Pregenerated sensors for ZKSCAN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018347Ensembl transcript IDs: ENSMUST00000018491.8, ENSMUST00000071465.9
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTaGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGAC | + |
Preference number: 1 (lower is better) Translates to: PSSSPSNTQRGGGRF*SKLFQAEVSRLAVD Trigger: GTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR GCA 90 bp | AAACTAGACTCAACTCAGAACAACATCCCCTCCACATCAAAACAGTaGCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTT | + |
Preference number: 1 (lower is better) Translates to: KLDSTQNNIPSTSKQ*PAPLPPTHREEEVV Trigger: AACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTGGAGGGGATGTTGTTCTGAGTTGAGTCTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR CCA 90 bp | TCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTaGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAG | + |
Preference number: 1 (lower is better) Translates to: SPSVTACSRSQSGSH*RATKVIIYTACLSQ Trigger: CTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR-3UTR TCA 90 bp | TGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCATCTTCCAGGCAGAGGTaGGCAGGCTTGCAGTGGACT | + |
Preference number: 2 (lower is better) Translates to: CPAPLPPTHREEEVVSGPSSRQR*AGLQWT Trigger: AGTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGA...TGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR-3UTR GCA 90 bp | GTCGACCCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTTCCACATCAAAACAGTaGCCAGCTCCTCTCCCTCCA | + |
Preference number: 2 (lower is better) Translates to: VDPTSPSVTACSRSQSGSSTSKQ*PAPLPP Trigger: TGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTGGA...AGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGGGTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR-3UTR CCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGGGAGGAGGTCGTTTCTaGTCCAAGCTCTTCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: LIGELLKSLSTLHVFPRGGGGRF*SKLFQA Trigger: TGCCTGGAAGAGCTTGGACCAGAAACGACCTCCTCC...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR-3UTR GCA 90 bp | TCAGCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTTCCACATCAAAACAGTaGCCAGCTCCTCTCCCTCCA | + |
Preference number: 2 (lower is better) Translates to: SAQFISNKGQLDRNSVTSSTSKQ*PAPLPP Trigger: TGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTGGA...ACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR GCA 72 bp | CTCACAGTCGACCCTACCTCCCCTTCTGTGACAGCCTaGTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCT | + |
Preference number: 3 (lower is better) Translates to: LTVDPTSPSVTA*SRSQSGSHWRA Trigger: AGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGGGTCGACTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR CCA 72 bp | TCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTaGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTT | + |
Preference number: 3 (lower is better) Translates to: SPSNTQRGGGRF*SKLFQAEVSRL Trigger: AAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR GCA 72 bp | GACAGGAACTCTGTCACCAGTCTGACAAAGATGGCATaGACTCACAGTCGACCCTACCTCCCCTTCTGTGAC | + |
Preference number: 3 (lower is better) Translates to: DRNSVTSLTKMA*THSRPYLPFCD Trigger: GTCACAGAAGGGGAGGTAGGGTCGACTGTGAGTGCATGCCATCTTTGTCAGACTGGTGACAGAGTTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR GCA 72 bp | TCAACTCAGAACAACATCCCCTCCACATCAAAACAGTaGCCAGCTCCTCTCCCTCCAACACACAGAGAGGAG | + |
Preference number: 3 (lower is better) Translates to: STQNNIPSTSKQ*PAPLPPTHREE Trigger: CTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTGGAGGGGATGTTGTTCTGAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
3UTR CCA 72 bp | GTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTaGAGAGCTACTAAAGTCATTATCTACACTGCATGT | + |
Preference number: 3 (lower is better) Translates to: VTACSRSQSGSH*RATKVIIYTAC Trigger: ACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGACGGCTGGAGCTCCAGCTaGACTGCTTGCCACAGTGGG | + |
Preference number: 4 (lower is better) Translates to: GRFWSKLFQAEVSRLAVDGWSSS*TACHSG Trigger: CCCACTGTGGCAAGCAGTTCAGCTGGAGCTCCAGCC...GTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGGGCTGGAGCTCCAGCTaGACTGCTTGCCACAGTGGG | + |
