Pregenerated sensors for ZKSCAN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055991Ensembl transcript IDs: ENSMUST00000031601.8, ENSMUST00000085671.10, ENSMUST00000161881.2, ENSMUST00000161896.2, ENSMUST00000162168.8
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTGCACCGTaGACTCTAAGTTGCCCTCCTTGGGCTCGTAATCCACAGGAGTGG | + |
Preference number: 1 (lower is better) Translates to: RPPSVGQLHRRPAAP*TLSCPPWARNPQEW Trigger: CCACTCCTGTGGATTACGAGCCCAAGGAGGGCAACTTAGAGTTCACGGTGCAGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR TCA 90 bp | GGCACCATGTCCTTCAGGTCGCTGACTTCGCCGGACTCTGGACGCTaGACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTGGG | + |
Preference number: 1 (lower is better) Translates to: GTMSFRSLTSPDSGR*TPFFSVRSAATQCG Trigger: CCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCGAAGTCAGCGACCTGAAGGACATGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR GCA 90 bp | TTCGCCGGACTCTGGACGCTGAACACCATTCTTTTCCGTGCGTTCTaGGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTGCAC | + |
Preference number: 1 (lower is better) Translates to: FAGLWTLNTILFRAF*GHPVWVSCIGDLLH Trigger: GTGCAGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR CCA 90 bp | CCACCTCGGCACCATGTCCTTCAGGTCGCTGACTTCGCCGGACTCTaGACGCTGAACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCA | + |
Preference number: 1 (lower is better) Translates to: PPRHHVLQVADFAGL*TLNTILFRAFCGHP Trigger: TGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCGAAGTCAGCGACCTGAAGGACATGGTGCCGAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR TCA 90 bp | AAGTGGGATTCACCTGCCACCTCGGCACCATGTCCTTCAGGTCGCTaGCTTCGCCGGACTCTGGACGCTGAACACCATTCTTTTCCGTGC | + |
Preference number: 1 (lower is better) Translates to: KWDSPATSAPCPSGR*LRRTLDAEHHSFPC Trigger: GCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCGAAGTCAGCGACCTGAAGGACATGGTGCCGAGGTGGCAGGTGAATCCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR GCA 90 bp | TTCTGCTTCCGGTTAACATCCGGACCTGAGCGCAGAGGTCTTTTCTaGCTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGGCACC | + |
Preference number: 1 (lower is better) Translates to: FCFRLTSGPERRGLF*LGFPEVGFTCHLGT Trigger: GGTGCCGAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAGGCAGAAAAGACCTCTGCGCTCAGGTCCGGATGTTAACCGGAAGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR CCA 90 bp | GGAGATCTCTGGGGCCCATCTGAGAGGAGTGAATCTGTCAGCTCCTaGCTGTCCTTCAGGGGAACGGAAGAAACCTGGAGAACAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: GDLWGPSERSESVSS*LSFRGTEETWRTGR Trigger: CCTTCCTGTTCTCCAGGTTTCTTCCGTTCCCCTGAAGGACAGCCAGGAGCTGACAGATTCACTCCTCTCAGATGGGCCCCAGAGATCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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3UTR GCA 90 bp | TGGGCTCGTAATCCACAGGAGTGGTACTCTCACAATCCTCCTTTCTaGTGTCCCTACCGAGAGACTTCTGGGACTGGTCCAAATGTGCCC | + |
Preference number: 1 (lower is better) Translates to: WARNPQEWYSHNPPF*CPYRETSGTGPNVP Trigger: GGGCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAAGGAGGATTGTGAGAGTACCACTCCTGTGGATTACGAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR GCA 90 bp | TCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTaGTATGTAAACCAGATGTTTGCCTGTCTCTCCCTCCCGAGGCAT | + |
Preference number: 1 (lower is better) Translates to: SHPGVSLCRSGWPGT*YVNQMFACLSLPRH Trigger: ATGCCTCGGGAGGGAGAGACAGGCAAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR CCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTaGCCTGGAACTTGCTATGTAAACCAGATGTTTGCCTGTCTCTCC | + |
Preference number: 1 (lower is better) Translates to: CLSVSHPGVSLCRSG*PGTCYVNQMFACLS Trigger: GGAGAGACAGGCAAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR CCA 90 bp | TTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTCTAAGTTGCCCTCCTTaGGCTCGTAATCCACAGGAG | + |
Preference number: 2 (lower is better) Translates to: FPCVLRPPSVGQLHRRPALSCPP*ARNPQE Trigger: CTCCTGTGGATTACGAGCCCAAGGAGGGCAACTTAG...AGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR-3UTR GCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGATCGGAGCACCTGGGATaGTCCAGTGTCCCTGAAGGC | + |
Preference number: 2 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGSEHLG*SSVPEG Trigger: GCCTTCAGGGACACTGGAGCATCCCAGGTGCTCCGA...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR GCA 90 bp | TTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTCACAATCCTCCTTTCTaGTGTCCCTACCGAGAGACT | + |
Preference number: 2 (lower is better) Translates to: FPCVLRPPSVGQLHRRPAHNPPF*CPYRET Trigger: AGTCTCTCGGTAGGGACAGCAGAAAGGAGGATTGTG...AGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR-3UTR TCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCAGGCTAAGCTCTACCTaGCAGGGCTTCCCCTCGTCT | + |
Preference number: 2 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCRLSST*QGFPSS Trigger: AGACGAGGGGAAGCCCTGTCAGGTAGAGCTTAGCCT...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR GCA 90 bp | GGACTCTGGACGCTGAACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGCTAACCAGATCCTCCTaGCTCAGCTTCCCAAGTAGC | + |
Preference number: 2 (lower is better) Translates to: GLWTLNTILFRAFCGHPVLTRSS*LSFPSS Trigger: GCTACTTGGGAAGCTGAGGCAGGAGGATCTGGTTAG...CACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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3UTR-3UTR CCA 90 bp | TCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTAGAGACTTCTGGGACTaGTCCAAATGTGCCCATTCC | + |
Preference number: 2 (lower is better) Translates to: SFPCVLRPPSVGQLHRRPRDFWD*SKCAHS Trigger: GGAATGGGCACATTTGGACCAGTCCCAGAAGTCTCT...AGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR-3UTR GCA 90 bp | CTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGGCACCATGTCCTTCAGGGGACTGGTCCAAATGTaGCCATTCCTCCAGGATGAA | + |
Preference number: 2 (lower is better) Translates to: LGFPEVGFTCHLGTMSFRGLVQM*PFLQDE Trigger: TTCATCCTGGAGGAATGGGCACATTTGGACCAGTCC...CCTGAAGGACATGGTGCCGAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR-3UTR CCA 90 bp | ACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAAGAGACTTCTGGGACTaGTCCAAATGTGCCCATTCC | + |
Preference number: 2 (lower is better) Translates to: TILFRAFCGHPVWVSCIGRDFWD*SKCAHS Trigger: GGAATGGGCACATTTGGACCAGTCCCAGAAGTCTCT...TCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR-3UTR CCA 90 bp | TTTCTGCCTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGGCACCATGTCCGTAATCCACAGGAGTaGTACTCTCACAATCCTCCT | + |
Preference number: 2 (lower is better) Translates to: FLPWIPRSGIHLPPRHHVRNPQE*YSHNPP Trigger: AGGAGGATTGTGAGAGTACCACTCCTGTGGATTACG...GACATGGTGCCGAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAGGCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR-3UTR TCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTATGCTGTTACACATATaGGAGCCATGGAAGGCTTCT | + |
