Pregenerated sensors for ZMPSTE24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043207Ensembl transcript IDs: ENSMUST00000058754.9, ENSMUST00000135788.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGATTACACTGTGGACTGAATGCCCAGGAGGCACTCGCTACCAGTaGCTGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGG | + |
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Preference number: 1 (lower is better) Translates to: SITLWTECPGGTRYQ*LGVAGAAGLSLRTW Trigger: CCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAGTGCCTCCTGGGCATTCAGTCCACAGTGTAATCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CCA 90 bp | TTACACTGTGGACTGAATGCCCAGGAGGCACTCGCTACCAGTGACTaGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: LHCGLNAQEALATSD*AWQAQQDSHLGRGQ Trigger: CTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAGTGCCTCCTGGGCATTCAGTCCACAGTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CCA 90 bp | TGTGGACTGAATGCCCAGGAGGCACTCGCTACCAGTGACTGGGCGTaGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTT | + |
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Preference number: 1 (lower is better) Translates to: CGLNAQEALATSDWA*QAQQDSHLGRGQTF Trigger: AAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAGTGCCTCCTGGGCATTCAGTCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 90 bp | GTGAAGGCATCGCAGATGCCTTGTCACTTGTCAGCAGAGTGCAGATaGCATAGTGTAGAGTCGATTACACTGTGGACTGAATGCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VKASQMPCHLSAECR*HSVESITLWTECPG Trigger: TCCTGGGCATTCAGTCCACAGTGTAATCGACTCTACACTATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 90 bp | ATGAAGTCACAGGAAAGGGTGCTGGAGAGAAACCGTGGGCTGCTCTaGGTAGCTGTAGGAAATAAACAATGCAGTGCTGAGTGTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: MKSQERVLERNRGLL*VAVGNKQCSAECEL Trigger: CAGCTCACACTCAGCACTGCATTGTTTATTTCCTACAGCTACGCAGAGCAGCCCACGGTTTCTCTCCAGCACCCTTTCCTGTGACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR TCA 90 bp | GTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTaGAGCAGTCAAGCACATACCTTTTCCCACTGGAAATCTTTTATG | + |
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Preference number: 1 (lower is better) Translates to: VAGAAGLSLRTWTDI*SSQAHTFSHWKSFM Trigger: CATAAAAGATTTCCAGTGGGAAAAGGTATGTGCTTGACTGCTTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CCA 90 bp | GCCTCTGCCTCAGTTGCTGAGATTAAATGTAAGTGCTACCAAGCCTaGTTTAAAATTAAGACCTTCTTAAAAGCAAACCCAAAGTCAATG | + |
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Preference number: 1 (lower is better) Translates to: ASASVAEIKCKCYQA*FKIKTFLKANPKSM Trigger: CATTGACTTTGGGTTTGCTTTTAAGAAGGTCTTAATTTTAAACCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGCTACCAGTGACTGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTTCAAGAGCCGGAACATaGTGCCAGGACAGAATAACC | + |
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Preference number: 2 (lower is better) Translates to: LATSDWAWQAQQDSHLGRSRAGT*CQDRIT Trigger: GGTTATTCTGTCCTGGCAGCATGTTCCGGCTCTTGA...ACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CAA 90 bp | GACGCTACTATGGTCCATGTGAAGGCATCGCAGATGCCTTGTCACTaGTCAGCAGAGTGCAGATGCCATAGTGTAGAGTCGATTACACTG | + |