Preference number: 4 (lower is better) Translates to: PTSPSVTACSRSQSGSHWGWSSS*TACHSG Trigger: CCCACTGTGGCAAGCAGTTCAGCTGGAGCTCCAGCC...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCGGGCTCCACCTCCAGTaGAGGCTCCAACTTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: PLPPTHREEEVVSGPSSSGLHLQ*RLQLVP Trigger: GGGGACAAGTTGGAGCCTGCACTGGAGGTGGAGCCC...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAGCCTCTCCTCAGGTCTaGCAGGAAGCTGGGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: CPAPLPPTHREEEVVSGPASPQV*QEAGKQ Trigger: CTGCTTCCCAGCTTCCTGCCAGACCTGAGGAGAGGC...TGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | GCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTGGGCCATGGGGGATCTaGCCTGTCCCTTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: APLPPTHREEEVVSGPSSGPWGI*PVPSER Trigger: CCTCTCAGAAGGGACAGGCCAGATCCCCCATGGCCC...AGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AGGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGAGGGCCATGGGGGATCTaGCCTGTCCCTTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: RSFLVQALPGRGEQACSGGPWGI*PVPSER Trigger: CCTCTCAGAAGGGACAGGCCAGATCCCCCATGGCCC...TCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCCAAGTGGGCAGTTTCTaGGCCATGGGGGATCTGGCC | + |
Preference number: 4 (lower is better) Translates to: SSSPSNTQRGGGRFWSKLQVGSF*AMGDLA Trigger: GGCCAGATCCCCCATGGCCCAGAAACTGCCCACTTG...GAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTTGGCATCCTCAGCCTTaGCCAGAAAAGGAAGCGGGC | + |
Preference number: 4 (lower is better) Translates to: QLLSLQHTERRRSFLVQAWHPQP*PEKEAG Trigger: GCCCGCTTCCTTTTCTGGCCAAGGCTGAGGATGCCA...AGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | GGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGACCTGTATGTGCTGACCTaGCTGTTTCCCAGAGCCCCT | + |
Preference number: 4 (lower is better) Translates to: GRFWSKLFQAEVSRLAVDLYVLT*LFPRAP Trigger: AGGGGCTCTGGGAAACAGCCAGGTCAGCACATACAG...GTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAGGTAACGAAACTGCCTaGAAAGCTGGCGAGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: CPAPLPPTHREEEVVSGPGNETA*KAGEQS Trigger: AGACTGCTCGCCAGCTTTTCAGGCAGTTTCGTTACC...TGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGGTGGTGGCGCAAGCCTaGGAAGTCACTGAAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: PTSPSVTACSRSQSGSHWVVAQA*EVTEAF Trigger: AAAGGCTTCAGTGACTTCTCAGGCTTGCGCCACCAC...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | GTCGACCCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTAACTGCCTGAAAAGCTaGCGAGCAGTCTCAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: VDPTSPSVTACSRSQSGSNCLKS*RAVSGL Trigger: CAACCCTGAGACTGCTCGCCAGCTTTTCAGGCAGTT...AGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGGGTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCTCCTGTCCACTGCCTaGACACTGCTTCCTCACCCA | + |
Preference number: 4 (lower is better) Translates to: SSPSNTQRGGGRFWSKLFLLSTA*TLLPHP Trigger: TGGGTGAGGAAGCAGTGTCCAGGCAGTGGACAGGAG...GAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCGGTCTGGCAGGAAGCTaGGAAGCAGCCAGAGCTAAT | + |
Preference number: 4 (lower is better) Translates to: PLPPTHREEEVVSGPSSSGLAGS*EAARAN Trigger: ATTAGCTCTGGCTGCTTCCCAGCTTCCTGCCAGACC...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTGGTAACGAAACTGCCTaGAAAGCTGGCGAGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: QLLSLQHTERRRSFLVQAGNETA*KAGEQS Trigger: AGACTGCTCGCCAGCTTTTCAGGCAGTTTCGTTACC...AGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | AGGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGATGGTGGAGCCTCACCTaGTGCCTGACAGAAAACATC | + |
Preference number: 4 (lower is better) Translates to: RSFLVQALPGRGEQACSGWWSLT*CLTENI Trigger: GATGTTTTCTGTCAGGCATCAGGTGAGGCTCCACCA...TCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCCCAAGTGTGATCTCTaGTGCTTGTCAAGGCTGGAG | + |
Preference number: 4 (lower is better) Translates to: QLLSLQHTERRRSFLVQAPKCDL*CLSRLE Trigger: CTCCAGCCTTGACAAGCATCAGAGATCACACTTGGG...AGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTCCCAAGTGTGATCTCTaGTGCTTGTCAAGGCTGGAG | + |
Preference number: 4 (lower is better) Translates to: APLPPTHREEEVVSGPSSPKCDL*CLSRLE Trigger: CTCCAGCCTTGACAAGCATCAGAGATCACACTTGGG...AGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | AGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTGGGTGCTGATCCAGTaGCACAGTTTCTGGGGTTCT | + |
Preference number: 4 (lower is better) Translates to: SSSPSNTQRGGGRFWSKLWVLIQ*HSFWGS Trigger: AGAACCCCAGAAACTGTGGCACTGGATCAGCACCCA...GAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTGAGCAGTCTCAGGGTTaGCAAGCTCTCTTTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGEQSQG*QALFAG Trigger: CCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTC...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGGCTGTTCCCAACTCTTaGTCTCTAACAGGCCTCTCC | + |
