Pregenerated sensors for ZMAT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009076Ensembl transcript IDs: ENSMUST00000009220.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTTCTCACCCATCTTCTTGAGAAACGCCCTGAGGGATaGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: FLTHLLEKRPEG*WVDGRPGSEAP Trigger: TGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAAGAAGATGGGTGAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGCTAGGGGCCATTCTCTaGCCCGCCTCTCCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RNALRDGGWMGGQAQRPQLGAIL*PASPLP Trigger: TGGAAGAGGAGAGGCGGGCCAGAGAATGGCCCCTAG...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGCTCTCCTCTTCCACCTaGACGCTCAGCTCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RNALRDGGWMGGQAQRPQLSSST*TLSSCR Trigger: TCTGCAGGAGCTGAGCGTCCAGGTGGAAGAGGAGAG...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGAGCCCCACTGGACTTTaGACAGTACGGACCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: RNALRDGGWMGGQAQRPQSPTGL*TVRTTL Trigger: GAGGGTGGTCCGTACTGTCCAAAGTCCAGTGGGGCT...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCTGGCGGCCAGCCCACTaGATACTGGAAGACAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRNALRDGGWMGGQAQRPWRPAH*ILEDSG Trigger: ACCACTGTCTTCCAGTATCCAGTGGGCTGGCCGCCA...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGGAGCCAAAGTCGCACTaGCCTGTCAGCAGGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: RNALRDGGWMGGQAQRPQEPKSH*PVSRNF Trigger: GAAATTCCTGCTGACAGGCCAGTGCGACTTTGGCTC...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCGGGAAAACCTGCAGTTaGAGCCAAAGTCGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRNALRDGGWMGGQAQRPGKTCS*SQSRTG Trigger: GCCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCC...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | GAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCATGCAGTCCATTCAGGTaGTTCTTTCGGTTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKRPEGWWVDGRPGSEAPCSPFR*FFRLWR Trigger: CCTCCACAACCGAAAGAAGCACCTGAATGGACTGCA...TGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR TCA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGCTGCAGATCTTGTTCTaGCATGTGGGAAAACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNALRDGGWMGGQAQRPQLQILF*HVGKPA Trigger: TGCAGGTTTTCCCACATGTCAGAACAAGATCTGCAG...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | CTTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCTGCTTCTTTCGGTTGTaGAGGTTGTCCTGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LEKRPEGWWVDGRPGSEACFFRL*RLSWKE Trigger: CTCCTTCCAGGACAACCTCCACAACCGAAAGAAGCA...GGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCGTTCATCCAGCAAGATaGCAGCTGCATCTCGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LRNALRDGGWMGGQAQRPVHPAR*QLHLGT Trigger: TGTTCCGAGATGCAGCTGCCATCTTGCTGGATGAAC...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AACATTCGGATGTTTCTCACCCATCTTCTTGAGAAACGCCCTGAGGGATGGTGGGGACCACCCTCCAGGTaGGGGTGCCCGCAGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NIRMFLTHLLEKRPEGWWGPPSR*GCPQGG Trigger: CCCTCCCTGCGGGCACCCCCACCTGGAGGGTGGTCC...CCACCATCCCTCAGGGCGTTTCTCAAGAAGATGGGTGAGAAACATCCGAATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACAGCCAGTCCTCCAGGTaGCCCTCAGGAAGCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: REKGGKAALLPRLGNCLYSQSSR*PSGSSA Trigger: CGCCGAGCTTCCTGAGGGCCACCTGGAGGACTGGCT...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCTCTTGTTCTGACATGTaGGAAAACCTGCAGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRNALRDGGWMGGQAQRPSCSDM*ENLQLE Trigger: CTCCAACTGCAGGTTTTCCCACATGTCAGAACAAGA...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | GAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTGGGCAGCTCCTGCATTaGCGGCCAGCCCACTGGATA | + |