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Preference number: 2 (lower is better) Translates to: DATMVHVKASQMPCH*SAECRCHSVESITL Trigger: CAGTGTAATCGACTCTACACTATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTTCACATGGACCATAGTAGCGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATGTAAGTGCTACCAAGCCTGGGAGGGAGGGAATTCCTaGTTGGTGTGGCAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PSASASVAEIKCKCYQAWEGGNS*LVWQER Trigger: TCTTTCTTGCCACACCAATCAGGAATTCCCTCCCTC...CCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTGAAGGCATCGCAGATGCCTTGTCACTTGTCAGCAGAGTGCAGATGCCATGTGGCAGCTCACAACTaGAATCCCAACATTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HVKASQMPCHLSAECRCHVAAHN*NPNIRK Trigger: CTTCCTAATGTTGGGATTGCAGTTGTGAGCTGCCAC...ATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTTCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGCACATACCTTTTCCCACTGGAAATCTTTTATGGCGCTTTCTCTGCAAGTCGACTGGCCTGGAACTTaGTATGTCGACCAGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QAHTFSHWKSFMALSLQVDWPGT*YVDQAW Trigger: CCAAGCCTGGTCGACATAGCAAGTTCCAGGCCAGTC...GACTTGCAGAGAAAGCGCCATAAAAGATTTCCAGTGGGAAAAGGTATGTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATGAGGGAATTCCTGATTaGTGTGGCAAGAAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LGLSSQVHLPLPQLLRLNEGIPD*CGKKEN Trigger: GTTCTCTTTCTTGCCACACCAATCAGGAATTCCCTC...ATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CAA 90 bp | ACCAGGCTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTaGCTGAGATTAAATGTAAGTGCTACCAAGCCTGGTTTAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: TRLGLSSQVHLPLPQ*LRLNVSATKPGLKL Trigger: TAATTTTAAACCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAGCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATCCACCTTTGAACTTATaGCCTAAAACCCTCTATGCA | + |
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Preference number: 2 (lower is better) Translates to: LGLSSQVHLPLPQLLRLNPPLNL*PKTLYA Trigger: TGCATAGAGGGTTTTAGGTCATAAGTTCAAAGGTGG...ATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAAGGCATCGCAGATGCCTTGTCACTTGTCAGCAGAGTGCAGATGCCATCATACCTTTTCCCACTaGAAATCTTTTATGGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: HVKASQMPCHLSAECRCHHTFSH*KSFMAL Trigger: AAGCGCCATAAAAGATTTCCAGTGGGAAAAGGTATG...ATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTTCACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGCACATACCTTTTCCCACTGGAAATCTTTTATGGCGCTTTCTCTGCAAGTCTTTAAGACCCCAGTTTaGCTGGCCTGGAACTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QAHTFSHWKSFMALSLQVFKTPV*LAWNLL Trigger: TAGCAAGTTCCAGGCCAGTCAAACTGGGGTCTTAAA...GACTTGCAGAGAAAGCGCCATAAAAGATTTCCAGTGGGAAAAGGTATGTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAGAGAACAGAATGCTTTGTAACTATGACAGTATAGCATGCCTAACAACTACTCTGTTTCTGCTTTaGAAAAAGTGCTTGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KKENRMLCNYDSIACLTTTLFLL*KKCLEV Trigger: CACCTCCAAGCACTTTTTGCAAAGCAGAAACAGAGT...AGTTGTTAGGCATGCTATACTGTCATAGTTACAAAGCATTCTGTTCTCTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CCA 72 bp | GGACTGAATGCCCAGGAGGCACTCGCTACCAGTGACTaGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLNAQEALATSD*AWQAQQDSHLG Trigger: TCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAGTGCCTCCTGGGCATTCAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR CAA 90 bp | CTCGCTACCAGTGACTGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTCTTTGCAAAAAGTGCTaGGAGGTGATGCTTCCACCT | + |