Preference number: 2 (lower is better) Translates to: GAVVSRDVPRWASRGRVPMLLHI*EPWKAS Trigger: AGAAGCCTTCCATGGCTCTCATATGTGTAACAGCAT...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR TCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTAGGCTAAGCTCTACCTaGCAGGGCTTCCCCTCGTCT | + |
Preference number: 2 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSRLSST*QGFPSS Trigger: AGACGAGGGGAAGCCCTGTCAGGTAGAGCTTAGCCT...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR GCA 90 bp | CTGAAATGGGAGATCTCTGGGGCCCATCTGAGAGGAGTGAATCTGTCAGCTCCTGGACTGGTCCAAATGTaGCCATTCCTCCAGGATGAA | + |
Preference number: 2 (lower is better) Translates to: LKWEISGAHLRGVNLSAPGLVQM*PFLQDE Trigger: TTCATCCTGGAGGAATGGGCACATTTGGACCAGTCC...AGGAGCTGACAGATTCACTCCTCTCAGATGGGCCCCAGAGATCTCCCATTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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3UTR-3UTR CCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAGCTATGCTGTTGAGGTaGAAACTACAAATGAGCTTA | + |
Preference number: 2 (lower is better) Translates to: PVAGAVVSRDVPRWASRGAMLLR*KLQMSL Trigger: TAAGCTCATTTGTAGTTTCCACCTCAACAGCATAGC...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR TCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCAATGCTGTTACACATATaGGAGCCATGGAAGGCTTCT | + |
Preference number: 2 (lower is better) Translates to: STPVAGAVVSRDVPRWASMLLHI*EPWKAS Trigger: AGAAGCCTTCCATGGCTCTCATATGTGTAACAGCAT...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR GCA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATTCGGAGCACCTGGGATaGTCCAGTGTCCCTGAAGGC | + |
Preference number: 2 (lower is better) Translates to: EVETTNELMSTALMTLCYSEHLG*SSVPEG Trigger: GCCTTCAGGGACACTGGAGCATCCCAGGTGCTCCGA...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR-3UTR GCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGGCTGGCCTGGAACTTaGTATGTAAACCAGATGTTT | + |
Preference number: 2 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEGWPGT*YVNQMF Trigger: AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCC...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR GCA 72 bp | CGCCGGACTCTGGACGCTGAACACCATTCTTTTCCGTaGGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCAT | + |
Preference number: 3 (lower is better) Translates to: RRTLDAEHHSFP*VLRPPSVGQLH Trigger: ATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR TCA 72 bp | TCCTTCAGGTCGCTGACTTCGCCGGACTCTGGACGCTaGACACCATTCTTTTCCGTGCGTTCTGCGGCCACC | + |
Preference number: 3 (lower is better) Translates to: SFRSLTSPDSGR*TPFFSVRSAAT Trigger: GGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCCGGCGAAGTCAGCGACCTGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR TCA 72 bp | TCACCTGCCACCTCGGCACCATGTCCTTCAGGTCGCTaGCTTCGCCGGACTCTGGACGCTGAACACCATTCT | + |
Preference number: 3 (lower is better) Translates to: SPATSAPCPSGR*LRRTLDAEHHS Trigger: AGAATGGTGTTCAGCGTCCAGAGTCCGGCGAAGTCAGCGACCTGAAGGACATGGTGCCGAGGTGGCAGGTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR GCA 72 bp | CTCTGGACGCTGAACACCATTCTTTTCCGTGCGTTCTaGGGCCACCCAGTGTGGGTCAGCTGCATCGGAGAC | + |
Preference number: 3 (lower is better) Translates to: LWTLNTILFRAF*GHPVWVSCIGD Trigger: GTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR CCA 72 bp | ACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTaGGTCAGCTGCATCGGAGACCTGCTGCACCGTGAA | + |
Preference number: 3 (lower is better) Translates to: TILFRAFCGHPV*VSCIGDLLHRE Trigger: TTCACGGTGCAGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR CCA 72 bp | TGGGGCCCATCTGAGAGGAGTGAATCTGTCAGCTCCTaGCTGTCCTTCAGGGGAACGGAAGAAACCTGGAGA | + |
Preference number: 3 (lower is better) Translates to: WGPSERSESVSS*LSFRGTEETWR Trigger: TCTCCAGGTTTCTTCCGTTCCCCTGAAGGACAGCCAGGAGCTGACAGATTCACTCCTCTCAGATGGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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3UTR TCA 72 bp | GCCATTCGATTTCTGCTTCCGGTTAACATCCGGACCTaGGCGCAGAGGTCTTTTCTGCCTTGGATTCCCCGA | + |
Preference number: 3 (lower is better) Translates to: AIRFLLPVNIRT*AQRSFLPWIPR Trigger: TCGGGGAATCCAAGGCAGAAAAGACCTCTGCGCTCAGGTCCGGATGTTAACCGGAAGCAGAAATCGAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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3UTR CCA 72 bp | CAATCCTCCTTTCTGCTGTCCCTACCGAGAGACTTCTaGGACTGGTCCAAATGTGCCCATTCCTCCAGGATG | + |
Preference number: 3 (lower is better) Translates to: QSSFLLSLPRDF*DWSKCAHSSRM Trigger: CATCCTGGAGGAATGGGCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAAGGAGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR GCA 72 bp | AATCCACAGGAGTGGTACTCTCACAATCCTCCTTTCTaGTGTCCCTACCGAGAGACTTCTGGGACTGGTCCA | + |
Preference number: 3 (lower is better) Translates to: NPQEWYSHNPPF*CPYRETSGTGP Trigger: TGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAAGGAGGATTGTGAGAGTACCACTCCTGTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR CCA 72 bp | CTAAGTTGCCCTCCTTGGGCTCGTAATCCACAGGAGTaGTACTCTCACAATCCTCCTTTCTGCTGTCCCTAC | + |
Preference number: 3 (lower is better) Translates to: LSCPPWARNPQE*YSHNPPFCCPY Trigger: GTAGGGACAGCAGAAAGGAGGATTGTGAGAGTACCACTCCTGTGGATTACGAGCCCAAGGAGGGCAACTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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3UTR GCA 72 bp | GGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTaGTATGTAAACCAGATGTTTGCCTGTCTCTCCCTC | + |
Preference number: 3 (lower is better) Translates to: GVSLCRSGWPGT*YVNQMFACLSL Trigger: GAGGGAGAGACAGGCAAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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3UTR TCA 72 bp | CTGATGGTTAAGATGGCTAAGATGCTGTTACACATATaGGAGCCATGGAAGGCTTCTCTAAAGCCAGGCCGC | + |
Preference number: 3 (lower is better) Translates to: LMVKMAKMLLHI*EPWKASLKPGR Trigger: GCGGCCTGGCTTTAGAGAAGCCTTCCATGGCTCTCATATGTGTAACAGCATCTTAGCCATCTTAACCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTGCACCGTTTCCAGAAGATTCTGTaGCTCTCGCTCGGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: AFCGHPVWVSCIGDLLHRFQKIL*LSLGLG Trigger: GCCCAGCCCGAGCGAGAGTCACAGAATCTTCTGGAA...ACGGTGCAGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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CDS-3UTR TCA 90 bp | GGACTCTGGACGCTGAACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTCCCCACTCTCGGGGTaGTGCTCTCTCACCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: GLWTLNTILFRAFCGHPVSPLSG*CSLTQA Trigger: GGCCTGGGTGAGAGAGCATCACCCCGAGAGTGGGGA...CACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR GCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCGCGGACACTGGCAGGTaGTGTCCCTGCATGCGTCGC | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCADTGR*CPCMRR Trigger: GCGACGCATGCAGGGACAGCACCTGCCAGTGTCCGC...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GGACTCTGGACGCTGAACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTTCCAGAAGATTCTGTaGCTCTCGCTCGGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GLWTLNTILFRAFCGHPVFQKIL*LSLGLG Trigger: GCCCAGCCCGAGCGAGAGTCACAGAATCTTCTGGAA...CACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTTCAGCGTCCAGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161896.2 ENSMUST00000162168.8 |