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Preference number: 4 (lower is better) Translates to: EKGGKAALLPRLGNCLYCGQLLH*RPAHWI Trigger: TATCCAGTGGGCTGGCCGCCAATGCAGGAGCTGCCC...ACAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR TCA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACGGAAGACAGTGGTTCTaGTGGGTTCAGCCCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: REKGGKAALLPRLGNCLYGRQWF*WVQPCY Trigger: GTAGCAGGGCTGAACCCATCAGAACCACTGTCTTCC...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTTCTTGGCCTTGAGGTaGTGCAGTCCATTCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: REKGGKAALLPRLGNCLYFLALR*CSPFRC Trigger: GCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAA...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTTTGGCCTTGAGGTGCTaGAGTCCATTCAGGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EKGGKAALLPRLGNCLYCLALRC*SPFRCF Trigger: GAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAA...ACAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACACATGTGGGAAAACCTaGAGTTGGAGCCAAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: REKGGKAALLPRLGNCLYTCGKT*SWSQSR Trigger: GCGACTTTGGCTCCAACTGCAGGTTTTCCCACATGT...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTCAGCAAGATGGCAGCTaGATCTCGGAACATGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: EKGGKAALLPRLGNCLYCQQDGS*ISEHVV Trigger: TACGACATGTTCCGAGATGCAGCTGCCATCTTGCTG...ACAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTTGGACGCTCAGCTCCTaGAGATCTTGTTCTGACATG | + |
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Preference number: 4 (lower is better) Translates to: EKGGKAALLPRLGNCLYCWTLSS*RSCSDM Trigger: CATGTCAGAACAAGATCTGCAGGAGCTGAGCGTCCA...ACAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR GCA 90 bp | AACATTCGGATGTTTCTCACCCATCTTCTTGAGAAACGCCCTGAGGGATGGTGGTCAGCAGGAATTTCCTaGAGGGCCGCTTGTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NIRMFLTHLLEKRPEGWWSAGIS*RAACSV Trigger: AACAGAACAAGCGGCCCTGCAGGAAATTCCTGCTGA...CCACCATCCCTCAGGGCGTTTCTCAAGAAGATGGGTGAGAAACATCCGAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CCA 90 bp | AACATTCGGATGTTTCTCACCCATCTTCTTGAGAAACGCCCTGAGGGATGGTGGCAGCCCACTGGATACTaGAAGACAGTGGTTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: NIRMFLTHLLEKRPEGWWQPTGY*KTVVLM Trigger: CATCAGAACCACTGTCTTCCAGTATCCAGTGGGCTG...CCACCATCCCTCAGGGCGTTTCTCAAGAAGATGGGTGAGAAACATCCGAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCGGGGCAGCTCCTGCATaGGCGGCCAGCCCACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LRNALRDGGWMGGQAQRPGAAPA*AASPLD Trigger: ATCCAGTGGGCTGGCCGCCAATGCAGGAGCTGCCCC...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGCAGCCCCACTGGACTTaGGACAGTACGGACCACCCT | + |
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Preference number: 5 (lower is better) Translates to: RNALRDGGWMGGQAQRPQQPHWT*DSTDHP Trigger: AGGGTGGTCCGTACTGTCCAAAGTCCAGTGGGGCTG...