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Preference number: 3 (lower is better) Translates to: LATSDWAWQAQQDSHLGRLCKKC*EVMLPP Trigger: AGGTGGAAGCATCACCTCCAAGCACTTTTTGCAAAG...ACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR-3UTR CAA 90 bp | CTCGCTACCAGTGACTGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTCTGCCTCTGCCTCAGTaGCTGAGATTAAATGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LATSDWAWQAQQDSHLGRLPLPQ*LRLNVS Trigger: ACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAG...ACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCAGTCACTGGTAGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 72 bp | AAGGCATCGCAGATGCCTTGTCACTTGTCAGCAGAGTaGAGATGCCATAGTGTAGAGTCGATTACACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: KASQMPCHLSAE*RCHSVESITLW Trigger: CCACAGTGTAATCGACTCTACACTATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR TCA 72 bp | ATGGACTTTTACTCTACCACCTTTAAGACCCCAGTTTaGCTGGCCTGGAACTTGCTATGTCGACCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: MDFYSTTFKTPV*LAWNLLCRPGL Trigger: CAAGCCTGGTCGACATAGCAAGTTCCAGGCCAGTCAAACTGGGGTCTTAAAGGTGGTAGAGTAAAAGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 72 bp | TTAACAATTCCTAAGCGATATGTGGCAGCTCACAACTaGAATCCCAACATTAGGAAGACTGAGGCAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LTIPKRYVAAHN*NPNIRKTEAGG Trigger: GCCTCCTGCCTCAGTCTTCCTAATGTTGGGATTGCAGTTGTGAGCTGCCACATATCGCTTAGGAATTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CCA 72 bp | GTAGGTAAAAACAAATTCCATGTAGGTACAGCGCAGTaGTTTGGGACCACTCTGTTTCTGCTTTGCAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: VGKNKFHVGTAQ*FGTTLFLLCKK Trigger: CTTTTTGCAAAGCAGAAACAGAGTGGTCCCAAACCACTGCGCTGTACCTACATGGAATTTGTTTTTACCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 72 bp | TCTGCCTCTGCCTCAGTTGCTGAGATTAAATGTAAGTaGTACCAAGCCTGGTTTAAAATTAAGACCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: SASASVAEIKCK*YQAWFKIKTFL Trigger: TAAGAAGGTCTTAATTTTAAACCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR GCA 72 bp | GAGAACAGAATGCTTTGTAACTATGACAGTATAGCATaGCTAACAACTCATTTCAGTAGCATTAGCCTTACT | + |
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Preference number: 3 (lower is better) Translates to: ENRMLCNYDSIA*LTTHFSSISLT Trigger: AGTAAGGCTAATGCTACTGAAATGAGTTGTTAGGCATGCTATACTGTCATAGTTACAAAGCATTCTGTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | TGTCGACCAGGCTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCGCAGAACTACAGAACTaGCCAGAAAGTCTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CRPGLALAHRSICLCLSCAELQN*PESLQR Trigger: CCTCTGGAGACTTTCTGGGCAGTTCTGTAGTTCTGC...GCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAGCCTGGTCGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | TGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTGAAACGTGTCCGAATCCATaGTCTGTTCTAACTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAWQAQQDSHLGRGQTFETCPNP*SVLTLL Trigger: CAGCAGAGTTAGAACAGATCATGGATTCGGACACGT...TTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CCA 90 bp | TGTCGACCAGGCTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCATGCCAGACTCCTCCTaGTTGTCTTTGTTTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: CRPGLALAHRSICLCLSCMPDSS*LSLFGT Trigger: TGTACCAAACAAAGACAACCAGGAGGAGTCTGGCAT...GCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAGCCTGGTCGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | TGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTGAAAACTCCAAAGTCTGGTaGTTGAAGCCATGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: WAWQAQQDSHLGRGQTFENSKVW*LKPCFS Trigger: AGAAAAGCATGGCTTCAATCACCAGACTTTGGAGTT...TTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | AGAAACCGTGGGCTGCTCTGCGTAGCTGTAGGAAATAAACAATGCAGTGCTGAGCCTCCGGTAGAGGTGTaGATTTGTCAAACAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RNRGLLCVAVGNKQCSAEPPVEV*ICQTEG Trigger: CCCCTCTGTTTGACAAATTCACACCTCTACCGGAGG...CTCAGCACTGCATTGTTTATTTCCTACAGCTACGCAGAGCAGCCCACGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CCA 90 bp | TGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTGAAGCAGTCAGAGTCCGATCAGAGTaGGTTGGCTGTCATAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: WQAQQDSHLGRGQTFEAVRVRSE*VGCHKN Trigger: GTTTTTATGACAGCCAACCCACTCTGATCGGACTCT...GACTGCTTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CAA 72 bp | GGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTaGCTGAGATTAAATGTAAGTGCTACCAAGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLSSQVHLPLPQ*LRLNVSATKPG Trigger: ACCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CAA 72 bp | ATGGTCCATGTGAAGGCATCGCAGATGCCTTGTCACTaGTCAGCAGAGTGCAGATGCCATAGTGTAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: MVHVKASQMPCH*SAECRCHSVES Trigger: CGACTCTACACTATGGCATCTGCACTCTGCTGACAAGTGACAAGGCATCTGCGATGCCTTCACATGGACCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | GGGACCACTCTGTTTCTGCTTTGCAAAAAGTGCTTGGAGGTGATGCTTCCACCTGCATTTTTCAGAGCCTaGAGCCTCTCTAGAAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GTTLFLLCKKCLEVMLPPAFFRA*SLSRSG Trigger: TCCGCTTCTAGAGAGGCTTCAGGCTCTGAAAAATGC...AGGTGGAAGCATCACCTCCAAGCACTTTTTGCAAAGCAGAAACAGAGTGGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | TGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTGAAGCAGTCATCACTTCAATTTCCTaGTTAAGCTTTCCCTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: WQAQQDSHLGRGQTFEAVITSIS*LSFPSG Trigger: ACCGGAGGGAAAGCTTAAGCAGGAAATTGAAGTGAT...GACTGCTTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | GGGACCACTCTGTTTCTGCTTTGCAAAAAGTGCTTGGAGGTGATGCTTCCACCTGCAAACGCATCAGCTTaGAATTCAAATCTGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GTTLFLLCKKCLEVMLPPANASA*NSNLRL Trigger: GAGCCGCAGATTTGAATTTCAAGCTGATGCGTTTGC...AGGTGGAAGCATCACCTCCAAGCACTTTTTGCAAAGCAGAAACAGAGTGGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | CGTGGGCTGCTCTGCGTAGCTGTAGGAAATAAACAATGCAGTGCTGAGTGTGAGCTTGAAATTCAAATCTaGGGCTCAGGACTGTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGLLCVAVGNKQCSAECELEIQI*GSGLLG Trigger: GCCTAACAGTCCTGAGCCGCAGATTTGAATTTCAAG...CTCACACTCAGCACTGCATTGTTTATTTCCTACAGCTACGCAGAGCAGCCCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| 3UTR CAA 72 bp | TACAGCGCAGTGGTTTGGGACCACTCTGTTTCTGCTTaGCAAAAAGTGCTTGGAGGTGATGCTTCCACCTTT | + |
