Pregenerated sensors for ZKSCAN7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063488Ensembl transcript IDs: ENSMUST00000063980.8, ENSMUST00000215872.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCATGCATACGGCTGCGTTAGCCACATGGTCAGTCCAGCCACATTaGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACT | + |
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Preference number: 1 (lower is better) Translates to: SMHTAALATWSVQPH*PWWTAGSPGPAFPT Trigger: AGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGACCATGTGGCTAACGCAGCCGTATGCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR CCA 90 bp | AACAAATGTGAGGGCTTAGAGAGATGGCTCAGTAGTTCAGAGCACTaGCTGCTCTGCCAGAGGACTCAGGATGTCACCATCACAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NKCEGLERWLSSSEH*LLCQRTQDVTITGW Trigger: CCACCCTGTGATGGTGACATCCTGAGTCCTCTGGCAGAGCAGCCAGTGCTCTGAACTACTGAGCCATCTCTCTAAGCCCTCACATTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR CCA 90 bp | TCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTGTGCACTAGACTaGCCTCAAACTCAGAGATATACCTGCCTCTGCCTCTCAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: SVYPWLSQNSLCALD*PQTQRYTCLCLSNA Trigger: AGCATTTGAGAGGCAGAGGCAGGTATATCTCTGAGTTTGAGGCCAGTCTAGTGCACAGAGTGAGTTCTGGGACAGCCAAGGGTACACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR GCA 90 bp | TGCTATGTAGTCCAAGTTGACCTTGGACTCACAAAGATCTGTCTCTaGTTCCCAAATGCTAGGTTTACAGGTATGTGCCACCCCACCCAG | + |
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Preference number: 1 (lower is better) Translates to: CYVVQVDLGLTKICL*FPNARFTGMCHPTQ Trigger: CTGGGTGGGGTGGCACATACCTGTAAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTGGACTACATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR GCA 90 bp | CCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTGGAACTTaGTATGTAGTCCAAGTTGACCTTGGACTCACAAAGATCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: PPPLKTVIKHGWRGT*YVVQVDLGLTKICL Trigger: GAGACAGATCTTTGTGAGTCCAAGGTCAACTTGGACTACATAGCAAGTTCCACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR GCA 90 bp | ACAGTTCCACATGTCTCCAAAAAGATGTTAGGCCATGTGTGGTGGTaGTTTGAATCTCAGCTCTTGAGAGGAGAACCAGGTAGATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TVPHVSKKMLGHVWW*FESQLLRGEPGRSL Trigger: CAGAGATCTACCTGGTTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAACATCTTTTTGGAGACATGTGGAACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR CCA 90 bp | ATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTaGCGTGGAACTTGCTATGTAGTCCAAGTTGACCTTGGACTCACA | + |
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Preference number: 1 (lower is better) Translates to: IPTFPPPLKTVIKHG*RGTCYVVQVDLGLT Trigger: TGTGAGTCCAAGGTCAACTTGGACTACATAGCAAGTTCCACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR CCA 90 bp | CATTGTACAGTTCCACATGTCTCCAAAAAGATGTTAGGCCATGTGTaGTGGTGCTTTGAATCTCAGCTCTTGAGAGGAGAACCAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: HCTVPHVSKKMLGHV*WCFESQLLRGEPGR Trigger: TCTACCTGGTTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAACATCTTTTTGGAGACATGTGGAACTGTACAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR GCA 90 bp | TGGCTCAGTAAGCAGAGTACTTGCCATCTGGCACAAGGACCTGAATaGATATCTCCAGAATACACACAGAAATTCATGGGAGTATATGTC | + |
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Preference number: 1 (lower is better) Translates to: WLSKQSTCHLAQGPE*ISPEYTQKFMGVYV Trigger: GACATATACTCCCATGAATTTCTGTGTGTATTCTGGAGATATGCATTCAGGTCCTTGTGCCAGATGGCAAGTACTCTGCTTACTGAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR GCA 90 bp | CCCTCTGAGGATGTGTCAAGCGAATGTGATCCTTTAGAAATGTCCTaGTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTT | + |
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Preference number: 1 (lower is better) Translates to: PSEDVSSECDPLEMS*FGLNSELPILFLPV Trigger: AACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGACATTTCTAAAGGATCACATTCGCTTGACACATCCTCAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR CCA 90 bp | TTCAGATTATTTCATGAAAATGTGTGTATGCTGGGCCTAGAGAGATaGCTCAGTAAGCAGAGTACTTGCCATCTGGCACAAGGACCTGAA | + |