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CDS-3UTR TCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTGGTGCGCGCTCTGGATaGAGCTTTTCCCGCACTCGT | + |
Preference number: 4 (lower is better) Translates to: GAVVSRDVPRWASRGRVPGARSG*SFSRTR Trigger: ACGAGTGCGGGAAAAGCTTCATCCAGAGCGCGCACC...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | TTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTACCACAACTGTTGTCTaGGCTCCTCCAGCTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: FPCVLRPPSVGQLHRRPATTTVV*APPALS Trigger: AGAGAGAGCTGGAGGAGCGCAGACAACAGTTGTGGT...AGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAGCTGCCTCATGGTACTaGAAGTGCTTGAAGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: PVAGAVVSRDVPRWASRGAASWY*KCLKRW Trigger: CCAGCGCTTCAAGCACTTCCAGTACCATGAGGCAGC...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | CACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGGCTGCCTCATGGTACTaGAAGTGCTTGAAGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: HHSFPCVLRPPSVGQLHRAASWY*KCLKRW Trigger: CCAGCGCTTCAAGCACTTCCAGTACCATGAGGCAGC...CCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR TCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGATCCCCACTCTCGGGGTaGTGCTCTCTCACCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGSPLSG*CSLTQA Trigger: GGCCTGGGTGAGAGAGCATCACCCCGAGAGTGGGGA...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTCCAGAAGATTCTGTaGCTCTCGCTCGGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GAVVSRDVPRWASRGRVPFQKIL*LSLGLG Trigger: GCCCAGCCCGAGCGAGAGTCACAGAATCTTCTGGAA...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGATCCTCCGGTGCTGAATaGAGTTTGAGGCTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: PVAGAVVSRDVPRWASRGSSGAE*SLRLGG Trigger: TCCTCCAAGCCTCAAACTTCATTCAGCACCGGAGGA...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTGGCCGGTTGTATCCCTaGATCCAGGAGCAGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: AGAVVSRDVPRWASRGRVGRLYP*IQEQSS Trigger: AGAGGACTGCTCCTGGATGCAGGGATACAACCGGCC...AACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGATTTATGTGCGGACACTaGCAGGTGCTGTCCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: PVAGAVVSRDVPRWASRGFMCGH*QVLSLH Trigger: ATGCAGGGACAGCACCTGCCAGTGTCCGCACATAAA...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCGGAGACCTGCTGCACCGTCTTCTACTTTCACTATaGGAAGGTCTGCTTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: AFCGHPVWVSCIGDLLHRLLLSL*EGLLAL Trigger: AAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAG...ACGGTGCAGCAGGTCTCCGATGCAGCTGACCCACACTGGGTGGCCGCAGAACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR TCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAGGTGGTACCATCTTCTaGGGAAGTACTTCGGGACTT | + |
Preference number: 4 (lower is better) Translates to: PVAGAVVSRDVPRWASRGGGTIF*GSTSGL Trigger: AAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACC...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCATTCCAGAAGATTCTGTaGCTCTCGCTCGGGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: STPVAGAVVSRDVPRWASFQKIL*LSLGLG Trigger: GCCCAGCCCGAGCGAGAGTCACAGAATCTTCTGGAA...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGACCGCTGTGCACGCTGTaGTGCTGCACCAGATGGGAG | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGPLCTL*CCTRWE Trigger: CTCCCATCTGGTGCAGCATCACAGCGTGCACAGCGG...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCATCACAGCCCTCACTGTaGCCTTCAGCCTGGCAAGCA | + |
Preference number: 4 (lower is better) Translates to: STPVAGAVVSRDVPRWASSQPSL*PSAWQA Trigger: TGCTTGCCAGGCTGAAGGTCACAGTGAGGGCTGTGA...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | CTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTTGGATTCTCCGATGCTaGATGAGGTGCGCGCTCTGG | + |
Preference number: 4 (lower is better) Translates to: LSLTQGSHYVDLAGLELAWILRC*MRCALW Trigger: CCAGAGCGCGCACCTCATTCAGCATCGGAGAATCCA...AGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR TCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGCCACACTCATTGCACTaGTGGGATTTCCCACTGGGG | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMPHSLH*WDFPLG Trigger: CCCCAGTGGGAAATCCCATCAGTGCAATGAGTGTGG...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCAGGCCGGTTGTATCCCTaGATCCAGGAGCAGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: STPVAGAVVSRDVPRWASGRLYP*IQEQSS Trigger: AGAGGACTGCTCCTGGATGCAGGGATACAACCGGCC...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | CCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAGGTACTGGAAGTGCTTaGAGCGCTGGTAAAAAGTCT | + |
Preference number: 4 (lower is better) Translates to: PVAGAVVSRDVPRWASRGGTGSA*SAGKKS Trigger: AGACTTTTTACCAGCGCTTCAAGCACTTCCAGTACC...TCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GGTCTTTTCTGCCTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGGCACCGGTGGTACCATCTTCTaGGGAAGTACTTCGGGACTT | + |
Preference number: 4 (lower is better) Translates to: GLFCLGFPEVGFTCHLGTGGTIF*GSTSGL Trigger: AAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACC...GGTGCCGAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAGGCAGAAAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR TCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGACGCGGTGATGTTGAGTaGGGTGGACACGTTGGTTGT | + |
Preference number: 4 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGRGDVE*GGHVGC Trigger: ACAACCAACGTGTCCACCTCACTCAACATCACCGCG...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCATGCACACTCTGGTGTTaGACGAGGTGGGACCTCACT | + |
Preference number: 4 (lower is better) Translates to: STPVAGAVVSRDVPRWASCTLWC*TRWDLT Trigger: AGTGAGGTCCCACCTCGTTCAACACCAGAGTGTGCA...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTGATGGGACTTCAGACTaGAGCCCCTTCCACACTCAT | + |
Preference number: 4 (lower is better) Translates to: GAVVSRDVPRWASRGRVPDGTSD*SPFHTH Trigger: ATGAGTGTGGAAGGGGCTTCAGTCTGAAGTCCCATC...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | CTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCGATGGGACTTCAGACTaGAGCCCCTTCCACACTCAT | + |
