCAGCACCTGGGACTTCTGCA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTCTTACAGTCCTCGCTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSYSPR*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTCTGGCAGTATAGATaGATAGGCACTGGCACAAAT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIFWQYR*IGTGTN
Trigger: ATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCTCTGCAATCATCTCTaGCATGGCCAGGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVLCNHL*HGQDVS
Trigger: GCTGACATCCTGGCCATGGCAGAGATGATTGCAGAG...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACCTCTGCACTCTGGTTaGTCACAAGATCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIPLHSG*SQDHKD
Trigger: ATCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTTCCAGAAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGFQKSL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTTCTGGAA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATTCCAGAAGTCCCTCTaGACTCTGGTTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRFQKSL*TLVAHK
Trigger: CTTGTGAGCAACCAGAGTGCAGAGGGACTTCTGGAA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTTCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACA +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTSASKS*PGSSKT
Trigger: TGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGA...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGCATGCTCTCCAACATaGTTCGGTCCATGGGAATCA +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFACSPT*FGPWES
Trigger: TGATTCCCATGGACCGAAGCATGTTGGAGAGCATGC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTGTGTTGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAAGCCCCAGTAGCTCAGTaGCTCCATCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LCCKTAFVDHHETGALGQAPVAQ*LHPELL
Trigger: GAGGAGTTCTGGATGGAGCCACTGAGCTACTGGGGC...TTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSITMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATT +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWAPGPE*HKVLII
Trigger: AATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGC...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGTGCACAAGACATCTTaGTGCCCATTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVVHKTS*CPLKSA
Trigger: GGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCAC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSITSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPACWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACTTGCACCAGACACATaGGTACACACGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILAPDT*VHTCVF
Trigger: AAAAACACACGTGTGTACCCATGTGTCTGGTGCAAG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTCACGGCAGCAGAACTaGAAGACCTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWSRQQN*KTWSCH
Trigger: GTGGCAGGACCAGGTCTTCCAGTTCTGCTGCCGTGA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTATTTGCCCACGCCAGTaGATCGTTTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVICPRQ*IVSSSF
Trigger: GAAGCTGCTGGAAACGATCCACTGGCGTGGGCAAAT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCTCTGGGTATCCAAGTTaGGTTGGTTCTGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGSGYPS*VGSAGC
Trigger: ACAGCCAGCAGAACCAACCCAACTTGGATACCCAGA...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTCTGGGTATCCAAGTTaGGTTGGTTCTGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSGYPS*VGSAGC
Trigger: ACAGCCAGCAGAACCAACCCAACTTGGATACCCAGA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRGCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAACC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGGGGTCCTCACTGTGTaGTTGTTCTCCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFGVLTV*LFSTLV
Trigger: AACCAAAGTGGAGAACAACCACACAGTGAGGACCCC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAATTCCCATTCTCGTCTaGGGTCCTCACTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERIPILV*GPHCVV
Trigger: AACCACACAGTGAGGACCCCAGACGAGAATGGGAAT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTTCAGCGGCTTACACATaGCAGCTTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTSAAYT*QLCFCG
Trigger: CCCGCAAAAACAAAGCTGCCATGTGTAAGCCGCTGA...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACTGTCTGACTTCCTTTaGACTTCATTTCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPALSDFL*TSFPPC
Trigger: GCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGATATGGGCACTGGGATaGGCAGCACAATCACTTGTG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKIWALG*AAQSLV
Trigger: CACAAGTGATTGTGCTGCCCATCCCAGTGCCCATAT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCACAAATATGGGCACTaGGATGGGCAGCACAATCAC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGHKYGH*DGQHNH
Trigger: GTGATTGTGCTGCCCATCCCAGTGCCCATATTTGTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGCACTGGCACAAATATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQALAQI*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATATTTGTGCCAGTGC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGCACTGGCACAAATATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVALAQI*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATATTTGTGCCAGTGC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGCACTGGCACAAATATaGGCACTGGGATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFALAQI*ALGWAA
Trigger: TGCTGCCCATCCCAGTGCCCATATTTGTGCCAGTGC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCCTTCAGCTCCTCAATaGTCTCCACGATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTPSAPQ*SPRSSL
Trigger: CAGAGAAGATCGTGGAGACCATTGAGGAGCTGAAGG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACCAGTACAACTAGGCTaGCTGCTCAGAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTPVQLG*LLRESL
Trigger: CAGGGACTCTCTGAGCAGCCAGCCTAGTTGTACTGG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTGTTGGGGAGGAGTGTaGGCTGCCAGGTACTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWCWGGV*AARYSE
Trigger: CTCTGAGTACCTGGCAGCCCACACTCCTCCCCAACA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAACATGCTTCGGTCCATaGGAATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTTCFGP*ESQNTR
Trigger: TCTGGTATTCTGTGATTCCCATGGACCGAAGCATGT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTGGGTTTGGCTTTGCTaGTCTCTCCATTGGCGTATT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRWVWLC*SLHWRI
Trigger: AATACGCCAATGGAGAGACCAGCAAAGCCAAACCCA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
3UTR CAA 72 bp GTATGCCCCCAAGCACGTTGTGTTGCAAAACCGCTTTaGTTGACCATCATGAAACAGGAGCTCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VCPQARCVAKPL*LTIMKQELWAK
Trigger: CTTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGTGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAACAGTAAGTACAGGTaGTACAACATAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTNSKYR*YNISPA
Trigger: AGCTGGGCTTATGTTGTATCACCTGTACTTACTGTT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATGTTGGTTGCAGAAATaGCGGATTTGCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTCWLQK*RICPRQ
Trigger: CTGGCGTGGGCAAATCCGTCATTTCTGCAACCAACA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATTGGACTCAGAAGACTaGCTGTTCAGGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERLDSED*LFRRLS
Trigger: AGAAAGCCTCCTGAACAGTCAGTCTTCTGAGTCCAA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVFSTLV*EGVWGL
Trigger: CAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTTCTCCACTTTGGTTTaGGAGGGTGTCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGFSTLV*EGVWGL
Trigger: CAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAGCATTGACACCGTATaGATAGTTGAGACCAGTACA +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTISIDTV*IVETST
Trigger: TGTACTGGTCTCAACTATTCATACGGTGTCAATGCT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGTCCATTGGCGTATTTTaGCTGTACCCAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERSIGVF*LYPAFP
Trigger: TGGAAATGCTGGGTACAGTCAAAATACGCCAATGGA...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACGAGAATATCCTCCTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTREYPP*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAGGAGGATATTCTCG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGTTGAGCTCAGCAGCTaGACAGGCGAGAATATCCTC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQVELSS*TGENIL
Trigger: GAGGATATTCTCGCCTGTTCAGCTGCTGAGCTCAAC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGTTGAGCTCAGCAGCTaGACAGGCGAGAATATCCTC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFVELSS*TGENIL
Trigger: GAGGATATTCTCGCCTGTTCAGCTGCTGAGCTCAAC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGAATACCAGAGAGGTaGTTCGGCAATGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVRIPER*FGNAGA
Trigger: CGCTCCTGCATTGCCGAATCACCTCTCTGGTATTCT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTTGAGCGCAGGGACATaGGAGGAGAGCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKLSAGT*EESAGA
Trigger: GGCCCCGGCGCTCTCCTCGCATGTCCCTGCGCTCAA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGTGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGTTTTTCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTVFLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGAAAAAC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGCCCTCAGGGCTAGTATaGTGGAACTTGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWPSGLV*WNLVQQ
Trigger: CTGCTGGACCAAGTTCCAGCATACTAGCCCTGAGGG...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGCAGACACTGTTGGTTaGAGAAATGACGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFADTVG*RNDGFA
Trigger: GGCAAATCCGTCATTTCTGCAACCAACAGTGTCTGC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGCAGACACTGTTGGTTaGAGAAATGACGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKADTVG*RNDGFA
Trigger: GGCAAATCCGTCATTTCTGCAACCAACAGTGTCTGC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGCAGACACTGTTGGTTaGAGAAATGACGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGADTVG*RNDGFA
Trigger: GGCAAATCCGTCATTTCTGCAACCAACAGTGTCTGC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACTCTGCAATCATCTCTaGCATGGCCAGGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLCNHL*HGQDVS
Trigger: GCTGACATCCTGGCCATGGCAGAGATGATTGCAGAG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGTAGCTCATCACCTTTaGTGGTCTCTCCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGVAHHL*WSLHWR
Trigger: ACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTAC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAAACCCCCAGTTGCTTaGACTCCCAGAGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVKPPVA*TPRGVL
Trigger: AAGAACACCTCTGGGAGTGCAAGCAACTGGGGGTTT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGTACACTTGCGAGACTaGCGTACCACATTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAVHLRD*RTTLVK
Trigger: TTTCACTAATGTGGTACGGCAGTCTCGCAAGTGTAC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAGCGGAGGGGATTCATaGGATTCTCACGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFSGGDS*DSHAAL
Trigger: TAGAGCAGCGTGAGAATCGCATGAATCCCCTCCGCT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGCATGCTCTCCAACATaGTTCGGTCCATGGGAATCA +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERACSPT*FGPWES
Trigger: TGATTCCCATGGACCGAAGCATGTTGGAGAGCATGC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCAGGGCTCCAGAGGATaGAGACGGACCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIQGSRG*RRTWGS
Trigger: GCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCCCTG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGTGCACAAGACATCTTaGTGCCCATTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVVHKTS*CPLKSA
Trigger: GGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCAC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGATGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCTTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPRPFRHLYLSPKNHTPFTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...GAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACTTGCACCAGACACATaGGTACACACGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPALAPDT*VHTCVF
Trigger: AAAAACACACGTGTGTACCCATGTGTCTGGTGCAAG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTCAGGGCTAGTATGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSGLVC*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCATACTAGCCCTGA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGTTCAGGAGGCTTTCTaGCCCACTCTGGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFVQEAF*PTLGIQ
Trigger: TTGGATACCCAGAGTGGGCCAGAAAGCCTCCTGAAC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGGCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAACC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVGCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAACC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATCAGCGGCTTACACATaGCAGCTTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERSAAYT*QLCFCG
Trigger: CCCGCAAAAACAAAGCTGCCATGTGTAAGCCGCTGA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGCACAATCACTTGTaGCTTCCACTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGQHNHL*LPLFCL
Trigger: CAGACAGAAGAGTGGAAGCCACAAGTGATTGTGCTG...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTATATGGGCACTGGGATaGGCAGCACAATCACTTGTG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVIWALG*AAQSLV
Trigger: CACAAGTGATTGTGCTGCCCATCCCAGTGCCCATAT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGCACAAATATGGGCACTaGGATGGGCAGCACAATCAC +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGHKYGH*DGQHNH