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Preference number: 1 (lower is better) Translates to: FRLFHENVCMLGLER*LSKQSTCHLAQGPE Trigger: TTCAGGTCCTTGTGCCAGATGGCAAGTACTCTGCTTACTGAGCCATCTCTCTAGGCCCAGCATACACACATTTTCATGAAATAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR CAA 90 bp | GTCCATGCATACGGCTGCGTTAGCCACATGGTCAGTCCAGCCACATaGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VHAYGCVSHMVSPAT*ALVDCWISRTSISH Trigger: GTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGACCATGTGGCTAACGCAGCCGTATGCATGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAAAGCTGCAGCAGCCACTCATGGTTATCAACAGATACCAAATGCTGGCTCAGTCCAGCCACATTaGCCCTGGTGGACTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LGKAAAATHGYQQIPNAGSVQPH*PWWTAG Trigger: TCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGA...GCCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCTGCAGCTTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGATGCTCAACAGGACTGGAGGGCATTTCTGGATGCACCCCTACATCTTTACGCTGCCTTCTTCATCTaGGGGATGCTCTTCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PDAQQDWRAFLDAPLHLYAAFFI*GMLFPL Trigger: CAGAGGGAAGAGCATCCCTCAGATGAAGAAGGCAGC...GTAAAGATGTAGGGGTGCATCCAGAAATGCCCTCCAGTCCTGTTGAGCATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACTACCCAATCAAACTGGGTGACGGGTaGAGGGGTGTTCATTATACA | + |
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Preference number: 2 (lower is better) Translates to: LALVDCWISRTSISHYPIKLGDG*RGVHYT Trigger: TGTATAATGAACACCCCTGCACCCGTCACCCAGTTT...GATTGGGTAGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTGAGCACTGGCTGCTCTaGCAGAGGACTCAGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: VIPTFPPPLKTVIKHGWREHWLL*QRTQDV Trigger: GACATCCTGAGTCCTCTGGCAGAGCAGCCAGTGCTC...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTGCCACCCCACCCAGATaGAGGCTGCTTTTCTACATC | + |
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Preference number: 2 (lower is better) Translates to: VIPTFPPPLKTVIKHGWRATPPR*RLLFYI Trigger: GATGTAGAAAAGCAGCCTTCATCTGGGTGGGGTGGC...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | AACTATACAATACTTAGGTTAGTAACCTTCATGTCCACCCTCTGCCAAGCTGGCAGAGAGGCCAGGCCGTaGTCATCTCTTACCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: NYTILRLVTFMSTLCQAGREARP*SSLTTS Trigger: GGAGGTGGTAAGAGATGAGCACGGCCTGGCCTCTCT...GCCAGCTTGGCAGAGGGTGGACATGAAGGTTACTAACCTAAGTATTGTATAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR CAA 90 bp | ATCTATGTGACGTGGCAATGGAGCATGTATACTGGTTCAGAACAGTaGAAGGGAACAGCAGTTAGGACACTGGACTGGGCAAAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: IYVTWQWSMYTGSEQ*KGTAVRTLDWAKAG Trigger: ACCTGCCTTTGCCCAGTCCAGTGTCCTAACTGCTGTTCCCTTCAACTGTTCTGAACCAGTATACATGCTCCATTGCCACGTCACATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGCTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAATCCCACTACCCAATCTaGCTGTTCTGGGTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: VLLWTELRTSYPVLTCCQSHYPI*LFWVPI Trigger: AATGGGGACCCAGAACAGTCAGATTGGGTAGTGGGA...TTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGAAAGCTGCAGCAGCCACTCATGGTTATCAACAGATACCAAATGCTGGCCCCCCAAACAGGGCATaGTTGCAAGTAAGATCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LGKAAAATHGYQQIPNAGPPNRA*LQVRSK Trigger: TTTAGATCTTACTTGCAATCATGCCCTGTTTGGGGG...GCCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCTGCAGCTTTCCCCAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGAATACACACAGAAATTCATGGGAGTATATGTCCATAACCCTGGTGCAGCCTCTGCCTCTCAAATaGTGGGATCACTGCCCGACT | + |
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Preference number: 2 (lower is better) Translates to: LQNTHRNSWEYMSITLVQPLPLK*WDHCPT Trigger: AGTCGGGCAGTGATCCCAGCATTTGAGAGGCAGAGG...CTGCACCAGGGTTATGGACATATACTCCCATGAATTTCTGTGTGTATTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGAAAGCTGCAGCAGCCACTCATGGTTATCAACAGATACCAAATGCTGGAGGGACTCCTTCTTATaGCTGAGAAAACCCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: PGESCSSHSWLSTDTKCWRDSFL*LRKPIA Trigger: AGCTATGGGTTTTCTCAGCCATAAGAAGGAGTCCCT...CCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCTGCAGCTTTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGAAAGCTGCAGCAGCCACTCATGGTTATCAACAGATACCAAATGCTGGCATCAGCATCTTTTGTaGCCTGGGCCAATGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: PGESCSSHSWLSTDTKCWHQHLL*PGPMIS Trigger: AGAAATCATTGGCCCAGGCCACAAAAGATGCTGATG...CCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCTGCAGCTTTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGAGGCAGGTGGATTTCTaGTTTCGAGGCCAGCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGRQVDF*FRGQPS Trigger: ACTAGGCTGGCCTCGAAATCAGAAATCCACCTGCCT...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACGGTGAAGGCACTTGTTaGCAAGCCTGGCAACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SRENISSQKAVVCHSVSHGEGTC*QAWQPN Trigger: GTTGGGTTGCCAGGCTTGGCAACAAGTGCCTTCACC...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTAGAACCAGTGCACTCACAGGTACAGACATATACAAATACACTCCATTTTGTTGCCGGGCGTGGTaGCGCACGTCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSRTSALTGTDIYKYTPFCCRAW*RTSLIP Trigger: TGGGATTAAAGACGTGCGCCACCACGCCCGGCAACA...AAATGGAGTGTATTTGTATATGTCTGTACCTGTGAGTGCACTGGTTCTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR TCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTTCTGGCACAAGGACCTaGATGCATATCTCCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: VIPTFPPPLKTVIKHGWRSGTRT*MHISRI Trigger: TATTCTGGAGATATGCATTCAGGTCCTTGTGCCAGA...