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | AGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCCAGTGGGAAAACCTGCAGTaGGAGCCAAAGTCGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: RNALRDGGWMGGQAQRPQWENLQ*EPKSHW Trigger: CCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCCA...CTGGGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | TTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCCTTTCGGTTGTGGAGGTaGTCCTGGAAGGAGCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LRNALRDGGWMGGQAQRPFRLWR*SWKERS Trigger: TGACCGCTCCTTCCAGGACAACCTCCACAACCGAAA...GGGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAACGCCCTGAGGGATGGTGGGTGGATGGGCGGCCAGGCTCAGAGGCCAGGTGCTTCTTTCGGTaGTGGAGGTTGTCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LEKRPEGWWVDGRPGSEARCFFR*WRLSWK Trigger: CTTCCAGGACAACCTCCACAACCGAAAGAAGCACCT...GGCCTCTGAGCCTGGCCGCCCATCCACCCACCATCCCTCAGGGCGTTTCTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CCA 90 bp | GCGGTCTCTAGGGGCCATTCTCTGGCCCGCCTCTCCTCTTCCACCTaGACGCTCAGCTCCTGCAGATCTTGTTCTGACATGTGGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: AVSRGHSLARLSSST*TLSSCRSCSDMWEN Trigger: GTTTTCCCACATGTCAGAACAAGATCTGCAGGAGCTGAGCGTCCAGGTGGAAGAGGAGAGGCGGGCCAGAGAATGGCCCCTAGAGACCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGGTTCAGCCCTGCTACTaGGGGCTGAGCTTAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GEGREGSSASSVRQLSLLVQPCY*GLSLAS Trigger: AGAGGCTAAGCTCAGCCCCAAGTAGCAGGGCTGAAC...CAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS TCA 90 bp | TGGCAGCTGCATCTCGGAACATGTCGTACCACACCTTCTTGGCCTTaGGGTGCTGCAGTCCATTCAGGTGCTTCTTTCGGTTGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: WQLHLGTCRTTPSWP*GAAVHSGASFGCGG Trigger: ACCTCCACAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGCAGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS GCA 90 bp | GCATCTCGGAACATGTCGTACCACACCTTCTTGGCCTTGAGGTGCTaGAGTCCATTCAGGTGCTTCTTTCGGTTGTGGAGGTTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASRNMSYHTFLALRC*SPFRCFFRLWRLSW Trigger: CCAGGACAACCTCCACAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS GCA 90 bp | GCTGCATCTCGGAACATGTCGTACCACACCTTCTTGGCCTTGAGGTaGTGCAGTCCATTCAGGTGCTTCTTTCGGTTGTGGAGGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: AASRNMSYHTFLALR*CSPFRCFFRLWRLS Trigger: GGACAACCTCCACAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS GCA 90 bp | GGACGCTCAGCTCCTGCAGATCTTGTTCTGACATGTGGGAAAACCTaGAGTTGGAGCCAAAGTCGCACTGGCCTGTCAGCAGGAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: GRSAPADLVLTCGKT*SWSQSRTGLSAGIS Trigger: GGAAATTCCTGCTGACAGGCCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCCACATGTCAGAACAAGATCTGCAGGAGCTGAGCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACCACACCTTCTTGGCCTaGAGGTGCTGCAGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: REKGGKAALLPRLGNCLYHTFLA*RCCSPF Trigger: GAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTG...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | AGGGAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTTCCTGCAGGGCCGCTaGTTCTGTTCATCCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: REKGGKAALLPRLGNCLYFLQGR*FCSSSK Trigger: CTTGCTGGATGAACAGAACAAGCGGCCCTGCAGGAA...GTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS-3UTR CAA 90 bp | GAGAAGGGAGGGAAGGCAGCTCTGCTTCCTCGGTTAGGCAATTGTCTTTACTGTTCGTACCACACCTTCTaGGCCTTGAGGTGCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: EKGGKAALLPRLGNCLYCSYHTF*ALRCCS Trigger: ACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGA...ACAGTAAAGACAATTGCCTAACCGAGGAAGCAGAGCTGCCTTCCCTCCCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CCA 72 bp | CCTCAGGAAGCTCGGCGGTCTCTAGGGGCCATTCTCTaGCCCGCCTCTCCTCTTCCACCTGGACGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PQEARRSLGAIL*PASPLPPGRSA Trigger: AGCTGAGCGTCCAGGTGGAAGAGGAGAGGCGGGCCAGAGAATGGCCCCTAGAGACCGCCGAGCTTCCTGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CCA 72 bp | AGGGGCCATTCTCTGGCCCGCCTCTCCTCTTCCACCTaGACGCTCAGCTCCTGCAGATCTTGTTCTGACATG | + |