Preference number: 4 (lower is better) Translates to: LGQSCPEMYQDGLHAEEFDGTSD*SPFHTH Trigger: ATGAGTGTGGAAGGGGCTTCAGTCTGAAGTCCCATC...GAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | ATCCTCCTTTCTGCTGTCCCTACCGAGAGACTTCTGGGACTGGTCCAAATGTGCGGCCGGTTGTATCCCTaGATCCAGGAGCAGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: ILLSAVPTERLLGLVQMCGRLYP*IQEQSS Trigger: AGAGGACTGCTCCTGGATGCAGGGATACAACCGGCC...GCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAAGGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR GCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTGGCAATCTGTTGTCTaGGCTCCTCCAGCTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMWQSVV*APPALS Trigger: AGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCA...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGACTTTTCCGTGCGTTCTaGGGCCACCCAGTGTGGGTC | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGLFRAF*GHPVWV Trigger: GACCCACACTGGGTGGCCGCAGAACGCACGGAAAAG...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | CTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTGGTGCTGTCCCTGCATaGGTCGCATTTCTGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: LSLTQGSHYVDLAGLELAGAVPA*VAFLGF Trigger: AAACCCCAGAAATGCGACGCATGCAGGGACAGCACC...AGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GGTCTTTTCTGCCTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGGCACCTCCTCCAGCTCTCTCTaGATACTCTCTATCACAGCC | + |
Preference number: 4 (lower is better) Translates to: GLFCLGFPEVGFTCHLGTSSSSL*ILSITA Trigger: GGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGA...GGTGCCGAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAGGCAGAAAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCGTGTGGCCTCTCTCCTaGAGACGACTTCTTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCVWPLS*RRLLVD Trigger: GTCCACAAGAAGTCGTCTCCAGGAGAGAGGCCACAC...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGCTCGTTACATTGGTGTaGCCTCTCTCCTGGAGACGA | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMLVTLV*PLSWRR Trigger: TCGTCTCCAGGAGAGAGGCCACACCAATGTAACGAG...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTCTCTTCTGGCCCACATaGAGCACTTGGTGTTCAAGG | + |
Preference number: 4 (lower is better) Translates to: GAVVSRDVPRWASRGRVPLFWPT*STWCSR Trigger: CCTTGAACACCAAGTGCTCCATGTGGGCCAGAAGAG...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTCTTCTCGCTCTTCTaGCCCACATGGAGCACTTGG | + |
Preference number: 4 (lower is better) Translates to: GAVVSRDVPRWASRGRVPFFSLF*PTWSTW Trigger: CCAAGTGCTCCATGTGGGCCAGAAGAGCGAGAAGAA...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAGAATCTGTCAGCTCCTaGCTGTCCTTCAGGGGAACG | + |
Preference number: 4 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGESVSS*LSFRGT Trigger: CGTTCCCCTGAAGGACAGCCAGGAGCTGACAGATTC...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | CCGAGAGACTTCTGGGACTGGTCCAAATGTGCCCATTCCTCCAGGATGAAGGACGAATCTGTCAGCTCCTaGCTGTCCTTCAGGGGAACG | + |
Preference number: 4 (lower is better) Translates to: PRDFWDWSKCAHSSRMKDESVSS*LSFRGT Trigger: CGTTCCCCTGAAGGACAGCCAGGAGCTGACAGATTC...GTCCTTCATCCTGGAGGAATGGGCACATTTGGACCAGTCCCAGAAGTCTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CCA 90 bp | GCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCTACCGAGAGACTTCTaGGACTGGTCCAAATGTGCC | + |
Preference number: 4 (lower is better) Translates to: AGAVVSRDVPRWASRGRVLPRDF*DWSKCA Trigger: GGCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAG...AACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGATGGATCCTCCGGTGCTaGATGAAGTTTGAGGCTTGG | + |
Preference number: 4 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGWILRC*MKFEAW Trigger: CCAAGCCTCAAACTTCATTCAGCACCGGAGGATCCA...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTTGGATTCTCCGATGCTaGATGAGGTGCGCGCTCTGG | + |
Preference number: 4 (lower is better) Translates to: EVSVCLSVSHPGVSLCRSWILRC*MRCALW Trigger: CCAGAGCGCGCACCTCATTCAGCATCGGAGAATCCA...AGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | CTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCGGCTACAGCTCCAACTaGAACTCATTCCACACTCCT | + |
Preference number: 4 (lower is better) Translates to: LGQSCPEMYQDGLHAEEFGYSSN*NSFHTP Trigger: AGGAGTGTGGAATGAGTTTCAGTTGGAGCTGTAGCC...GAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCGGTCCTGCTGCCTCATaGTACTGGAAGTGCTTGAAG | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCGPAAS*YWKCLK Trigger: CTTCAAGCACTTCCAGTACCATGAGGCAGCAGGACC...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | TCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGTGTGGCCTCTCTCCTaGAGACGACTTCTTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: SFIHRTQRCLSVCLSLTQVWPLS*RRLLVD Trigger: GTCCACAAGAAGTCGTCTCCAGGAGAGAGGCCACAC...CTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCCTCGTTACATTGGTGTaGCCTCTCTCCTGGAGACGA | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCLVTLV*PLSWRR Trigger: TCGTCTCCAGGAGAGAGGCCACACCAATGTAACGAG...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | CGCAGAGGTCTTTTCTGCCTTGGATTCCCCGAAGTGGGATTCACCTGCCACCTCGTTTTCACCAACTTCTaGGGCCCATCTGAGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: RRGLFCLGFPEVGFTCHLVFTNF*GPSERS Trigger: ACTCCTCTCAGATGGGCCCCAGAAGTTGGTGAAAAC...GAGGTGGCAGGTGAATCCCACTTCGGGGAATCCAAGGCAGAAAAGACCTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGAGAGACTTCTGGGACTaGTCCAAATGTGCCCATTCC | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMRDFWD*SKCAHS Trigger: GGAATGGGCACATTTGGACCAGTCCCAGAAGTCTCT...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | AGTACTCCAGTGGCTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACTAAGTTGCCCTCCTTaGGCTCGTAATCCACAGGAG | + |
Preference number: 4 (lower is better) Translates to: STPVAGAVVSRDVPRWASLSCPP*ARNPQE Trigger: CTCCTGTGGATTACGAGCCCAAGGAGGGCAACTTAG...TGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAGCCACTGGAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCCCGCTGTGCACGCTGTaGTGCTGCACCAGATGGGAG | + |
Preference number: 4 (lower is better) Translates to: KQCHVKTFLYPQDPEVSVPLCTL*CCTRWE Trigger: CTCCCATCTGGTGCAGCATCACAGCGTGCACAGCGG...GACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCCTAGGGTTTCTTTCATaGCAACCCCCTGCTGTCCAT | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCLGFLS*QPPAVH Trigger: ATGGACAGCAGGGGGTTGTCATGAAAGAAACCCTAG...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCAATCGCGGGGTCCTGCTaGCTCATGGTACTGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: DFPLSTGPRGVCLSVCLSIAGSC*LMVLEV Trigger: CACTTCCAGTACCATGAGGCAGCAGGACCCCGCGAT...TGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCATCGATCAGATGCGAGTaGCGCCCAAAGCTCTTCCCG | + |
Preference number: 4 (lower is better) Translates to: DFPLSTGPRGVCLSVCLSSIRCE*RPKLFP Trigger: CGGGAAGAGCTTTGGGCGGCACTCGCATCTGATCGA...TGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | TCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGAAGTGGCGCTTCAGATaGTCGATCAGATGCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: SFIHRTQRCLSVCLSLTQKWRFR*SIRCEC Trigger: GCACTCGCATCTGATCGAGCATCTGAAGCGCCACTT...CTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR CCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTCCTCCAGCTCTCTCTaGATACTCTCTATCACAGCC | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCSSSSL*ILSITA Trigger: GGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGA...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR CCA 90 bp | TCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGCTCTTCTGGCCCACATaGAGCACTTGGTGTTCAAGG | + |