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGGGCTGGCGTGGAACTTaGTATGTAGTCCAAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGGWRGT*YVVQVD Trigger: GTCAACTTGGACTACATAGCAAGTTCCACGCCAGCC...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAATCCACATTGGCCCTGGTaGACTGCTGGATCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FGLNSELPILFLPVAKRNPHWPW*TAGSPG Trigger: TCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGG...ATTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCATCACATTGATAGGACTTCTGCCTCTTTGCTTCTCCCTGATGCTCAACAGTTCAAATGCAAAACCTaGGGAAAGCTGCAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: THHIDRTSASLLLPDAQQFKCKT*GKLQQP Trigger: TGGCTGCTGCAGCTTTCCCCAGGTTTTGCATTTGAA...CTGTTGAGCATCAGGGAGAAGCAAAGAGGCAGAAGTCCTATCAATGTGATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTGACCTTGGACTCACAAAGATCTGTCTCTGCTTCCCAAATGCTAGGTTTAGATATACCTGCCTCTaGCTCTCAAATGCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: QVDLGLTKICLCFPNARFRYTCL*LSNAGI Trigger: GATCCCAGCATTTGAGAGGCAGAGGCAGGTATATCT...AAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTGCACAAGGACCTGAATaGATATCTCCAGAATACACA | + |
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Preference number: 2 (lower is better) Translates to: VIPTFPPPLKTVIKHGWRAQGPE*ISPEYT Trigger: TGTGTATTCTGGAGATATGCATTCAGGTCCTTGTGC...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGCTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAGGAGAGTCTAATCACTaGCTTGGTCAGAGTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VLLWTELRTSYPVLTCCQGESNH*LGQSSF Trigger: GAAAGAACTCTGACCAAGGCAGTGATTAGACTCTCC...TTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACCTGGGCCTAGAGAGATaGCTCAGTAAGCAGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SRENISSQKAVVCHSVSHLGLER*LSKQST Trigger: AGTACTCTGCTTACTGAGCCATCTCTCTAGGCCCAG...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAAAAACCTGGGGAAAGCTaGAGCAGCCACTCATGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LWTELRTSYPVLTCCQKKKPGES*SSHSWL Trigger: TAACCATGAGTGGCTGCTGCAGCTTTCCCCAGGTTT...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTGACCTTGGACTCACAAAGATCTGTCTCTGCTTCCCAAATGCTAGGTTTCTCTGTGCACTAGACTaGCCTCAAACTCAGAGATAT | + |
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Preference number: 2 (lower is better) Translates to: QVDLGLTKICLCFPNARFLCALD*PQTQRY Trigger: ATATCTCTGAGTTTGAGGCCAGTCTAGTGCACAGAG...AAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGAGTACTTGCCATCTaGCACAAGGACCTGAATGCA | + |
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Preference number: 2 (lower is better) Translates to: SRENISSQKAVVCHSVSHRVLAI*HKDLNA Trigger: TGCATTCAGGTCCTTGTGCCAGATGGCAAGTACTCT...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGTCTCAATCTGTTCACTaGAGAGCCAGAATGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGSQSVH*RARMCL Trigger: TAAACACATTCTGGCTCTTCAGTGAACAGATTGAGA...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGCTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAATCAAAAGAGTTTCAGTaGAAAAGCACAGGGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: VLLWTELRTSYPVLTCCQSKEFQ*KSTGNK Trigger: TTTGTTCCCTGTGCTTTTCCACTGAAACTCTTTTGA...TTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGCTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAACTGGTCTACAGTTTTaGAGATTCAAATGCAAAACC | + |
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Preference number: 2 (lower is better) Translates to: VLLWTELRTSYPVLTCCQTGLQF*RFKCKT Trigger: GGTTTTGCATTTGAATCTCCAAAACTGTAGACCAGT...TTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAACTTCTGGAGCCATTGTaGAACTGTCTTCTTAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LWTELRTSYPVLTCCQKKLLEPL*NCLLSE Trigger: TTCACTAAGAAGACAGTTTCACAATGGCTCCAGAAG...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAAATGGAGCATGTATACTaGTTCAGAACAGTTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LWTELRTSYPVLTCCQKKMEHVY*FRTVEG Trigger: CCCTTCAACTGTTCTGAACCAGTATACATGCTCCAT...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACACACACAGAAATTCATaGGAGTATATGTCCATAACC | + |