Trigger: GTGATTGTGCTGCCCATCCCAGTGCCCATATTTGTG...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGGCACCGGGACTTTCTaGCAGTATAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFGTGTF*QYRCIG
Trigger: GCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGGCACCGGGACTTTCTaGCAGTATAGATGCATAGGC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVGTGTF*QYRCIG
Trigger: GCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGAGGAAGTCTACACTTaGGTTAATGTCCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIEEVYT*VNVQRI
Trigger: AATCCTTTGGACATTAACCCAAGTGTAGACTTCCTC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTGCTCAGAGAGTCCCTaGAACAGCTTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKCSESP*NSFQKA
Trigger: TGCTTTCTGAAAGCTGTTCCAGGGACTCTCTGAGCA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTTGCTGGTCTCTCCATTaGCGTATTTTGACTGTACCC +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTCWSLH*RILTVP
Trigger: GGGTACAGTCAAAATACGCCAATGGAGAGACCAGCA...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGACATGCTTCGGTCCATaGGAATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRTCFGP*ESQNTR
Trigger: TCTGGTATTCTGTGATTCCCATGGACCGAAGCATGT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCACCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTTGGACTCAGAAGACTaGCTGTTCAGGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGLDSED*LFRRLS
Trigger: AGAAAGCCTCCTGAACAGTCAGTCTTCTGAGTCCAA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATTCCACTCTTCTGTCTaGCTTCCTTTGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAFHSSV*LPLDFI
Trigger: AATGAAGTCCAAAGGAAGTCAGACAGAAGAGTGGAA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGAGCATCAGCCTCTTTTaGCCCTTCCTCATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSISLF*PFLMAL
Trigger: TAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKSSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRSSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAGCTTTCAGGACATTTTaGGAGATAGAACTCATAGAA +
Preference number: 4 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIAFRTF*EIELIE
Trigger: TTCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGC...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGAGAATACCAGAGAGGTaGTTCGGCAATGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWRIPER*FGNAGA
Trigger: CGCTCCTGCATTGCCGAATCACCTCTCTGGTATTCT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAGGCTGCCCTTGGGTATaGTCCTCCTCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSGCPWV*SSSCPG
Trigger: CCCTGGGCAGGAGGAGGAGCATACCCAAGGGCAGCC...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACCAAGCACGTTGTGTTaGAAAACCGCTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERPSTLC*KTAFVD
Trigger: GTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIRTGRL*DQLCCS
Trigger: ACTACAACAAAGTTGATCGCACAGTCTACCAGTTCT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGTTCTGGCAGTATAGATaGATAGGCACTGGCACAAAT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRFWQYR*IGTGTN
Trigger: ATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAA...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCCTCTGCACTCTGGTTaGTCACAAGATCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTPLHSG*SQDHKD
Trigger: ATCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTTCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFSASKS*PGSSKT
Trigger: TGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGA...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGTAGCTCATCACCTTTaGTGGTCTCTCCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTVAHHL*WSLHWR
Trigger: ACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTAC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGAAACCCCCAGTTGCTTaGACTCCCAGAGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGKPPVA*TPRGVL
Trigger: AAGAACACCTCTGGGAGTGCAAGCAACTGGGGGTTT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAAACCCCCAGTTGCTTaGACTCCCAGAGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVKPPVA*TPRGVL
Trigger: AAGAACACCTCTGGGAGTGCAAGCAACTGGGGGTTT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGCATGCTCTCCAACATaGTTCGGTCCATGGGAATCA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQACSPT*FGPWES
Trigger: TGATTCCCATGGACCGAAGCATGTTGGAGAGCATGC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTKFHVY*KVSSQG
Trigger: CCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACGGATGGAGACGGACCTaGGGGAGCCCATCCTCGACT +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHGWRRT*GSPSST
Trigger: AGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCC...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPSPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCATGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGCTGGAATGCTCTCAGTaGAGTCCACAACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWLECSQ*SPQPQA
Trigger: AGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCAG...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCCCAGACTGGGGGATTaGACGCTGCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKPRLGD*TLLLGL
Trigger: GAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPICCSE*HRQDPQ
Trigger: CTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATTTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTCAGGGCTAGTATGCTaGAACTTGGTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWSGLVC*NLVQQL
Trigger: CAGCTGCTGGACCAAGTTCCAGCATACTAGCCCTGA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVTITGT*SYSPRC
Trigger: GCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTCTGGGTATCCAAGTTaGGTTGGTTCTGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVSGYPS*VGSAGC
Trigger: ACAGCCAGCAGAACCAACCCAACTTGGATACCCAGA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQGCSPL*FERVSG
Trigger: CCCAGACACCCTCTCAAACCAAAGTGGAGAACAACC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGGGGTCCTCACTGTGTaGTTGTTCTCCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFGVLTV*LFSTLV
Trigger: AACCAAAGTGGAGAACAACCACACAGTGAGGACCCC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAATTCCCATTCTCGTCTaGGGTCCTCACTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTIPILV*GPHCVV
Trigger: AACCACACAGTGAGGACCCCAGACGAGAATGGGAAT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTCAGCGGCTTACACATaGCAGCTTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVSAAYT*QLCFCG
Trigger: CCCGCAAAAACAAAGCTGCCATGTGTAAGCCGCTGA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTCAGCGGCTTACACATaGCAGCTTTGTTTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSAAYT*QLCFCG
Trigger: CCCGCAAAAACAAAGCTGCCATGTGTAAGCCGCTGA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGCAGCACAATCACTTGTaGCTTCCACTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGQHNHL*LPLFCL
Trigger: CAGACAGAAGAGTGGAAGCCACAAGTGATTGTGCTG...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGATATGGGCACTGGGATaGGCAGCACAATCACTTGTG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQIWALG*AAQSLV
Trigger: CACAAGTGATTGTGCTGCCCATCCCAGTGCCCATAT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCCTTCAGCTCCTCAATaGTCTCCACGATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVPSAPQ*SPRSSL
Trigger: CAGAGAAGATCGTGGAGACCATTGAGGAGCTGAAGG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAGAGGAAGTCTACACTTaGGTTAATGTCCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTEEVYT*VNVQRI
Trigger: AATCCTTTGGACATTAACCCAAGTGTAGACTTCCTC...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTGCTCAGAGAGTCCCTaGAACAGCTTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVCSESP*NSFQKA
Trigger: TGCTTTCTGAAAGCTGTTCCAGGGACTCTCTGAGCA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTGCTGGTCTCTCCATTaGCGTATTTTGACTGTACCC +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGCWSLH*RILTVP
Trigger: GGGTACAGTCAAAATACGCCAATGGAGAGACCAGCA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAACATGCTTCGGTCCATaGGAATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERTCFGP*ESQNTR
Trigger: TCTGGTATTCTGTGATTCCCATGGACCGAAGCATGT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTACATGCTTCGGTCCATaGGAATCACAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTTCFGP*ESQNTR
Trigger: TCTGGTATTCTGTGATTCCCATGGACCGAAGCATGT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTGTGTTGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAACCATTGCTGACCTCATaGAGAACCTCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LCCKTAFVDHHETGALGQPLLTS*RTSPVF
Trigger: GAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGG...TTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAACAGTAAGTACAGGTaGTACAACATAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKNSKYR*YNISPA
Trigger: AGCTGGGCTTATGTTGTATCACCTGTACTTACTGTT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATTGGACTCAGAAGACTaGCTGTTCAGGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLDSED*LFRRLS
Trigger: AGAAAGCCTCCTGAACAGTCAGTCTTCTGAGTCCAA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTTTCCACTCTTCTGTCTaGCTTCCTTTGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTFHSSV*LPLDFI
Trigger: AATGAAGTCCAAAGGAAGTCAGACAGAAGAGTGGAA...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTAGCATTGACACCGTATaGATAGTTGAGACCAGTACA +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTSIDTV*IVETST
Trigger: TGTACTGGTCTCAACTATTCATACGGTGTCAATGCT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTCCATTGGCGTATTTTaGCTGTACCCAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVSIGVF*LYPAFP
Trigger: TGGAAATGCTGGGTACAGTCAAAATACGCCAATGGA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAAGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERSSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCAGCTAAAATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVQLKCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACAGCTAAAATGCGATTaGGCATGCTCTCCAACATGC +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTQLKCD*ACSPTC
Trigger: GCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACGAGAATATCCTCCTTaGTACGCATGGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTREYPP*YAWVWL
Trigger: AAGCCAAACCCATGCGTATCAAGGAGGATATTCTCG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR GCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCTTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFILGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACCAAGCACGTTGTGTTaGAAAACCGCTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIPSTLC*KTAFVD
Trigger: GTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGG...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGTTTTTCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGVFLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGAAAAAC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGTTTTTCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRVFLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGAAAAAC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGAGAACAAGCTGGTCTTaGCATTACGATCCACATGTG +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGRTSWS*HYDPHV
Trigger: CACATGTGGATCGTAATGGCAAGACCAGCTTGTTCT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGAAGGGTCAGAGAGGCTaGGGCGGCAGAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKKGQRG*GGRSCR
Trigger: CCTGCAGCTTCTGCCGCCGCAGCCTCTCTGACCCTT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRTGRL*DQLCCS
Trigger: ACTACAACAAAGTTGATCGCACAGTCTACCAGTTCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGTACACAGCCTTCACTaGAGAAGCTTTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFVHSLH*RSFSLP
Trigger: GGGTAGAGAAAAGCTTCTGCAGTGAAGGCTGTGTAC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGTACACAGCCTTCACTaGAGAAGCTTTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTVHSLH*RSFSLP
Trigger: GGGTAGAGAAAAGCTTCTGCAGTGAAGGCTGTGTAC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGCCTCTGCACTCTGGTTaGTCACAAGATCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGPLHSG*SQDHKD
Trigger: ATCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGG...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACA +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWSASKS*PGSSKT
Trigger: TGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGTACACTTGCGAGACTaGCGTACCACATTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERVHLRD*RTTLVK
Trigger: TTTCACTAATGTGGTACGGCAGTCTCGCAAGTGTAC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACACTAGCCCCAGCCCCTaGATCAGGTGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHTSPSP*IRWHHL
Trigger: GAGGTGATGCCACCTGATCCAGGGGCTGGGGCTAGT...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGCWLGI*RSKNRC
Trigger: GCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGGGAACAGAACAAGCTaGTCTTGCCATTACGATCCA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFGNRTS*SCHYDP
Trigger: TGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCTGTCTGACTTCCTTTaGACTTCATTTCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVLSDFL*TSFPPC
Trigger: GCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTCAGCACAATCACTTGTaGCTTCCACTCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFQHNHL*LPLFCL
Trigger: CAGACAGAAGAGTGGAAGCCACAAGTGATTGTGCTG...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGCCTTCAGCTCCTCAATaGTCTCCACGATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWPSAPQ*SPRSSL
Trigger: CAGAGAAGATCGTGGAGACCATTGAGGAGCTGAAGG...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAGTCCCTCTGCACTCTaGTTGCTCACAAGATCACAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFSPSAL*LLTRSQ