Preference number: 4 (lower is better) Translates to: SFIHRTQRCLSVCLSLTQLFWPT*STWCSR Trigger: CCTTGAACACCAAGTGCTCCATGTGGGCCAGAAGAG...CTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR TCA 90 bp | TCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGTGGTACCATCTTCTaGGGAAGTACTTCGGGACTT | + |
Preference number: 4 (lower is better) Translates to: SFIHRTQRCLSVCLSLTQGGTIF*GSTSGL Trigger: AAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACC...CTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR TCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTTCCAGGTCTGCTTCTaGAAGTCCTGGAATTTGCTT | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMFQVCF*KSWNLL Trigger: AAGCAAATTCCAGGACTTTCAGAAGCAGACCTGGAA...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR TCA 90 bp | GACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACGCGGTGATGTTGAGTaGGGTGGACACGTTGGTTGT | + |
Preference number: 4 (lower is better) Translates to: DFPLSTGPRGVCLSVCLSRGDVE*GGHVGC Trigger: ACAACCAACGTGTCCACCTCACTCAACATCACCGCG...TGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR GCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGATGGCAATCTGTTGTCTaGGCTCCTCCAGCTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGWQSVV*APPALS Trigger: AGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCA...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR GCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGCGGACACTGGCAGGTaGTGTCCCTGCATGCGTCGC | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEADTGR*CPCMRR Trigger: GCGACGCATGCAGGGACAGCACCTGCCAGTGTCCGC...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR GCA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAGGGCAGCTTTTCTGTTaGTGTTTTATGTGCGGACAC | + |
Preference number: 4 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGGQLFC*CFMCGH Trigger: GTGTCCGCACATAAAACAGCAACAGAAAAGCTGCCC...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR GCA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCGGGCAGCTTTTCTGTTaGTGTTTTATGTGCGGACAC | + |
Preference number: 4 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCGQLFC*CFMCGH Trigger: GTGTCCGCACATAAAACAGCAACAGAAAAGCTGCCC...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | CTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTCGTAATCCACAGGAGTaGTACTCTCACAATCCTCCT | + |
Preference number: 4 (lower is better) Translates to: LSLTQGSHYVDLAGLELARNPQE*YSHNPP Trigger: AGGAGGATTGTGAGAGTACCACTCCTGTGGATTACG...AGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
||
CDS-3UTR CCA 90 bp | TGTCAGCTCCTGGCTGTCCTTCAGGGGAACGGAAGAAACCTGGAGAACAGGAAGCCCTGCAGTATGGACTaGTCTATTGACAAGGCCATT | + |
Preference number: 4 (lower is better) Translates to: CQLLAVLQGNGRNLENRKPCSMD*SIDKAI Trigger: AATGGCCTTGTCAATAGACCAGTCCATACTGCAGGG...CTTCCTGTTCTCCAGGTTTCTTCCGTTCCCCTGAAGGACAGCCAGGAGCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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CDS-3UTR TCA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGCTTCTACTTTCACTATaGGAAGGTCTGCTTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMLLLSL*EGLLAL Trigger: AAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAG...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AACACCATTCTTTTCCGTGCGTTCTGCGGCCACCCAGTGTGGGTCAGCTGCATCTATGGACTGGTCTATTaGCAAGGCCATTTTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: NTILFRAFCGHPVWVSCIYGLVY*QGHFLP Trigger: TGGAAGAAAATGGCCTTGTCAATAGACCAGTCCATA...GATGCAGCTGACCCACACTGGGTGGCCGCAGAACGCACGGAAAAGAATGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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CDS-3UTR GCA 90 bp | GAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTTGTTGCTGTTTTATGTaGGGACACTGGCAGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: EVSVCLSVSHPGVSLCRSCCCFM*GHWQVL Trigger: CAGCACCTGCCAGTGTCCGCACATAAAACAGCAACA...AGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGAGTTTTCACCAACTTCTaGGGCCCATCTGAGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGVFTNF*GPSERS Trigger: ACTCCTCTCAGATGGGCCCCAGAAGTTGGTGAAAAC...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATTCCCCACTCTCGGGGTaGTGCTCTCTCACCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: EVETTNELMSTALMTLCYSPLSG*CSLTQA Trigger: GGCCTGGGTGAGAGAGCATCACCCCGAGAGTGGGGA...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR TCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTTCCTCCGGTGCTGAATaGAGTTTGAGGCTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSSSGAE*SLRLGG Trigger: TCCTCCAAGCCTCAAACTTCATTCAGCACCGGAGGA...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCTCGTGACACTGGTGTaGCTTGTCTCTAGAGTGGAG | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSLVTLV*LVSRVE Trigger: CTCCACTCTAGAGACAAGTCACACCAGTGTCACGAG...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTATCGCGGGGTCCTGCTaGCTCATGGTACTGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFIAGSC*LMVLEV Trigger: CACTTCCAGTACCATGAGGCAGCAGGACCCCGCGAT...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGCTTTTCCGTGCGTTCTaGGGCCACCCAGTGTGGGTC | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPELFRAF*GHPVWV Trigger: GACCCACACTGGGTGGCCGCAGAACGCACGGAAAAG...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCAGGATCTGTCCTCTCGTaGCTACGCAGATGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: DFPLSTGPRGVCLSVCLSGSVLS*LRRCLK Trigger: CTTCAAACATCTGCGTAGCCACGAGAGGACAGATCC...TGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCTAGGGTTTCTTTCATaGCAACCCCCTGCTGTCCAT | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSLGFLS*QPPAVH Trigger: ATGGACAGCAGGGGGTTGTCATGAAAGAAACCCTAG...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTGGACTGGTCCAAATGTaGCCATTCCTCCAGGATGAA | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSGLVQM*PFLQDE Trigger: TTCATCCTGGAGGAATGGGCACATTTGGACCAGTCC...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGCCCTGCTGTCCATCCTaGTGTTCACAGCCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEPCCPS*CSQPSL Trigger: CAGTGAGGGCTGTGAACACCAGGATGGACAGCAGGG...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | AAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTTCTTCTCGCTCTTCTaGCCCACATGGAGCACTTGG | + |
Preference number: 4 (lower is better) Translates to: KQCHVKTFLYPQDPEVSVFFSLF*PTWSTW Trigger: CCAAGTGCTCCATGTGGGCCAGAAGAGCGAGAAGAA...GACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTGGATCTGTCCTCTCGTaGCTACGCAGATGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSGSVLS*LRRCLK Trigger: CTTCAAACATCTGCGTAGCCACGAGAGGACAGATCC...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGACTTCTACTTTCACTATaGGAAGGTCTGCTTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGLLLSL*EGLLAL Trigger: AAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAG...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGTGCACACTCTGGTGTTaGACGAGGTGGGACCTCACT | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPECTLWC*TRWDLT Trigger: AGTGAGGTCCCACCTCGTTCAACACCAGAGTGTGCA...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTCTCGTGACACTGGTGTaGCTTGTCTCTAGAGTGGAG | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFLVTLV*LVSRVE Trigger: CTCCACTCTAGAGACAAGTCACACCAGTGTCACGAG...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AGCTATGCTGTTGAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGCCACACTCATTGCACTaGTGGGATTTCCCACTGGGG | + |