Preference number: 4 (lower is better) Translates to: PTSPSVTACSRSQSGSHWAVPNS*SLTGLS Trigger: GGAGAGGCCTGTTAGAGACCAAGAGTTGGGAACAGC...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCGCTGTTCCCAACTCTTaGTCTCTAACAGGCCTCTCC | + |
Preference number: 4 (lower is better) Translates to: PLPPTHREEEVVSGPSSSAVPNS*SLTGLS Trigger: GGAGAGGCCTGTTAGAGACCAAGAGTTGGGAACAGC...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | GGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGACGTTTTCCAGAGCCTCTaGGACACTGTCTCCTCCAAA | + |
Preference number: 4 (lower is better) Translates to: GRFWSKLFQAEVSRLAVDVFQSL*DTVSSK Trigger: TTTGGAGGAGACAGTGTCCCAGAGGCTCTGGAAAAC...GTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCACACACTCTCTGCAAGTaGGCAGTTTCTGGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: LSLQHTERRRSFLVQALPHTLCK*AVSGPW Trigger: CCATGGCCCAGAAACTGCCCACTTGCAGAGAGTGTG...TGGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAATGCCTGCTACTCCTaGGACCATTTTCCCATAGGT | + |
Preference number: 4 (lower is better) Translates to: CPAPLPPTHREEEVVSGPNACYS*DHFPIG Trigger: ACCTATGGGAAAATGGTCTCAGGAGTAGCAGGCATT...TGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GTCGACCCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTAATGCCTGCTACTCCTaGGACCATTTTCCCATAGGT | + |
Preference number: 4 (lower is better) Translates to: VDPTSPSVTACSRSQSGSNACYS*DHFPIG Trigger: ACCTATGGGAAAATGGTCTCAGGAGTAGCAGGCATT...AGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGGGTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTTGGTGGAGCCTCACCTaGTGCCTGACAGAAAACATC | + |
Preference number: 4 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGWWSLT*CLTENI Trigger: GATGTTTTCTGTCAGGCATCAGGTGAGGCTCCACCA...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGACAGCCTGAGAAGTCACTaGAGCCTTTCCCACAGTAAT | + |
Preference number: 4 (lower is better) Translates to: GRFWSKLFQAEVSRLAVDSLRSH*SLSHSN Trigger: ATTACTGTGGGAAAGGCTTCAGTGACTTCTCAGGCT...GTCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | TCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCTGGGTGCTGATCCAGTaGCACAGTTTCTGGGGTTCT | + |
Preference number: 4 (lower is better) Translates to: SSPSNTQRGGGRFWSKLFWVLIQ*HSFWGS Trigger: AGAACCCCAGAAACTGTGGCACTGGATCAGCACCCA...GAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AGGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGAGCAAGCTCTCTTTGCTaGGTAGCATCTGATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: RSFLVQALPGRGEQACSGASSLC*VASDAE Trigger: CTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGC...TCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCTCTTGTCCTAGAACTTaGGTGCTGATCCAGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PLPPTHREEEVVSGPSSSSCPRT*VLIQCH Trigger: GTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGA...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGTGGATTTTCTCGTGGTaGCGCAAGCCTGAGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: PTSPSVTACSRSQSGSHWWIFSW*RKPEKS Trigger: TGACTTCTCAGGCTTGCGCCACCACGAGAAAATCCA...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTGTGTGGATTTTCTCGTaGTGGCGCAAGCCTGAGAAG | + |
Preference number: 4 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGVWIFS*WRKPEK Trigger: CTTCTCAGGCTTGCGCCACCACGAGAAAATCCACAC...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTTTGCTGGGTAGCATCTaGTGCAGAGAATGTGGCATC | + |
Preference number: 4 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGLLGSI*CRECGI Trigger: GATGCCACATTCTCTGCATCAGATGCTACCCAGCAA...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GTCGACCCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTTTGCAAATGTGGCAATaGAAGTATGTCTCTCCCGTG | + |
Preference number: 4 (lower is better) Translates to: VDPTSPSVTACSRSQSGSLQMWQ*KYVSPV Trigger: CACGGGAGAGACATACTTTCATTGCCACATTTGCAA...AGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGGGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | AGGTCGTTTCTGGTCCAAGCTCTTCCAGGCAGAGGTGAGCAGGCTTGCAGTGGACATCTTCCCCAAGTGTaGTCTCTGATGCTTGTCAAG | + |
Preference number: 4 (lower is better) Translates to: RSFLVQALPGRGEQACSGHLPQV*SLMLVK Trigger: CTTGACAAGCATCAGAGATCACACTTGGGGAAGATG...TCCACTGCAAGCCTGCTCACCTCTGCCTGGAAGAGCTTGGACCAGAAACGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | CAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTGTTTGGAGTTGGAAATaGCTGCTACTCCTGAGACCA | + |