Trigger: TTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTGCTCAGAGAGTCCCTaGAACAGCTTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQCSESP*NSFQKA
Trigger: TGCTTTCTGAAAGCTGTTCCAGGGACTCTCTGAGCA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGCTGGTCTCTCCATTaGCGTATTTTGACTGTACCC +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGCWSLH*RILTVP
Trigger: GGGTACAGTCAAAATACGCCAATGGAGAGACCAGCA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTGCTGGTCTCTCCATTaGCGTATTTTGACTGTACCC +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVCWSLH*RILTVP
Trigger: GGGTACAGTCAAAATACGCCAATGGAGAGACCAGCA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGCTCATCACCTTTGCTaGTCTCTCCATTGGCGTATT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFAHHLC*SLHWRI
Trigger: AATACGCCAATGGAGAGACCAGCAAAGGTGATGAGC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATTCACAGGAGTTGTGTaGTTGTTCTCCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRFTGVV*LFSTLV
Trigger: AACCAAAGTGGAGAACAACCACACAACTCCTGTGAA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS-3UTR TCA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCAGAGTCTCTCCCACTaGAGGGCTAGGGGGTGCATT +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHQSLSH*RARGCI
Trigger: AATGCACCCCCTAGCCCTTCAGTGGGAGAGACTCTG...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCTTTGTGCCATACTTaGGCGCAGGGACATGCGAGG +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHPLCHT*AQGHAR
Trigger: CCTCGCATGTCCCTGCGCTCAAGTATGGCACAAAGG...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTAACAGTAAGTACAGGTaGTACAACATAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVNSKYR*YNISPA
Trigger: AGCTGGGCTTATGTTGTATCACCTGTACTTACTGTT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGCTTTCAGGACATTTTaGGAGATAGAACTCATAGAA +
Preference number: 4 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAAFRTF*EIELIE
Trigger: TTCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCATTGGGGCTCTGTGGCTaGCCTTGGGTATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSLGLCG*PWVCSS
Trigger: GGAGGAGCATACCCAAGGGCAGCCACAGAGCCCCAA...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPRLWRF*SSNALA
Trigger: AGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCATGGTGTCCGGCAATGTaGACAAGACATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPWCPAM*TRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCA...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGCCGTCTGCCCCTTCTaGAGTGGTGTCCGGCAATGT +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKAVCPF*SGVRQC
Trigger: ACATTGCCGGACACCACTGCAGAAGGGGCAGACGGC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: DLSDKTLSHGTGEEERERRTGRL*DQLCCS
Trigger: ACTACAACAAAGTTGATCGCACAGTCTACCAGTTCT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTRTGRL*DQLCCS
Trigger: ACTACAACAAAGTTGATCGCACAGTCTACCAGTTCT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCCTCTGCACTCTGGTTaGTCACAAGATCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGPLHSG*SQDHKD
Trigger: ATCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCGTTCCCTCAGGACCATaGTCCACCTCTGGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIVPSGP*STSGGE
Trigger: TTCTCCCCCAGAGGTGGACCATGGTCCTGAGGGAAC...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAGCCCCTGGATCAGGTaGCATCACCTCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFISPWIR*HHLRGL
Trigger: CAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCT...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTGCATTGGGGCTCTGTaGCTGCCCTTGGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHCIGAL*LPLGML
Trigger: GAGCATACCCAAGGGCAGCCACAGAGCCCCAATGCA...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGTCAGGCCATCTCCTaGCAACGAAGGATGTGCAGT +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPSQAIS*QRRMCS
Trigger: ACTGCACATCCTTCGTTGCCAGGAGATGGCCTGACT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFILPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAATGGAAGGAGCCTCCTaGACCAGTCTGTACCACAAC +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPMEGAS*TSLYHN
Trigger: GTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTTGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCGGCAGTGCTCACACTaGGATACCACACCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKRQCSH*DTTPRS
Trigger: GCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWTITGT*SYSPRC
Trigger: GCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATGTCCAAAGGATTCTTaGGGAAATCAGCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTCPKDS*GNQPPS
Trigger: ACTTGGAGGCTGATTTCCCCAAGAATCCTTTGGACA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTGTCCAAAGGATTCTTaGGGAAATCAGCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVCPKDS*GNQPPS
Trigger: ACTTGGAGGCTGATTTCCCCAAGAATCCTTTGGACA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTGTCCAAAGGATTCTTaGGGAAATCAGCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGCPKDS*GNQPPS
Trigger: ACTTGGAGGCTGATTTCCCCAAGAATCCTTTGGACA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGAGGAAGTCTACACTTaGGTTAATGTCCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: ITRAIITPSESGPSRKGFEEVYT*VNVQRI
Trigger: AATCCTTTGGACATTAACCCAAGTGTAGACTTCCTC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCGACTTGGGGCAGTCTaGGATTCCAGCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHRLGAV*DSSRSS
Trigger: AGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCG...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHPRCHC*PHEEPL
Trigger: GAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGG...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTTCCACTCTTCTGTCTaGCTTCCTTTGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQFHSSV*LPLDFI
Trigger: AATGAAGTCCAAAGGAAGTCAGACAGAAGAGTGGAA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTTCCACTCTTCTGTCTaGCTTCCTTTGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVFHSSV*LPLDFI
Trigger: AATGAAGTCCAAAGGAAGTCAGACAGAAGAGTGGAA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAAGCATTGACACCGTATaGATAGTTGAGACCAGTACA +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTSIDTV*IVETST
Trigger: TGTACTGGTCTCAACTATTCATACGGTGTCAATGCT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGAGTAGTAAAGGTCCGTaGAAATGTTCACCATCCGGT +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWSSKGP*KCSPSG
Trigger: ACCGGATGGTGAACATTTTCACGGACCTTTACTACT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTACTCAGAGACTTGTTaGGTTCTTGAACGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QSQAPAERVSINKMGYQVYSETC*VLERKS
Trigger: TGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFISSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTCTTCTGGCATATGCTaGAGCGAGTGGCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHSSGIC*SEWHRQ
Trigger: CTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGA...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGTTTTTCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTVFLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGAAAAAC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATTCTGGCAGTATAGATaGATAGGCACTGGCACAAAT +
Preference number: 4 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTFWQYR*IGTGTN
Trigger: ATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTTCTGGCAGTATAGATaGATAGGCACTGGCACAAAT +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQFWQYR*IGTGTN
Trigger: ATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGGTACACTTGCGAGACTaGCGTACCACATTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLLSGGIRVSELCALGKWVHLRD*RTTLVK
Trigger: TTTCACTAATGTGGTACGGCAGTCTCGCAAGTGTAC...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHSQGLL*QGQWVK
Trigger: TTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCT...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSLPLLQ*CPAMCT
Trigger: TGTGCACATTGCCGGACACCACTGCAGAAGGGGCAG...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTCACGGCAGCAGAACTaGAAGACCTGGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKSRQQN*KTWSCH
Trigger: GTGGCAGGACCAGGTCTTCCAGTTCTGCTGCCGTGA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTACTCAGAGACTTGTTaGGTTCTTGAACGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVYSETC*VLERKS
Trigger: TGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTACTCAGAGACTTGTTaGGTTCTTGAACGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQYSETC*VLERKS
Trigger: TGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTACTCAGAGACTTGTTaGGTTCTTGAACGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGYSETC*VLERKS
Trigger: TGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGCTTTCAGGACATTTTaGGAGATAGAACTCATAGAA +
Preference number: 4 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERAFRTF*EIELIE
Trigger: TTCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATTCTTAGTAAAATCTTaGTTGTACAGCAGTACACAG +
Preference number: 4 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRFLVKS*LYSSTQ
Trigger: CTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTCTTACAGTCCTCGCTaGAGAAGTCCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKSYSPR*RSPRCC
Trigger: GCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCCCCACCTTCTTGTATaGCCCCAAGCACGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIPHLLV*PQARCV
Trigger: AACACAACGTGCTTGGGGGCATACAAGAAGGTGGGG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFITSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCATGCTCTGAGAACTGTTaGTGCCATCCCCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSCSENC*CHPPES
Trigger: AGACTCTGGGGGATGGCATCAACAGTTCTCAGAGCA...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGACCCCAGGTTTGCTCTaGGAACTGTTGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKTPGLL*ELLMPS
Trigger: GGATGGCATCAACAGTTCTCAGAGCAAACCTGGGGT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAATCAGAATCCTCATCTaGCACTGGAATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPIRILI*HWNALS
Trigger: ACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGAT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPSSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCGAGAATATCCTCCTTaGTACGCATGGGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKREYPP*YAWVWG
Trigger: GCCCCAAACCCATGCGTATCAAGGAGGATATTCTCG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTGCTTTCAGGACATTTTaGGAGATAGAACTCATAGAA +
Preference number: 4 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFAFRTF*EIELIE
Trigger: TTCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGC...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAAGAAGCAAGAATCGCTaGAGAGTCGGTGTACCACGC +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSRSKNR*RVGVPR
Trigger: GCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCACCAAGCACGTTGTGTTaGAAAACCGCTTTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPPSTLC*KTAFVD
Trigger: GTCAACAAAAGCGGTTTTGCAACACAACGTGCTTGG...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAACCATGGTCCACCTCTaGGGGAGAAGGGGCTTTATA +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSTMVHL*GRRGFI
Trigger: TATAAAGCCCCTTCTCCCCCAGAGGTGGACCATGGT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCACAAAGTCCTCATCATTaGGGTCATCTACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPQSPHH*GHLPWH
Trigger: ATGCCATGGTAGATGACCCCAATGATGAGGACTTTG...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGATGTGCAGAACTCATaGAAGGAGCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKDVQNS*KEPPGP
Trigger: TGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGACCTCTCCAGTCTTCTaGCATATGCTGCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKTSPVF*HMLQRV
Trigger: CACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAAGGTACAGGTCTTTCTaGCCAAGGGCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSRYRSF*PRASWS
Trigger: ACTCCAAGAAGCCCTTGGGCAGAAAGACCTGTACCT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHRDRQM*RTHGRS
Trigger: GCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCT...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTTCTTAGTAAAATCTTaGTTGTACAGCAGTACACAG +
Preference number: 4 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGFLVKS*LYSSTQ
Trigger: CTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGTTCTTAGTAAAATCTTaGTTGTACAGCAGTACACAG +
Preference number: 4 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQFLVKS*LYSSTQ
Trigger: CTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAA...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR TCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAGTAGTGAGACAAGATaGAGAACAGAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFISSETR*RTEELR
Trigger: CCTCAGCTCTTCTGTTCTTCATCTTGTCTCACTACT...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSSLYHN*VLGVPD
Trigger: ATCTGGAACACCAAGGACTCAGTTGTGGTACAGACT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTTGGACTCAGAAGACTaGCTGTTCAGGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKLDSED*LFRRLS
Trigger: AGAAAGCCTCCTGAACAGTCAGTCTTCTGAGTCCAA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTCCAGATCTCCTTCTTaGAGAAGGTACAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHSRSPS*RRYRSF
Trigger: GAAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGA...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTCTTACACAGGGTCTTaGACCAGACACATGGGTACA +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKSYTGS*TRHMGT
Trigger: TGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGTACACAGCCTTCACTaGAGAAGCTTTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKVHSLH*RSFSLP