Preference number: 4 (lower is better) Translates to: SYAVEVETTNELMSTALMPHSLH*WDFPLG Trigger: CCCCAGTGGGAAATCCCATCAGTGCAATGAGTGTGG...CATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTCAACAGCATAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTAAGTGGCGCTTCAGATaGTCGATCAGATGCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFKWRFR*SIRCEC Trigger: GCACTCGCATCTGATCGAGCATCTGAAGCGCCACTT...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGCTGCCTCATGGTACTaGAAGTGCTTGAAGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEAASWY*KCLKRW Trigger: CCAGCGCTTCAAGCACTTCCAGTACCATGAGGCAGC...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTGGTCCTGCTGCCTCATaGTACTGGAAGTGCTTGAAG | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFGPAAS*YWKCLK Trigger: CTTCAAGCACTTCCAGTACCATGAGGCAGCAGGACC...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTTTTATGTGCGGACACTaGCAGGTGCTGTCCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFFMCGH*QVLSLH Trigger: ATGCAGGGACAGCACCTGCCAGTGTCCGCACATAAA...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCAGTGCTGAATGAAGTTTaGGGCTTGGAGGAAAAACTT | + |
Preference number: 4 (lower is better) Translates to: DFPLSTGPRGVCLSVCLSVLNEV*GLEEKL Trigger: AAGTTTTTCCTCCAAGCCTCAAACTTCATTCAGCAC...TGAGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | GTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTATGTAAACCAGATGTTTTGTTGCTGTTTTATGTaGGGACACTGGCAGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: VSLCRSGWPGTCYVNQMFCCCFM*GHWQVL Trigger: CAGCACCTGCCAGTGTCCGCACATAAAACAGCAACA...AAACATCTGGTTTACATAGCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | AAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCCTGTCGCTGCATCTTTaGGATTTCTCTCTGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: KQCHVKTFLYPQDPEVSVLSLHL*DFSLKW Trigger: CCACTTCAGAGAGAAATCCCAAAGATGCAGCGACAG...GACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR GCA 90 bp | AGCTATGCTGTTGAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGCACAATCCTCCTTTCTaGTGTCCCTACCGAGAGACT | + |
Preference number: 4 (lower is better) Translates to: SYAVEVETTNELMSTALMHNPPF*CPYRET Trigger: AGTCTCTCGGTAGGGACAGCAGAAAGGAGGATTGTG...CATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTCAACAGCATAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGTCCTCCAGCTCTCTCTaGATACTCTCTATCACAGCC | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPESSSSL*ILSITA Trigger: GGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGA...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
||
CDS-3UTR CCA 90 bp | AAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCTAAGTTGCCCTCCTTaGGCTCGTAATCATTTTCTT | + |
Preference number: 4 (lower is better) Translates to: KTFLYPQDPEVSVCLSVSLSCPP*ARNHFL Trigger: AAGAAAATGATTACGAGCCCAAGGAGGGCAACTTAG...AGAGACAGACAGACAGACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031601.8 |
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CDS-3UTR TCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGGTACTGGAAGTGCTTaGAGCGCTGGTAAAAAGTCT | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEGTGSA*SAGKKS Trigger: AGACTTTTTACCAGCGCTTCAAGCACTTCCAGTACC...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | AAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGGTGTCTGTCGTGCTGAATGAAGTTTaGGGCTTGGAGGAAAAACTT | + |
Preference number: 4 (lower is better) Translates to: KQCHVKTFLYPQDPEVSVVLNEV*GLEEKL Trigger: AAGTTTTTCCTCCAAGCCTCAAACTTCATTCAGCAC...GACAGACACCTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATTGGATCCTCCGGTGCTaGATGAAGTTTGAGGCTTGG | + |
Preference number: 4 (lower is better) Translates to: EVETTNELMSTALMTLCYWILRC*MKFEAW Trigger: CCAAGCCTCAAACTTCATTCAGCACCGGAGGATCCA...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR TCA 90 bp | GCTTCAAATAAACAATGCCATGTCAAGACTTTCCTTTATCCACAGGACCCAGAGTTCCAGGTCTGCTTCTaGAAGTCCTGGAATTTGCTT | + |
Preference number: 4 (lower is better) Translates to: ASNKQCHVKTFLYPQDPEFQVCF*KSWNLL Trigger: AAGCAAATTCCAGGACTTTCAGAAGCAGACCTGGAA...CTCTGGGTCCTGTGGATAAAGGAAAGTCTTGACATGGCATTGTTTATTTGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CCA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATCTGTCGCTGCATCTTTaGGATTTCTCTCTGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: EVETTNELMSTALMTLCYLSLHL*DFSLKW Trigger: CCACTTCAGAGAGAAATCCCAAAGATGCAGCGACAG...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 90 bp | GTGACTCTCGCTCGGGCTGGGCCTCCACAGGTAGACACTGGTGACTaGAGGACTCCTGCGTGGCTCCGGGTGGTACCATCTTCTGAGGAA | + |
Preference number: 5 (lower is better) Translates to: VTLARAGPPQVDTGD*RTPAWLRVVPSSEE Trigger: TTCCTCAGAAGATGGTACCACCCGGAGCCACGCAGGAGTCCTTCAGTCACCAGTGTCTACCTGTGGAGGCCCAGCCCGAGCGAGAGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS TCA 90 bp | GCTGACGTACTGGAAAAAGATCTCACCACACTCGTGACACTGGTGTaGCTTGTCTCTAGAGTGGAGTCGGAGGTGCCCGGCGAGATGCGA | + |
Preference number: 5 (lower is better) Translates to: ADVLEKDLTTLVTLV*LVSRVESEVPGEMR Trigger: TCGCATCTCGCCGGGCACCTCCGACTCCACTCTAGAGACAAGTCACACCAGTGTCACGAGTGTGGTGAGATCTTTTTCCAGTACGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 90 bp | ACCAACTTCTGGGGCCCATCTGAGAGGAGTGAATCTGTCAGCTCCTaGCTGTCCTTCAGGGGAACGGAAGAAACCTGGAGAACAGGAAGG | + |
Preference number: 5 (lower is better) Translates to: TNFWGPSERSESVSS*LSFRGTEETWRTGR Trigger: CCTTCCTGTTCTCCAGGTTTCTTCCGTTCCCCTGAAGGACAGCCAGGAGCTGACAGATTCACTCCTCTCAGATGGGCCCCAGAAGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085671.10 ENSMUST00000161881.2 ENSMUST00000161896.2 |
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CDS TCA 90 bp | ATGACAACCCCCTGCTGTCCATCCTGGTGTTCACAGCCCTCACTGTaGCCTTCAGCCTGGCAAGCATTCCTTTGGACTTCTCCCGATAGT | + |
Preference number: 5 (lower is better) Translates to: MTTPCCPSWCSQPSL*PSAWQAFLWTSPDS Trigger: ACTATCGGGAGAAGTCCAAAGGAATGCTTGCCAGGCTGAAGGTCACAGTGAGGGCTGTGAACACCAGGATGGACAGCAGGGGGTTGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 90 bp | TGGCTCCGGGTGGTACCATCTTCTGAGGAAGTACTTCGGGACTTGTaGCAATCTGTTGTCTGCGCTCCTCCAGCTCTCTCTGGATACTCT | + |
Preference number: 5 (lower is better) Translates to: WLRVVPSSEEVLRDL*QSVVCAPPALSGYS Trigger: AGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTATGAGAAGGTCTGCTaGCTCTTGCGAAGTCTCAGC | + |