Preference number: 4 (lower is better) Translates to: QLLSLQHTERRRSFLVQAVWSWK*LLLLRP Trigger: TGGTCTCAGGAGTAGCAGGCATTTCCAACTCCAAAC...AGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | AGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCCTTGTCTGTCTTCTTTaGAGGGGAGTCTTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: SSSPSNTQRGGGRFWSKLLVCLL*RGVLPS Trigger: AGATGGCAAGACTCCCCTGCAAAGAAGACAGACAAG...GAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCCTTGTCTGTCTTCTTTaGAGGGGAGTCTTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: PLPPTHREEEVVSGPSSSLVCLL*RGVLPS Trigger: AGATGGCAAGACTCCCCTGCAAAGAAGACAGACAAG...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTTTTTCCCACACTCTCTaGAAGTGGGCAGTTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGFSHTL*KWAVSG Trigger: CCCAGAAACTGCCCACTTGCAGAGAGTGTGGGAAAA...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCACAGTGCCACAGTTTCTaGGGTTCTCCCTTCAAGCTT | + |
Preference number: 4 (lower is better) Translates to: LSLQHTERRRSFLVQALPQCHSF*GSPFKL Trigger: AAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTG...TGGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCAGTCAGGTTTGGAGTTaGAAATGCCTGCTACTCCTG | + |
Preference number: 4 (lower is better) Translates to: SSSPSNTQRGGGRFWSKLSQVWS*KCLLLL Trigger: CAGGAGTAGCAGGCATTTCCAACTCCAAACCTGACT...GAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTGCCTCTCCTCAGGTCTaGCAGGAAGCTGGGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: PALEASQALIGELLKSLSASPQV*QEAGKQ Trigger: CTGCTTCCCAGCTTCCTGCCAGACCTGAGGAGAGGC...AGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTTGTCTCAGGGTCTCCTaGGGCCCCGATAGCACCTGG | + |
Preference number: 4 (lower is better) Translates to: SRSQSGSHWRATKVIIYTCLRVS*GPDSTW Trigger: CCAGGTGCTATCGGGGCCCCAGGAGACCCTGAGACA...AGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTGGCAGTTTCTGGGCCATaGGGGATCTGGCCTGTCCCT | + |
Preference number: 4 (lower is better) Translates to: LEASQALIGELLKSLSTLAVSGP*GIWPVP Trigger: AGGGACAGGCCAGATCCCCCATGGCCCAGAAACTGC...CAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGATGGCATGCCAAGTGGGCAGTTTCTaGGCCATGGGGGATCTGGCC | + |
Preference number: 4 (lower is better) Translates to: NKGQLDRNSVTSLTKMACQVGSF*AMGDLA Trigger: GGCCAGATCCCCCATGGCCCAGAAACTGCCCACTTG...GCATGCCATCTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR GCA 90 bp | GCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGGGGCTCCACCTCCAGTaGAGGCTCCAACTTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: AQFISNKGQLDRNSVTSLGLHLQ*RLQLVP Trigger: GGGGACAAGTTGGAGCCTGCACTGGAGGTGGAGCCC...CAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTGGTCTGGCAGGAAGCTaGGAAGCAGCCAGAGCTAAT | + |
Preference number: 4 (lower is better) Translates to: PALEASQALIGELLKSLSGLAGS*EAARAN Trigger: ATTAGCTCTGGCTGCTTCCCAGCTTCCTGCCAGACC...AGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTAACTGCCTGAAAAGCTaGCGAGCAGTCTCAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: PALEASQALIGELLKSLSNCLKS*RAVSGL Trigger: CAACCCTGAGACTGCTCGCCAGCTTTTCAGGCAGTT...AGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCACACTCTCTGCAAGTaGGCAGTTTCTGGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: LEASQALIGELLKSLSTLHTLCK*AVSGPW Trigger: CCATGGCCCAGAAACTGCCCACTTGCAGAGAGTGTG...CAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTGCCTCACCTGATGCCTaGCAGAAAACATCCAGACAT | + |
Preference number: 4 (lower is better) Translates to: PALEASQALIGELLKSLSASPDA*QKTSRH Trigger: ATGTCTGGATGTTTTCTGTCAGGCATCAGGTGAGGC...AGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTGCAAGCTCTCTTTGCTaGGTAGCATCTGATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: PALEASQALIGELLKSLSASSLC*VASDAE Trigger: CTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGC...AGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGTGTCTCAGGGTCTCCTaGGGCCCCGATAGCACCTGG | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKCLRVS*GPDSTW Trigger: CCAGGTGCTATCGGGGCCCCAGGAGACCCTGAGACA...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGCAGTGCCACAGTTTCTaGGGTTCTCCCTTCAAGCTT | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGQCHSF*GSPFKL Trigger: AAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTG...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGTCTTGTCCTAGAACTTaGGTGCTGATCCAGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGSCPRT*VLIQCH Trigger: GTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGA...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TCAGCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTGCAGTTTCTGGGCCATaGGGGATCTGGCCTGTCCCT | + |
