Pregenerated sensors for ZMYM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043872Ensembl transcript IDs: ENSMUST00000055013.10, ENSMUST00000106099.8, ENSMUST00000106102.9, ENSMUST00000136186.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCACACGGTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTaGCACTGGGAATTGAATCTGGGCCTTATGCATTCTAGGGACGTT | + |
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Preference number: 1 (lower is better) Translates to: MHTVTSSYDGITGLP*HWELNLGLMHSRDV Trigger: AACGTCCCTAGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGACCGTGTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 90 bp | ACGGTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTaGGAATTGAATCTGGGCCTTATGCATTCTAGGGACGTTAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: TVTSSYDGITGLPWH*ELNLGLMHSRDVKY Trigger: ATACTTAACGTCCCTAGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR TCA 90 bp | CTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGAATTaGATCTGGGCCTTATGCATTCTAGGGACGTTAAGTATGTTACCA | + |
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Preference number: 1 (lower is better) Translates to: LAAMMVLQDFLGTGN*IWALCILGTLSMLP Trigger: TGGTAACATACTTAACGTCCCTAGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 90 bp | ATGCATTCTAGGGACGTTAAGTATGTTACCAATGAGTCACAGTCCTaGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGATTTCTATAT | + |
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Preference number: 1 (lower is better) Translates to: MHSRDVKYVTNESQS*RKVCRCARLTRFLY Trigger: ATATAGAAATCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAACATACTTAACGTCCCTAGAATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 90 bp | GTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTaGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGT | + |
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Preference number: 1 (lower is better) Translates to: VNVLNVDVPTTQYVN*NTLKEKSQVRGSIS Trigger: ACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CAA 90 bp | ACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGAATaGAATCTGGGCCTTATGCATTCTAGGGACGTTAAGTATGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: TSSYDGITGLPWHWE*NLGLMHSRDVKYVT Trigger: GGTAACATACTTAACGTCCCTAGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR-3UTR CCA 90 bp | GTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGAATTGAATACATATCATACTATCTaGCATATAGTAGTTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VTSSYDGITGLPWHWELNTYHTI*HIVVAQ Trigger: CTGAGCAACTACTATATGCCAGATAGTATGATATGT...ATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 72 bp | AGGGACGTTAAGTATGTTACCAATGAGTCACAGTCCTaGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGA | + |
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Preference number: 3 (lower is better) Translates to: RDVKYVTNESQS*RKVCRCARLTR Trigger: TCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAACATACTTAACGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 72 bp | AGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTaGGAATTGAATCTGGGCCTTATGCATTCTAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSYDGITGLPWH*ELNLGLMHSRD Trigger: GTCCCTAGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 72 bp | GTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTaGCACTGGGAATTGAATCTGGGCCTTATGCATTCT | + |
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Preference number: 3 (lower is better) Translates to: VTSSYDGITGLP*HWELNLGLMHS Trigger: AGAATGCATAAGGCCCAGATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| 3UTR CCA 72 bp | TTAAATGTAGATGTGCCTACGACACAATACGTCAACTaGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LNVDVPTTQYVN*NTLKEKSQVRG Trigger: CCCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | TTACCAATGAGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGCTGGACTCACTGGCTaGGTTGCTCATGATGACATC | + |