Trigger: GGGTAGAGAAAAGCTTCTGCAGTGAAGGCTGTGTAC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTGGGGTCATCTACCATaGCATCAGAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKWGHLP*HQNPHL
Trigger: CAGATGAGGATTCTGATGCCATGGTAGATGACCCCA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFITGHNS*FSVPCW
Trigger: CCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCTGTCTGACTTCCTTTaGACTTCATTTCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKLSDFL*TSFPPC
Trigger: GCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAAGACTCCAGGATTATTaGAGAATCTGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSRLQDY*RIWSQR
Trigger: CCTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CCA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCATTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSFSVPC*LGIWRS
Trigger: GCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAA...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCATCTCCTCTTCAATATaGGGAGACTCCAGGATTATT +
Preference number: 4 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIISSSI*GDSRII
Trigger: AATAATCCTGGAGTCTCCTCATATTGAAGAGGAGAT...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR TCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGAACAGTAAGTACAGGTaGTACAACATAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKNSKYR*YNISPA
Trigger: AGCTGGGCTTATGTTGTATCACCTGTACTTACTGTT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGAGGAAGTCTACACTTaGGTTAATGTCCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKEEVYT*VNVQRI
Trigger: AATCCTTTGGACATTAACCCAAGTGTAGACTTCCTC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR GCA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTTCTTAGTAAAATCTTaGTTGTACAGCAGTACACAG +
Preference number: 4 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKFLVKS*LYSSTQ
Trigger: CTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 90 bp CTGTGTCTCGCCCTTTCCTCTGTCGGACTGGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGCCCCGAGGCGTGGTACACTTGCGAG +
Preference number: 5 (lower is better)
Translates to: LCLALSSVGLGHSSG*SPPWWCPEAWYTCE
Trigger: CTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAAGGGCGAGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp TCCTCTGTCGGACTGGGGCATAGTAGCGGATGCTCACCACCTTGGTaGTGCCCCGAGGCGTGGTACACTTGCGAGACTGCCGTACCACAT +
Preference number: 5 (lower is better)
Translates to: SSVGLGHSSGCSPPW*CPEAWYTCETAVPH
Trigger: ATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGACAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp CTTTCCTCTGTCGGACTGGGGCATAGTAGCGGATGCTCACCACCTTaGTGGTGCCCCGAGGCGTGGTACACTTGCGAGACTGCCGTACCA +
Preference number: 5 (lower is better)
Translates to: LSSVGLGHSSGCSPP*WCPEAWYTCETAVP
Trigger: TGGTACGGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACGGATGCTCACCACCTaGGTGGTGCCCCGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRMLTT*VVPRGV
Trigger: CACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 90 bp CCTGCCGGCAGTGCTCACACTGGGATACCACACCCCGAAGCCGCTTaGAGTCCTCACAGCAATCACGGCAGCAGAACTGGAAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: PAGSAHTGIPHPEAA*SPHSNHGSRTGRPG
Trigger: ACCAGGTCTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCGGATGCTCACCACCTaGGTGGTGCCCCGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRMLTT*VVPRGV
Trigger: CACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp GGCTCCAGAGGATGGAGACGGACCTGGGGGAGCCCATCCTCGACTTaGGGCAGTCTGAGATTCCAGCAGATCCTCTCCAAATTCCATGTC +
Preference number: 5 (lower is better)
Translates to: GSRGWRRTWGSPSST*GSLRFQQILSKFHV
Trigger: GACATGGAATTTGGAGAGGATCTGCTGGAATCTCAGACTGCCCCAAGTCGAGGATGGGCTCCCCCAGGTCCGTCTCCATCCTCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 90 bp CCTCATGAAGAACCTCTCCAGTCTTCTGGCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAGACTGGGGGATTGGACGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PHEEPLQSSGICCSE*HRQDPQTGGLDAAA
Trigger: AGCAGCAGCGTCCAATCCCCCAGTCTGGGGATCCTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGTTCTTCATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS GCA 90 bp CCACTGAATCGAAGCTTCTCGTGCAGGAGCTTTTCCTGCCGGCAGTaGTCACACTGGGATACCACACCCCGAAGCCGCTTGAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PLNRSFSCRSFSCRQ*SHWDTTPRSRLKSS
Trigger: TGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCACGAGAAGCTTCGATTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp CGAAGCTTCTCGTGCAGGAGCTTTTCCTGCCGGCAGTGCTCACACTaGGATACCACACCCCGAAGCCGCTTGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: RSFSCRSFSCRQCSH*DTTPRSRLKSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCACGAGAAGCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCATCACCTCAGGGGTTaGACACCCTGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPHHLRG*TPWSRL
Trigger: GAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATG...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCCAGGACCTGTGTTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRPGPVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAACACAGGTCCTGG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATTCCCAGGACCTGTGTaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIFPGPV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAACACAGGTCCTGGGAA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS GCA 90 bp TCTCCTGCTCTCAGTGGAGTCCACAACCTCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCTTCTCTTCTGTACCCTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SPALSGVHNLRLWRF*SSNALASLLYPLRR
Trigger: CCGCCTGAGAGGGTACAGAAGAGAAGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCTGAGGTTGTGGACTCCACTGAGAGCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS CCA 90 bp TACAGGCATGGCACCGGGCAGCCTTGCAGTACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGCAGAAGTCCCAGGTGCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: YRHGTGQPCSTITGT*SYSPRCRSPRCCHP
Trigger: TGGATGGCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTACTGCAAGGCTGCCCGGTGCCATGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACTAGTATGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILVCWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCATACTAG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCGGATGCTCACCACCTaGGTGGTGCCCCGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGRMLTT*VVPRGV
Trigger: CACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 90 bp TGGAATGCTCTCAGTGGAGTCCACAACCTCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCTTCTCTTCTGTACCCTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WNALSGVHNLRLWRF*SSNALASLLYPLRR
Trigger: CCGCCTGAGAGGGTACAGAAGAGAAGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000134005.2
CDS GCA 90 bp GCTGGAACTTGGTCCAGCAGCTGGGGCTGCAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGTAACAAGGGTCAGAGAGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: AGTWSSSWGCRTGRL*DQLCCSNKGQRGCG
Trigger: GCCGCAGCCTCTCTGACCCTTGTTACTACAACAAAGTTGATCGCACAGTCTACCAGTTCTGCAGCCCCAGCTGCTGGACCAAGTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 90 bp CTCACCACCTTGGTGGTGCCCCGAGGCGTGGTACACTTGCGAGACTaGCGTACCACATTAGTGAAAGAGAGTTGCATGTGTTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LTTLVVPRGVVHLRD*RTTLVKESCMCSSA
Trigger: AGCTGAGGAACACATGCAACTCTCTTTCACTAATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 90 bp TGGAATGCTCTCAGTGGAGTCCACAACCTCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCTTCTCTTCCTCTCAGGCGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: WNALSGVHNLRLWRF*SSNALASLPLRRLL
Trigger: GAGAAGCCGCCTGAGAGGAAGAGAAGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCTGAGGTTGTGGACTCCACTGAGAGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp GGCAGTCTGAGATTCCAGCAGATCCTCTCCAAATTCCATGTCTACTaGAAGGTCTCCAGCCAGGGGCTTCTCTGGCAGGGTCAATGGGTC +
Preference number: 5 (lower is better)
Translates to: GSLRFQQILSKFHVY*KVSSQGLLWQGQWV
Trigger: GACCCATTGACCCTGCCAGAGAAGCCCCTGGCTGGAGACCTTCCAGTAGACATGGAATTTGGAGAGGATCTGCTGGAATCTCAGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
ENSMUST00000134005.2
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTITSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACTCTGGGTATCCAAGTaGGGTTGGTTCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTLWVSK*GWFCWL
Trigger: CAGCCAGCAGAACCAACCCAACTTGGATACCCAGAG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATCAGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTISASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCTGA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACACGTAGCTCATCACCTTaGCTGGTCTCTCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRSSSP*LVSPLA
Trigger: CGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACG...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTCGGCCCCACCTTCTaGTATGCCCCCAAGCACGTT +
Preference number: 5 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPLGPTF*YAPKHV
Trigger: AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAG...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS TCA 90 bp GCAGAACTCATGGAAGGAGCCTCCTGGACCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGATCTCCTGCTCTCAGTGGAGTCCACA +
Preference number: 5 (lower is better)
Translates to: AELMEGASWTSLYHN*VLGVPDLLLSVEST
Trigger: TGTGGACTCCACTGAGAGCAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCATGAGTTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS GCA 90 bp TTGGACGCTGCTGCTGGGCCTCATAGAGAGAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGCCTCCTGGACCAGTCTGTACCACAA +
Preference number: 5 (lower is better)
Translates to: LDAAAGPHRERDRQM*RTHGRSLLDQSVPQ
Trigger: TTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCTCTCTCTATGAGGCCCAGCAGCAGCGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS GCA 90 bp GTGGAGGAGTGGGCACACTTGGAGTTGCTCTCTTCACAGGAGTCTTaGCCAAATTCCCATTCTCGTCTGGGGTCCTCACTGTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: VEEWAHLELLSSQES*PNSHSRLGSSLCGC
Trigger: ACAACCACACAGTGAGGACCCCAGACGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCACTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS GCA 90 bp GCTTCCACTCTTCTGTCTGACTTCCTTTGGACTTCATTTCCGCCTTaGAGGAGACACCCCGGTTCTGCATCAGCGGCTTACACATGGCAG +
Preference number: 5 (lower is better)
Translates to: ASTLLSDFLWTSFPP*RRHPGSASAAYTWQ
Trigger: CTGCCATGTGTAAGCCGCTGATGCAGAACCGGGGTGTCTCCTGCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAGAAGAGTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACTAGTATGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DLSDKTLSHGTGEEERERLVCWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCATACTAG...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGGCAGAAATGACGGATTaGCCCACGCCAGTGGATCGT +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERAEMTD*PTPVDR
Trigger: ACGATCCACTGGCGTGGGCAAATCCGTCATTTCTGC...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTACACATGGCAGCTTaGTTTTTGCGGGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYILHMAA*FLRGVA
Trigger: GGCAACACCCCGCAAAAACAAAGCTGCCATGTGTAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATCAGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPASASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCTGA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIKHQPL*TLPHGS
Trigger: AGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCGTAGCTCATCACCTTaGCTGGTCTCTCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRSSSP*LVSPLA
Trigger: CGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGCGAGAATATCCTCCTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAGGAGGATATTCTCGC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGCGGGAGAATACAGTATaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRENTV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAATACTGTATTCTCCCG...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAGAATAAACCCCCAGTaGCTTGCACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTRINPQ*LALPEV
Trigger: CACCTCTGGGAGTGCAAGCAACTGGGGGTTTATTCT...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACGCATGGGTTTGGCTTaGCTGGTCTCTCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRRMGLA*LVSPLA
Trigger: CGCCAATGGAGAGACCAGCAAAGCCAAACCCATGCG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTGATACGCATGGGTTaGGCTTTGCTGGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYILIRMG*ALLVSP
Trigger: TGGAGAGACCAGCAAAGCCAAACCCATGCGTATCAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS-3UTR CAA 90 bp ACCCCCTTCCATAGCCCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TPFHSPLMHYSLGPTFLYTTTES*VFQISC
Trigger: GCAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...ATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGGGCTATGGAAGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS GCA 90 bp GGGATAGGCATTGAGAAAGGCACCGGGACTTTCTGGCAGTATAGATaGATAGGCACTGGCACAAATATGGGCACTGGGATGGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: GIGIEKGTGTFWQYR*IGTGTNMGTGMGST
Trigger: TGTGCTGCCCATCCCAGTGCCCATATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCCTTTCTCAATGCCTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 90 bp ATCCCGAGCTGTCCCAAACAGGTCACAGTCTTCCAGAAGTCCCTCTaGACTCTGGTTGCTCACAAGATCACAAAGATCCGAGGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: IPSCPKQVTVFQKSL*TLVAHKITKIRGGL
Trigger: AAGGCCTCCTCGGATCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGGACTTCTGGAAGACTGTGACCTGTTTGGGACAGCTCGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp ACTGACTGTTCAGGAGGCTTTCTGGCCCACTCTGGGTATCCAAGTTaGGTTGGTTCTGCTGGCTGTAGAAACGCAGCAGACACTGTTGGT +