Preference number: 4 (lower is better) Translates to: SAQFISNKGQLDRNSVTSAVSGP*GIWPVP Trigger: AGGGACAGGCCAGATCCCCCATGGCCCAGAAACTGC...ACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGCATCCCTGGTCCCTGTaGTTTTCCAAGTTTAGGTTC | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGHPWSL*FSKFRF Trigger: GAACCTAAACTTGGAAAATCACAGGGACCAGGGATG...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGAGCCTGAGAAGTCACTaGAGCCTTTCCCACAGTAAT | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGSLRSH*SLSHSN Trigger: ATTACTGTGGGAAAGGCTTCAGTGACTTCTCAGGCT...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | GCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGGTGGTGGCGCAAGCCTaGGAAGTCACTGAAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: AQFISNKGQLDRNSVTSLVVAQA*EVTEAF Trigger: AAAGGCTTCAGTGACTTCTCAGGCTTGCGCCACCAC...CAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TCAGCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTCCTGTCCACTGCCTaGACACTGCTTCCTCACCCA | + |
Preference number: 4 (lower is better) Translates to: SAQFISNKGQLDRNSVTSLLSTA*TLLPHP Trigger: TGGGTGAGGAAGCAGTGTCCAGGCAGTGGACAGGAG...ACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGAGTCAGGTTTGGAGTTaGAAATGCCTGCTACTCCTG | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGSQVWS*KCLLLL Trigger: CAGGAGTAGCAGGCATTTCCAACTCCAAACCTGACT...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGATGGCATGCGTTTTCCAGAGCCTCTaGGACACTGTCTCCTCCAAA | + |
Preference number: 4 (lower is better) Translates to: NKGQLDRNSVTSLTKMACVFQSL*DTVSSK Trigger: TTTGGAGGAGACAGTGTCCCAGAGGCTCTGGAAAAC...GCATGCCATCTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | AATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGATGGCATGCTGGATTTTCTCGTGGTaGCGCAAGCCTGAGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: NKGQLDRNSVTSLTKMACWIFSW*RKPEKS Trigger: TGACTTCTCAGGCTTGCGCCACCACGAGAAAATCCA...GCATGCCATCTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCCTCACCTGATGCCTaGCAGAAAACATCCAGACAT | + |
Preference number: 4 (lower is better) Translates to: SRSQSGSHWRATKVIIYTASPDA*QKTSRH Trigger: ATGTCTGGATGTTTTCTGTCAGGCATCAGGTGAGGC...AGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATGTCTTTCCCAGGGGGTTGCAAATGTGGCAATaGAAGTATGTCTCTCCCGTG | + |
Preference number: 4 (lower is better) Translates to: LIGELLKSLSTLHVFPRGLQMWQ*KYVSPV Trigger: CACGGGAGAGACATACTTTCATTGCCACATTTGCAA...CCCCCTGGGAAAGACATGCAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | CTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTGCATCTTCCCCAAGTGTaGTCTCTGATGCTTGTCAAG | + |
Preference number: 4 (lower is better) Translates to: LEASQALIGELLKSLSTLHLPQV*SLMLVK Trigger: CTTGACAAGCATCAGAGATCACACTTGGGGAAGATG...CAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGTGGCATCCTCAGCCTTaGCCAGAAAAGGAAGCGGGC | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKWHPQP*PEKEAG Trigger: GCCCGCTTCCTTTTCTGGCCAAGGCTGAGGATGCCA...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGCTGTATGTGCTGACCTaGCTGTTTCCCAGAGCCCCT | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKLYVLT*LFPRAP Trigger: AGGGGCTCTGGGAAACAGCCAGGTCAGCACATACAG...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TCAGCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTTTGCTGGGTAGCATCTaGTGCAGAGAATGTGGCATC | + |
Preference number: 4 (lower is better) Translates to: SAQFISNKGQLDRNSVTSLLGSI*CRECGI Trigger: GATGCCACATTCTCTGCATCAGATGCTACCCAGCAA...ACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGGTGTGGATTTTCTCGTaGTGGCGCAAGCCTGAGAAG | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKVWIFS*WRKPEK Trigger: CTTCTCAGGCTTGCGCCACCACGAGAAAATCCACAC...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGCTAGAACTTGGGTGCTaGTCCAGTGCCACAGTTTCT | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKLELGC*SSATVS Trigger: AGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAG...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR TCA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGCATCCCTGGTCCCTGTaGTTTTCCAAGTTTAGGTTC | + |
Preference number: 4 (lower is better) Translates to: FISNKGQLDRNSVTSLTKHPWSL*FSKFRF Trigger: GAACCTAAACTTGGAAAATCACAGGGACCAGGGATG...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 90 bp | GAGATGCGCCCCAGTTCCCTCACCCTGATGGTTTTCCAGAGCCTCTaGGACACTGTCTCCTCCAAAGCGATGCGGCTCACTCTCACCGAA | + |
Preference number: 5 (lower is better) Translates to: EMRPSSLTLMVFQSL*DTVSSKAMRLTLTE Trigger: TTCGGTGAGAGTGAGCCGCATCGCTTTGGAGGAGACAGTGTCCCAGAGGCTCTGGAAAACCATCAGGGTGAGGGAACTGGGGCGCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCGTGGCATCCTCAGCCTaGGCCAGAAAAGGAAGCGGG | + |
Preference number: 5 (lower is better) Translates to: PLPPTHREEEVVSGPSSSVASSA*ARKGSG Trigger: CCCGCTTCCTTTTCTGGCCAAGGCTGAGGATGCCAC...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCAGTGCAGGCTCCAACTaGTCCCCAGGGCAGTGTGTC | + |