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Preference number: 4 (lower is better) Translates to: LPMSHSPGGKCAAVPGLLAGLTG*VAHDDI Trigger: GATGTCATCATGAGCAACTCAGCCAGTGAGTCCAGC...TAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | GTGCCTACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAGGGCTGGGATGCAGATaGTGGAGAGCTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPTTQYVNWNTLKEKSQVGLGCR*WRAGLQ Trigger: CTGGAGCCCAGCTCTCCAGCATCTGCATCCCAGCCC...TACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGAGCACCGAGCAAGGTaGGAGGAGGCCTGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YDTIRQLEYFKGEESGKREHRAR*EEAWLV Trigger: GACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTC...CCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | CTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTGGGATGCAGATGCTaGAGAGCTGGGCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LEYFKGEESGKRVNQSQELGCRC*RAGLQG Trigger: GCCCTGGAGCCCAGCTCTCCAGCATCTGCATCCCAG...CTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAGATGCTGGAGAGCTaGGCTCCAGGGCTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LKEKSQVRGSISLKSLQIQMLES*APGLSR Trigger: CCGGGAGAGCCCTGGAGCCCAGCTCTCCAGCATCTG...AATTTGTAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | TTACCAATGAGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGCAAGAATAGCAGAATaGGATATTGTCTGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPMSHSPGGKCAAVPGLLARIAE*DIVCRA Trigger: AGCCCTGCAGACAATATCGCATTCTGCTATTCTTGC...TAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | AATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTAATCCGCCCATGCACGTaGACCCCAGTCACCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NTLKEKSQVRGSISLKSLIRPCT*TPVTSS Trigger: CGAGGAGGTGACTGGGGTCCACGTGCATGGGCGGAT...TAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | CTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGTGGAGACACAGCAGGTaGCGGGTACCCATCAATGCA | + |
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Preference number: 4 (lower is better) Translates to: LEYFKGEESGKRVNQSQEWRHSR*RVPINA Trigger: TGCATTGATGGGTACCCGTCACCTGCTGTGTCTCCA...CTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | AGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGATTTCTATTGGGAACTCATGAGCTaGAATACCTCTCCTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: SHSPGGKCAAVPGLLDFYWELMS*NTSPLS Trigger: AGATAGAGGAGAGGTATTTCAGCTCATGAGTTCCCA...ATAGAAATCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | TGCACACGGTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGGATGAAGTTGAAACCTaGATACTGCCGGTAAAATCG | + |
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Preference number: 4 (lower is better) Translates to: CTRSLAAMMVLQDFLGTGDEVET*ILPVKS Trigger: CGATTTTACCGGCAGTATGCAGGTTTCAACTTCATC...CCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGACCGTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TGCACACGGTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGTCTGTTCTGTTAATGTaGACTTTGAGAGACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: CTRSLAAMMVLQDFLGTGSVLLM*TLRDTA Trigger: GGCTGTGTCTCTCAAAGTCCACATTAACAGAACAGA...CCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGACCGTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTACCAATGAGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAAACTGCCTTTATTCATaGGTGAAACAGACTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LPMSHSPGGKCAAVPGLLNCLYS*VKQTGH Trigger: ATGACCAGTCTGTTTCACCCATGAATAAAGGCAGTT...TAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTACGGCCAGCAGCAAATaGTCGTGGGCTGGCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVTASSK*SWAGQH Trigger: GTGTTGGCCAGCCCACGACCATTTGCTGCTGGCCGT...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | AGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGATTTCTATGACTTAGCTTACACATaGTTTGCAAACTTGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: SHSPGGKCAAVPGLLDFYDLAYT*FANLPT Trigger: TGTTGGCAAGTTTGCAAACCATGTGTAAGCTAAGTC...ATAGAAATCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | GAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAAGACTAGCCTAGGCTACAGACACAGCACTGTTGTATaGAGAAGAACAAGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EGQSVSRAYKFKTSLGYRHSTVV*RRTSRA Trigger: TGCTCTGCTTGTTCTTCTTCATACAACAGTGCTGTG...TCTGTAGCCTAGGCTAGTCTTGAATTTGTAAGCTCTTGAGACTGATTGACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | GAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAAGACTAGCCTAGGCTACAGATTGTGGAGAGCATGCTaGATAAACAAAGAGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: EGQSVSRAYKFKTSLGYRLWRAC*INKEPR Trigger: CCTAGGCTCTTTGTTTATTCAGCATGCTCTCCACAA...TCTGTAGCCTAGGCTAGTCTTGAATTTGTAAGCTCTTGAGACTGATTGACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | TACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGAATGCGATATTGTCTaGAGGGCTGGGATGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: YDTIRQLEYFKGEESGKRECDIV*RAGMQM Trigger: CATCTGCATCCCAGCCCTGCAGACAATATCGCATTC...CCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGACTTGGCGTCTTTTGTaGGTACCTCACACACACGGA | + |