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Preference number: 2 (lower is better) Translates to: SRENISSQKAVVCHSVSHTHRNS*EYMSIT Trigger: GGTTATGGACATATACTCCCATGAATTTCTGTGTGT...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAATAGTTTTTCTCCACCATaGCATTGTACAGTTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: FGLNSELPILFLPVAKRNSFSPP*HCTVPH Trigger: ATGTGGAACTGTACAATGTCATGGTGGAGAAAAACT...ATTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGGCTACTGCCCTGAGTTTGCCAGTCACAGGGTGGGGGCTCAGGCCTTATGTCAGTCCAGCCACATaGGCCCTGGTGGACTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KLATALSLPVTGWGLRPYVSPAT*ALVDCW Trigger: CCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGAC...ATAAGGCCTGAGCCCCCACCCTGTGACTGGCAAACTCAGGGCAGTAGCCAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | ACGGCTGCGTTAGCCACATGGTCAGTCCAGCCACATTaGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TAALATWSVQPH*PWWTAGSPGPA Trigger: TGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGACCATGTGGCTAACGCAGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | GAGGGCTTAGAGAGATGGCTCAGTAGTTCAGAGCACTaGCTGCTCTGCCAGAGGACTCAGGATGTCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: EGLERWLSSSEH*LLCQRTQDVTI Trigger: GATGGTGACATCCTGAGTCCTCTGGCAGAGCAGCCAGTGCTCTGAACTACTGAGCCATCTCTCTAAGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR CCA 72 bp | GGGGGCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTaGCTGTCCCAGAACTCACTCTGTGCACTAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GGFSRQGFSVYP*LSQNSLCALDW Trigger: CCAGTCTAGTGCACAGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACTACCCAATCGACACTCCACTTTTCTaGCTTATAGTCCTTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LALVDCWISRTSISHYPIDTPLF*LIVLVH Trigger: GTGAACAAGGACTATAAGCAAGAAAAGTGGAGTGTC...GATTGGGTAGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCATCACATTGATAGGACTTCTGCCTCTTTGCTTCTCCCTGATGCTCAACAGAGATCAAGGCCAGCCTaGTCCACACAGAGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: THHIDRTSASLLLPDAQQRSRPA*STQSSR Trigger: CCTGGAGCTCTGTGTGGACAAGGCTGGCCTTGATCT...CTGTTGAGCATCAGGGAGAAGCAAAGAGGCAGAAGTCCTATCAATGTGATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | CTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTGTaGACTAGACTGGCCTCAAACTCAGAGATATACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCVPLAVPELTL*TRLASNSEIYL Trigger: CAGGTATATCTCTGAGTTTGAGGCCAGTCTAGTGCACAGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATGCTCAACAGGACTGGAGGGCATTTCTGGATGCACCCCTACATCTTTACACTGGTTCAGAACAGTaGAAGGGAACAGCAGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PDAQQDWRAFLDAPLHLYTGSEQ*KGTAVR Trigger: CCTAACTGCTGTTCCCTTCAACTGTTCTGAACCAGT...GTAAAGATGTAGGGGTGCATCCAGAAATGCCCTCCAGTCCTGTTGAGCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | ACAATACTTAGGTTAGTAACCTTCATGTCCACCCTCTaGCAAGCTGGCTACTGCCCTGAGTTTGCCAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TILRLVTFMSTL*QAGYCPEFASH Trigger: GTGACTGGCAAACTCAGGGCAGTAGCCAGCTTGGCAGAGGGTGGACATGAAGGTTACTAACCTAAGTATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR TCA 72 bp | ATGCTAGGTTTACAGGTATGTGCCACCCCACCCAGATaGAGGCTGCTTTTCTACATCATAGGTACCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: MLGLQVCATPPR*RLLFYIIGTLR Trigger: CCTAAGGGTACCTATGATGTAGAAAAGCAGCCTTCATCTGGGTGGGGTGGCACATACCTGTAAACCTAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR GCA 72 bp | TGTCTCTGCTTCCCAAATGCTAGGTTTACAGGTATGTaGCACCCCACCCAGATGAAGGCTGCTTTTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: CLCFPNARFTGM*HPTQMKAAFLH Trigger: ATGTAGAAAAGCAGCCTTCATCTGGGTGGGGTGGCACATACCTGTAAACCTAGCATTTGGGAAGCAGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR TCA 72 bp | AACAAATCAAAACAAAGGAATACAGGGGCTGGGCTGTaGTGTAAAGGACAGACGGCTAGTTACTGGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NKSKQRNTGAGL*CKGQTASYWEP Trigger: TGGCTCCCAGTAACTAGCCGTCTGTCCTTTACATCACAGCCCAGCCCCTGTATTCCTTTGTTTTGATTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | CATGTCTCCAAAAAGATGTTAGGCCATGTGTGGTGGTaGTTTGAATCTCAGCTCTTGAGAGGAGAACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HVSKKMLGHVWW*FESQLLRGEPG Trigger: ACCTGGTTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAACATCTTTTTGGAGACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | CCACATGTCTCCAAAAAGATGTTAGGCCATGTGTGGTaGTGCTTTGAATCTCAGCTCTTGAGAGGAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PHVSKKMLGHVW*CFESQLLRGEP Trigger: TGGTTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAACATCTTTTTGGAGACATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | GGGTTCTCTTGTGGACCAGGAGCTGGGAACTCTGAATaGACGCTCTTACACATTCATTTCCTTTATAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GFSCGPGAGNSE*TLLHIHFLYKA Trigger: AGCCTTATAAAGGAAATGAATGTGTAAGAGCGTCCATTCAGAGTTCCCAGCTCCTGGTCCACAAGAGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACTTTCTCTGTGTACCCTaGGCTGTCCCAGAACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SRENISSQKAVVCHSVSHFLCVP*AVPELT Trigger: AGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAA...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCATCACATTGATAGGACTTCTGCCTCTTTGCTTCTCCCTGATGCTCAACAGAGTCTAATCACTGCCTaGGTCAGAGTTCTTTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: THHIDRTSASLLLPDAQQSLITA*VRVLSR Trigger: CCTAGAAAGAACTCTGACCAAGGCAGTGATTAGACT...CTGTTGAGCATCAGGGAGAAGCAAAGAGGCAGAAGTCCTATCAATGTGATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR TCA 72 bp | GGAAGCCACGGTGCAGTCAGAGCTGAGAAGAAGCTATaGTACGGACAGTTTCAGAATTCAAAAGAGTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSHGAVRAEKKL*YGQFQNSKEFQ Trigger: CTGAAACTCTTTTGAATTCTGAAACTGTCCGTATCATAGCTTCTTCTCAGCTCTGACTGCACCGTGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | TGCAGCAGCCACTCATGGTTATCAACAGATACCAAATaGTGGCTCCTTTTAAACCATGATGCAAAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSSHSWLSTDTK*WLLLNHDAKRP Trigger: TGGCCTCTTTGCATCATGGTTTAAAAGGAGCCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | TTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTaGCGTGGAACTTGCTATGTAGTCCAAGTTGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: FPPPLKTVIKHG*RGTCYVVQVDL Trigger: AAGGTCAACTTGGACTACATAGCAAGTTCCACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR CCA 72 bp | AGCAGCCACTCATGGTTATCAACAGATACCAAATGCTaGCTCCTTTTAAACCATGATGCAAAGAGGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHSWLSTDTKC*LLLNHDAKRPS Trigger: GCTTGGCCTCTTTGCATCATGGTTTAAAAGGAGCCAGCATTTGGTATCTGTTGATAACCATGAGTGGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | ACTGGTCTACAGTTTTGGAGATTCAAATGCAAAACCTaGGGAAAGCTGCAGCAGCCACTCATGGTTATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TGLQFWRFKCKT*GKLQQPLMVIN Trigger: GTTGATAACCATGAGTGGCTGCTGCAGCTTTCCCCAGGTTTTGCATTTGAATCTCCAAAACTGTAGACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | GTTCCACATGTCTCCAAAAAGATGTTAGGCCATGTGTaGTGGTGCTTTGAATCTCAGCTCTTGAGAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPHVSKKMLGHV*WCFESQLLRGE Trigger: TTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAACATCTTTTTGGAGACATGTGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACATAGCTCAGTGGTTATaGCAGAGGACCCAGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRENISSQKAVVCHSVSHIAQWL*QRTQVQ Trigger: TTGAACCTGGGTCCTCTGCAATAACCACTGAGCTAT...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAAACAGAGCTAAGTCGGTaGAGAGAGGGAGGAAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWTELRTSYPVLTCCQKKTELSR*REGGKV Trigger: AACCTTTCCTCCCTCTCTCAACCGACTTAGCTCTGT...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | AAGCAGAGTACTTGCCATCTGGCACAAGGACCTGAATaGATATCTCCAGAATACACACAGAAATTCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KQSTCHLAQGPE*ISPEYTQKFMG Trigger: TCCCATGAATTTCTGTGTGTATTCTGGAGATATGCATTCAGGTCCTTGTGCCAGATGGCAAGTACTCTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR GCA 72 bp | TTGAAGACAGTGATTAAACATGGCTGGCGTGGAACTTaGTATGTAGTCCAAGTTGACCTTGGACTCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKTVIKHGWRGT*YVVQVDLGLTK Trigger: CTTTGTGAGTCCAAGGTCAACTTGGACTACATAGCAAGTTCCACGCCAGCCATGTTTAATCACTGTCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR CCA 72 bp | TCTAGCTTATCTGTAGCTTGTCATCAGCATCTTTTGTaGCCTGGGCCAATGATTTCTAAAGCACAGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSLSVACHQHLL*PGPMISKAQRR Trigger: TCTCCTCTGTGCTTTAGAAATCATTGGCCCAGGCCACAAAAGATGCTGATGACAAGCTACAGATAAGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR GCA 72 bp | GATGTGTCAAGCGAATGTGATCCTTTAGAAATGTCCTaGTTTGGACTGAACTCAGAACTTCCTATCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DVSSECDPLEMS*FGLNSELPILF Trigger: GAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGACATTTCTAAAGGATCACATTCGCTTGACACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACACCTTCCCACCTCCTTaGAAGACAGTGATTAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SRENISSQKAVVCHSVSHTFPPP*KTVIKH Trigger: ATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGT...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAATTGTCATCAGCATCTTTaGTGGCCTGGGCCAATGATT | + |
|
Preference number: 3 (lower is better) Translates to: FGLNSELPILFLPVAKRNCHQHL*WPGPMI Trigger: AATCATTGGCCCAGGCCACAAAAGATGCTGATGACA...ATTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CCA 72 bp | AAGCGAGATTGTGTAGCACAGTGTTATATCATCTTCTaGAGCCATTGTGAAACTGTCTTCTTAGTGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KRDCVAQCYIIF*SHCETVFLVNG Trigger: GCCATTCACTAAGAAGACAGTTTCACAATGGCTCCAGAAGATGATATAACACTGTGCTACACAATCTCGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAACACTGGTCTACAGTTTaGGAGATTCAAATGCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LWTELRTSYPVLTCCQKKHWSTV*EIQMQN Trigger: GTTTTGCATTTGAATCTCCAAAACTGTAGACCAGTG...