Pregenerated sensors for ZMAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052676Ensembl transcript IDs: ENSMUST00000064659.6, ENSMUST00000113185.9
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAAAATACCACCAGTACTAACACAAATTCTTAAAAGGATTCTGTaGAGTCCGGTCTTCCACAGGCCTGACCATTCTTCCAAATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SKIPPVLTQILKRIL*SPVFHRPDHSSKFK Trigger: TTTGAATTTGGAAGAATGGTCAGGCCTGTGGAAGACCGGACTTCACAGAATCCTTTTAAGAATTTGTGTTAGTACTGGTGGTATTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCTTTCAATTACATTTTaGAAGGAGGGAGGTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: NTESSAISLAGFFSTHASLSITF*KEGGDR Trigger: TCTGTCACCTCCCTCCTTTCAAAATGTAATTGAAAG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTaGGTATTGTGTCCTTGCTTTTTGAAGGGTAGATTTAGACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IFCYLFSRFLLHSCF*VLCPCFLKGRFRLC Trigger: ACAAAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGAAAGGTTTTCTGTGCTaGTTCTGTACTTTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLKGFLC*FCTFLG Trigger: ACCAAGAAAAGTACAGAATCAGCACAGAAAACCTTT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCTCAAAACAGTTCCTTaGATGCTGGATTTAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLLKTVP*MLDLDV Trigger: AACATCTAAATCCAGCATTCAAGGAACTGTTTTGAG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCTCAAAACAGTTCCTTaGATGCTGGATTTAGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: NTESSAISLAGFFSTHASLKTVP*MLDLDV Trigger: AACATCTAAATCCAGCATTCAAGGAACTGTTTTGAG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTTCTTTAATGGACACTaGCTTTACCTTCTCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLFFNGH*LYLLFF Trigger: GAAGAAGAGAAGGTAAAGTCAGTGTCCATTAAAGAA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR CAA 90 bp | AGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTGTCCTTGCTTTTaGAAGGGTAGATTTAGACTTTGTGGTTCTACTTTCAATTACATT | + |
|
Preference number: 2 (lower is better) Translates to: RFLLHSCFLVLCPCF*KGRFRLCGSTFNYI Trigger: AATGTAATTGAAAGTAGAACCACAAAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR TCA 72 bp | CCACCAGTACTAACACAAATTCTTAAAAGGATTCTGTaGAGTCCGGTCTTCCACAGGCCTGACCATTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPVLTQILKRIL*SPVFHRPDHSS Trigger: GGAAGAATGGTCAGGCCTGTGGAAGACCGGACTTCACAGAATCCTTTTAAGAATTTGTGTTAGTACTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR GCA 72 bp | TTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATaGTTCTTGGTATTGTGTCCTTGCTTTTTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FCYLFSRFLLHS*FLVLCPCFLKG Trigger: ACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCCTCAAAACAGTTCCTaGAATGCTGGATTTAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: NTESSAISLAGFFSTHASPQNSS*NAGFRC Trigger: ACATCTAAATCCAGCATTCAAGGAACTGTTTTGAGG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR TCA 72 bp | TCCACTCATGCTTCTTGGTATTGTGTCCTTGCTTTTTaGAGGGTAGATTTAGACTTTGTGGTTCTACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: STHASWYCVLAF*RVDLDFVVLLS Trigger: TGAAAGTAGAACCACAAAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR GCA 72 bp | TTTCTTCTCCACTCATGCTTCTTGGTATTGTGTCCTTaGTTTTTGAAGGGTAGATTTAGACTTTGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLLHSCFLVLCP*FLKGRFRLCGS Trigger: AGAACCACAAAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGACGTGGGATCTTCTCTaGGGCAAGGGCAGGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLTWDLL*GKGRCL Trigger: TAGACACCTGCCCTTGCCTCAGAGAAGATCCCACGT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCCACTCGAGCACACCTaGGAATTTCCAGCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLPLEHT*EFPACM Trigger: CATGCATGCTGGAAATTCTCAGGTGTGCTCGAGTGG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064659.6 |