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Preference number: 4 (lower is better) Translates to: YDTIRQLEYFKGEESGKRTWRLL*VPHTHG Trigger: TCCGTGTGTGTGAGGTACCCACAAAAGACGCCAAGT...CCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | GTCACTAGCAGCTATGATGGTATTACAGGACTTCCTTGGCACTGGGAATTGAATTCGAGAAACTGGTATTaGCTCCAAAATTGCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VTSSYDGITGLPWHWELNSRNWY*LQNCSD Trigger: GTCACTGCAATTTTGGAGGCAATACCAGTTTCTCGA...ATTCAATTCCCAGTGCCAAGGAAGTCCTGTAATACCATCATAGCTGCTAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGTATTGTCTGCAGGGCTaGGATGCAGATGCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLYCLQG*DADAGE Trigger: CTCTCCAGCATCTGCATCCCAGCCCTGCAGACAATA...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | GTGCCTACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAGCTGTCTGTCCCTCCTaGAAAACTCTTTTACATTTG | + |
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Preference number: 4 (lower is better) Translates to: VPTTQYVNWNTLKEKSQVAVCPS*KTLLHL Trigger: CAAATGTAAAAGAGTTTTTCAGGAGGGACAGACAGC...TACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | AATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTATTAGTAGATGTCTTCTaGCACATGCTGCACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NTLKEKSQVRGSISLKSLLVDVF*HMLHLG Trigger: GCCCAAGTGCAGCATGTGTCAGAAGACATCTACTAA...TAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | TACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGCATGGATACATTAACTaGAGGAGACTCCATCACAGC | + |
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Preference number: 4 (lower is better) Translates to: YDTIRQLEYFKGEESGKRHGYIN*RRLHHS Trigger: GCTGTGATGGAGTCTCCTTCAGTTAATGTATCCATG...CCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | GTGCCTACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAACACATGAACTGTGTTaGACAAAGAGCAGAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPTTQYVNWNTLKEKSQVTHELC*TKSREC Trigger: ACACTCTCTGCTCTTTGTTCAACACAGTTCATGTGT...TACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | AATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTAAGCAGTTCCTTGGGTTaGAAAAGCTTCTCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: NTLKEKSQVRGSISLKSLSSSLG*KSFSPT Trigger: TGTCGGAGAGAAGCTTTTGCAACCCAAGGAACTGCT...TAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | GAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAAGACTAGCCTAGGCTACAGACATGGTTTGCAAACTTaGCAACATTTCTTCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: EGQSVSRAYKFKTSLGYRHGLQT*QHFFRH Trigger: GTGTCTGAAGAAATGTTGGCAAGTTTGCAAACCATG...TCTGTAGCCTAGGCTAGTCTTGAATTTGTAAGCTCTTGAGACTGATTGACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAGTCAGCAGTTCCTTaGGTTGCAAAAGCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKEKSQVRGSISLKSLQIQSAVP*VAKASL Trigger: GAGAGAAGCTTTTGCAACCCAAGGAACTGCTGACTG...AATTTGTAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTTTAAGCACATCCTTTTaGGAGGAGCTGGAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVLSTSF*EELETQ Trigger: CTGTGTCTCCAGCTCCTCTCAAAAGGATGTGCTTAA...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | TACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGACAGAGATTCTCTTTTaGAGAACTGTGCACCATGGA | + |