Preference number: 5 (lower is better)
Translates to: TDCSGGFLAHSGYPS*VGSAGCRNAADTVG
Trigger: ACCAACAGTGTCTGCTGCGTTTCTACAGCCAGCAGAACCAACCCAACTTGGATACCCAGAGTGGGCCAGAAAGCCTCCTGAACAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp TCCCATTCTCGTCTGGGGTCCTCACTGTGTGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGGGCTTGGACTCAGAAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: SHSRLGSSLCGCSPL*FERVSGAWTQKTDC
Trigger: ACAGTCAGTCTTCTGAGTCCAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAACAACCACACAGTGAGGACCCCAGACGAGAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCATCACCTCAGGGGTTaGACACCCTGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGHHLRG*TPWSRL
Trigger: GAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACATCACCTCAGGGGTTaGACACCCTGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTHHLRG*TPWSRL
Trigger: GAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATG...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKTSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFTSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PRPFRHLYLSPKNHTPFHTSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...ATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CCTCTAATGCACTACTCCCTCGGCCCCACCTTCTTGTATGCCCCCAAGCACGTTTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: PLMHYSLGPTFLYAPKHVLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAGGGAGTAGTGCATTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CAA 90 bp CCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: PSPRPFRHLYLSPKNHTPLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...GGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATACACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGCAGAAATGACGGATTaGCCCACGCCAGTGGATCGT +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFAEMTD*PTPVDR
Trigger: ACGATCCACTGGCGTGGGCAAATCCGTCATTTCTGC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGCAGAAATGACGGATTaGCCCACGCCAGTGGATCGT +
Preference number: 5 (lower is better)
Translates to: DLSDKTLSHGTGEEERERAEMTD*PTPVDR
Trigger: ACGATCCACTGGCGTGGGCAAATCCGTCATTTCTGC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCCTCTGGGTATCCAAGTaGGGTTGGTTCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFLWVSK*GWFCWL
Trigger: CAGCCAGCAGAACCAACCCAACTTGGATACCCAGAG...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATACTCTTCACAGGAGTCTaGCCCAAATTCCCATTCTCG +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILFTGV*PKFPFS
Trigger: CGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAG...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATTACACATGGCAGCTTaGTTTTTGCGGGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTLHMAA*FLRGVA
Trigger: GGCAACACCCCGCAAAAACAAAGCTGCCATGTGTAA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGGGCAGCACAATCACTaGTGGCTTCCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAGQHNH*WLPLFC
Trigger: ACAGAAGAGTGGAAGCCACAAGTGATTGTGCTGCCC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYISYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGGAGAATACAGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACTGTATTCTC...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 90 bp GCAGAACTCATGGAAGGAGCCTCCTGGACCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAGGT +
Preference number: 5 (lower is better)
Translates to: AELMEGASWTSLYHN*VLGVPDLLLAEGTG
Trigger: ACCTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCATGAGTTCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 90 bp GGGGCCGGAATGGCACAAAGTCCTCATCATTGGGGTCATCTACCATaGCATCAGAATCCTCATCTGACACTGGAATGCTCTCAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: GAGMAQSPHHWGHLP*HQNPHLTLECSQWS
Trigger: ACTCCACTGAGAGCATTCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
ENSMUST00000134005.2
CDS-3UTR CAA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGCATCACCTCAGGGGTTaGACACCCTGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SLLSGGIRVSELCALGKWHHLRG*TPWSRL
Trigger: GAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATG...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSITSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATATTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: SQPSTLQAPLFITQEPHPLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...GGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGGGAAAGAACTGGGTGCTCCCTCTGACAGACACTAACCTTTCTGGGCCCACATTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: QGKNWVLPLTDTNLSGPTLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...TGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAGCACCCAGTTCTTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCTAGTATGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGLVCWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCATACTAG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTCTAGTATGCTGGAACTaGGTCCAGCAGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFLVCWN*VQQLGL
Trigger: CAGCCCCAGCTGCTGGACCAAGTTCCAGCATACTAG...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCACCACGCTGGCAGGTTaGGGAACAGTAAGTACAGGT +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFTTLAG*GTVSTG
Trigger: ACCTGTACTTACTGTTCCCAAACCTGCCAGCGTGGT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACTCTGGGTATCCAAGTaGGGTTGGTTCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERLWVSK*GWFCWL
Trigger: CAGCCAGCAGAACCAACCCAACTTGGATACCCAGAG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: DLSDKTLSHGTGEEERERVLHFG*RGCLGL
Trigger: AAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATTACACATGGCAGCTTaGTTTTTGCGGGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPALHMAA*FLRGVA
Trigger: GGCAACACCCCGCAAAAACAAAGCTGCCATGTGTAA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTCAGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGSASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCTGA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAKHQPL*TLPHGS
Trigger: AGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACC +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTILLVSP*AYFDCT
Trigger: GGTACAGTCAAAATACGCCAATGGAGAGACCAGCAA...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGAGAATACAGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACTGTATTCTC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAACAGCTAAAATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYITAKMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGCGAGAATATCCTCCTaGATACGCATGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAARISS*IRMGLA
Trigger: AGCCAAACCCATGCGTATCAAGGAGGATATTCTCGC...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS CCA 90 bp ACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTGGCTCGGAATTTaGAGAAGCAAGAATCGCTGCAGAGTCGGTGTACCACGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: TGHNSWFSVPCWLGI*RSKNRCRVGVPRCH
Trigger: ATGGCAGCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 90 bp AGTTGCTCTCTTCACAGGAGTCTTGCCCAAATTCCCATTCTCGTCTaGGGTCCTCACTGTGTGGTTGTTCTCCACTTTGGTTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: SCSLHRSLAQIPILV*GPHCVVVLHFGLRG
Trigger: CCCTCTCAAACCAAAGTGGAGAACAACCACACAGTGAGGACCCCAGACGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAGAGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPATKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGACATCTTGGTGCCCATaGAAGAGCGCCCAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMTSWCP*KSAQPF
Trigger: AAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPALLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCACAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGTPRSR*KSSQQS
Trigger: TGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAACCACGCTGGCAGGTTaGGGAACAGTAAGTACAGGT +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERTTLAG*GTVSTG
Trigger: ACCTGTACTTACTGTTCCCAAACCTGCCAGCGTGGT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCATACCATAACAGGTACTaGGTCTTACAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KPTGSPELSSLHQSQAPAYHNRY*VLQSSL
Trigger: CAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTA...TGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGCAGAAATGACGGATTaGCCCACGCCAGTGGATCGT +
Preference number: 5 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQAEMTD*PTPVDR
Trigger: ACGATCCACTGGCGTGGGCAAATCCGTCATTTCTGC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAACGCAGCAGACACTGTaGGTTGCAGAAATGACGGAT +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRTQQTL*VAEMTD
Trigger: ATCCGTCATTTCTGCAACCAACAGTGTCTGCTGCGT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGACGCAGCAGACACTGTaGGTTGCAGAAATGACGGAT +
Preference number: 5 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKTQQTL*VAEMTD
Trigger: ATCCGTCATTTCTGCAACCAACAGTGTCTGCTGCGT...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCACGCAGCAGACACTGTaGGTTGCAGAAATGACGGAT +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFTQQTL*VAEMTD
Trigger: ATCCGTCATTTCTGCAACCAACAGTGTCTGCTGCGT...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACTCTGGGTATCCAAGTaGGGTTGGTTCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLWVSK*GWFCWL
Trigger: CAGCCAGCAGAACCAACCCAACTTGGATACCCAGAG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTGGGCAGCACAATCACTaGTGGCTTCCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVGQHNH*WLPLFC
Trigger: ACAGAAGAGTGGAAGCCACAAGTGATTGTGCTGCCC...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTTCAGCCTCCAAGGGGTaGGAAGGGATCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFSASKG*EGIFTF
Trigger: GAAGGTGAAGATCCCTTCCAACCCCTTGGAGGCTGA...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGACCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGA +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRPSALW*LTRSQR
Trigger: TCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTCCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGA +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTPSALW*LTRSQR
Trigger: TCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: DLSDKTLSHGTGEEERERKHQPL*TLPHGS
Trigger: AGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTT...TCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCGTAGCTCATCACCTTaGCTGGTCTCTCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGRSSSP*LVSPLA
Trigger: CGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGTCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERSYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAATACAGTATTGTaGGGGAGGAGTGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERENTVL*GRSVGC
Trigger: GCAGCCCACACTCCTCCCCAACAATACTGTATTCTC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTCGGGAGAATACAGTATaGTTGGGGAGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFRENTV*LGRSVG
Trigger: GCCCACACTCCTCCCCAACAATACTGTATTCTCCCG...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATAAAGAACATGAGGGTATaGAGGAGGACAAAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: HKGGHGSLKEQARHLSTIKNMRV*RRTKGE
Trigger: TTCTCCCTTTGTCCTCCTCAATACCCTCATGTTCTT...TATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GCAGCTGGGTTCTTCCCTAGGTCACACCTAGGGCCACAGGGCTTCACCTACATAATTAGTGAAAGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AAGFFPRSHLGPQGFTYIISERE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCTTTCACTAAT...TATGTAGGTGAAGCCCTGTGGCCCTAGGTGTGACCTAGGGAAGAACCCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 90 bp TTGGAGTTGCTCTCTTCACAGGAGTTGTGTGGTTGTTCTCCACTTTaGTTTGAGAGGGTGTCTGGGGCTTGGACTCAGAAGACTGACTGT +
Preference number: 5 (lower is better)
Translates to: LELLSSQELCGCSPL*FERVSGAWTQKTDC
Trigger: ACAGTCAGTCTTCTGAGTCCAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAACAACCACACAACTCCTGTGAAGAGAGCAACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS-3UTR CAA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CAACAGTTTCTCACTACAACACAAGGGTGGGCATGGCTCACTGAAGGAACAGGCGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: QQFLTTTQGWAWLTEGTGETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: RPFRHLYLSPKNHTPFHSTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...GCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTTTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PSGTFIYHPRTTPPSIALLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...GAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGATTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCACCACGCTGGCAGGTTaGGGAACAGTAAGTACAGGT +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVTTLAG*GTVSTG
Trigger: ACCTGTACTTACTGTTCCCAAACCTGCCAGCGTGGT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGACCACGCTGGCAGGTTaGGGAACAGTAAGTACAGGT +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGTTLAG*GTVSTG
Trigger: ACCTGTACTTACTGTTCCCAAACCTGCCAGCGTGGT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTVLHFG*RGCLGL
Trigger: AAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAAC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGCTCTTCACAGGAGTCTaGCCCAAATTCCCATTCTCG +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGLFTGV*PKFPFS
Trigger: CGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAG...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCGGGCAGCACAATCACTaGTGGCTTCCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVGQHNH*WLPLFC