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Preference number: 4 (lower is better) Translates to: YSAVVWDHSVSA*QKVLGGDASTF Trigger: AAAGGTGGAAGCATCACCTCCAAGCACTTTTTGCAAAGCAGAAACAGAGTGGTCCCAAACCACTGCGCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CCA 90 bp | CCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATGTAAGTGCTACCAAGCCTGGCCTTCCCAAGTTTCTTaGCAAACGCATCAGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PSASASVAEIKCKCYQAWPSQVS*QTHQLE Trigger: TTCAAGCTGATGCGTTTGCCAAGAAACTTGGGAAGG...CCAGGCTTGGTAGCACTTACATTTAATCTCAGCAACTGAGGCAGAGGCAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | AAAAACATCAAGAGCCGGAACATGCTGCCAGGACAGAATAACCGGAAGAGCATCGTCCTGACCAGAAGCTaGAGGTACTTTTATCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: KNIKSRNMLPGQNNRKSIVLTRS*RYFYPV Trigger: AACTGGATAAAAGTACCTTCAGCTTCTGGTCAGGAC...GATGCTCTTCCGGTTATTCTGTCCTGGCAGCATGTTCCGGCTCTTGATGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR TCA 90 bp | CTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATCCAAAGTCTGGTGATTaGAGCCATGCTTTTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LGLSSQVHLPLPQLLRLNPKSGD*SHAFLL Trigger: TAGAAGAAAAGCATGGCTTCAATCACCAGACTTTGG...ATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CCA 90 bp | AGCGCAGTGGTTTGGGACCACTCTGTTTCTGCTTTGCAAAAAGTGCTTGGAGGTAATGATCTCGTATTCTaGTCCAAAGCCAGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SAVVWDHSVSALQKVLGGNDLVF*SKASRT Trigger: AGTTCTGCTGGCTTTGGACCAGAATACGAGATCATT...ACCTCCAAGCACTTTTTGCAAAGCAGAAACAGAGTGGTCCCAAACCACTGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | CAAGCACATACCTTTTCCCACTGGAAATCTTTTATGGCGCTTTCTCTGCAAGTCTTGTATATCCTTCTCTaGCGCTGTGCTAGGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QAHTFSHWKSFMALSLQVLYILL*RCARKV Trigger: GACCTTCCTAGCACAGCGGCAGAGAAGGATATACAA...GACTTGCAGAGAAAGCGCCATAAAAGATTTCCAGTGGGAAAAGGTATGTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | AAGAAAGAGAACAGAATGCTTTGTAACTATGACAGTATAGCATGCCTAACAACTCCCCTTCACCTTCATTaGGGGCTTCCATGCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: KKENRMLCNYDSIACLTTPLHLH*GLPCQT Trigger: AGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGG...AGTTGTTAGGCATGCTATACTGTCATAGTTACAAAGCATTCTGTTCTCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR GCA 90 bp | AAGAAAGAGAACAGAATGCTTTGTAACTATGACAGTATAGCATGCCTAACAACTGAAGTCAATACTCTTTaGCATCACTTCAATTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KKENRMLCNYDSIACLTTEVNTL*HHFNFL Trigger: CAGGAAATTGAAGTGATGGCAAAGAGTATTGACTTC...AGTTGTTAGGCATGCTATACTGTCATAGTTACAAAGCATTCTGTTCTCTTTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | TGGGCGTGGCAGGCGCAGCAGGACTCTCACTTAGGACGTGGACAGACATTTGAATCCTCCTGGTTGTCTTaGTTTGGTACAGAGTACTCT | + |
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Preference number: 5 (lower is better) Translates to: WAWQAQQDSHLGRGQTFESSWLS*FGTEYS Trigger: AGAGTACTCTGTACCAAACAAAGACAACCAGGAGGA...TTCAAATGTCTGTCCACGTCCTAAGTGAGAGTCCTGCTGCGCCTGCCACGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | TGTCGACCAGGCTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCAATCCCAGGTTATCTTaGTTCAGCTTGATCAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: CRPGLALAHRSICLCLSCNPRLS*FSLIKA Trigger: TGCTTTGATCAAGCTGAACAAAGATAACCTGGGATT...GCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAGCCTGGTCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CCA 90 bp | CTGTCCCCTTCACCTTCATTGCGGGCTTCCATGCCAGACTCCTCCTaGTTGTCTTTGTTTGGTACAGAGTACTCTTCTAGTAGAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LSPSPSLRASMPDSS*LSLFGTEYSSSRVS Trigger: TGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | AGAAACCGTGGGCTGCTCTGCGTAGCTGTAGGAAATAAACAATGCAGTGCTGAGCCAGACTCCTCCTGGTaGTCTTTGTTTGGTACAGAG | + |