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| CDS-3UTR GCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCAGGAAGGGTGGAGGTaGAGGAGTAGTATTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLQEGWR*RSSIGF Trigger: GAACCCAATACTACTCCTGCACCTCCACCCTTCCTG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCACGTGGGATCTTCTCTaGGGCAAGGGCAGGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLATWDLL*GKGRCL Trigger: TAGACACCTGCCCTTGCCTCAGAGAAGATCCCACGT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTATCCTCCATTTCCCTaGAATGACCCTTGGGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASYPPFP*NDPWAL Trigger: TAGAGCCCAAGGGTCATTTCAGGGAAATGGAGGATA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGAGAAGCAGGCATTTCTaGGAACTCCTCTGTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLRSRHF*ELLCGK Trigger: CTTACCACAGAGGAGTTCTCAGAAATGCCTGCTTCT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTGGGTTATCTTCTTGTTaGCTGAGGCTCAGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASGLSSC*LRLREA Trigger: TGCTTCTCTGAGCCTCAGTCAACAAGAAGATAACCC...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR GCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGGTATGGTCCTGGGTGTaGCCAGAAATTTTCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLVWSWV*PEIFKW Trigger: CCACTTGAAAATTTCTGGGCACACCCAGGACCATAC...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGAGACTTCAGGAAGGGTaGAGGTGCAGGAGTAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLRLQEG*RCRSSI Trigger: AATACTACTCCTGCACCTCCACCCTTCCTGAAGTCT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGGTGGATGGAGATACTTaGTCATGTTCTTCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLVDGDT*SCSSSD Trigger: GTCACTGGAAGAACATGATCAAGTATCTCCATCCAC...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTTCATCCATCTTTGGTaGGCATGTGGATGGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLFIHLW*ACGWRY Trigger: GTATCTCCATCCACATGCTCACCAAAGATGGATGAA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCTGTGGAGCCTCAAATaGAAATCTTTCCTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASLWSLK*KSFLTR Trigger: CCTTGTGAGGAAAGATTTTCATTTGAGGCTCCACAG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCTGTGGAGCCTCAAATaGAAATCTTTCCTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLLWSLK*KSFLTR Trigger: CCTTGTGAGGAAAGATTTTCATTTGAGGCTCCACAG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR GCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCCAGGAAGGGTGGAGGTaGAGGAGTAGTATTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAQEGWR*RSSIGF Trigger: GAACCCAATACTACTCCTGCACCTCCACCCTTCCTG...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTTGTTTCATGGGCACTaGCATTGTCATTTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLLFHGH*HCHLRA Trigger: TGCCCTCAAATGACAATGCCAGTGCCCATGAAACAA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTTGTTTCATGGGCACTaGCATTGTCATTTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASLFHGH*HCHLRA Trigger: TGCCCTCAAATGACAATGCCAGTGCCCATGAAACAA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTCCTCAAACATTGTATaGCTGGATCTTCTGTCAACC | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLSSNIV*LDLLST Trigger: GGTTGACAGAAGATCCAGTCATACAATGTTTGAGGA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTCCTCAAACATTGTATaGCTGGATCTTCTGTCAACC | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASSSNIV*LDLLST Trigger: GGTTGACAGAAGATCCAGTCATACAATGTTTGAGGA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTCAGAACCCAAGAATTaGCTCATCCCAAAGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASSEPKN*LIPKDF Trigger: GAAATCCTTTGGGATGAGTCAATTCTTGGGTTCTGA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTCAGTTCCTTGCATGTaGGACCGGAACATATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLSVPCM*DRNICK Trigger: TTTACATATGTTCCGGTCCCACATGCAAGGAACTGA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGATCATTGTATGGTCCTaGGTGTGCCCAGAAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLIIVWS*VCPEIF Trigger: GAAAATTTCTGGGCACACCCAGGACCATACAATGAT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTTGTGCACTGCTGTATaGATCTGTGTAAGTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASLCTAV*ICVSLE Trigger: TTCCAGACTTACACAGATCCATACAGCAGTGCACAA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTATCCTCCATTTCCCTaGAATGACCCTTGGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAYPPFP*NDPWAL Trigger: TAGAGCCCAAGGGTCATTTCAGGGAAATGGAGGATA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCAGAAGCAGGCATTTCTaGGAACTCCTCTGTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLARSRHF*ELLCGK Trigger: CTTACCACAGAGGAGTTCTCAGAAATGCCTGCTTCT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR GCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCGTATGGTCCTGGGTGTaGCCAGAAATTTTCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAVWSWV*PEIFKW Trigger: CCACTTGAAAATTTCTGGGCACACCCAGGACCATAC...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTCTTTGGTGAGCATGTaGATGGAGATACTTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLSLVSM*MEILDH Trigger: ATGATCAAGTATCTCCATCCACATGCTCACCAAAGA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTCTTTGGTGAGCATGTaGATGGAGATACTTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASSLVSM*MEILDH Trigger: ATGATCAAGTATCTCCATCCACATGCTCACCAAAGA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCAGACTTCAGGAAGGGTaGAGGTGCAGGAGTAGTATT | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLARLQEG*RCRSSI Trigger: AATACTACTCCTGCACCTCCACCCTTCCTGAAGTCT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| 3UTR CAA 72 bp | CTCCACTCATGCTTCTTGGTATTGTGTCCTTGCTTTTaGAAGGGTAGATTTAGACTTTGTGGTTCTACTTTC | + |
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Preference number: 4 (lower is better) Translates to: LHSCFLVLCPCF*KGRFRLCGSTF Trigger: GAAAGTAGAACCACAAAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCGTGGATGGAGATACTTaGTCATGTTCTTCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAVDGDT*SCSSSD Trigger: GTCACTGGAAGAACATGATCAAGTATCTCCATCCAC...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTTCATCCATCTTTGGTaGGCATGTGGATGGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAFIHLW*ACGWRY Trigger: GTATCTCCATCCACATGCTCACCAAAGATGGATGAA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS-3UTR CCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCTAGAATCATTGTATaGTCCTGGGTGTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASRIIV*SWVCPE Trigger: TTCTGGGCACACCCAGGACCATACAATGATTCTAGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTCTAAAAGAAGTCTTTaGCTCGGATTCTCTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASSKRSL*LGFSRF Trigger: GAATCTAGAGAATCCGAGCCAAAGACTTCTTTTAGA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| 3UTR CAA 72 bp | TTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATaGTGTCCTTGCTTTTTGAAGGGTAGATTTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: FSRFLLHSCFLV*CPCFLKGRFRL Trigger: AAGTCTAAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| 3UTR CAA 72 bp | TATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTaGGTATTGTGTCCTTGCTTTTTGAAGGGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSRFLLHSCF*VLCPCFLKGRF Trigger: AAATCTACCCTTCAAAAAGCAAGGACACAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCCAGAAATTTTCAAGTaGAAGTGTTTGTTCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASPEIFK*KCLFKH Trigger: ATGCTTGAACAAACACTTCCACTTGAAAATTTCTGG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCAAACATTGTATGACTaGATCTTCTGTCAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLQTLYD*IFCQPF Trigger: AAATGGTTGACAGAAGATCCAGTCATACAATGTTTG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTTTTTCTTTTATGTTTaGACTGTTCCTTCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTESSAISLAGFFSTHASFFFYV*TVPSLV Trigger: GACCAGAGAAGGAACAGTCCAAACATAAAAGAAAAA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTTTTTCTTTTATGTTTaGACTGTTCCTTCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLFFFYV*TVPSLV Trigger: GACCAGAGAAGGAACAGTCCAAACATAAAAGAAAAA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCCTCTCTCTTACTTTaGTTGATGAGCTTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASSLLL*LMSLSL Trigger: CAAAGACAAGCTCATCAAGCAAAGTAAGAGAGAGGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCTCATTCTATATGCTaGAGGAGGCTTCACAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASHSIC*RRLHNN Trigger: GTTATTGTGAAGCCTCCTCCAGCATATAGAATGAGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCATACCTATAGCTTTCTaGCATCCGTCTAAAACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAIPIAF*HPSKTS Trigger: ACTAGTTTTAGACGGATGTCAGAAAGCTATAGGTAT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCTAAAAGAAGTCTTTaGCTCGGATTCTCTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASKRSL*LGFSRF Trigger: GAATCTAGAGAATCCGAGCCAAAGACTTCTTTTAGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCCAAACATTGTATGACTaGATCTTCTGTCAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAQTLYD*IFCQPF Trigger: AAATGGTTGACAGAAGATCCAGTCATACAATGTTTG...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CCA 90 bp | GGTGATACTGCAGATATGGCATACGTAGGTTCTCATTCTATATGCTaGAGGAGGCTTCACAATAACAGACTTCAGGAAGGGTGGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GDTADMAYVGSHSIC*RRLHNNRLQEGWRC Trigger: GCACCTCCACCCTTCCTGAAGTCTGTTATTGTGAAGCCTCCTCCAGCATATAGAATGAGAACCTACGTATGCCATATCTGCAGTATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS TCA 90 bp | AGATCAGTAAAGTTGTTTCTGTTGACTTCTCCACTCGAGCACACCTaGGAATTTCCAGCATGCATGTTCACTTTCCTACCAGGCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSVKLFLLTSPLEHT*EFPACMFTFLPGTS Trigger: CGAAGTGCCTGGTAGGAAAGTGAACATGCATGCTGGAAATTCTCAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTACTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064659.6 |
||
| CDS GCA 90 bp | AAAGGTGATACTGCAGATATGGCATACGTAGGTTCTCATTCTATATaGTGGAGGAGGCTTCACAATAACAGACTTCAGGAAGGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGDTADMAYVGSHSI*WRRLHNNRLQEGWR Trigger: CCTCCACCCTTCCTGAAGTCTGTTATTGTGAAGCCTCCTCCAGCATATAGAATGAGAACCTACGTATGCCATATCTGCAGTATCACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTCATGGGCACTGGCATaGTCATTTGAGGGCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASSWALA*SFEGRC Trigger: GCATCTGCCCTCAAATGACAATGCCAGTGCCCATGA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTGTCGCCTTCTATGACTaGTTTCATGGGCACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASVAFYD*FHGHWH Trigger: ATGCCAGTGCCCATGAAACAAGTCATAGAAGGCGAC...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CCA 90 bp | GTTTTCTCTTCTGACGTCGCCTTCTATGACTTGTTTCATGGGCACTaGCATTGTCATTTGAGGGCAGATGCTTGTAAATGTCATAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSSDVAFYDLFHGH*HCHLRADACKCHSL Trigger: TAGACTATGACATTTACAAGCATCTGCCCTCAAATGACAATGCCAGTGCCCATGAAACAAGTCATAGAAGGCGACGTCAGAAGAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTTGATGTTCAGTTCCTaGCATGTGGGACCGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLLMFSS*HVGPEH Trigger: ATGTTCCGGTCCCACATGCAAGGAACTGAACATCAA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTGCTAGGGTTATCTTCTaGTTGACTGAGGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASARVIF*LTEAQR Trigger: TCTCTGAGCCTCAGTCAACAAGAAGATAACCCTAGC...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGGCTAGGGTTATCTTCTaGTTGACTGAGGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLARVIF*LTEAQR Trigger: TCTCTGAGCCTCAGTCAACAAGAAGATAACCCTAGC...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTACCAGGCACTTCGCTTaGTTCTCCATGCATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASTRHFA*FSMHLK Trigger: TTTCAAATGCATGGAGAACAAAGCGAAGTGCCTGGT...