Preference number: 5 (lower is better) Translates to: PLPPTHREEEVVSGPSSSSAGSN*SPGQCV Trigger: GACACACTGCCCTGGGGACAAGTTGGAGCCTGCACT...GGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 90 bp | TCAGGGTCTCCTGGGGCCCCGATAGCACCTGGTAACGAAACTGCCTaGAAAGCTGGCGAGCAGTCTCAGGGTTGGCAAGCTCTCTTTGCT | + |
Preference number: 5 (lower is better) Translates to: SGSPGAPIAPGNETA*KAGEQSQGWQALFA Trigger: AGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGCCAGCTTTTCAGGCAGTTTCGTTACCAGGTGCTATCGGGGCCCCAGGAGACCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 90 bp | CCACAGTTTCTGGGGTTCTCCCTTCAAGCTTTCCACGAGCGTCACTaGCTCCTGTCCACTGCCTGGACACTGCTTCCTCACCCACATCTG | + |
Preference number: 5 (lower is better) Translates to: PQFLGFSLQAFHERH*LLSTAWTLLPHPHL Trigger: CAGATGTGGGTGAGGAAGCAGTGTCCAGGCAGTGGACAGGAGGCAGTGACGCTCGTGGAAAGCTTGAAGGGAGAACCCCAGAAACTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 90 bp | CACTGCTCCTCCTGTAGTGGTGGGAGAACTGCTGTTCCCAACTCTTaGTCTCTAACAGGCCTCTCCTCAGGTCTGGCAGGAAGCTGGGAA | + |
Preference number: 5 (lower is better) Translates to: HCSSCSGGRTAVPNS*SLTGLSSGLAGSWE Trigger: TTCCCAGCTTCCTGCCAGACCTGAGGAGAGGCCTGTTAGAGACCAAGAGTTGGGAACAGCAGTTCTCCCACCACTACAGGAGGAGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CACATCAAAACAGTGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGAGCAGTCTCAGGGTaGGCAAGCTCTCTTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: HIKTVPSSSPSNTQRGGGRAVSG*ASSLCW Trigger: CCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCG...ACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCACTGTTTTGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 90 bp | CTGAAAAGCTGGCGAGCAGTCTCAGGGTTGGCAAGCTCTCTTTGCTaGGTAGCATCTGATGCAGAGAATGTGGCATCCTCAGCCTTGGCC | + |
Preference number: 5 (lower is better) Translates to: LKSWRAVSGLASSLC*VASDAENVASSALA Trigger: GGCCAAGGCTGAGGATGCCACATTCTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGCCAGCTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 90 bp | GCGAGCAGTCTCAGGGTTGGCAAGCTCTCTTTGCTGGGTAGCATCTaGTGCAGAGAATGTGGCATCCTCAGCCTTGGCCAGAAAAGGAAG | + |
Preference number: 5 (lower is better) Translates to: ASSLRVGKLSLLGSI*CRECGILSLGQKRK Trigger: CTTCCTTTTCTGGCCAAGGCTGAGGATGCCACATTCTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 90 bp | TGCCTGAAAAGCTGGCGAGCAGTCTCAGGGTTGGCAAGCTCTCTTTaGTGGGTAGCATCTGATGCAGAGAATGTGGCATCCTCAGCCTTG | + |
Preference number: 5 (lower is better) Translates to: CLKSWRAVSGLASSL*WVASDAENVASSAL Trigger: CAAGGCTGAGGATGCCACATTCTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGCCAGCTTTTCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 90 bp | CAAGGCAGTCAGTTCTCCCAAAGACGAGCTCTGTATGTGCTGACCTaGCTGTTTCCCAGAGCCCCTTTCATAAGGAAAGAGATGCGCCCC | + |
Preference number: 5 (lower is better) Translates to: QGSQFSQRRALYVLT*LFPRAPFIRKEMRP Trigger: GGGGCGCATCTCTTTCCTTATGAAAGGGGCTCTGGGAAACAGCCAGGTCAGCACATACAGAGCTCGTCTTTGGGAGAACTGACTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCCATGCTGTTCCCAACTCTaGGTCTCTAACAGGCCTCTC | + |
Preference number: 5 (lower is better) Translates to: LSLQHTERRRSFLVQALPCCSQL*VSNRPL Trigger: GAGAGGCCTGTTAGAGACCAAGAGTTGGGAACAGCA...TGGAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 90 bp | TGTCTGTCTTCTTTGCAGGGGAGTCTTGCCATCTTCTCAGCGCCGTaGAGGTGCAGGCCCACCAGCTCTTCCCCATATTCTGCTAAGTTA | + |
Preference number: 5 (lower is better) Translates to: CLSSLQGSLAIFSAP*RCRPTSSSPYSAKL Trigger: TAACTTAGCAGAATATGGGGAAGAGCTGGTGGGCCTGCACCTTCACGGCGCTGAGAAGATGGCAAGACTCCCCTGCAAAGAAGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 90 bp | AACTCTTGGTCTCTAACAGGCCTCTCCTCAGGTCTGGCAGGAAGCTaGGAAGCAGCCAGAGCTAATTCTGGCTCCATGTCTGATTCCTCT | + |
Preference number: 5 (lower is better) Translates to: NSWSLTGLSSGLAGS*EAARANSGSMSDSS Trigger: AGAGGAATCAGACATGGAGCCAGAATTAGCTCTGGCTGCTTCCCAGCTTCCTGCCAGACCTGAGGAGAGGCCTGTTAGAGACCAAGAGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGTCAGTAGCTCCCCAGTaGCTGAGGATGAATTCTGAA | + |
Preference number: 5 (lower is better) Translates to: PTSPSVTACSRSQSGSHWSVAPQ*LRMNSE Trigger: TTCAGAATTCATCCTCAGCAACTGGGGAGCTACTGA...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTAAGTCAGGTTTGGAGTaGGAAATGCCTGCTACTCCT | + |
Preference number: 5 (lower is better) Translates to: QLLSLQHTERRRSFLVQAKSGLE*EMPATP Trigger: AGGAGTAGCAGGCATTTCCAACTCCAAACCTGACTT...AGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCTCTTGTCTGTCTTCTTaGCAGGGGAGTCTTGCCATC | + |