Trigger: ACAGAAGAGTGGAAGCCACAAGTGATTGTGCTGCCC...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACCCTCTGCACTCTGGTaGCTCACAAGATCACAAAGA +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERPSALW*LTRSQR
Trigger: TCTTTGTGATCTTGTGAGCAACCAGAGTGCAGAGGG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCCCCTCACTTTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGTTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACC +
Preference number: 5 (lower is better)
Translates to: SPHFQTSQTRPFHMVQGKLLVSP*AYFDCT
Trigger: GGTACAGTCAAAATACGCCAATGGAGAGACCAGCAA...CTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGCGAGAATATCCTCCTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAGGAGGATATTCTCGC...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGCGAGAATATCCTCCTaGATACGCATGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQARISS*IRMGLG
Trigger: CCCCAAACCCATGCGTATCAAGGAGGATATTCTCGC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAGAATAAACCCCCAGTaGCTTGCACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVRINPQ*LALPEV
Trigger: CACCTCTGGGAGTGCAAGCAACTGGGGGTTTATTCT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAAGAACATGAGGGTATaGAGGAGGACAAAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERKNMRV*RRTKGE
Trigger: TTCTCCCTTTGTCCTCCTCAATACCCTCATGTTCTT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGACAGCTAAAATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRTAKMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMTTTES*VFQISC
Trigger: GCAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CAA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCACTCGGCCCCACCTTCTaGTATGCCCCCAAGCACGTT +
Preference number: 5 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPLGPTF*YAPKHV
Trigger: AACGTGCTTGGGGGCATACAAGAAGGTGGGGCCGAG...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS GCA 90 bp GGGTTAATGTCCAAAGGATTCTTGGGGAAATCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACATTAGCCATCTTAACAGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: GLMSKGFLGKSASKS*PGSSKTLAILTAMA
Trigger: GGCCATGGCTGTTAAGATGGCTAATGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGATTTCCCCAAGAATCCTTTGGACATTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATACACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: PFRHLYLSPKNHTPFHSPAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...AGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGATACCATAACAGGTACTaGGTCTTACAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERYHNRY*VLQSSL
Trigger: CAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTA...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTACCATAACAGGTACTaGGTCTTACAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGYHNRY*VLQSSL
Trigger: CAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACTCTTCACAGGAGTCTaGCCCAAATTCCCATTCTCG +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLFTGV*PKFPFS
Trigger: CGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVKHQPL*TLPHGS
Trigger: AGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAGTCAGGCCCCAGCAGAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTTTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACC +
Preference number: 5 (lower is better)
Translates to: QSQAPAERVSINKMGYQVLLVSP*AYFDCT
Trigger: GGTACAGTCAAAATACGCCAATGGAGAGACCAGCAA...AACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTCTGCTGGGGCCTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGAGAATAAACCCCCAGTaGCTTGCACTCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLSGGIRVSELCALGKWRINPQ*LALPEV
Trigger: CACCTCTGGGAGTGCAAGCAACTGGGGGTTTATTCT...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAAAGAACATGAGGGTATaGAGGAGGACAAAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRKNMRV*RRTKGE
Trigger: TTCTCCCTTTGTCCTCCTCAATACCCTCATGTTCTT...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTCAGACCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGACTCTCTTCACAGGAGTaGTGTGGTTGTTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: FRPLRQDPFTWYRGRGERLSSQE*CGCSPL
Trigger: AAGTGGAGAACAACCACACAACTCCTGTGAAGAGAG...TCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS-3UTR CAA 90 bp CTTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCCATCACCTCAGGGGTTaGACACCCTGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LYLFYFSQPSTLQAPLFIHHLRG*TPWSRL
Trigger: GAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATG...GATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGGAGACTCCAGGATTATaGGAGAATCTGGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQETPGL*ENLEPK
Trigger: CTTTGGCTCCAGATTCTCCAATAATCCTGGAGTCTC...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGACAAAGTCCTCATCATaGGGGTCATCTACCATGGCA +
Preference number: 5 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQTKSSS*GSSTMA
Trigger: TGCCATGGTAGATGACCCCAATGATGAGGACTTTGT...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATATTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LDPSGTFIYHPRTTPPSIFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...TATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACATTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGTTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACACACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AGGCACCTTTATTTATCACCCAAGAACCACACCCCCTTCCATAGCCCTCTAATGCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RHLYLSPKNHTPFHSPLMHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...CATTAGAGGGCTATGGAAGGGGGTGTGGTTCTTGGGTGATAAATAAAGGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp GGCTTCACCTACATAGATGTAGGTCAGAAAACGCAAAGCCAACAGGATCACCAGCAGAACAAGCTGGTCTaGCCATTACGATCCACATGT +
Preference number: 5 (lower is better)
Translates to: GFTYIDVGQKTQSQQDHQQNKLV*PLRSTC
Trigger: ACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTG...CTGGTGATCCTGTTGGCTTTGCGTTTTCTGACCTACATCTATGTAGGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTACCATAACAGGTACTaGGTCTTACAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVYHNRY*VLQSSL
Trigger: CAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGTTACACATGGCAGCTTaGTTTTTGCGGGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: SLLSGGIRVSELCALGKWLHMAA*FLRGVA
Trigger: GGCAACACCCCGCAAAAACAAAGCTGCCATGTGTAA...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCTTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACC +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVLLVSP*AYFDCT
Trigger: GGTACAGTCAAAATACGCCAATGGAGAGACCAGCAA...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGTCATATCGTTCACCATaGGGCCGAGTGATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGSYRSP*GRVISL
Trigger: GAGAGAAATCACTCGGCCCAATGGTGAACGATATGA...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGACAGCTAAAATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGTAKMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGT...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 90 bp GACGACCAAGTTCCTCATAAATCTCACGCACAGCTAAAATGCGATTaGGCATGCTCTCCAACATGCTTCGGTCCATGGGAATCACAGAAT +
Preference number: 5 (lower is better)
Translates to: DDQVPHKSHAQLKCD*ACSPTCFGPWESQN
Trigger: ATTCTGTGATTCCCATGGACCGAAGCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGTGCGTGAGATTTATGAGGAACTTGGTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAAGAACCACATTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: FFPALDPSGTFIYHPRTTFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...TGTGGTTCTTGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp TTGTGTTGCAAAACCGCTTTTGTTGACCATCATGAAACAGGAGCTCTGGGCCAATTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: LCCKTAFVDHHETGALGQLLARN*EKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAA...TTGGCCCAGAGCTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGCAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCCACAGCTCCTCACCTATCTTTTGACCACAAACCCCATCCTAGATGGCCTAGGAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PTAPHLSFDHKPHPRWPRRLVEF*NESQVV
Trigger: TACTACTTGACTTTCGTTCAAGAACTCAACAAGTCT...CCTAGGCCATCTAGGATGGGGTTTGTGGTCAAAAGATAGGTGAGGAGCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CCTCTCAGACAAGACCCTTTCACATGGTACAGGGGAAGAGGAGAGAGAGAGAGGAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PLRQDPFTWYRGRGERERRLVEF*NESQVV
Trigger: TACTACTTGACTTTCGTTCAAGAACTCAACAAGTCT...CCTCTCTCTCTCTCCTCTTCCCCTGTACCATGTGAAAGGGTCTTGTCTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCGGCTTTCAGGACATTTaGAGAGATAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFGFQDI*RDRTHR
Trigger: TCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGCC...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CTCCCTCTGACAGACACTAACCTTTCTGGGCCCACAAAGGTAAGATGGGGAAGAGGCTTTCAGGACATTTaGAGAGATAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: LPLTDTNLSGPTKVRWGRGFQDI*RDRTHR
Trigger: TCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGCC...TCTTCCCCATCTTACCTTTGTGGGCCCAGAAAGGTTAGTGTCTGTCAGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAGACACTGGCTTTCAGGACATTTaGAGAGATAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: RSQLGPFRMDSIGSRTDTGFQDI*RDRTHR
Trigger: TCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGCC...AGTGTCTGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCACAGCTAAAATGCGATaGAGCATGCTCTCCAACATG +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVTAKMR*SMLSNM
Trigger: CATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGT...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCAACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp TCACTTCTCTCAGGAGGGATAAGAGTGTCTGAGCTCTGTGCTTTAGGTAAATGGGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: SLLSGGIRVSELCALGKWAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...CCATTTACCTAAAGCACAGAGCTCAGACACTCTTATCCCTCCTGAGAGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp ATCACCAGAGCTATCATCACTCCATCAGAGTCAGGCCCCAGCAGAAAGGGTTTCCTTCTTAGTAAAATCTaGCTTGTACAGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: ITRAIITPSESGPSRKGFLLSKI*LVQQYT
Trigger: TGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAG...GAAACCCTTTCTGCTGGGGCCTGACTCTGATGGAGTGATGATAGCTCTGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTATTAGTGAAAGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFISERE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCTTTCACTAAT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GAAAGGGTTTCCATAAACAAAATGGGCTACCAGGTTCACACCCATCACTGGGGGGGCTTTCAGGACATTTaGAGAGATAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: ERVSINKMGYQVHTHHWGGFQDI*RDRTHR
Trigger: TCTATGAGTTCTATCTCTCAAAATGTCCTGAAAGCC...CCCCCAGTGATGGGTGTGAACCTGGTAGCCCATTTTGTTTATGGAAACCCTTTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACCCATTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: FVLFFPALDPSGTFIYHPLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...TGGGTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS GCA 90 bp TACGATCCACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTTaGACCAGACACATGGGTACACACGTGTGTTTTTCTTCTTGTATG +
Preference number: 5 (lower is better)
Translates to: YDPHVIASQSSYTGS*TRHMGTHVCFSSCM
Trigger: CATACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGTGGATCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHTTTES*VFQISF
Trigger: GAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGT...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp GTACACTGGGGGCCCATGATTATCAAGTGGTATGAAAGAAGGTTAAAGGCAGGGCTTCTTAGTAAAATCTaGCTTGTACAGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: VHWGPMIIKWYERRLKAGLLSKI*LVQQYT
Trigger: TGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAG...CCCTGCCTTTAACCTTCTTTCATACCACTTGATAATCATGGGCCCCCAGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACACTTCTTAGTAAAATCTaGCTTGTACAGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTLLSKI*LVQQYT
Trigger: TGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAG...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp CAGAAAACGCAAAGCCAACAGGATCACCAGAGCTATCATCACTCCATCAGAGTCCTTCTTAGTAAAATCTaGCTTGTACAGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: QKTQSQQDHQSYHHSIRVLLSKI*LVQQYT
Trigger: TGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAG...GACTCTGATGGAGTGATGATAGCTCTGGTGATCCTGTTGGCTTTGCGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AATAGAAGGAGCCAGTTAGGGCCCTTCAGAATGGATAGCATTGGTTCCAGGACAAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: NRRSQLGPFRMDSIGSRTRLVEF*NESQVV
Trigger: TACTACTTGACTTTCGTTCAAGAACTCAACAAGTCT...TGTCCTGGAACCAATGCTATCCATTCTGAAGGGCCCTAACTGGCTCCTTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp GGGCATGGCTCACTGAAGGAACAGGCCAGGCACCTCAGTACAATATATACATTTAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: GHGSLKEQARHLSTIYTFRLVEF*NESQVV
Trigger: TACTACTTGACTTTCGTTCAAGAACTCAACAAGTCT...AAATGTATATATTGTACTGAGGTGCCTGGCCTGTTCCTTCAGTGAGCCATGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHVFSPL*ARNLEK
Trigger: CTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAAC...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAATGCCCCCAAGCACGTaGTGTTGCAAAACCGCTTTT +
Preference number: 5 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSMPPST*CCKTAF
Trigger: AAAAGCGGTTTTGCAACACAACGTGCTTGGGGGCAT...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTTCTTACACAGGGTCTaGCACCAGACACATGGGTAC +
Preference number: 5 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKFLHRV*HQTHGY