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064659.6 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTGTAAAGTTGTTTCTGTaGACTTCTCCACTCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASVKLFL*TSPLEH Trigger: GTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTAC...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGGTAAAGTTGTTTCTGTaGACTTCTCCACTCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLVKLFL*TSPLEH Trigger: GTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTAC...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTCACTGGCATTGTCATTaGAGGGCAGATGCTTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASHWHCH*RADACK Trigger: TTTACAAGCATCTGCCCTCAAATGACAATGCCAGTG...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGATCTCCACACTCAGCTaGACAAGACTCTTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLISTLS*TRLLHF Trigger: AAAATGCAAGAGTCTTGTCAAGCTGAGTGTGGAGAT...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTCTGTATTCATGGGCTaGGGCTTCCATGTAATTATC | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLSVFMG*GFHVII Trigger: GATAATTACATGGAAGCCCAAGCCCATGAATACAGA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCGTCGCCTTCTATGACTaGTTTCATGGGCACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAVAFYD*FHGHWH Trigger: ATGCCAGTGCCCATGAAACAAGTCATAGAAGGCGAC...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGTGCAGATCAGTAAAGTaGTTTCTGTTGACTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLCRSVK*FLLTSP Trigger: TGGAGAAGTCAACAGAAACAACTTTACTGATCTGCA...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCAGGGTTATCTTCTTGTaGACTGAGGCTCAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLARVIFL*TEAQRS Trigger: GCTTCTCTGAGCCTCAGTCAACAAGAAGATAACCCT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGAATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTTCCTCTCTCTTACTTaGCTTGATGAGCTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTESSAISLAGFFSTHASFLSLT*LDELVF Trigger: AAAGACAAGCTCATCAAGCAAAGTAAGAGAGAGGAA...AGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGATTCAGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGCTATCTCTTTAGCAGGTTTCTTCTCCACTCATGCTTCTTGGTATTGCTAGATTTCTTCATTTaGATGTCATCTCCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: IFCYLFSRFLLHSCFLVLLDFFI*MSSPHS Trigger: TGAGTGTGGAGATGACATCAAAATGAAGAAATCTAG...CAATACCAAGAAGCATGAGTGGAGAAGAAACCTGCTAAAGAGATAGCAGAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS GCA 90 bp | TCTCCACTCGAGCACACCTCAAAATGTGAAATCCTTTCTGATTCATaGTGTAGAACCACTCCACATGGTTTACAAAAATTATCTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLEHTSKCEILSDS*CRTTPHGLQKLSVK Trigger: TTTTACAGATAATTTTTGTAAACCATGTGGAGTGGTTCTACAGCATGAATCAGAAAGGATTTCACATTTTGAGGTGTGCTCGAGTGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCATCTCCACACTCAGCTaGACAAGACTCTTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAISTLS*TRLLHF Trigger: AAAATGCAAGAGTCTTGTCAAGCTGAGTGTGGAGAT...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCTGTATTCATGGGCTaGGGCTTCCATGTAATTATC | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASVFMG*GFHVII Trigger: GATAATTACATGGAAGCCCAAGCCCATGAATACAGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCCATCATTTCTCCTCTTaGAATGAGATGGTAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAHHFSS*NEMVTS Trigger: ACTGGTTACCATCTCATTCAAAGAGGAGAAATGATG...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTCTCTCTTACTTTGCTaGATGAGCTTGTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLASLLLC*MSLSLS Trigger: AGACAAAGACAAGCTCATCAAGCAAAGTAAGAGAGA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCCTCTTATTCCTGTGTGTATCTAAATCAGTATCATTTTCTTTTAGCCTTCCTCTCTCTTACTTaGCTTGATGAGCTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFSSYSCVYLNQYHFLLAFLSLT*LDELVF Trigger: AAAGACAAGCTCATCAAGCAAAGTAAGAGAGAGGAA...GGCTAAAAGAAAATGATACTGATTTAGATACACACAGGAATAAGAGGAGAAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CAA 72 bp | ACAGACTTCAGGAAGGGTGGAGGTGCAGGAGTAGTATaGGGTTCATCCATCTTTGGTGAGCATGTGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: TDFRKGGGAGVV*GSSIFGEHVDG Trigger: TCCATCCACATGCTCACCAAAGATGGATGAACCCAATACTACTCCTGCACCTCCACCCTTCCTGAAGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CCA 72 bp | TGGAGGAGGCTTCACAATAACAGACTTCAGGAAGGGTaGAGGTGCAGGAGTAGTATTGGGTTCATCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: WRRLHNNRLQEG*RCRSSIGFIHL Trigger: AAGATGGATGAACCCAATACTACTCCTGCACCTCCACCCTTCCTGAAGTCTGTTATTGTGAAGCCTCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS TCA 72 bp | TTCTTGTTGACTGAGGCTCAGAGAAGCAGGCATTTCTaGGAACTCCTCTGTGGTAAGCTGATAGTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLTEAQRSRHF*ELLCGKLIVAF Trigger: GAAAGCCACTATCAGCTTACCACAGAGGAGTTCTCAGAAATGCCTGCTTCTCTGAGCCTCAGTCAACAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CCA 72 bp | GCAGATATGGCATACGTAGGTTCTCATTCTATATGCTaGAGGAGGCTTCACAATAACAGACTTCAGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADMAYVGSHSIC*RRLHNNRLQEG Trigger: CCCTTCCTGAAGTCTGTTATTGTGAAGCCTCCTCCAGCATATAGAATGAGAACCTACGTATGCCATATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
||
| CDS CCA 72 bp | TCTGACGTCGCCTTCTATGACTTGTTTCATGGGCACTaGCATTGTCATTTGAGGGCAGATGCTTGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SDVAFYDLFHGH*HCHLRADACKC Trigger: ACATTTACAAGCATCTGCCCTCAAATGACAATGCCAGTGCCCATGAAACAAGTCATAGAAGGCGACGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 90 bp | TCCACATGGTTTACAAAAATTATCTGTAAAATACGCAGGTTGTTCTaGTCCATCACACGTGGGATCTTCTCTGAGGCAAGGGCAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: STWFTKIICKIRRLF*SITRGIFSEARAGV Trigger: GACACCTGCCCTTGCCTCAGAGAAGATCCCACGTGTGATGGACAAGAACAACCTGCGTATTTTACAGATAATTTTTGTAAACCATGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 90 bp | GCAGCAGCTAGGGAGTCAAAACTCATGTTGTGCAGATCAGTAAAGTaGTTTCTGTTGACTTCTCCACTCGAGCACACCTCAAAATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: AAARESKLMLCRSVK*FLLTSPLEHTSKCE Trigger: TTCACATTTTGAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTACTGATCTGCACAACATGAGTTTTGACTCCCTAGCTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
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| CDS TCA 72 bp | AAGTTGTTTCTGTTGACTTCTCCACTCGAGCACACCTaGGAATTTCCAGCATGCATGTTCACTTTCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: KLFLLTSPLEHT*EFPACMFTFLP Trigger: TGGTAGGAAAGTGAACATGCATGCTGGAAATTCTCAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064659.6 |
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| CDS GCA 72 bp | GATGGAGCAGCAGCTAGGGAGTCAAAACTCATGTTGTaGAGATCAGTAAAGTTGTTTCTGTTGACTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: DGAAARESKLML*RSVKLFLLTSP Trigger: TGGAGAAGTCAACAGAAACAACTTTACTGATCTGCACAACATGAGTTTTGACTCCCTAGCTGCTGCTCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 72 bp | AGGGAGTCAAAACTCATGTTGTGCAGATCAGTAAAGTaGTTTCTGTTGACTTCTCCACTCGAGCACACCTCA | + |
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Preference number: 6 (lower is better) Translates to: RESKLMLCRSVK*FLLTSPLEHTS Trigger: TGAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTACTGATCTGCACAACATGAGTTTTGACTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
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| CDS TCA 72 bp | GGGCAGATGCTTGTAAATGTCATAGTCTACATTGTATaGGCTAGGGTTATCTTCTTGTTGACTGAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GQMLVNVIVYIV*ARVIFLLTEAQ Trigger: CTGAGCCTCAGTCAACAAGAAGATAACCCTAGCTCATACAATGTAGACTATGACATTTACAAGCATCTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS GCA 72 bp | ACTGCAGATATGGCATACGTAGGTTCTCATTCTATATaGTGGAGGAGGCTTCACAATAACAGACTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TADMAYVGSHSI*WRRLHNNRLQE Trigger: TTCCTGAAGTCTGTTATTGTGAAGCCTCCTCCAGCATATAGAATGAGAACCTACGTATGCCATATCTGCAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CCA 72 bp | TCTCACATGGGAGTCCTTCCTCAAACATTGTATGACTaGATCTTCTGTCAACCATTTCTTCGTAATTATGGG | + |