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR TCA 72 bp | ATGCAAAGAGGCCAAGCCCAGTGTGTATTTAACAAGTaGAACTATACAATACTTAGGTTAGTAACCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: MQRGQAQCVFNK*NYTILRLVTFM Trigger: CATGAAGGTTACTAACCTAAGTATTGTATAGTTTCACTTGTTAAATACACACTGGGCTTGGCCTCTTTGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CAA 72 bp | TACGGCTGCGTTAGCCACATGGTCAGTCCAGCCACATaGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YGCVSHMVSPAT*ALVDCWISRTS Trigger: GCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGACCATGTGGCTAACGCAGCCGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACATTGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACTAACAGTAGCCACTGCCTaGGCTCTGGGGTTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SHIGPGGLLDLQDQHFPLTVATA*ALGFPT Trigger: AGTGGGGAACCCCAGAGCCCAGGCAGTGGCTACTGT...TAGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR TCA 90 bp | CCTGATGCTCAACAGGACTGGAGGGCATTTCTGGATGCACCCCTACATCTTTACTCGCCAGTCTCAGGGTaGTGGAGCTGTACCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PDAQQDWRAFLDAPLHLYSPVSG*WSCTQV Trigger: GACCTGGGTACAGCTCCATCACCCTGAGACTGGCGA...GTAAAGATGTAGGGGTGCATCCAGAAATGCCCTCCAGTCCTGTTGAGCATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACTACCCAATCTGGCTTCCTGGTTCCTaGTTCACAGTCAAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LALVDCWISRTSISHYPIWLPGS*FTVKFP Trigger: GGGGAACTTGACTGTGAAGCAGGAACCAGGAAGCCA...GATTGGGTAGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGCTACTGCCCTGAGTTTGCCAGTCACAGGGTGGGGGCTCAGGCCTTATCCATGTCTGGCTTCCTaGTTCCTGCTTCACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLATALSLPVTGWGLRPYPCLAS*FLLHSQ Trigger: TTGACTGTGAAGCAGGAACCAGGAAGCCAGACATGG...ATAAGGCCTGAGCCCCCACCCTGTGACTGGCAAACTCAGGGCAGTAGCCAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTCCACTGCCTGGGCTCTaGGGTTCCCCACTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFQDKVSLCTLGCPRTHSPLPGL*GSPLWE Trigger: TTCCCAAAGTGGGGAACCCCAGAGCCCAGGCAGTGG...AGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTTCCCACTACCCAATCTGACACACACACCCAGACGTaGACTCAAGAAAAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWWTAGSPGPAFPTTQSDTHTQT*TQEKQS Trigger: GCTCTGTTTTTCTTGAGTCCACGTCTGGGTGTGTGT...GTCAGATTGGGTAGTGGGAAATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTAGAGAGGCCAGGCCGTaGTCATCTCTTACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFQDKVSLCTLGCPRTHSREARP*SSLTTS Trigger: GGAGGTGGTAAGAGATGAGCACGGCCTGGCCTCTCT...AGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGTCGCCAGTCTCAGGGTaGTGGAGCTGTACCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGSPVSG*WSCTQV Trigger: GACCTGGGTACAGCTCCATCACCCTGAGACTGGCGA...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGACAGTAGCCACTGCCTaGGCTCTGGGGTTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGTVATA*ALGFPT Trigger: AGTGGGGAACCCCAGAGCCCAGGCAGTGGCTACTGT...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTGTGTGGGTTCTCTTGTaGACCAGGAGCTGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AFQDKVSLCTLGCPRTHSVWVLL*TRSWEL Trigger: GAGTTCCCAGCTCCTGGTCCACAAGAGAACCCACAC...AGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACTTCACTGCCGTCTCCTaGGGCCTGGCCATCCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRENISSQKAVVCHSVSHFTAVS*GLAILS Trigger: GCTTAGGATGGCCAGGCCTCAGGAGACGGCAGTGAA...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCCAGCCACATTGGCCCTGGTGGACTGCTGGATCTCCAGGACCAGCATTCCCATCTTCTTTAAATaGACATCCTGTTCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSPATLALVDCWISRTSIPIFFK*TSCSCT Trigger: AGTACAAGAACAGGATGTGCATTTAAAGAAGATGGG...AATGCTGGTCCTGGAGATCCAGCAGTCCACCAGGGCCAATGTGGCTGGACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| CDS-3UTR CCA 90 bp | CCCCATTCTCCTAATCCCTCAAACACAGAGACCTTTACTCCCAGAACCCAAGGGTCACTAAGGTGTCTCTaGAAATCCTCCACCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHSPNPSNTETFTPRTQGSLRCL*KSSTIA Trigger: GGCTATGGTGGAGGATTTCCAGAGACACCTTAGTGA...CCCTTGGGTTCTGGGAGTAAAGGTCTCTGTGTTTGAGGGATTAGGAGAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CAA 72 bp | TACCACCTCCGTCTCACACAGGACACTCCACTTTTCTaGCTTATAGTCCTTGTTCACTGCCGTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YHLRLTQDTPLF*LIVLVHCRLLE Trigger: TTCCAGGAGACGGCAGTGAACAAGGACTATAAGCAAGAAAAGTGGAGTGTCCTGTGTGAGACGGAGGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
||
| 3UTR CAA 72 bp | ACGTGGCAATGGAGCATGTATACTGGTTCAGAACAGTaGAAGGGAACAGCAGTTAGGACACTGGACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWQWSMYTGSEQ*KGTAVRTLDWA Trigger: TGCCCAGTCCAGTGTCCTAACTGCTGTTCCCTTCAACTGTTCTGAACCAGTATACATGCTCCATTGCCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGGCTGCCTTCTTCATCTaGGGGATGCTCTTCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGAAFFI*GMLFPL Trigger: CAGAGGGAAGAGCATCCCTCAGATGAAGAAGGCAGC...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTGGACTTCTGCCTCTTTaGTTCTCCCTGATGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: AFQDKVSLCTLGCPRTHSGLLPL*FSLMLN Trigger: GTTGAGCATCAGGGAGAAGCAAAGAGGCAGAAGTCC...AGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR CAA 72 bp | TTAGGCCATGTGTGGTGGTGCTTTGAATCTCAGCTCTaGAGAGGAGAACCAGGTAGATCTCTGGGAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: LGHVWWCFESQL*RGEPGRSLGDQ Trigger: TTGATCTCCCAGAGATCTACCTGGTTCTCCTCTCAAGAGCTGAGATTCAAAGCACCACCACACATGGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTCAAGACAAGGTTTCTCTGTGTACCCTTGGCTGTCCCAGAACTCACTCTTGTCCTGCTTTGGACTaGACTCAGAACTTCCTATCC | + |