Preference number: 5 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMYEKVC*LLRSLS Trigger: GCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATA...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GGACCCAGAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGGAAGTACTTCGGGACTaGTGGCAATCTGTTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: GPRGVCLSVCLSPRGLTMEVLRD*WQSVVC Trigger: GCAGACAACAGATTGCCACAAGTCCCGAAGTACTTC...CATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTCTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAAGTGAGGTGGACACGTaGGTTGTAGCTCTTCCCACA | + |
Preference number: 5 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGSEVDT*VVALPT Trigger: TGTGGGAAGAGCTACAACCAACGTGTCCACCTCACT...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGTGCACACTCTGGTGTaGAACGAGGTGGGACCTCAC | + |
Preference number: 5 (lower is better) Translates to: EVSVCLSVSHPGVSLCRSVHTLV*NEVGPH Trigger: GTGAGGTCCCACCTCGTTCAACACCAGAGTGTGCAC...AGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 90 bp | TGTTCAAGGAGGCTGACGTACTGGAAAAAGATCTCACCACACTCGTaGCACTGGTGTGACTTGTCTCTAGAGTGGAGTCGGAGGTGCCCG | + |
Preference number: 5 (lower is better) Translates to: CSRRLTYWKKISPHS*HWCDLSLEWSRRCP Trigger: CGGGCACCTCCGACTCCACTCTAGAGACAAGTCACACCAGTGTCACGAGTGTGGTGAGATCTTTTTCCAGTACGTCAGCCTCCTTGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 90 bp | AGTCGCACTGGTAAGGCTGCTCCTGTAACTCCAGCTTCTTATCTTTaGTCACCGTCAGGTTCCAGCTGTAGGCCTCCTCGCAGATACCGT | + |
Preference number: 5 (lower is better) Translates to: SRTGKAAPVTPASYL*SPSGSSCRPPRRYR Trigger: ACGGTATCTGCGAGGAGGCCTACAGCTGGAACCTGACGGTGATCAAAGATAAGAAGCTGGAGTTACAGGAGCAGCCTTACCAGTGCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 90 bp | CCATCTTCTGAGGAAGTACTTCGGGACTTGTGGCAATCTGTTGTCTaGGCTCCTCCAGCTCTCTCTGGATACTCTCTATCACAGCCACGG | + |
Preference number: 5 (lower is better) Translates to: PSSEEVLRDLWQSVV*APPALSGYSLSQPR Trigger: CCGTGGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 90 bp | TGGCTCCGGGTGGTACCATCTTCTGAGGAAGTACTTCGGGACTTGTaGCAATCTAACAACCACAACTGTTGTCTGCGCTCCTCCAGCTCT | + |
Preference number: 5 (lower is better) Translates to: WLRVVPSSEEVLRDL*QSNNHNCCLRSSSS Trigger: AGAGCTGGAGGAGCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CAA 90 bp | CTGGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCTCTGTCGCTGCATCTTaGGGATTTCTCTCTGAAGTG | + |
Preference number: 5 (lower is better) Translates to: LGQSCPEMYQDGLHAEEFSVAAS*GFLSEV Trigger: CACTTCAGAGAGAAATCCCAAAGATGCAGCGACAGA...GAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GGGGCAGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTCCAGCTTCTTATCTTaGATCACCGTCAGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: GAVVSRDVPRWASRGRVPSSFLS*ITVRFQ Trigger: CTGGAACCTGACGGTGATCAAAGATAAGAAGCTGGA...AGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | TCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGAACTTGCTGGCTACGCAGATGTTaGAAGAGGCTACAGCTCCAA | + |
Preference number: 5 (lower is better) Translates to: SVSHPGVSLCRSGWPGTCWLRRC*KRLQLQ Trigger: TTGGAGCTGTAGCCTCTTCAAACATCTGCGTAGCCA...GCAAGTTCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | CAGCTCCTGGCTGTCCTTCAGGGGAACGGAAGAAACCTGGAGAACAGGAAGGGCGTATGGACTGGTCTATaGACAAGGCCATTTTCTTCC | + |
Preference number: 5 (lower is better) Translates to: QLLAVLQGNGRNLENRKGVWTGL*TRPFSS Trigger: GGAAGAAAATGGCCTTGTCAATAGACCAGTCCATAC...GCCCTTCCTGTTCTCCAGGTTTCTTCCGTTCCCCTGAAGGACAGCCAGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |
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CDS TCA 90 bp | ATTGGTGTGGCCTCTCTCCTGGAGACGACTTCTTGTGGACATAGCTaGACTCATTGCAGTCTGTCCTCTTTGAAGAGGACTGCCCTAGGG | + |
Preference number: 5 (lower is better) Translates to: IGVASLLETTSCGHS*THCSLSSLKRTALG Trigger: CCCTAGGGCAGTCCTCTTCAAAGAGGACAGACTGCAATGAGTTCAGCTATGTCCACAAGAAGTCGTCTCCAGGAGAGAGGCCACACCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | ATCCTCCTTTCTGCTGTCCCTACCGAGAGACTTCTGGGACTGGTCCAAATGTGCTATGAGAAGGTCTGCTaGCTCTTGCGAAGTCTCAGC | + |
Preference number: 5 (lower is better) Translates to: ILLSAVPTERLLGLVQMCYEKVC*LLRSLS Trigger: GCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATA...GCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAAGGAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS-3UTR CAA 90 bp | TGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTGGCTGGCCTGGATCTGTCGCTGCATCTTaGGGATTTCTCTCTGAAGTG | + |
Preference number: 5 (lower is better) Translates to: CLSVSHPGVSLCRSGWPGSVAAS*GFLSEV Trigger: CACTTCAGAGAGAAATCCCAAAGATGCAGCGACAGA...TCCAGGCCAGCCAGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 90 bp | TGTATCCCTGCATCCAGGAGCAGTCCTCTTCTTCTACTTTCACTATaGGAAGGTCTGCTTGCTCTTGCGAAGTCTCAGCGGGAGGCTCTA | + |
Preference number: 5 (lower is better) Translates to: CIPASRSSPLLLLSL*EGLLALAKSQREAL Trigger: TAGAGCCTCCCGCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAGAAGAGGACTGCTCCTGGATGCAGGGATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS GCA 90 bp | AAGTACTTCGGGACTTGTGGCAATCTAACAACCACAACTGTTGTCTaGGCTCCTCCAGCTCTCTCTGGATACTCTCTATCACAGCCACGG | + |
Preference number: 5 (lower is better) Translates to: KYFGTCGNLTTTTVV*APPALSGYSLSQPR Trigger: CCGTGGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCCGAAGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS CCA 90 bp | ATGGTACTGGAAGTGCTTGAAGCGCTGGTAAAAAGTCTCAAGCACTaGCCGGTTGTATCCCTGCATCCAGGAGCAGTCCTCTTCTTCTAC | + |
Preference number: 5 (lower is better) Translates to: MVLEVLEALVKSLKH*PVVSLHPGAVLFFY Trigger: GTAGAAGAAGAGGACTGCTCCTGGATGCAGGGATACAACCGGCCAGTGCTTGAGACTTTTTACCAGCGCTTCAAGCACTTCCAGTACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS CCA 90 bp | AAGTTTGAGGCTTGGAGGAAAAACTTCCCGCAGTCACCACATCTGTaGCCTCGTTCGCCATTCGATTTCTGCTTCCGGTTAACATCCGGA | + |
Preference number: 5 (lower is better) Translates to: KFEAWRKNFPQSPHL*PRSPFDFCFRLTSG Trigger: TCCGGATGTTAACCGGAAGCAGAAATCGAATGGCGAACGAGGCCACAGATGTGGTGACTGCGGGAAGTTTTTCCTCCAAGCCTCAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGATATGAGAAGGTCTGCTaGCTCTTGCGAAGTCTCAGC | + |
Preference number: 5 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGYEKVC*LLRSLS Trigger: GCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATA...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | AGTCGTGTCCAGAGATGTACCAAGATGGGCTTCACGCGGAAGAGTTCCTTTGGAGAAGTACTTCGGGACTaGTGGCAATCTGTTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: SRVQRCTKMGFTRKSSFGEVLRD*WQSVVC Trigger: GCAGACAACAGATTGCCACAAGTCCCGAAGTACTTC...TCCAAAGGAACTCTTCCGCGTGAAGCCCATCTTGGTACATCTCTGGACACGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 90 bp | CAGGAGCAGTCCTCTTCTTCTACTTTCACTATGAGAAGGTCTGCTTaGTCTTGCGAAGTCTCAGCGGGAGGCTCTAAGTGTATAACTGCC | + |