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Preference number: 4 (lower is better) Translates to: YDTIRQLEYFKGEESGKRTEILF*RTVHHG Trigger: TCCATGGTGCACAGTTCTTCAAAAGAGAATCTCTGT...CCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTATGTCTTCTGACACATaGTGCACTTGGGCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVMSSDT*CTWANC Trigger: GCAGTTTGCCCAAGTGCAGCATGTGTCAGAAGACAT...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | CTGGAATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGACATATGCTCTGAGTTaGCAGGATCTACTGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LEYFKGEESGKRVNQSQETYALS*QDLLFF Trigger: AAAGAACAGTAGATCCTGGCAACTCAGAGCATATGT...CTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR TCA 90 bp | AGTTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACGCCTTTATTCATGGGTaGAACAGACTGGTCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SCSVNVLNVDVPTTQYVNAFIHG*NRLVIS Trigger: GGAAATGACCAGTCTGTTTCACCCATGAATAAAGGC...GTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACGACACATGCTGCACTTaGGCAAACTGCTATCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SCSVNVLNVDVPTTQYVNDTCCT*ANCYQY Trigger: ATACTGATAGCAGTTTGCCCAAGTGCAGCATGTGTC...GTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR GCA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGACGGGTACCCATCAATaGATAGTCTTGAGCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLTGTHQ*IVLSRK Trigger: TTTTCTGCTCAAGACTATGCATTGATGGGTACCCGT...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTACAAATTATAGCATCGAGAAACTaGTATTGCCTCCAAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: LKEKSQVRGSISLKSLQIIASRN*YCLQNC Trigger: GCAATTTTGGAGGCAATACCAGTTTCTCGATGCTAT...AATTTGTAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
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| CDS-3UTR CCA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGCACATAGAGAGCTCTTaGCTCTTCCTTCTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLHIESS*LFLLEF Trigger: GAATTCAAGAAGGAAGAGCCAAGAGCTCTCTATGTG...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR TCA 90 bp | AGTTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTTGGCTCTTCCTTCTTaGATTCTGCTACAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSVNVLNVDVPTTQYVNLALPS*ILLQLH Trigger: ATGAAGTTGTAGCAGAATTCAAGAAGGAAGAGCCAA...GTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGTATTGCCTCCAAAATTaGAGTGACTTTAAGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLYCLQN*SDFKCT Trigger: CGTGCACTTAAAGTCACTGCAATTTTGGAGGCAATA...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTCTCGGGAATGATGTCTaGATCAAGCTTATAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVLGNDV*IKLIEF Trigger: GAATTCTATAAGCTTGATGCAGACATCATTCCCGAG...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACAAACTCTTTTACATTTaGCACAGGAGAGTCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSVNVLNVDVPTTQYVNKLFYI*HRRVEQ Trigger: CTGTTCGACTCTCCTGTGCCAAATGTAAAAGAGTTT...GTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGAGCTTACACATGGTTTaGAAACTTGCCAACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLSLHMV*KLANIS Trigger: AGAAATGTTGGCAAGTTTGCAAACCATGTGTAAGCT...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CCA 90 bp | AATACTTTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTATATCATTTCCTTCCATaGATTTCTCACTGTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLKEKSQVRGSISLKSLYHFLP*ISHCCS Trigger: AGAACAACAGTGAGAAATCCATGGAAGGAAATGATA...TAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAAAGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTTCTTTTGAAGAACTGTaGACCATGGATACATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVSFEEL*TMDTLT Trigger: AGTTAATGTATCCATGGTGCACAGTTCTTCAAAAGA...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTCAAGATAAAGCAATATaGAACAGCTTCGTGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: LILCYTSSTYHTIWHIVVQDKAI*NSFVIQ Trigger: TTGTATCACGAAGCTGTTGCATATTGCTTTATCTTG...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS CCA 90 bp | GCTGTGTCCTCACAGAGCACCGAGCAAGGTGGGAGGAGGCCTGGCTaGTCCGCACTATTACCAACACCACTGCTGGACTCACTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVSSQSTEQGGRRPG*SALLPTPLLDSLAE Trigger: CTCAGCCAGTGAGTCCAGCAGTGGTGTTGGTAATAGTGCGGACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTCTGTGAGGACACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 90 bp | AGCAGCTGTGTCCTCACAGAGCACCGAGCAAGGTGGGAGGAGGCCTaGCTGGTCCGCACTATTACCAACACCACTGCTGGACTCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCVLTEHRARWEEA*LVRTITNTTAGLTG Trigger: GCCAGTGAGTCCAGCAGTGGTGTTGGTAATAGTGCGGACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTCTGTGAGGACACAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 90 bp | AGAACAAGTAGCAAGAATAGCAGAATGCGATATTGTCTGCAGGGCTaGGATGCAGATGCTGGAGAGCTGGGCTCCAGGGCTCTCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTSSKNSRMRYCLQG*DADAGELGSRALPE Trigger: CTCCGGGAGAGCCCTGGAGCCCAGCTCTCCAGCATCTGCATCCCAGCCCTGCAGACAATATCGCATTCTGCTATTCTTGCTACTTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS GCA 90 bp | TTTCTGGAAGAACAAGTAGCAAGAATAGCAGAATGCGATATTGTCTaGAGGGCTGGGATGCAGATGCTGGAGAGCTGGGCTCCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLEEQVARIAECDIV*RAGMQMLESWAPGL Trigger: GAGCCCTGGAGCCCAGCTCTCCAGCATCTGCATCCCAGCCCTGCAGACAATATCGCATTCTGCTATTCTTGCTACTTGTTCTTCCAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 90 bp | GGCAGTCACAAACCCCAGGAACCTTTCCTTAACCAAGACAGCACTTaGCGTCTTTTGTGGGTACCTCACACACACGGAAAGCTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSHKPQEPFLNQDST*RLLWVPHTHGKLSL Trigger: GAGAGACAGCTTTCCGTGTGTGTGAGGTACCCACAAAAGACGCCAAGTGCTGTCTTGGTTAAGGAAAGGTTCCTGGGGTTTGTGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS GCA 90 bp | GAAACCTGCATACTGCCGGTAAAATCGGAGCTCGGGAATGATGTCTaGATCAAGCTTATAGAATTCCTGGATGTGCTTGGCTGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETCILPVKSELGNDV*IKLIEFLDVLGCCF Trigger: GAAGCAACAGCCAAGCACATCCAGGAATTCTATAAGCTTGATGCAGACATCATTCCCGAGCTCCGATTTTACCGGCAGTATGCAGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS CCA 90 bp | CTGTTAATGTGGACTTTGAGAGACACAGCCTATCATTTCCTTCCATaGATTTCTCACTGTTGTTCTCTACTCCCTCACCGGGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLMWTLRDTAYHFLP*ISHCCSLLPHREQL Trigger: CAGCTGCTCCCGGTGAGGGAGTAGAGAACAACAGTGAGAAATCCATGGAAGGAAATGATAGGCTGTGTCTCTCAAAGTCCACATTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAAGACTAGCCTAGGCTACAGATCTCCTCGCAGATTATaGAAAAGGCTGAGGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: EGQSVSRAYKFKTSLGYRSPRRL*KRLRRR Trigger: ACGCCTCCTCAGCCTTTTCAATAATCTGCGAGGAGA...TCTGTAGCCTAGGCTAGTCTTGAATTTGTAAGCTCTTGAGACTGATTGACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | TTACCAATGAGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAAATTCCTGGATGTGCTaGGCTGTTGCTTCATTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPMSHSPGGKCAAVPGLLNSWMC*AVASFN Trigger: ATTAAATGAAGCAACAGCCAAGCACATCCAGGAATT...TAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS TCA 90 bp | CCTTTAGACTTAAAATGTCTCTTGAGCAATTTAAGCACATCCTTTTaGGAGGAGCTGGAGACACAGCAGGTGACGGGTACCCATCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PLDLKCLLSNLSTSF*EELETQQVTGTHQC Trigger: GCATTGATGGGTACCCGTCACCTGCTGTGTCTCCAGCTCCTCTCAAAAGGATGTGCTTAAATTGCTCAAGAGACATTTTAAGTCTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 ENSMUST00000136186.2 |
||
| CDS TCA 90 bp | AGCTTACACATGGTTTGCAAACTTGCCAACATTTCTTCAGACACATaGACTGTGTTGAACAAAGAGCAGAGAGTGTGTAGTGCCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHMVCKLANISSDT*TVLNKEQRVCSASR Trigger: CCGCGAGGCACTACACACTCTCTGCTCTTTGTTCAACACAGTTCATGTGTCTGAAGAAATGTTGGCAAGTTTGCAAACCATGTGTAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCAATCAGTCTCAAGAGCTTACAAATTCAAGACTAGCCTAGGCTACAGAATGGATTTCTCACTGTaGTTCTCTACTCCCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: EGQSVSRAYKFKTSLGYRMDFSL*FSTPSP Trigger: CGGTGAGGGAGTAGAGAACAACAGTGAGAAATCCAT...TCTGTAGCCTAGGCTAGTCTTGAATTTGTAAGCTCTTGAGACTGATTGACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGATTTCTATGGCACTATCATAGGCTaGGCCACATATTTTATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHSPGGKCAAVPGLLDFYGTIIG*ATYFIK Trigger: TTTAATAAAATATGTGGCCAAGCCTATGATAGTGCC...ATAGAAATCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGTCCTGGAGGAAAGTGTGCCGCTGTGCCAGGCTTACTAGATTTCTATAATATAAATTCAAACTaGGTAACCATGGCCAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSPGGKCAAVPGLLDFYNINSN*VTMANR Trigger: CCTGTTGGCCATGGTTACCAAGTTTGAATTTATATT...ATAGAAATCTAGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS GCA 90 bp | TGCCTCCAAAATTGCAGTGACTTTAAGTGCACGTCACTTTCTTCATaGTTTCTGAAATTTCCCAGCATTTTCTCCCAGTCAGCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLQNCSDFKCTSLSS*FLKFPSIFSQSAVP Trigger: AGGAACTGCTGACTGGGAGAAAATGCTGGGAAATTTCAGAAAGCATGAAGAAAGTGACGTGCACTTAAAGTCACTGCAATTTTGGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS TCA 90 bp | TACCAGCTATCTCCTCGCAGATTATTGAAAAGGCTGAGGAGGCGTTaGTCTCACTCACGATGTCTTGCAACATTTCATCCTTTATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YQLSPRRLLKRLRRR*SHSRCLATFHPLSF Trigger: AAATGATAAAGGATGAAATGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTTTTCAATAATCTGCGAGGAGATAGCTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS TCA 90 bp | TGCAACAGCTTCGTGATACAAGGAATATTATTGTGGAGAGCATGCTaGATAAACAAAGAGCCTAGGTCAATGAAGCTTAAGGACCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CNSFVIQGILLWRAC*INKEPRSMKLKDPS Trigger: GGATGGGTCCTTAAGCTTCATTGACCTAGGCTCTTTGTTTATTCAGCATGCTCTCCACAATAATATTCCTTGTATCACGAAGCTGTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | TTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACTGCCAGTCAGCAGTTCCTaGGGTTGCAAAAGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSKCIKCRCAYDTIRQLPVSSS*GCKSFS Trigger: AGAGAAGCTTTTGCAACCCAAGGAACTGCTGACTGG...CAGTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | GTGCCTACGACACAATACGTCAACTGGAATACTTTAAAGGAGAAGAGTCAGGTAAACATATGCTCTGAGTaGCCAGGATCTACTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPTTQYVNWNTLKEKSQVNICSE*PGSTVL Trigger: AAGAACAGTAGATCCTGGCAACTCAGAGCATATGTT...TACCTGACTCTTCTCCTTTAAAGTATTCCAGTTGACGTATTGTGTCGTAGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS GCA 90 bp | GTGACAATGCACATAGAGAGCTCTTGGCTCTTCCTTCTTGAATTCTaGTACAACTTCATTCAATTTTACCGTAAAATTTGTGGCACTATC | + |
|
Preference number: 5 (lower is better) Translates to: VTMHIESSWLFLLEF*YNFIQFYRKICGTI Trigger: GATAGTGCCACAAATTTTACGGTAAAATTGAATGAAGTTGTAGCAGAATTCAAGAAGGAAGAGCCAAGAGCTCTCTATGTGCATTGTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGCTCAGTAAATGTATTAAATGTAGATGTGCCTACGACACAATACGTCAACCTGTTAATGTGGACTTaGAGAGACACAGCCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCSVNVLNVDVPTTQYVNLLMWT*RDTAYH Trigger: ATGATAGGCTGTGTCTCTCAAAGTCCACATTAACAG...GTTGACGTATTGTGTCGTAGGCACATCTACATTTAATACATTTACTGAGCAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTCTTGGCTCTTCCTTCTaGAATTCTGCTACAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LILCYTSSTYHTIWHIVVLGSSF*NSATTS Trigger: TGAAGTTGTAGCAGAATTCAAGAAGGAAGAGCCAAG...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGAGAAGAGTCAGGTAAGAGGGTCAATCAGTCTCAAGAGCTTACAAATTACATGGTTTGCAAACTaGCCAACATTTCTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LKEKSQVRGSISLKSLQITWFAN*PTFLQT Trigger: TGTCTGAAGAAATGTTGGCAAGTTTGCAAACCATGT...AATTTGTAAGCTCTTGAGACTGATTGACCCTCTTACCTGACTCTTCTCCTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS GCA 90 bp | GACTTCTCATTATTTGCTGAAGTAATTGGCCAAGATAAAGCAATATaGAACAGCTTCGTGATACAAGGAATATTATTGTGGAGAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DFSLFAEVIGQDKAI*NSFVIQGILLWRAC Trigger: GCATGCTCTCCACAATAATATTCCTTGTATCACGAAGCTGTTGCATATTGCTTTATCTTGGCCAATTACTTCAGCAAATAATGAGAAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTCTCTGCTATACCTCCAGCACATATCATACTATCTGGCATATAGTAGTTTGGCTACAAAAGTTTTaGTCACAACTACTATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LILCYTSSTYHTIWHIVVWLQKF*SQLLSS Trigger: GGAGGATAGTAGTTGTGACAAAAACTTTTGTAGCCA...AACTACTATATGCCAGATAGTATGATATGTGCTGGAGGTATAGCAGAGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106102.9 |
||
| CDS CCA 72 bp | GGGAGCAGCTGTGTCCTCACAGAGCACCGAGCAAGGTaGGAGGAGGCCTGGCTGGTCCGCACTATTACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSSCVLTEHRAR*EEAWLVRTITN Trigger: GTTGGTAATAGTGCGGACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTCTGTGAGGACACAGCTGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 72 bp | GTCCTCACAGAGCACCGAGCAAGGTGGGAGGAGGCCTaGCTGGTCCGCACTATTACCAACACCACTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLTEHRARWEEA*LVRTITNTTAG Trigger: TCCAGCAGTGGTGTTGGTAATAGTGCGGACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTCTGTGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 72 bp | TCACAGAGCACCGAGCAAGGTGGGAGGAGGCCTGGCTaGTCCGCACTATTACCAACACCACTGCTGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQSTEQGGRRPG*SALLPTPLLDS Trigger: TGAGTCCAGCAGTGGTGTTGGTAATAGTGCGGACCAGCCAGGCCTCCTCCCACCTTGCTCGGTGCTCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 72 bp | AGCAAGAATAGCAGAATGCGATATTGTCTGCAGGGCTaGGATGCAGATGCTGGAGAGCTGGGCTCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKNSRMRYCLQG*DADAGELGSRA Trigger: AGCCCTGGAGCCCAGCTCTCCAGCATCTGCATCCCAGCCCTGCAGACAATATCGCATTCTGCTATTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS GCA 72 bp | GAACAAGTAGCAAGAATAGCAGAATGCGATATTGTCTaGAGGGCTGGGATGCAGATGCTGGAGAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EQVARIAECDIV*RAGMQMLESWA Trigger: AGCCCAGCTCTCCAGCATCTGCATCCCAGCCCTGCAGACAATATCGCATTCTGCTATTCTTGCTACTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CAA 72 bp | CACAGCCTATCATTTCCTTCCATGGATTTCTCACTGTaGTTCTCTACTCCCTCACCGGGAGCAGCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSLSFPSMDFSL*FSTPSPGAAVS Trigger: GGACACAGCTGCTCCCGGTGAGGGAGTAGAGAACAACAGTGAGAAATCCATGGAAGGAAATGATAGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CAA 90 bp | TTTGAGAGACACAGCCTATCATTTCCTTCCATGGATTTCTCACTGTaGTTCTCTACTCCCTCACCGGGAGCAGCTGTGTCCTCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FERHSLSFPSMDFSL*FSTPSPGAAVSSQS Trigger: GCTCTGTGAGGACACAGCTGCTCCCGGTGAGGGAGTAGAGAACAACAGTGAGAAATCCATGGAAGGAAATGATAGGCTGTGTCTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
||
| CDS CCA 72 bp | AAACCCCAGGAACCTTTCCTTAACCAAGACAGCACTTaGCGTCTTTTGTGGGTACCTCACACACACGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KPQEPFLNQDST*RLLWVPHTHGK Trigger: CTTTCCGTGTGTGTGAGGTACCCACAAAAGACGCCAAGTGCTGTCTTGGTTAAGGAAAGGTTCCTGGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS CAA 72 bp | GAACCTTTCCTTAACCAAGACAGCACTTGGCGTCTTTaGTGGGTACCTCACACACACGGAAAGCTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPFLNQDSTWRL*WVPHTHGKLSL Trigger: GAGAGACAGCTTTCCGTGTGTGTGAGGTACCCACAAAAGACGCCAAGTGCTGTCTTGGTTAAGGAAAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS GCA 72 bp | ATACTGCCGGTAAAATCGGAGCTCGGGAATGATGTCTaGATCAAGCTTATAGAATTCCTGGATGTGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILPVKSELGNDV*IKLIEFLDVLG Trigger: GCCAAGCACATCCAGGAATTCTATAAGCTTGATGCAGACATCATTCCCGAGCTCCGATTTTACCGGCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
||
| CDS CAA 72 bp | CTATTACCAACACCACTGCTGGACTCACTGGCTGAGTaGCTCATGATGACATCTGTCGGTAGAGAAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPTPLLDSLAE*LMMTSVGREES Trigger: ACTTTCTTCTCTACCGACAGATGTCATCATGAGCAACTCAGCCAGTGAGTCCAGCAGTGGTGTTGGTAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055013.10 ENSMUST00000106102.9 |
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| CDS TCA 72 bp | TTAAAATGTCTCTTGAGCAATTTAAGCACATCCTTTTaGGAGGAGCTGGAGACACAGCAGGTGACGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: LKCLLSNLSTSF*EELETQQVTGT Trigger: GGTACCCGTCACCTGCTGTGTCTCCAGCTCCTCTCAAAAGGATGTGCTTAAATTGCTCAAGAGACATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 ENSMUST00000136186.2 |
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| CDS TCA 72 bp | TCTCCTCGCAGATTATTGAAAAGGCTGAGGAGGCGTTaGTCTCACTCACGATGTCTTGCAACATTTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: SPRRLLKRLRRR*SHSRCLATFHP Trigger: AGGATGAAATGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTTTTCAATAATCTGCGAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CAA 72 bp | ATCTCCTCGCAGATTATTGAAAAGGCTGAGGAGGCGTaGATCTCACTCACGATGTCTTGCAACATTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ISSQIIEKAEEA*ISLTMSCNISS Trigger: GGATGAAATGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTTTTCAATAATCTGCGAGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CAA 90 bp | TCCTTTAGACTTAAAATGTCTCTTGAGCAATTTAAGCACATCCTTTaGAGAGGAGCTGGAGACACAGCAGGTGACGGGTACCCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFRLKMSLEQFKHIL*RGAGDTAGDGYPSM Trigger: CATTGATGGGTACCCGTCACCTGCTGTGTCTCCAGCTCCTCTCAAAAGGATGTGCTTAAATTGCTCAAGAGACATTTTAAGTCTAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 ENSMUST00000136186.2 |
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| CDS CAA 72 bp | GAAATTTCCCAGCATTTTCTCCCAGTCAGCAGTTCCTaGGGTTGCAAAAGCTTCTCTCCGACAGCTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: EISQHFLPVSSS*GCKSFSPTAKF Trigger: AAATTTAGCTGTCGGAGAGAAGCTTTTGCAACCCAAGGAACTGCTGACTGGGAGAAAATGCTGGGAAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CAA 90 bp | CTACCAGCTATCTCCTCGCAGATTATTGAAAAGGCTGAGGAGGCGTaGATCTCACTCACGATGTCTTGCAACATTTCATCCTTTATCATT | + |