Trigger: GTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCACTTCCAGATCTCCTTCTaGCAGAAGGTACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LFVLFFPALDPSGTFIYHFQISF*QKVQVF
Trigger: AAAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAA...GTGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGTTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKLVFSP*LARNLE
Trigger: CTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAA...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGCACTGGTCACAACAGTaGGTTTTCAGTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKHWSQQ*VFSPLL
Trigger: CAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp TTTATTTGTTTTATTTTTCCCAGCCCTCGACCCTTCAGGCACCTTTATTTATCAGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: FICFIFPSPRPFRHLYLSAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...TGATAAATAAAGGTGCCTGAAGGGTCGAGGGCTGGGAAAAATAAAACAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120201.8
ENSMUST00000121429.8
CDS-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGGCAAAACCGCTTTTGTaGACCATCATGAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKAKPLL*TIMKQE
Trigger: CTCCTGTTTCATGATGGTCAACAAAAGCGGTTTTGC...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS-3UTR CAA 90 bp AAACAATTCCAGAGACAAGTTAGTTGTGACAACAGTTTCTCACTACAACACAAGATTAGTGAAAGAGAGTaGCATGTGTTCCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: KQFQRQVSCDNSFSLQHKISERE*HVFLSC
Trigger: ACAGCTGAGGAACACATGCAACTCTCTTTCACTAAT...CTTGTGTTGTAGTGAGAAACTGTTGTCACAACTAACTTGTCTCTGGAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 72 bp CCAGCCCCTGGATCAGGTGGCATCACCTCAGGGGTTTaGCACCCTGGTCCAGGCTCTAGGGTCTGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: PAPGSGGITSGV*HPGPGSRVCSP
Trigger: GGGGGAGCAGACCCTAGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATGCCACCTGATCCAGGGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp TGCCCACGCCAGTGGATCGTTTCCAGCAGCTTCCCCTaGCGCTTACAGGCATGGCACCGGGCAGCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: CPRQWIVSSSFP*RLQAWHRAALQ
Trigger: CTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGAAACGATCCACTGGCGTGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp GCCCTTTCCTCTGTCGGACTGGGGCATAGTAGCGGATaGTCACCACCTTGGTGGTGCCCCGAGGCGTGGTAC +
Preference number: 6 (lower is better)
Translates to: ALSSVGLGHSSG*SPPWWCPEAWY
Trigger: GTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp GGACTGGGGCATAGTAGCGGATGCTCACCACCTTGGTaGTGCCCCGAGGCGTGGTACACTTGCGAGACTGCC +
Preference number: 6 (lower is better)
Translates to: GLGHSSGCSPPW*CPEAWYTCETA
Trigger: GGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp CTGGGGCATAGTAGCGGATGCTCACCACCTTGGTGGTaGCCCGAGGCGTGGTACACTTGCGAGACTGCCGTA +
Preference number: 6 (lower is better)
Translates to: LGHSSGCSPPWW*PEAWYTCETAV
Trigger: TACGGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp GTCGGACTGGGGCATAGTAGCGGATGCTCACCACCTTaGTGGTGCCCCGAGGCGTGGTACACTTGCGAGACT +
Preference number: 6 (lower is better)
Translates to: VGLGHSSGCSPP*WCPEAWYTCET
Trigger: AGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp CGAAGCTTCTCGTGCAGGAGCTTTTCCTGCCGGCAGTaGTCACACTGGGATACCACACCCCGAAGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: RSFSCRSFSCRQ*SHWDTTPRSRL
Trigger: CAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCACGAGAAGCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp GCGCAGGGACATGCGAGGAGAGCGCCGGGGCCGGAATaGCACAAAGTCCTCATCATTGGGGTCATCTACCAT +
Preference number: 6 (lower is better)
Translates to: AQGHARRAPGPE*HKVLIIGVIYH
Trigger: ATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTCTCCTCGCATGTCCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp CCCCTTGCGCTGATAGGCCGTCTGCCCCTTCTGCAGTaGTGTCCGGCAATGTGCACAAGACATCTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: PLALIGRLPLLQ*CPAMCTRHLGA
Trigger: GGCACCAAGATGTCTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGACGGCCTATCAGCGCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp CCCAGGACCTGTGTCTCGCCCTTTCCTCTGTCGGACTaGGGCATAGTAGCGGATGCTCACCACCTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: PRTCVSPFPLSD*GIVADAHHLGG
Trigger: ACCACCAAGGTGGTGAGCATCCGCTACTATGCCCCAGTCCGACAGAGGAAAGGGCGAGACACAGGTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp TCCTGCCGGCAGTGCTCACACTGGGATACCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCACGGCAGCAGAACTGGAAGACCTGG +
Preference number: 6 (lower is better)
Translates to: SCRQCSHWDTTPRSR*KSSQQSRQQNWKTW
Trigger: CCAGGTCTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp GAACCTCTCCAGTCTTCTGGCATATGCTGCAGCGAGTaGCATCGGCAGGATCCCCAGACTGGGGGATTGGAC +
Preference number: 6 (lower is better)
Translates to: EPLQSSGICCSE*HRQDPQTGGLD
Trigger: GTCCAATCCCCCAGTCTGGGGATCCTGCCGATGCCACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp TCGTGCAGGAGCTTTTCCTGCCGGCAGTGCTCACACTaGGATACCACACCCCGAAGCCGCTTGAAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SCRSFSCRQCSH*DTTPRSRLKSS
Trigger: TGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GGGGCGGTGGGGGTGGAGGAGTGGGCACACTTGGAGTaGCTCTCTTCACAGGAGTTGTGTGGTTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: GAVGVEEWAHLE*LSSQELCGCSP
Trigger: TGGAGAACAACCACACAACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCACTCCTCCACCCCCACCGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS CAA 90 bp ATATGCTGCAGCGAGTGGCATCGGCAGGATCCCCAGACTGGGGGATaGGACGCTGCTGCTGGGCCTCATAGAGAGAGAGACAGACAGATG +
Preference number: 6 (lower is better)
Translates to: ICCSEWHRQDPQTGG*DAAAGPHRERDRQM
Trigger: CATCTGTCTGTCTCTCTCTCTATGAGGCCCAGCAGCAGCGTCCAATCCCCCAGTCTGGGGATCCTGCCGATGCCACTCGCTGCAGCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS GCA 72 bp CCACTGAATCGAAGCTTCTCGTGCAGGAGCTTTTCCTaGCGGCAGTGCTCACACTGGGATACCACACCCCGA +
Preference number: 6 (lower is better)
Translates to: PLNRSFSCRSFS*RQCSHWDTTPR
Trigger: TCGGGGTGTGGTATCCCAGTGTGAGCACTGCCGGCAGGAAAAGCTCCTGCACGAGAAGCTTCGATTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp CGCTTGAAGTCCTCACAGCAATCACGGCAGCAGAACTaGAAGACCTGGTCCTGCCACTCCAAGACCTCAGGC +
Preference number: 6 (lower is better)
Translates to: RLKSSQQSRQQN*KTWSCHSKTSG
Trigger: GCCTGAGGTCTTGGAGTGGCAGGACCAGGTCTTCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp GGCACCGGGCAGCCTTGCAGTACCATAACAGGTACTTaGTCTTACAGTCCTCGCTGCAGAAGTCCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: GTGQPCSTITGT*SYSPRCRSPRC
Trigger: GCACCTGGGACTTCTGCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTACTGCAAGGCTGCCCGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp ATCGTTTCCAGCAGCTTCCCCTGGCGCTTACAGGCATaGCACCGGGCAGCCTTGCAGTACCATAACAGGTAC +
Preference number: 6 (lower is better)
Translates to: IVSSSFPWRLQA*HRAALQYHNRY
Trigger: GTACCTGTTATGGTACTGCAAGGCTGCCCGGTGCCATGCCTGTAAGCGCCAGGGGAAGCTGCTGGAAACGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp CAGTGCTCACACTGGGATACCACACCCCGAAGCCGCTaGAAGTCCTCACAGCAATCACGGCAGCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: QCSHWDTTPRSR*KSSQQSRQQNW
Trigger: CCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp TTACAGGCATGGCACCGGGCAGCCTTGCAGTACCATAACAGGTACTaGGTCTTACAGTCCTCGCTGCAGAAGTCCCAGGTGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: LQAWHRAALQYHNRY*VLQSSLQKSQVLPS
Trigger: GGATGGCAGCACCTGGGACTTCTGCAGCGAGGACTGTAAGACCAAGTACCTGTTATGGTACTGCAAGGCTGCCCGGTGCCATGCCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 72 bp AGTGCTCACACTGGGATACCACACCCCGAAGCCGCTTaGAGTCCTCACAGCAATCACGGCAGCAGAACTGGA +
Preference number: 6 (lower is better)
Translates to: SAHTGIPHPEAA*SPHSNHGSRTG
Trigger: TCCAGTTCTGCTGCCGTGATTGCTGTGAGGACTTCAAGCGGCTTCGGGGTGTGGTATCCCAGTGTGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp TTCTGCAGTGGTGTCCGGCAATGTGCACAAGACATCTaGGTGCCCATTGAAGAGCGCCCAGCCCTTTGTGCC +
Preference number: 6 (lower is better)
Translates to: FCSGVRQCAQDI*VPIEERPALCA
Trigger: GGCACAAAGGGCTGGGCGCTCTTCAATGGGCACCAAGATGTCTTGTGCACATTGCCGGACACCACTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp CTCACCACCTTGGTGGTGCCCCGAGGCGTGGTACACTaGCGAGACTGCCGTACCACATTAGTGAAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: LTTLVVPRGVVH*RDCRTTLVKES
Trigger: ACTCTCTTTCACTAATGTGGTACGGCAGTCTCGCAAGTGTACCACGCCTCGGGGCACCACCAAGGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp ATGCGAGGAGAGCGCCGGGGCCGGAATGGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCATCAGAATCCTCATCTGACACTGGA +
Preference number: 6 (lower is better)
Translates to: MRGERRGRNGTKSSS*GSSTMASESSSDTG
Trigger: TCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTCTCCTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 90 bp GGTGGAGGAGTGGGCACACTTGGAGTTGCTCTCTTCACAGGAGTCTaGCCCAAATTCCCATTCTCGTCTGGGGTCCTCACTGTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: GGGVGTLGVALFTGV*PKFPFSSGVLTVWL
Trigger: CAACCACACAGTGAGGACCCCAGACGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCACTCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS CAA 90 bp GGGGTGGAGGAGTGGGCACACTTGGAGTTGCTCTCTTCACAGGAGTaGTGTGGTTGTTCTCCACTTTGGTTTGAGAGGGTGTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: GVEEWAHLELLSSQE*CGCSPLWFERVSGA
Trigger: AGCCCCAGACACCCTCTCAAACCAAAGTGGAGAACAACCACACAACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCACTCCTCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS GCA 72 bp GCTGCTGGGCCTCATAGAGAGAGAGACAGACAGATGTaGAGAACTCATGGAAGGAGCCTCCTGGACCAGTCT +
Preference number: 6 (lower is better)
Translates to: AAGPHRERDRQM*RTHGRSLLDQS
Trigger: AGACTGGTCCAGGAGGCTCCTTCCATGAGTTCTGCACATCTGTCTGTCTCTCTCTCTATGAGGCCCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS GCA 72 bp CTCAGTGGAGTCCACAACCTCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCTTCTCTTCCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: LSGVHNLRLWRF*SSNALASLPLR
Trigger: CCTGAGAGGAAGAGAAGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCTGAGGTTGTGGACTCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp CATGTCTACTGGAAGGTCTCCAGCCAGGGGCTTCTCTaGCAGGGTCAATGGGTCAAATGGACTGGGGAAATC +
Preference number: 6 (lower is better)
Translates to: HVYWKVSSQGLL*QGQWVKWTGEI
Trigger: GATTTCCCCAGTCCATTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCTGGAGACCTTCCAGTAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
ENSMUST00000134005.2
CDS CAA 72 bp GAGCGCCGGGGCCGGAATGGCACAAAGTCCTCATCATaGGGGTCATCTACCATGGCATCAGAATCCTCATCT +
Preference number: 6 (lower is better)
Translates to: ERRGRNGTKSSS*GSSTMASESSS
Trigger: AGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCATTCCGGCCCCGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp ACGCAGCAGACACTGTTGGTTGCAGAAATGACGGATTaGCCCACGCCAGTGGATCGTTTCCAGCAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: TQQTLLVAEMTD*PTPVDRFQQLP
Trigger: GGGAAGCTGCTGGAAACGATCCACTGGCGTGGGCAAATCCGTCATTTCTGCAACCAACAGTGTCTGCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GAGGCTTTCTGGCCCACTCTGGGTATCCAAGTTGGGTaGGTTCTGCTGGCTGTAGAAACGCAGCAGACACTG +
Preference number: 6 (lower is better)
Translates to: EAFWPTLGIQVG*VLLAVETQQTL
Trigger: CAGTGTCTGCTGCGTTTCTACAGCCAGCAGAACCAACCCAACTTGGATACCCAGAGTGGGCCAGAAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GAGCCTCCTGGACCAGTCTGTACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTGCTCTCAGTGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: EPPGPVCTTTES*VFQISCSQWSP
Trigger: TGGACTCCACTGAGAGCAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS TCA 72 bp ATGGAAGGAGCCTCCTGGACCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGATCTCCTGCTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: MEGASWTSLYHN*VLGVPDLLLSV
Trigger: CACTGAGAGCAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117637.8
ENSMUST00000118092.8
CDS GCA 72 bp CTCAGTGGAGTCCACAACCTCAGGCTTTGGAGGTTCTaGTCTTCTAACGCGCTCGCTTCTCTTCTGTACCCT +
Preference number: 6 (lower is better)
Translates to: LSGVHNLRLWRF*SSNALASLLYP
Trigger: AGGGTACAGAAGAGAAGCGAGCGCGTTAGAAGAGCAGAACCTCCAAAGCCTGAGGTTGTGGACTCCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000134005.2
CDS GCA 72 bp TGGGCACACTTGGAGTTGCTCTCTTCACAGGAGTCTTaGCCAAATTCCCATTCTCGTCTGGGGTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: WAHLELLSSQES*PNSHSRLGSSL
Trigger: CAGTGAGGACCCCAGACGAGAATGGGAATTTGGGCAAGACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS GCA 72 bp CTTCTGTCTGACTTCCTTTGGACTTCATTTCCGCCTTaGAGGAGACACCCCGGTTCTGCATCAGCGGCTTAC +
Preference number: 6 (lower is better)
Translates to: LLSDFLWTSFPP*RRHPGSASAAY
Trigger: GTAAGCCGCTGATGCAGAACCGGGGTGTCTCCTGCAAGGCGGAAATGAAGTCCAAAGGAAGTCAGACAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp ACTGTTCAGGAGGCTTTCTGGCCCACTCTGGGTATCCAAGTTGGGTaGGTTCTGCTGGCTGTAGAAACGCAGCAGACACTGTTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: TVQEAFWPTLGIQVG*VLLAVETQQTLLVA
Trigger: TGCAACCAACAGTGTCTGCTGCGTTTCTACAGCCAGCAGAACCAACCCAACTTGGATACCCAGAGTGGGCCAGAAAGCCTCCTGAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 72 bp AATCGCTGCAGAGTCGGTGTACCACGCTGCCATTGCTaGCCTCATGAAGAACCTCTCCAGTCTTCTGGCATA +
Preference number: 6 (lower is better)
Translates to: NRCRVGVPRCHC*PHEEPLQSSGI
Trigger: TATGCCAGAAGACTGGAGAGGTTCTTCATGAGGTCAGCAATGGCAGCGTGGTACACCGACTCTGCAGCGATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000063577.10
ENSMUST00000117637.8
ENSMUST00000117901.8
ENSMUST00000118092.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS TCA 72 bp GCTTCGGTCCATGGGAATCACAGAATACCAGAGAGGTaGTTCGGCAATGCAGGAGCGCTCAGGTTGCAGATA +
Preference number: 6 (lower is better)
Translates to: ASVHGNHRIPER*FGNAGALRLQI