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Preference number: 4 (lower is better) Translates to: AFQDKVSLCTLGCPRTHSCPALD*TQNFLS Trigger: GGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGACA...AGAGTGAGTTCTGGGACAGCCAAGGGTACACAGAGAAACCTTGTCTTGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR TCA 90 bp | CAAGTTGACCTTGGACTCACAAAGATCTGTCTCTGCTTCCCAAATGCTAGGTTTCTCTTTGCTTCTCCCTaGTGCTCAACAGGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QVDLGLTKICLCFPNARFLFASP*CSTGLE Trigger: CTCCAGTCCTGTTGAGCATCAGGGAGAAGCAAAGAG...AAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTACTGGAGGGCATTTCTaGATGCACCCCTACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: VIPTFPPPLKTVIKHGWRTGGHF*MHPYIF Trigger: AAAGATGTAGGGGTGCATCCAGAAATGCCCTCCAGT...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGCCATGTCTGGCTTCCTaGTTCCTGCTTCACAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGPCLAS*FLLHSQ Trigger: TTGACTGTGAAGCAGGAACCAGGAAGCCAGACATGG...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR GCA 90 bp | TCCTCTAGAACCAGTGCACTCACAGGTACAGACATATACAAATACACTCCATTTTGGCTTCCTGGTTCCTaGTTCACAGTCAAGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SSRTSALTGTDIYKYTPFWLPGS*FTVKFP Trigger: GGGGAACTTGACTGTGAAGCAGGAACCAGGAAGCCA...AAATGGAGTGTATTTGTATATGTCTGTACCTGTGAGTGCACTGGTTCTAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGTCACTAAGGTGTCTCTaGAAATCCTCCACCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGSLRCL*KSSTIA Trigger: GGCTATGGTGGAGGATTTCCAGAGACACCTTAGTGA...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCTGTTGCCAAAAGAAAAGGCGCTACCTTAGGTaGGTAGGTCTGCAGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LWTELRTSYPVLTCCQKKRRYLR*VGLQVN Trigger: ATTCACCTGCAGACCTACCCACCTAAGGTAGCGCCT...TTTCTTTTGGCAACAGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS-3UTR GCA 90 bp | GTCATACCTACCTTCCCACCTCCTTTGAAGACAGTGATTAAACATGGCTGGCGTCCTTTAGAAATGTCCTaGTTTGGACTGAACTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VIPTFPPPLKTVIKHGWRPLEMS*FGLNSE Trigger: TTCTGAGTTCAGTCCAAAGCAGGACATTTCTAAAGG...ACGCCAGCCATGTTTAATCACTGTCTTCAAAGGAGGTGGGAAGGTAGGTATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGGAAGCGAGAGCTCTaGCTAAAAACTTTGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SRENISSQKAVVCHSVSHRKREL*LKTLPH Trigger: GTGTGGCAAAGTTTTTAGCCAGAGCTCTCGCTTCCT...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTGTTGTATGTCATAGTGTGTCCCACAGTATATCCCTATGTGAGTGGGGCTGGGAACTCTGAATaGACGCTCTTACACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: RKLLYVIVCPTVYPYVSGAGNSE*TLLHIH Trigger: ATGAATGTGTAAGAGCGTCCATTCAGAGTTCCCAGC...CCCACTCACATAGGGATATACTGTGGGACACACTATGACATACAACAGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| 3UTR CAA 72 bp | AAGTCTAGCTTATCTGTAGCTTGTCATCAGCATCTTTaGTGGCCTGGGCCAATGATTTCTAAAGCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KSSLSVACHQHL*WPGPMISKAQR Trigger: CCTCTGTGCTTTAGAAATCATTGGCCCAGGCCACAAAAGATGCTGATGACAAGCTACAGATAAGCTAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS-3UTR TCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACGTGCACAATAAGCTGTaGACTGTCACCAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SRENISSQKAVVCHSVSHVHNKL*TVTKGF Trigger: AAAGCCTTTGGTGACAGTTCACAGCTTATTGTGCAC...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACTCTTCATCTGAGGGATaGTCTTCCCTCTGTGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SRENISSQKAVVCHSVSHSSSEG*SSLCAK Trigger: TTTAGCACAGAGGGAAGAGCATCCCTCAGATGAAGA...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGAATACACACAGAAATTCATGGGAGTATATGTCCATAACCCTGGTGCAGAGAAATGTCCTGCTTTaGACTGAACTCAGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: LQNTHRNSWEYMSITLVQRNVLL*TELRTS Trigger: GGAAGTTCTGAGTTCAGTCCAAAGCAGGACATTTCT...CTGCACCAGGGTTATGGACATATACTCCCATGAATTTCTGTGTGTATTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR TCA 90 bp | CAAGTTGACCTTGGACTCACAAAGATCTGTCTCTGCTTCCCAAATGCTAGGTTTGACTTTTATTCCAAATaGATGCCTCGCCAGATTCAT | + |