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Preference number: 6 (lower is better) Translates to: LPAISSQIIEKAEEA*ISLTMSCNISSFII Trigger: AATGATAAAGGATGAAATGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTTTTCAATAATCTGCGAGGAGATAGCTGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CAA 90 bp | GCAGTTCCTTGGGTTGCAAAAGCTTCTCTCCGACAGCTAAATTTTTaGCTCATGATGACATCTGTCGGTAGAGAAGAAAGTGTACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: AVPWVAKASLRQLNF*LMMTSVGREESVPC Trigger: ACAAGGTACACTTTCTTCTCTACCGACAGATGTCATCATGAGCAAAAAATTTAGCTGTCGGAGAGAAGCTTTTGCAACCCAAGGAACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106099.8 |
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| CDS GCA 72 bp | AAGTCGTTAGTAATCGCAATCATCTCATCTGACAGCTaGAGTGATTTGCACGGGGAAGATCTAAGTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: KSLVIAIISSDS*SDLHGEDLSIL Trigger: CAGAATACTTAGATCTTCCCCGTGCAAATCACTGCAGCTGTCAGATGAGATGATTGCGATTACTAACGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | GGAATAGCATCGAGAAACTGGTATTGCCTCCAAAATTaGAGTGACTTTAAGTGCACGTCACTTTCTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: GIASRNWYCLQN*SDFKCTSLSSC Trigger: GCATGAAGAAAGTGACGTGCACTTAAAGTCACTGCAATTTTGGAGGCAATACCAGTTTCTCGATGCTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | AGTCTTTCAGGTTCCATCAGTTTATTTACCAGTTCCTaGTCAACAGCTATCAGAGCCAGGCTACTAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLSGSISLFTSS*STAIRARLLSF Trigger: GAAACTTAGTAGCCTGGCTCTGATAGCTGTTGAGCAGGAACTGGTAAATAAACTGATGGAACCTGAAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CCA 72 bp | AAATTTCCCAGCATTTTCTCCCAGTCAGCAGTTCCTTaGGTTGCAAAAGCTTCTCTCCGACAGCTAAATTTT | + |
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Preference number: 6 (lower is better) Translates to: KFPSIFSQSAVP*VAKASLRQLNF Trigger: AAAATTTAGCTGTCGGAGAGAAGCTTTTGCAACCCAAGGAACTGCTGACTGGGAGAAAATGCTGGGAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | AAGGCTGAGGAGGCGTTGATCTCACTCACGATGTCTTaGAACATTTCATCCTTTATCATTTCAATAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KAEEALISLTMS*NISSFIISIIS Trigger: GGAGATTATTGAAATGATAAAGGATGAAATGTTGCAAGACATCGTGAGTGAGATCAACGCCTCCTCAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS CCA 72 bp | ACAGATGAATTGTCACACGGAATAGCATCGAGAAACTaGTATTGCCTCCAAAATTGCAGTGACTTTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TDELSHGIASRN*YCLQNCSDFKC Trigger: GCACTTAAAGTCACTGCAATTTTGGAGGCAATACCAGTTTCTCGATGCTATTCCGTGTGACAATTCATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | AATTGCAGTGACTTTAAGTGCACGTCACTTTCTTCATaGTTTCTGAAATTTCCCAGCATTTTCTCCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: NCSDFKCTSLSS*FLKFPSIFSQS Trigger: TGACTGGGAGAAAATGCTGGGAAATTTCAGAAAGCATGAAGAAAGTGACGTGCACTTAAAGTCACTGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | AACTGGTATTGCCTCCAAAATTGCAGTGACTTTAAGTaGACGTCACTTTCTTCATGCTTTCTGAAATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: NWYCLQNCSDFK*TSLSSCFLKFP Trigger: GGGAAATTTCAGAAAGCATGAAGAAAGTGACGTGCACTTAAAGTCACTGCAATTTTGGAGGCAATACCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS TCA 72 bp | TTCGTGATACAAGGAATATTATTGTGGAGAGCATGCTaGATAAACAAAGAGCCTAGGTCAATGAAGCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: FVIQGILLWRAC*INKEPRSMKLK Trigger: CTTAAGCTTCATTGACCTAGGCTCTTTGTTTATTCAGCATGCTCTCCACAATAATATTCCTTGTATCACGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | CACATAGAGAGCTCTTGGCTCTTCCTTCTTGAATTCTaGTACAACTTCATTCAATTTTACCGTAAAATTTGT | + |
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Preference number: 6 (lower is better) Translates to: HIESSWLFLLEF*YNFIQFYRKIC Trigger: ACAAATTTTACGGTAAAATTGAATGAAGTTGTAGCAGAATTCAAGAAGGAAGAGCCAAGAGCTCTCTATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS TCA 72 bp | CCTTGTAAGAGATCAGTGTTCACGACCAGGTCAACATaGTTATTTACTAACGACATTATATTGCTTATAACT | + |
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Preference number: 6 (lower is better) Translates to: PCKRSVFTTRST*LFTNDIILLIT Trigger: AGTTATAAGCAATATAATGTCGTTAGTAAATAATCATGTTGACCTGGTCGTGAACACTGATCTCTTACAAGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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| CDS GCA 72 bp | TTATTTGCTGAAGTAATTGGCCAAGATAAAGCAATATaGAACAGCTTCGTGATACAAGGAATATTATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LFAEVIGQDKAI*NSFVIQGILLW Trigger: CCACAATAATATTCCTTGTATCACGAAGCTGTTGCATATTGCTTTATCTTGGCCAATTACTTCAGCAAATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055013.10 ENSMUST00000106099.8 ENSMUST00000106102.9 |
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