Trigger: TATCTGCAACCTGAGCGCTCCTGCATTGCCGAATCACCTCTCTGGTATTCTGTGATTCCCATGGACCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp GACTTCATTTCCGCCTTGCAGGAGACACCCCGGTTCTaGATCAGCGGCTTACACATGGCAGCTTTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: DFISALQETPRF*ISGLHMAALFL
Trigger: CAAAAACAAAGCTGCCATGTGTAAGCCGCTGATGCAGAACCGGGGTGTCTCCTGCAAGGCGGAAATGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp GCATGGGTTTGGGGCCAAAGCGTAGCTCATCACCTTTaGTGGTCTCTCCATTGGCGTATTTTGACTGTACCC +
Preference number: 6 (lower is better)
Translates to: AWVWGQSVAHHL*WSLHWRILTVP
Trigger: GGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGGCCCCAAACCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp AGCCTCCTGGACCAGTCTGTACCACAACTGAGTCCTTaGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: SLLDQSVPQLSP*CSRSPSCRRYR
Trigger: CCTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp TGGGTTTGGGGCCAAAGCGTAGCTCATCACCTTTGCTaGTCTCTCCATTGGCGTATTTTGACTGTACCCAGC +
Preference number: 6 (lower is better)
Translates to: WVWGQSVAHHLC*SLHWRILTVPS
Trigger: GCTGGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGGCCCCAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GAGCCTCCTGGACCAGTCTGTACCACAACTGAGTCCTaGGTGTTCCAGATCTCCTTCTTGCAGAAGGTACAG +
Preference number: 6 (lower is better)
Translates to: EPPGPVCTTTES*VFQISFLQKVQ
Trigger: CTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp CGCATGGGTTTGGGGCCAAAGCGTAGCTCATCACCTTaGCTGGTCTCTCCATTGGCGTATTTTGACTGTACC +
Preference number: 6 (lower is better)
Translates to: RMGLGPKRSSSP*LVSPLAYFDCT
Trigger: GGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGGCCCCAAACCCATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp TTGAGCTCAGCAGCTGAACAGGCGAGAATATCCTCCTaGATACGCATGGGTTTGGGGCCAAAGCGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: LSSAAEQARISS*IRMGLGPKRSS
Trigger: TGAGCTACGCTTTGGCCCCAAACCCATGCGTATCAAGGAGGATATTCTCGCCTGTTCAGCTGCTGAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp CACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTGCAGAGTCGGTGTACCACGCTGCCA +
Preference number: 6 (lower is better)
Translates to: HWSQQLVFSPLLARN*EKQESLQSRCTTLP
Trigger: TGGCAGCGTGGTACACCGACTCTGCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 90 bp ATTCTCGTCTGGGGTCCTCACTGTGTGGTTGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGCTTGGACTCAGAAGACTGACTGTTCAG +
Preference number: 6 (lower is better)
Translates to: ILVWGPHCVVVLHFG*RGCLGLGLRRLTVQ
Trigger: CTGAACAGTCAGTCTTCTGAGTCCAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAACAACCACACAGTGAGGACCCCAGACGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS CAA 90 bp GGTTTGGGGCCAAAGCGTAGCTCATCACCTTTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACCCAGCATTTCCAAGCATTGACACCG +
Preference number: 6 (lower is better)
Translates to: GLGPKRSSSPLLVSP*AYFDCTQHFQALTP
Trigger: CGGTGTCAATGCTTGGAAATGCTGGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGGCCCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 72 bp ATGGAAGGAGCCTCCTGGACCAGTCTGTACCACAACTaGGTCCTTGGTGTTCCAGATCTCCTTCTTGCAGAA +
Preference number: 6 (lower is better)
Translates to: MEGASWTSLYHN*VLGVPDLLLAE
Trigger: TTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCAGTTGTGGTACAGACTGGTCCAGGAGGCTCCTTCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS GCA 72 bp TGGTCCAGCAGCTGGGGCTGCAGAACTGGTAGACTGTaGGATCAACTTTGTTGTAGTAACAAGGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: WSSSWGCRTGRL*DQLCCSNKGQR
Trigger: TCTCTGACCCTTGTTACTACAACAAAGTTGATCGCACAGTCTACCAGTTCTGCAGCCCCAGCTGCTGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp CTTCACAGGAGTCTTGCCCAAATTCCCATTCTCGTCTaGGGTCCTCACTGTGTGGTTGTTCTCCACTTTGGT +
Preference number: 6 (lower is better)
Translates to: LHRSLAQIPILV*GPHCVVVLHFG
Trigger: ACCAAAGTGGAGAACAACCACACAGTGAGGACCCCAGACGAGAATGGGAATTTGGGCAAGACTCCTGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000121520.8
CDS CAA 72 bp GCCCCACACTGGTCACAACAGTTGGTTTTCAGTCCCTaGTTGGCTCGGAATTTGGAGAAGCAAGAATCGCTG +
Preference number: 6 (lower is better)
Translates to: APHWSQQLVFSP*LARNLEKQESL
Trigger: CAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp TGGTTGCTCACAAGATCACAAAGATCCGAGGAGGCCTaGTCTAACTCTTCGGCCTCTGCAATCATCTCTGCC +
Preference number: 6 (lower is better)
Translates to: WLLTRSQRSEEA*SNSSASAIISA
Trigger: GGCAGAGATGATTGCAGAGGCCGAAGAGTTAGACAAGGCCTCCTCGGATCTTTGTGATCTTGTGAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GTCCCTGGAACAGCTTTCAGAAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCTAGGAAGGTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: VPGTAFRKHQPL*TLPHGSRKVLF
Trigger: GAACAGGACCTTCCTAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTTTCTGAAAGCTGTTCCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp TTGAGCTCAGCAGCTGAACAGGCGAGAATATCCTCCTaGATACGCATGGGTTTGGCTTTGCTGGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSSAAEQARISS*IRMGLALLVSP
Trigger: TGGAGAGACCAGCAAAGCCAAACCCATGCGTATCAAGGAGGATATTCTCGCCTGTTCAGCTGCTGAGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117901.8
CDS CAA 72 bp GAGTGGGCACACTTGGAGTTGCTCTCTTCACAGGAGTaGTGTGGTTGTTCTCCACTTTGGTTTGAGAGGGTG +
Preference number: 6 (lower is better)
Translates to: EWAHLELLSSQE*CGCSPLWFERV
Trigger: CACCCTCTCAAACCAAAGTGGAGAACAACCACACAACTCCTGTGAAGAGAGCAACTCCAAGTGTGCCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS CAA 90 bp GCTCAGAGAGTCCCTGGAACAGCTTTCAGAAAGCATCAGCCTCTTTaGACCCTTCCTCATGGCTCTAGGAAGGTCCTGTTCAGTAGATAC +
Preference number: 6 (lower is better)
Translates to: AQRVPGTAFRKHQPL*TLPHGSRKVLFSRY
Trigger: GTATCTACTGAACAGGACCTTCCTAGAGCCATGAGGAAGGGTCAAAAGAGGCTGATGCTTTCTGAAAGCTGTTCCAGGGACTCTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp TCCTTGATACGCATGGGTTTGGGGCCAAAGCGTAGCTCATCACCTTaGCTGGTCTCTCCATTGGCGTATTTTGACTGTACCCAGCATTTC +
Preference number: 6 (lower is better)
Translates to: SLIRMGLGPKRSSSP*LVSPLAYFDCTQHF
Trigger: GAAATGCTGGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGGCCCCAAACCCATGCGTATCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp AGTTGCTCTCTTCACAGGAGTTGTGTGGTTGTTCTCCACTTTGGTTaGAGAGGGTGTCTGGGGCTTGGACTCAGAAGACTGACTGTTCAG +
Preference number: 6 (lower is better)
Translates to: SCSLHRSCVVVLHFG*RGCLGLGLRRLTVQ
Trigger: CTGAACAGTCAGTCTTCTGAGTCCAAGCCCCAGACACCCTCTCAAACCAAAGTGGAGAACAACCACACAACTCCTGTGAAGAGAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120107.8
CDS GCA 72 bp ATTGAGAAAGGCACCGGGACTTTCTGGCAGTATAGATaGATAGGCACTGGCACAAATATGGGCACTGGGATG +
Preference number: 6 (lower is better)
Translates to: IEKGTGTFWQYR*IGTGTNMGTGM
Trigger: CATCCCAGTGCCCATATTTGTGCCAGTGCCTATGCATCTATACTGCCAGAAAGTCCCGGTGCCTTTCTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp ACGGGGCAGCGGAGGGGATTCATGCGATTCTCACGCTaGTCTAAGATAGTTTCATCTTCTCTCTTTCGTTTC +
Preference number: 6 (lower is better)
Translates to: TGQRRGFMRFSR*SKIVSSSLFRF
Trigger: GAAACGAAAGAGAGAAGATGAAACTATCTTAGAGCAGCGTGAGAATCGCATGAATCCCCTCCGCTGCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp CAACAGTTGGTTTTCAGTCCCTTGTTGGCTCGGAATTaGGAGAAGCAAGAATCGCTGCAGAGTCGGTGTACC +
Preference number: 6 (lower is better)
Translates to: QQLVFSPLLARN*EKQESLQSRCT
Trigger: GGTACACCGACTCTGCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp CCACACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTaGGCTCGGAATTTGGAGAAGCAAGAATCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PHWSQQLVFSPL*ARNLEKQESLQ
Trigger: CTGCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CAA 72 bp CACAAATATGGGCACTGGGATGGGCAGCACAATCACTaGTGGCTTCCACTCTTCTGTCTGACTTCCTTTGGA +
Preference number: 6 (lower is better)
Translates to: HKYGHWDGQHNH*WLPLFCLTSFG
Trigger: TCCAAAGGAAGTCAGACAGAAGAGTGGAAGCCACAAGTGATTGTGCTGCCCATCCCAGTGCCCATATTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp CACACTGGTCACAACAGTTGGTTTTCAGTCCCTTGTTaGCTCGGAATTTGGAGAAGCAAGAATCGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: HTGHNSWFSVPC*LGIWRSKNRCR
Trigger: TCTGCAGCGATTCTTGCTTCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp TGGCATAGATGTAAGCCCCACACTGGTCACAACAGTTaGTTTTCAGTCCCTTGTTGGCTCGGAATTTGGAGA +
Preference number: 6 (lower is better)
Translates to: WHRCKPHTGHNS*FSVPCWLGIWR
Trigger: TCTCCAAATTCCGAGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGCTTACATCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
CDS CCA 72 bp AAATATGGGCACTGGGATGGGCAGCACAATCACTTGTaGCTTCCACTCTTCTGTCTGACTTCCTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: KYGHWDGQHNHL*LPLFCLTSFGL
Trigger: AAGTCCAAAGGAAGTCAGACAGAAGAGTGGAAGCCACAAGTGATTGTGCTGCCCATCCCAGTGCCCATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp CCAAAGCGTAGCTCATCACCTTTGCTGGTCTCTCCATaGGCGTATTTTGACTGTACCCAGCATTTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: PKRSSSPLLVSP*AYFDCTQHFQA
Trigger: TGCTTGGAAATGCTGGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp GGGGAGGAGTGTGGGCTGCCAGGTACTCAGAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTAAAGGTCCGTGAAAATGTTCACCAT +
Preference number: 6 (lower is better)
Translates to: GEECGLPGTQRLVEF*NESQVVKVRENVHH
Trigger: ATGGTGAACATTTTCACGGACCTTTACTACTTGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTACCTGGCAGCCCACACTCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS TCA 72 bp GTTCCTCATAAATCTCACGCACAGCTAAAATGCGATTaGGCATGCTCTCCAACATGCTTCGGTCCATGGGAA +
Preference number: 6 (lower is better)
Translates to: VPHKSHAQLKCD*ACSPTCFGPWE
Trigger: TTCCCATGGACCGAAGCATGTTGGAGAGCATGCTCAATCGCATTTTAGCTGTGCGTGAGATTTATGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp ATGGCACAAAGTCCTCATCATTGGGGTCATCTACCATaGCATCAGAATCCTCATCTGACACTGGAATGCTCT +
Preference number: 6 (lower is better)
Translates to: MAQSPHHWGHLP*HQNPHLTLECS
Trigger: AGAGCATTCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000119699.8
ENSMUST00000120107.8
ENSMUST00000120201.8
ENSMUST00000121429.8
ENSMUST00000121520.8
ENSMUST00000134005.2
CDS CCA 72 bp CTCAAAGTTCTTACACAGGGTCTTGCACCAGACACATaGGTACACACGTGTGTTTTTCTTCTTGTATGCCCC +
Preference number: 6 (lower is better)
Translates to: LKVLTQGLAPDT*VHTCVFLLVCP
Trigger: GGGGCATACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CCA 72 bp CAAAGCGTAGCTCATCACCTTTGCTGGTCTCTCCATTaGCGTATTTTGACTGTACCCAGCATTTCCAAGCAT +
Preference number: 6 (lower is better)
Translates to: QSVAHHLCWSLH*RILTVPSISKH
Trigger: ATGCTTGGAAATGCTGGGTACAGTCAAAATACGCCAATGGAGAGACCAGCAAAGGTGATGAGCTACGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063577.10
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp GAAGTGGTACAGCACAGGGAACAGAACAAGCTGGTCTaGCCATTACGATCCACATGTGATAGCATCTCAAAG +
Preference number: 6 (lower is better)
Translates to: EVVQHREQNKLV*PLRSTCDSISK
Trigger: CTTTGAGATGCTATCACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCCTGTGCTGTACCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp AAGTGGTACAGCACAGGGAACAGAACAAGCTGGTCTTaGCATTACGATCCACATGTGATAGCATCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: KWYSTGNRTSWS*HYDPHVIASQS
Trigger: ACTTTGAGATGCTATCACATGTGGATCGTAATGGCAAGACCAGCTTGTTCTGTTCCCTGTGCTGTACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp TCCAAAGGATTCTTGGGGAAATCAGCCTCCAAGTCTTaGCCAGGCTCATCTAAGACATTAGCCATCTTAACA +
Preference number: 6 (lower is better)
Translates to: SKGFLGKSASKS*PGSSKTLAILT
Trigger: TGTTAAGATGGCTAATGTCTTAGATGAGCCTGGGCAAGACTTGGAGGCTGATTTCCCCAAGAATCCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp CATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTTaGACCAGACACATGGGTACACACGTGTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: HVIASQSSYTGS*TRHMGTHVCFS
Trigger: AGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp ACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTaGCACCAGACACATGGGTACACACGTGTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: TCDSISKFLHRV*HQTHGYTRVFF
Trigger: GAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp TGTGGGCTGCCAGGTACTCAGAGACTTGTTGAGTTCTaGAACGAAAGTCAAGTAGTAAAGGTCCGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: CGLPGTQRLVEF*NESQVVKVREN
Trigger: ATTTTCACGGACCTTTACTACTTGACTTTCGTTCAAGAACTCAACAAGTCTCTGAGTACCTGGCAGCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp GTACAGGTGATACAACATAAGCCCAGCTTCTTAGTAAAATCTTGCTaGTACAGCAGTACACAGCCTTCACTGCAGAAGCTTTTCTCTACC +
Preference number: 6 (lower is better)
Translates to: VQVIQHKPSFLVKSC*YSSTQPSLQKLFST
Trigger: GGTAGAGAAAAGCTTCTGCAGTGAAGGCTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAGCTGGGCTTATGTTGTATCACCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS GCA 72 bp GTGATACAACATAAGCCCAGCTTCTTAGTAAAATCTTaGTTGTACAGCAGTACACAGCCTTCACTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: VIQHKPSFLVKS*LYSSTQPSLQK
Trigger: CTTCTGCAGTGAAGGCTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAGCTGGGCTTATGTTGTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 90 bp TTACGATCCACATGTGATAGCATCTCAAAGTTCTTACACAGGGTCTaGCACCAGACACATGGGTACACACGTGTGTTTTTCTTCTTGTAT +
Preference number: 6 (lower is better)
Translates to: LRSTCDSISKFLHRV*HQTHGYTRVFFFLY
Trigger: ATACAAGAAGAAAAACACACGTGTGTACCCATGTGTCTGGTGCAAGACCCTGTGTAAGAACTTTGAGATGCTATCACATGTGGATCGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8
CDS CAA 72 bp ATACAACATAAGCCCAGCTTCTTAGTAAAATCTTGCTaGTACAGCAGTACACAGCCTTCACTGCAGAAGCTT +
Preference number: 6 (lower is better)
Translates to: IQHKPSFLVKSC*YSSTQPSLQKL
Trigger: AAGCTTCTGCAGTGAAGGCTGTGTACTGCTGTACAAGCAAGATTTTACTAAGAAGCTGGGCTTATGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063577.10
ENSMUST00000117901.8
ENSMUST00000120107.8
ENSMUST00000121520.8