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Preference number: 4 (lower is better) Translates to: QVDLGLTKICLCFPNARFDFYSK*MPRQIH Trigger: ATGAATCTGGCGAGGCATTCATTTGGAATAAAAGTC...AAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACTTTATTCCAAATGAATaGCTCGCCAGATTCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRENISSQKAVVCHSVSHFIPNE*LARFIR Trigger: CCTGATGAATCTGGCGAGGCATTCATTTGGAATAAA...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR GCA 90 bp | TCCTCTAGAACCAGTGCACTCACAGGTACAGACATATACAAATACACTCCATTTCCCATCTTCTTTAAATaGACATCCTGTTCTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: SSRTSALTGTDIYKYTPFPIFFK*TSCSCT Trigger: AGTACAAGAACAGGATGTGCATTTAAAGAAGATGGG...AAATGGAGTGTATTTGTATATGTCTGTACCTGTGAGTGCACTGGTTCTAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS CCA 90 bp | GAATCCCAGCCATTCCCCCAACCCAGACACACACACACCCAGACGTaGACTCAAGAAAAACAGAGCCACTCACCTGAGGCCTGGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: ESQPFPQPRHTHTQT*TQEKQSHSPEAWPS Trigger: GGATGGCCAGGCCTCAGGTGAGTGGCTCTGTTTTTCTTGAGTCCACGTCTGGGTGTGTGTGTGTCTGGGTTGGGGGAATGGCTGGGATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS GCA 90 bp | GTAGGCGACTGCTCAGCTGCACTCAGTGCTCCCATCTTCTTTAAATaGACATCCTGTTCTTGTACTGGAGGTGAGACCTCCCCTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: VGDCSAALSAPIFFK*TSCSCTGGETSPDS Trigger: TGAGTCAGGGGAGGTCTCACCTCCAGTACAAGAACAGGATGTGCATTTAAAGAAGATGGGAGCACTGAGTGCAGCTGAGCAGTCGCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063980.8 ENSMUST00000215872.2 |
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| CDS GCA 90 bp | AACTCAGAACTTCCTATCCTGTTCTTACCCAGAGAGGCCAGGCCGTaGTCATCTCTTACCACCTCCGTCTCACACAGGACACTCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: NSELPILFLPREARP*SSLTTSVSHRTLHF Trigger: AAAGTGGAGTGTCCTGTGTGAGACGGAGGTGGTAAGAGATGAGCACGGCCTGGCCTCTCTGGGTAAGAACAGGATAGGAAGTTCTGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CAA 90 bp | CAAGTTGACCTTGGACTCACAAAGATCTGTCTCTGCTTCCCAAATGCTAGGTTTCCAGTGTGGGTTCTCTaGTGGACCAGGAGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QVDLGLTKICLCFPNARFPVWVL*WTRSWE Trigger: TTCCCAGCTCCTGGTCCACAAGAGAACCCACACTGG...AAACCTAGCATTTGGGAAGCAGAGACAGATCTTTGTGAGTCCAAGGTCAACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS GCA 90 bp | CCCTCTGAGGATGTGTCAAGCGAATGTGATCCTTTAGAAATGTCCTaGTTTGGACTGAACTCAGAACTTCCTATCCTGTTCTTACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSEDVSSECDPLEMS*FGLNSELPILFLPR Trigger: TCTGGGTAAGAACAGGATAGGAAGTTCTGAGTTCAGTCCAAAGCAGGACATTTCTAAAGGATCACATTCGCTTGACACATCCTCAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CAA 90 bp | TCCTCTAGAACCAGTGCACTCACAGGTACAGACATATACAAATACACTCCATTTAGGACTTCTGCCTCTTaGCTTCTCCCTGATGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SSRTSALTGTDIYKYTPFRTSAS*LLPDAQ Trigger: TTGAGCATCAGGGAGAAGCAAAGAGGCAGAAGTCCT...AAATGGAGTGTATTTGTATATGTCTGTACCTGTGAGTGCACTGGTTCTAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CAA 90 bp | AGCAGAGAAAACATCTCATCACAGAAAGCTGTTGTATGTCATAGTGTGTCCCACGACACTCCACTTTTCTaGCTTATAGTCCTTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SRENISSQKAVVCHSVSHDTPLF*LIVLVH Trigger: GTGAACAAGGACTATAAGCAAGAAAAGTGGAGTGTC...GTGGGACACACTATGACATACAACAGCTTTCTGTGATGAGATGTTTTCTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS-3UTR CAA 90 bp | CTCCAGAATACACACAGAAATTCATGGGAGTATATGTCCATAACCCTGGTGCAGGTGAAGGACCTGATGTaGAATAAGACTTTTATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LQNTHRNSWEYMSITLVQVKDLM*NKTFIP Trigger: TGGAATAAAAGTCTTATTCAACATCAGGTCCTTCAC...CTGCACCAGGGTTATGGACATATACTCCCATGAATTTCTGTGTGTATTCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS CCA 72 bp | AGCACTAAGCAGGAGAGACAAAGGCGCTACCTTAGGTaGGTAGGTCTGCAGGTGAATCCCAGCCATTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: STKQERQRRYLR*VGLQVNPSHSP Trigger: GGGGGAATGGCTGGGATTCACCTGCAGACCTACCCACCTAAGGTAGCGCCTTTGTCTCTCCTGCTTAGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215872.2 |
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| CDS GCA 72 bp | CTTCCTATCCTGTTCTTACCCAGAGAGGCCAGGCCGTaGTCATCTCTTACCACCTCCGTCTCACACAGGACA | + |
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Preference number: 6 (lower is better) Translates to: LPILFLPREARP*SSLTTSVSHRT Trigger: TGTCCTGTGTGAGACGGAGGTGGTAAGAGATGAGCACGGCCTGGCCTCTCTGGGTAAGAACAGGATAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS GCA 72 bp | GACACTCCACTTTTCTTGCTTATAGTCCTTGTTCACTaGCGTCTCCTGAGGCCTGGCCATCCTAAGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: DTPLFLLIVLVH*RLLRPGHPKHS Trigger: ACTGTGCTTAGGATGGCCAGGCCTCAGGAGACGGCAGTGAACAAGGACTATAAGCAAGAAAAGTGGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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| CDS CAA 72 bp | TACCACCTCCGTCTCACACAGGACACTCCACTTTTCTaGCTTATAGTCCTTGTTCACTGCCGTCTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: YHLRLTQDTPLF*LIVLVHCRLLR Trigger: CCTCAGGAGACGGCAGTGAACAAGGACTATAAGCAAGAAAAGTGGAGTGTCCTGTGTGAGACGGAGGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063980.8 |
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