Preference number: 5 (lower is better) Translates to: SSPSNTQRGGGRFWSKLFSCLSS*QGSLAI Trigger: GATGGCAAGACTCCCCTGCAAAGAAGACAGACAAGA...GAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 90 bp | CTCACCGAAGAAATCACTCAAGGCAGTCTGTGGTGGAGCCTCACCTaGTGCCTGACAGAAAACATCCAGACATCCCTGGTCCCTGTGATT | + |
Preference number: 5 (lower is better) Translates to: LTEEITQGSLWWSLT*CLTENIQTSLVPVI Trigger: AATCACAGGGACCAGGGATGTCTGGATGTTTTCTGTCAGGCATCAGGTGAGGCTCCACCACAGACTGCCTTGAGTGATTTCTTCGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCAAGCTCTTCTCAGTAGCTCCCCAGTaGCTGAGGATGAATTCTGAA | + |
Preference number: 5 (lower is better) Translates to: SSPSNTQRGGGRFWSKLFSVAPQ*LRMNSE Trigger: TTCAGAATTCATCCTCAGCAACTGGGGAGCTACTGA...GAAGAGCTTGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGTTAGTCAAGTCAGGTTaGGAGTTGGAAATGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: PTSPSVTACSRSQSGSHWLVKSG*ELEMPA Trigger: AGCAGGCATTTCCAACTCCAAACCTGACTTGACTAA...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TGCCCAGCTCCTCTCCCTCCAACACACAGAGAGGAGGAGGTCGTTTCTGGTCCACTCTTTGTCATTTTCTaGTCTGTCTTCTTTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: CPAPLPPTHREEEVVSGPLFVIF*SVFFAG Trigger: CCCTGCAAAGAAGACAGACAAGAAAATGACAAAGAG...TGGACCAGAAACGACCTCCTCCTCTCTGTGTGTTGGAGGGAGAGGAGCTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 90 bp | TTCTCGAATGGAATCTCTTGTCCTAGAACTTGGGTGCTGATCCAGTaGCACAGTTTCTGGGGTTCTCCCTTCAAGCTTTCCACGAGCGTC | + |
Preference number: 5 (lower is better) Translates to: FSNGISCPRTWVLIQ*HSFWGSPFKLSTSV Trigger: GACGCTCGTGGAAAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGAGATTCCATTCGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CCTACCTCCCCTTCTGTGACAGCCTGCTCTAGAAGCCAGTCAGGCTCTCATTGGCTCTTTGTCATTTTCTaGTCTGTCTTCTTTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: PTSPSVTACSRSQSGSHWLFVIF*SVFFAG Trigger: CCCTGCAAAGAAGACAGACAAGAAAATGACAAAGAG...CCAATGAGAGCCTGACTGGCTTCTAGAGCAGGCTGTCACAGAAGGGGAGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | GCTCAGTTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGGTGGCATCCTCAGCCTaGGCCAGAAAAGGAAGCGGG | + |
Preference number: 5 (lower is better) Translates to: AQFISNKGQLDRNSVTSLVASSA*ARKGSG Trigger: CCCGCTTCCTTTTCTGGCCAAGGCTGAGGATGCCAC...CAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAACTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTCGAGCAGTCTCAGGGTaGGCAAGCTCTCTTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: SRSQSGSHWRATKVIIYTRAVSG*ASSLCW Trigger: CCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCG...AGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 90 bp | AATTCTCCTTCTCGAATGGAATCTCTTGTCCTAGAACTTGGGTGCTaGTCCAGTGCCACAGTTTCTGGGGTTCTCCCTTCAAGCTTTCCA | + |
Preference number: 5 (lower is better) Translates to: NSPSRMESLVLELGC*SSATVSGVLPSSFP Trigger: TGGAAAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGAGATTCCATTCGAGAAGGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | CTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTGTGCTGTTCCCAACTCTaGGTCTCTAACAGGCCTCTC | + |
Preference number: 5 (lower is better) Translates to: LEASQALIGELLKSLSTLCCSQL*VSNRPL Trigger: GAGAGGCCTGTTAGAGACCAAGAGTTGGGAACAGCA...CAGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTTCTTGTCTGTCTTCTTaGCAGGGGAGTCTTGCCATC | + |
Preference number: 5 (lower is better) Translates to: SRSQSGSHWRATKVIIYTSCLSS*QGSLAI Trigger: GATGGCAAGACTCCCCTGCAAAGAAGACAGACAAGA...AGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TCTAGAAGCCAGTCAGGCTCTCATTGGAGAGCTACTAAAGTCATTATCTACACTTTAGTCAAGTCAGGTTaGGAGTTGGAAATGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: SRSQSGSHWRATKVIIYTLVKSG*ELEMPA Trigger: AGCAGGCATTTCCAACTCCAAACCTGACTTGACTAA...AGTGTAGATAATGACTTTAGTAGCTCTCCAATGAGAGCCTGACTGGCTTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS-3UTR CAA 90 bp | TTTATTTCAAATAAAGGACAGTTAGACAGGAACTCTGTCACCAGTCTGACAAAGAAGTCAGGTTTGGAGTaGGAAATGCCTGCTACTCCT | + |
Preference number: 5 (lower is better) Translates to: FISNKGQLDRNSVTSLTKKSGLE*EMPATP Trigger: AGGAGTAGCAGGCATTTCCAACTCCAAACCTGACTT...CTTTGTCAGACTGGTGACAGAGTTCCTGTCTAACTGTCCTTTATTTGAAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 72 bp | ATTCTGAAGGGGCAGGTCCTGAGGTGCCACTTCCAGTaGGGGCTCCACCTCCAGTGCAGGCTCCAACTTGTC | + |
Preference number: 6 (lower is better) Translates to: ILKGQVLRCHFQ*GLHLQCRLQLV Trigger: GACAAGTTGGAGCCTGCACTGGAGGTGGAGCCCTCACTGGAAGTGGCACCTCAGGACCTGCCCCTTCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 72 bp | CTGGGGTTCTCCCTTCAAGCTTTCCACGAGCGTCACTaGCTCCTGTCCACTGCCTGGACACTGCTTCCTCAC | + |