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Preference number: 6 (lower is better) Translates to: RGHSLARLSSST*TLSSCRSCSDM Trigger: CATGTCAGAACAAGATCTGCAGGAGCTGAGCGTCCAGGTGGAAGAGGAGAGGCGGGCCAGAGAATGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CCA 72 bp | GGCAGCTCCTGCATTGGCGGCCAGCCCACTGGATACTaGAAGACAGTGGTTCTGATGGGTTCAGCCCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: GSSCIGGQPTGY*KTVVLMGSALL Trigger: TAGCAGGGCTGAACCCATCAGAACCACTGTCTTCCAGTATCCAGTGGGCTGGCCGCCAATGCAGGAGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS TCA 72 bp | GCGGCCAGCCCACTGGATACTGGAAGACAGTGGTTCTaGTGGGTTCAGCCCTGCTACTTGGGGCTGAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: AASPLDTGRQWF*WVQPCYLGLSL Trigger: TAAGCTCAGCCCCAAGTAGCAGGGCTGAACCCATCAGAACCACTGTCTTCCAGTATCCAGTGGGCTGGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 72 bp | GCAGCTGCATCTCGGAACATGTCGTACCACACCTTCTaGGCCTTGAGGTGCTGCAGTCCATTCAGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AAASRNMSYHTF*ALRCCSPFRCF Trigger: GAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGCAGCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 72 bp | CACTGGCCTGTCAGCAGGAATTTCCTGCAGGGCCGCTaGTTCTGTTCATCCAGCAAGATGGCAGCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: HWPVSRNFLQGR*FCSSSKMAAAS Trigger: AGATGCAGCTGCCATCTTGCTGGATGAACAGAACAAGCGGCCCTGCAGGAAATTCCTGCTGACAGGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 90 bp | ATGGCAGCTGCATCTCGGAACATGTCGTACCACACCTTCTTGGCCTaGAGGTGCTGCAGTCCATTCAGGTGCTTCTTTCGGTTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: MAAASRNMSYHTFLA*RCCSPFRCFFRLWR Trigger: CCTCCACAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGCAGCTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS GCA 72 bp | GCTCCTGCAGATCTTGTTCTGACATGTGGGAAAACCTaGAGTTGGAGCCAAAGTCGCACTGGCCTGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: APADLVLTCGKT*SWSQSRTGLSA Trigger: TGCTGACAGGCCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCCACATGTCAGAACAAGATCTGCAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 72 bp | GCATCTCGGAACATGTCGTACCACACCTTCTTGGCCTaGAGGTGCTGCAGTCCATTCAGGTGCTTCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: ASRNMSYHTFLA*RCCSPFRCFFR Trigger: CCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 90 bp | AGCAAGATGGCAGCTGCATCTCGGAACATGTCGTACCACACCTTCTaGGCCTTGAGGTGCTGCAGTCCATTCAGGTGCTTCTTTCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKMAAASRNMSYHTF*ALRCCSPFRCFFRL Trigger: CAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTTCCGAGATGCAGCTGCCATCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 90 bp | CTCAGCTCCTGCAGATCTTGTTCTGACATGTGGGAAAACCTGCAGTaGGAGCCAAAGTCGCACTGGCCTGTCAGCAGGAATTTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSSCRSCSDMWENLQ*EPKSHWPVSRNFLQ Trigger: CTGCAGGAAATTCCTGCTGACAGGCCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCCACATGTCAGAACAAGATCTGCAGGAGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS GCA 72 bp | AACATGTCGTACCACACCTTCTTGGCCTTGAGGTGCTaGAGTCCATTCAGGTGCTTCTTTCGGTTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: NMSYHTFLALRC*SPFRCFFRLWR Trigger: CCTCCACAACCGAAAGAAGCACCTGAATGGACTGCAGCACCTCAAGGCCAAGAAGGTGTGGTACGACATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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| CDS CAA 72 bp | TGCAGATCTTGTTCTGACATGTGGGAAAACCTGCAGTaGGAGCCAAAGTCGCACTGGCCTGTCAGCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: CRSCSDMWENLQ*EPKSHWPVSRN Trigger: ATTCCTGCTGACAGGCCAGTGCGACTTTGGCTCCAACTGCAGGTTTTCCCACATGTCAGAACAAGATCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009220.5 |
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