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Preference number: 5 (lower is better) Translates to: RNRGLLCVAVGNKQCSAEPDSSW*SLFGTE Trigger: CTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGG...CTCAGCACTGCATTGTTTATTTCCTACAGCTACGCAGAGCAGCCCACGGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS GCA 90 bp | CTTTTACTTCTTCACTGTCCCCTTCACCTTCATTGCGGGCTTCCATaGCAGACTCCTCCTGGTTGTCTTTGTTTGGTACAGAGTACTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLLLHCPLHLHCGLP*QTPPGCLCLVQSTL Trigger: AAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGACAGTGAAGAAGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | AAAACATCAAGAGCCGGAACATGCTGCCAGGACAGAATAACCGGAAGAGCATCCGGTAGAGGTGTGAATTaGTCAAACAGAGGGGCAATA | + |
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Preference number: 5 (lower is better) Translates to: KTSRAGTCCQDRITGRASGRGVN*SNRGAI Trigger: TATTGCCCCTCTGTTTGACAAATTCACACCTCTACC...GGATGCTCTTCCGGTTATTCTGTCCTGGCAGCATGTTCCGGCTCTTGATGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | CTTGGCCTTAGCTCACAGGTCCATCTGCCTCTGCCTCAGTTGCTGAGATTAAATCCTGGTTGTCTTTGTTaGGTACAGAGTACTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: LGLSSQVHLPLPQLLRLNPGCLC*VQSTLL Trigger: TAGAAGAGTACTCTGTACCAAACAAAGACAACCAGG...ATTTAATCTCAGCAACTGAGGCAGAGGCAGATGGACCTGTGAGCTAAGGCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS GCA 90 bp | CCTTCCCAAGTTTCTTGGCAAACGCATCAGCTTGAAATTCAAATCTaGGGCTCAGGACTGTTAGGCAGAAAGACAGAACCTCATTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: PSQVSWQTHQLEIQI*GSGLLGRKTEPHCK Trigger: CTTACAATGAGGTTCTGTCTTTCTGCCTAACAGTCCTGAGCCGCAGATTTGAATTTCAAGCTGATGCGTTTGCCAAGAAACTTGGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAACAGAATGCTTTGTAACTATGACAGTATAGCATGCCTAACAACTTCCCCTTCACCTTCATaGCGGGCTTCCATGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: KKENRMLCNYDSIACLTTSPSPS*RASMPD Trigger: GTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGA...AGTTGTTAGGCATGCTATACTGTCATAGTTACAAAGCATTCTGTTCTCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 90 bp | TATAAGTCTTTAGCCTTCCCAAGTTTCTTGGCAAACGCATCAGCTTaGAATTCAAATCTGCGGCTCAGGACTGTTAGGCAGAAAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: YKSLAFPSFLANASA*NSNLRLRTVRQKDR Trigger: TCTGTCTTTCTGCCTAACAGTCCTGAGCCGCAGATTTGAATTTCAAGCTGATGCGTTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 90 bp | ATGAATCAGTGCCTTCCACCTCTGAGTAGAGTCCTGACCAGAAGCTaGAGGTACTTTTATCCAGTTGATACAATCGAGATTTCTCAAACG | + |
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Preference number: 5 (lower is better) Translates to: MNQCLPPLSRVLTRS*RYFYPVDTIEISQT Trigger: CGTTTGAGAAATCTCGATTGTATCAACTGGATAAAAGTACCTTCAGCTTCTGGTCAGGACTCTACTCAGAGGTGGAAGGCACTGATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135788.2 |
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| CDS TCA 90 bp | TATCCAGTTGATACAATCGAGATTTCTCAAACGTGTCCGAATCCATaGTCTGTTCTAACTCTGCTGGTACGCGAGTCGTCGTTTTGTATA | + |