Preference number: 6 (lower is better) Translates to: LGFSLQAFHERH*LLSTAWTLLPH Trigger: GTGAGGAAGCAGTGTCCAGGCAGTGGACAGGAGGCAGTGACGCTCGTGGAAAGCTTGAAGGGAGAACCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | CCCAGTTCCCTCACCCTGATGGTTTTCCAGAGCCTCTaGGACACTGTCTCCTCCAAAGCGATGCGGCTCACT | + |
Preference number: 6 (lower is better) Translates to: PSSLTLMVFQSL*DTVSSKAMRLT Trigger: AGTGAGCCGCATCGCTTTGGAGGAGACAGTGTCCCAGAGGCTCTGGAAAACCATCAGGGTGAGGGAACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CAA 72 bp | TCCAGTGAGGGCTCCACCTCCAGTGCAGGCTCCAACTaGTCCCCAGGGCAGTGTGTCAAATTCTCCTTCTCG | + |
Preference number: 6 (lower is better) Translates to: SSEGSTSSAGSN*SPGQCVKFSFS Trigger: CGAGAAGGAGAATTTGACACACTGCCCTGGGGACAAGTTGGAGCCTGCACTGGAGGTGGAGCCCTCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 72 bp | CTCAGGGTTGGCAAGCTCTCTTTGCTGGGTAGCATCTaGTGCAGAGAATGTGGCATCCTCAGCCTTGGCCAG | + |
Preference number: 6 (lower is better) Translates to: LRVGKLSLLGSI*CRECGILSLGQ Trigger: CTGGCCAAGGCTGAGGATGCCACATTCTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 72 bp | TCCAGAGCCTCTGGGACACTGTCTCCTCCAAAGCGATaGGGCTCACTCTCACCGAAGAAATCACTCAAGGCA | + |
Preference number: 6 (lower is better) Translates to: SRASGTLSPPKR*GSLSPKKSLKA Trigger: TGCCTTGAGTGATTTCTTCGGTGAGAGTGAGCCGCATCGCTTTGGAGGAGACAGTGTCCCAGAGGCTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | TCTCTAACAGGCCTCTCCTCAGGTCTGGCAGGAAGCTaGGAAGCAGCCAGAGCTAATTCTGGCTCCATGTCT | + |
Preference number: 6 (lower is better) Translates to: SLTGLSSGLAGS*EAARANSGSMS Trigger: AGACATGGAGCCAGAATTAGCTCTGGCTGCTTCCCAGCTTCCTGCCAGACCTGAGGAGAGGCCTGTTAGAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 72 bp | GTCATTTTCTTGTCTGTCTTCTTTGCAGGGGAGTCTTaGCATCTTCTCAGCGCCGTGAAGGTGCAGGCCCAC | + |
Preference number: 6 (lower is better) Translates to: VIFLSVFFAGES*HLLSAVKVQAH Trigger: GTGGGCCTGCACCTTCACGGCGCTGAGAAGATGGCAAGACTCCCCTGCAAAGAAGACAGACAAGAAAATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | TGGCGAGCAGTCTCAGGGTTGGCAAGCTCTCTTTGCTaGGTAGCATCTGATGCAGAGAATGTGGCATCCTCA | + |
Preference number: 6 (lower is better) Translates to: WRAVSGLASSLC*VASDAENVASS Trigger: TGAGGATGCCACATTCTCTGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | CCTAGAACTTGGGTGCTGATCCAGTGCCACAGTTTCTaGGGTTCTCCCTTCAAGCTTTCCACGAGCGTCACT | + |
Preference number: 6 (lower is better) Translates to: PRTWVLIQCHSF*GSPFKLSTSVT Trigger: AGTGACGCTCGTGGAAAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CAA 72 bp | CGAAACTGCCTGAAAAGCTGGCGAGCAGTCTCAGGGTaGGCAAGCTCTCTTTGCTGGGTAGCATCTGATGCA | + |
Preference number: 6 (lower is better) Translates to: RNCLKSWRAVSG*ASSLCWVASDA Trigger: TGCATCAGATGCTACCCAGCAAAGAGAGCTTGCCAACCCTGAGACTGCTCGCCAGCTTTTCAGGCAGTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 72 bp | GAAATCACTCAAGGCAGTCTGTGGTGGAGCCTCACCTaGTGCCTGACAGAAAACATCCAGACATCCCTGGTC | + |
Preference number: 6 (lower is better) Translates to: EITQGSLWWSLT*CLTENIQTSLV Trigger: GACCAGGGATGTCTGGATGTTTTCTGTCAGGCATCAGGTGAGGCTCCACCACAGACTGCCTTGAGTGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CAA 72 bp | TGTCATTTTCTTGTCTGTCTTCTTTGCAGGGGAGTCTaGCCATCTTCTCAGCGCCGTGAAGGTGCAGGCCCA | + |
Preference number: 6 (lower is better) Translates to: CHFLVCLLCRGV*PSSQRREGAGP Trigger: TGGGCCTGCACCTTCACGGCGCTGAGAAGATGGCAAGACTCCCCTGCAAAGAAGACAGACAAGAAAATGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS GCA 72 bp | GGAATCTCTTGTCCTAGAACTTGGGTGCTGATCCAGTaGCACAGTTTCTGGGGTTCTCCCTTCAAGCTTTCC | + |
Preference number: 6 (lower is better) Translates to: GISCPRTWVLIQ*HSFWGSPFKLS Trigger: GGAAAGCTTGAAGGGAGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGAGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | CAGTTCTCCCAAAGACGAGCTCTGTATGTGCTGACCTaGCTGTTTCCCAGAGCCCCTTTCATAAGGAAAGAG | + |
Preference number: 6 (lower is better) Translates to: QFSQRRALYVLT*LFPRAPFIRKE Trigger: CTCTTTCCTTATGAAAGGGGCTCTGGGAAACAGCCAGGTCAGCACATACAGAGCTCGTCTTTGGGAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS TCA 72 bp | TCTCGAATGGAATCTCTTGTCCTAGAACTTGGGTGCTaGTCCAGTGCCACAGTTTCTGGGGTTCTCCCTTCA | + |
Preference number: 6 (lower is better) Translates to: SRMESLVLELGC*SSATVSGVLPS Trigger: TGAAGGGAGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGAGATTCCATTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |
||
CDS CCA 72 bp | TTCTCCTTCTCGAATGGAATCTCTTGTCCTAGAACTTaGGTGCTGATCCAGTGCCACAGTTTCTGGGGTTCT | + |
Preference number: 6 (lower is better) Translates to: FSFSNGISCPRT*VLIQCHSFWGS Trigger: AGAACCCCAGAAACTGTGGCACTGGATCAGCACCCAAGTTCTAGGACAAGAGATTCCATTCGAGAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018491.8 ENSMUST00000071465.9 |