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Preference number: 6 (lower is better) Translates to: SHMGVLPQTLYD*IFCQPFLRNYG Trigger: CCCATAATTACGAAGAAATGGTTGACAGAAGATCCAGTCATACAATGTTTGAGGAAGGACTCCCATGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 72 bp | TCCTGGGTGTGCCCAGAAATTTTCAAGTGGAAGTGTTaGTTCAAGCATTTTATGTCTGGGTCTAGAATCAAC | + |
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Preference number: 6 (lower is better) Translates to: SWVCPEIFKWKC*FKHFMSGSRIN Trigger: GTTGATTCTAGACCCAGACATAAAATGCTTGAACAAACACTTCCACTTGAAAATTTCTGGGCACACCCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 90 bp | TGTTGTAATCATCAAATTCATTTTGGAAATCATCATTTCTCCTCTTaGAATGAGATGGTAACCAGTGAGGAGATTGGCCCTCCACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CCNHQIHFGNHHFSS*NEMVTSEEIGPPLG Trigger: CCCCAGTGGAGGGCCAATCTCCTCACTGGTTACCATCTCATTCAAAGAGGAGAAATGATGATTTCCAAAATGAATTTGATGATTACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 90 bp | AGGGAGTCAAAACTCATGTTGTGCAGATCAGTAAAGTTGTTTCTGTaGACTTCTCCACTCGAGCACACCTCAAAATGTGAAATCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RESKLMLCRSVKLFL*TSPLEHTSKCEILS Trigger: AGAAAGGATTTCACATTTTGAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTACTGATCTGCACAACATGAGTTTTGACTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
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| CDS TCA 72 bp | TTCTCTGTATCTCTGATCCCTATACCTATAGCTTTCTaGCATCCGTCTAAAACTAGTATTGGGATCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FSVSLIPIPIAF*HPSKTSIGIKS Trigger: GGACTTGATCCCAATACTAGTTTTAGACGGATGTCAGAAAGCTATAGGTATAGGGATCAGAGATACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS TCA 72 bp | TCTATGACTTGTTTCATGGGCACTGGCATTGTCATTTaGGGGCAGATGCTTGTAAATGTCATAGTCTACATT | + |
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Preference number: 6 (lower is better) Translates to: SMTCFMGTGIVI*GQMLVNVIVYI Trigger: AATGTAGACTATGACATTTACAAGCATCTGCCCTCAAATGACAATGCCAGTGCCCATGAAACAAGTCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 72 bp | TTTACAAAAATTATCTGTAAAATACGCAGGTTGTTCTaGTCCATCACACGTGGGATCTTCTCTGAGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FTKIICKIRRLF*SITRGIFSEAR Trigger: CCTTGCCTCAGAGAAGATCCCACGTGTGATGGACAAGAACAACCTGCGTATTTTACAGATAATTTTTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 72 bp | TTCTATGACTTGTTTCATGGGCACTGGCATTGTCATTaGAGGGCAGATGCTTGTAAATGTCATAGTCTACAT | + |
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Preference number: 6 (lower is better) Translates to: FYDLFHGHWHCH*RADACKCHSLH Trigger: ATGTAGACTATGACATTTACAAGCATCTGCCCTCAAATGACAATGCCAGTGCCCATGAAACAAGTCATAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS CAA 72 bp | AAACTCATGTTGTGCAGATCAGTAAAGTTGTTTCTGTaGACTTCTCCACTCGAGCACACCTCAAAATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLMLCRSVKLFL*TSPLEHTSKCE Trigger: TTCACATTTTGAGGTGTGCTCGAGTGGAGAAGTCAACAGAAACAACTTTACTGATCTGCACAACATGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
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| CDS CAA 72 bp | ACATGGTTTACAAAAATTATCTGTAAAATACGCAGGTaGTTCTTGTCCATCACACGTGGGATCTTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TWFTKIICKIRR*FLSITRGIFSE Trigger: CTCAGAGAAGATCCCACGTGTGATGGACAAGAACAACCTGCGTATTTTACAGATAATTTTTGTAAACCATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064659.6 ENSMUST00000113185.9 |
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| CDS GCA 72 bp | GAGCACACCTCAAAATGTGAAATCCTTTCTGATTCATaGTGTAGAACCACTCCACATGGTTTACAAAAATTA | + |
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Preference number: 6 (lower is better) Translates to: EHTSKCEILSDS*CRTTPHGLQKL Trigger: TAATTTTTGTAAACCATGTGGAGTGGTTCTACAGCATGAATCAGAAAGGATTTCACATTTTGAGGTGTGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113185.9 |
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