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Preference number: 5 (lower is better) Translates to: YPVDTIEISQTCPNP*SVLTLLVRESSFCI Trigger: TATACAAAACGACGACTCGCGTACCAGCAGAGTTAGAACAGATCATGGATTCGGACACGTTTGAGAAATCTCGATTGTATCAACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS-3UTR CAA 90 bp | ACATACCTTTTCCCACTGGAAATCTTTTATGGCGCTTTCTCTGCAAGTCAACATGTGAATAGTGCCATGTaGAAAACAACCAGTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: TYLFPLEIFYGAFSASQHVNSAM*KTTSQK Trigger: TTTCTGACTGGTTGTTTTCAACATGGCACTATTCAC...ATGTTGACTTGCAGAGAAAGCGCCATAAAAGATTTCCAGTGGGAAAAGGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS GCA 72 bp | CTTCACTGTCCCCTTCACCTTCATTGCGGGCTTCCATaGCAGACTCCTCCTGGTTGTCTTTGTTTGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LHCPLHLHCGLP*QTPPGCLCLVQ Trigger: CTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGACAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 72 bp | TATTGTACAGACTCCAGGGCAAGCCAGTCAGTGCACTaGAGAGTGTGGCCAACAGCAGGAACACCAATGACT | + |
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Preference number: 6 (lower is better) Translates to: YCTDSRASQSVH*RVWPTAGTPMT Trigger: AGTCATTGGTGTTCCTGCTGTTGGCCACACTCTTCAGTGCACTGACTGGCTTGCCCTGGAGTCTGTACAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS CAA 72 bp | GCCTCTCTAGAAGCGGAGGGTGTGAATAGTGCCATGTaGAAAACAACCAGTCAGAAACCGGGAATCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASLEAEGVNSAM*KTTSQKPGIPG Trigger: ACCTGGGATTCCCGGTTTCTGACTGGTTGTTTTCAACATGGCACTATTCACACCCTCCGCTTCTAGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 72 bp | TGCACTGAAGAGTGTGGCCAACAGCAGGAACACCAATaGCTGAATGATCTCGTATTCTGGTCCAAAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CTEECGQQQEHQ*LNDLVFWSKAS Trigger: GCTGGCTTTGGACCAGAATACGAGATCATTCAGTCATTGGTGTTCCTGCTGTTGGCCACACTCTTCAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS GCA 72 bp | AAAAGTATTGTACAGACTCCAGGGCAAGCCAGTCAGTaGACTGAAGAGTGTGGCCAACAGCAGGAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: KSIVQTPGQASQ*TEECGQQQEHQ Trigger: TTGGTGTTCCTGCTGTTGGCCACACTCTTCAGTGCACTGACTGGCTTGCCCTGGAGTCTGTACAATACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS CAA 72 bp | ATCTGTTCTAACTCTGCTGGTACGCGAGTCGTCGTTTaGTATATCCTTCTCTGCCGCTGTGCTAGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ICSNSAGTRVVV*YILLCRCARKV Trigger: GACCTTCCTAGCACAGCGGCAGAGAAGGATATACAAAACGACGACTCGCGTACCAGCAGAGTTAGAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 72 bp | TTAGCTTTTACTTCTTCACTGTCCCCTTCACCTTCATaGCGGGCTTCCATGCCAGACTCCTCCTGGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LAFTSSLSPSPS*RASMPDSSWLS Trigger: AGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGACAGTGAAGAAGTAAAAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 90 bp | TCCCCTTCACCTTCATTGCGGGCTTCCATGCCAGACTCCTCCTGGTaGTCTTTGTTTGGTACAGAGTACTCTTCTAGTAGAGTGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SPSPSLRASMPDSSW*SLFGTEYSSSRVSN Trigger: GTTTGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 90 bp | GAGCCTGAAGCCTCTCTAGAAGCGGAGGGTGTGAATAGTGCCATGTaGAAAACAACCAGTCAGAAACCGGGAATCCCAGGTTATCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: EPEASLEAEGVNSAM*KTTSQKPGIPGYLC Trigger: ACAAAGATAACCTGGGATTCCCGGTTTCTGACTGGTTGTTTTCAACATGGCACTATTCACACCCTCCGCTTCTAGAGAGGCTTCAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 72 bp | TTGCGGGCTTCCATGCCAGACTCCTCCTGGTTGTCTTaGTTTGGTACAGAGTACTCTTCTAGTAGAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRASMPDSSWLS*FGTEYSSSRVS Trigger: TGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 72 bp | CCTTCATTGCGGGCTTCCATGCCAGACTCCTCCTGGTaGTCTTTGTTTGGTACAGAGTACTCTTCTAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PSLRASMPDSSW*SLFGTEYSSSR Trigger: TCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 72 bp | GATACAATCGAGATTTCTCAAACGTGTCCGAATCCATaGTCTGTTCTAACTCTGCTGGTACGCGAGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: DTIEISQTCPNP*SVLTLLVRESS Trigger: CGACGACTCGCGTACCAGCAGAGTTAGAACAGATCATGGATTCGGACACGTTTGAGAAATCTCGATTGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS TCA 72 bp | TTAGCCTTCCCAAGTTTCTTGGCAAACGCATCAGCTTaGAATTCAAATCTGCGGCTCAGGACTGTTAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LAFPSFLANASA*NSNLRLRTVRQ Trigger: CTGCCTAACAGTCCTGAGCCGCAGATTTGAATTTCAAGCTGATGCGTTTGCCAAGAAACTTGGGAAGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 72 bp | GGGCTTCCATGCCAGACTCCTCCTGGTTGTCTTTGTTaGGTACAGAGTACTCTTCTAGTAGAGTGTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: GLPCQTPPGCLC*VQSTLLVECQT Trigger: TGTTTGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 90 bp | TCACCTTCATTGCGGGCTTCCATGCCAGACTCCTCCTGGTTGTCTTaGTTTGGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACT | + |
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Preference number: 6 (lower is better) Translates to: SPSLRASMPDSSWLS*FGTEYSSSRVSNKT Trigger: AGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 90 bp | CTTCATTGCGGGCTTCCATGCCAGACTCCTCCTGGTTGTCTTTGTTaGGTACAGAGTACTCTTCTAGTAGAGTGTCAAACAAAACTATTC | + |
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Preference number: 6 (lower is better) Translates to: LHCGLPCQTPPGCLC*VQSTLLVECQTKLF Trigger: GAATAGTTTTGTTTGACACTCTACTAGAAGAGTACTCTGTACCAAACAAAGACAACCAGGAGGAGTCTGGCATGGAAGCCCGCAATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS TCA 72 bp | AGTCCTGACCAGAAGCTGAAGGTACTTTTATCCAGTTaGTACAATCGAGATTTCTCAAACGTGTCCGAATCC | + |
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Preference number: 6 (lower is better) Translates to: SPDQKLKVLLSS*YNRDFSNVSES Trigger: GGATTCGGACACGTTTGAGAAATCTCGATTGTATCAACTGGATAAAAGTACCTTCAGCTTCTGGTCAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058754.9 ENSMUST00000135788.2 |
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| CDS CAA 90 bp | CATGTTGAAAACAACCAGTCAGAAACCGGGAATCCCAGGTTATCTTaGTTCAGCTTGATCAAAGCAGAATATAAGTCTTTAGCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HVENNQSETGNPRLS*FSLIKAEYKSLAFP Trigger: TGGGAAGGCTAAAGACTTATATTCTGCTTTGATCAAGCTGAACAAAGATAACCTGGGATTCCCGGTTTCTGACTGGTTGTTTTCAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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| CDS CAA 72 bp | AACAACCAGTCAGAAACCGGGAATCCCAGGTTATCTTaGTTCAGCTTGATCAAAGCAGAATATAAGTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NNQSETGNPRLS*FSLIKAEYKSL Trigger: TAAAGACTTATATTCTGCTTTGATCAAGCTGAACAAAGATAACCTGGGATTCCCGGTTTCTGACTGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058754.9 |
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