Preference number: 5 (lower is better) Translates to: QEQSSSSTFTMRRSA*SCEVSAGGSKCITA Trigger: GGCAGTTATACACTTAGAGCCTCCCGCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAGAAGAGGACTGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS-3UTR CAA 90 bp | GAGGTGTCTGTCTGTCTGTCTGTCTCTCACCCAGGGGTCTCACTATGTAGATCTTCCAGCTTCTTATCTTaGATCACCGTCAGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: EVSVCLSVSHPGVSLCRSSSFLS*ITVRFQ Trigger: CTGGAACCTGACGGTGATCAAAGATAAGAAGCTGGA...AGATCTACATAGTGAGACCCCTGGGTGAGAGACAGACAGACAGACAGACACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 90 bp | CAGTCCTCTTCTTCTACTTTCACTATGAGAAGGTCTGCTTGCTCTTaGGAAGTCTCAGCGGGAGGCTCTAAGTGTATAACTGCCCTGGAT | + |
Preference number: 5 (lower is better) Translates to: QSSSSTFTMRRSACS*EVSAGGSKCITALD Trigger: ATCCAGGGCAGTTATACACTTAGAGCCTCCCGCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAGAAGAGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS-3UTR CAA 90 bp | AGCTATGCTGTTGAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGAGTGAGGTGGACACGTaGGTTGTAGCTCTTCCCACA | + |
Preference number: 5 (lower is better) Translates to: SYAVEVETTNELMSTALMSEVDT*VVALPT Trigger: TGTGGGAAGAGCTACAACCAACGTGTCCACCTCACT...CATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTCAACAGCATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATGTGCACACTCTGGTGTaGAACGAGGTGGGACCTCAC | + |
Preference number: 5 (lower is better) Translates to: EVETTNELMSTALMTLCYVHTLV*NEVGPH Trigger: GTGAGGTCCCACCTCGTTCAACACCAGAGTGTGCAC...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS-3UTR CAA 90 bp | GAGGTGGAAACTACAAATGAGCTTATGTCTACTGCACTCATGACTCTTTGTTATTGGCTACGCAGATGTTaGAAGAGGCTACAGCTCCAA | + |
Preference number: 5 (lower is better) Translates to: EVETTNELMSTALMTLCYWLRRC*KRLQLQ Trigger: TTGGAGCTGTAGCCTCTTCAAACATCTGCGTAGCCA...ATAACAAAGAGTCATGAGTGCAGTAGACATAAGCTCATTTGTAGTTTCCACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 90 bp | ACTTCTCCCGATAGTTCCAGGTCTGCTTCTGAAAGTCCTGGAATTTaGTTAATGTTTAGTTTAGTGTTCTTACTTCTTCTGTCGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: TSPDSSRSASESPGI*LMFSLVFLLLLSLH Trigger: ATGCAGCGACAGAAGAAGTAAGAACACTAAACTAAACATTAAGCAAATTCCAGGACTTTCAGAAGCAGACCTGGAACTATCGGGAGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 72 bp | GCTCGGGCTGGGCCTCCACAGGTAGACACTGGTGACTaGAGGACTCCTGCGTGGCTCCGGGTGGTACCATCT | + |
Preference number: 6 (lower is better) Translates to: ARAGPPQVDTGD*RTPAWLRVVPS Trigger: AGATGGTACCACCCGGAGCCACGCAGGAGTCCTTCAGTCACCAGTGTCTACCTGTGGAGGCCCAGCCCGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 ENSMUST00000162168.8 |
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CDS GCA 72 bp | CACTGGTGTGACTTGTCTCTAGAGTGGAGTCGGAGGTaGCCGGCGAGATGCGAACGCCTCCCGAAGCCCTTC | + |
Preference number: 6 (lower is better) Translates to: HWCDLSLEWSRR*PARCERLPKPF Trigger: GAAGGGCTTCGGGAGGCGTTCGCATCTCGCCGGGCACCTCCGACTCCACTCTAGAGACAAGTCACACCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 72 bp | CGCGGGGTCCTGCTGCCTCATGGTACTGGAAGTGCTTaGAGCGCTGGTAAAAAGTCTCAAGCACTGGCCGGT | + |
Preference number: 6 (lower is better) Translates to: RGVLLPHGTGSA*SAGKKSQALAG Trigger: ACCGGCCAGTGCTTGAGACTTTTTACCAGCGCTTCAAGCACTTCCAGTACCATGAGGCAGCAGGACCCCGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS CAA 90 bp | GCGTGGCTCCGGGTGGTACCATCTTCTGAGGAAGTACTTCGGGACTaGTGGCAATCTGTTGTCTGCGCTCCTCCAGCTCTCTCTGGATAC | + |
Preference number: 6 (lower is better) Translates to: AWLRVVPSSEEVLRD*WQSVVCAPPALSGY Trigger: GTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCGGAGCCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CAA 90 bp | GCGTGGCTCCGGGTGGTACCATCTTCTGAGGAAGTACTTCGGGACTaGTGGCAATCTAACAACCACAACTGTTGTCTGCGCTCCTCCAGC | + |
Preference number: 6 (lower is better) Translates to: AWLRVVPSSEEVLRD*WQSNNHNCCLRSSS Trigger: GCTGGAGGAGCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCGGAGCCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS TCA 72 bp | CCCTGCTGTCCATCCTGGTGTTCACAGCCCTCACTGTaGCCTTCAGCCTGGCAAGCATTCCTTTGGACTTCT | + |
Preference number: 6 (lower is better) Translates to: PCCPSWCSQPSL*PSAWQAFLWTS Trigger: AGAAGTCCAAAGGAATGCTTGCCAGGCTGAAGGTCACAGTGAGGGCTGTGAACACCAGGATGGACAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | TTTTATGTGCGGACACTGGCAGGTGCTGTCCCTGCATaGGTCGCATTTCTGGGGTTTCTCCGCAGAGTGAGT | + |
Preference number: 6 (lower is better) Translates to: FYVRTLAGAVPA*VAFLGFLRRVS Trigger: ACTCACTCTGCGGAGAAACCCCAGAAATGCGACGCATGCAGGGACAGCACCTGCCAGTGTCCGCACATAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | GTGGCAATCTGTTGTCTGCGCTCCTCCAGCTCTCTCTaGATACTCTCTATCACAGCCACGGCTTCTTCCCCA | + |
Preference number: 6 (lower is better) Translates to: VAICCLRSSSSL*ILSITATASSP Trigger: TGGGGAAGAAGCCGTGGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | TCGCAGATACCGTTCTTCTCGCTCTTCTGGCCCACATaGAGCACTTGGTGTTCAAGGAGGCTGACGTACTGG | + |
Preference number: 6 (lower is better) Translates to: SQIPFFSLFWPT*STWCSRRLTYW Trigger: CCAGTACGTCAGCCTCCTTGAACACCAAGTGCTCCATGTGGGCCAGAAGAGCGAGAAGAACGGTATCTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | GGGCAGCTTTTCTGTTGCTGTTTTATGTGCGGACACTaGCAGGTGCTGTCCCTGCATGCGTCGCATTTCTGG | + |
Preference number: 6 (lower is better) Translates to: GQLFCCCFMCGH*QVLSLHASHFW Trigger: CCAGAAATGCGACGCATGCAGGGACAGCACCTGCCAGTGTCCGCACATAAAACAGCAACAGAAAAGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 72 bp | AAGGACTCCTGCGTGGCTCCGGGTGGTACCATCTTCTaGGGAAGTACTTCGGGACTTGTGGCAATCTGTTGT | + |
Preference number: 6 (lower is better) Translates to: KDSCVAPGGTIF*GSTSGLVAICC Trigger: ACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCGGAGCCACGCAGGAGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 72 bp | GGTAAGGCTGCTCCTGTAACTCCAGCTTCTTATCTTTaGTCACCGTCAGGTTCCAGCTGTAGGCCTCCTCGC | + |
Preference number: 6 (lower is better) Translates to: GKAAPVTPASYL*SPSGSSCRPPR Trigger: GCGAGGAGGCCTACAGCTGGAACCTGACGGTGATCAAAGATAAGAAGCTGGAGTTACAGGAGCAGCCTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | GAAGTGCTTGAAGCGCTGGTAAAAAGTCTCAAGCACTaGCCGGTTGTATCCCTGCATCCAGGAGCAGTCCTC | + |
Preference number: 6 (lower is better) Translates to: EVLEALVKSLKH*PVVSLHPGAVL Trigger: GAGGACTGCTCCTGGATGCAGGGATACAACCGGCCAGTGCTTGAGACTTTTTACCAGCGCTTCAAGCACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS CCA 72 bp | AACCACAACTGTTGTCTGCGCTCCTCCAGCTCTCTCTaGATACTCTCTATCACAGCCACGGCTTCTTCCCCA | + |
Preference number: 6 (lower is better) Translates to: NHNCCLRSSSSL*ILSITATASSP Trigger: TGGGGAAGAAGCCGTGGCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGTTGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS TCA 72 bp | TCCTCTTTGAAGAGGACTGCCCTAGGGTTTCTTTCATaGCAACCCCCTGCTGTCCATCCTGGTGTTCACAGC | + |
Preference number: 6 (lower is better) Translates to: SSLKRTALGFLS*QPPAVHPGVHS Trigger: GCTGTGAACACCAGGATGGACAGCAGGGGGTTGTCATGAAAGAAACCCTAGGGCAGTCCTCTTCAAAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | CATCTTTGGGATTTCTCTCTGAAGTGGCGCTTCAGATaGTCGATCAGATGCGAGTGCCGCCCAAAGCTCTTC | + |
Preference number: 6 (lower is better) Translates to: HLWDFSLKWRFR*SIRCECRPKLF Trigger: GAAGAGCTTTGGGCGGCACTCGCATCTGATCGAGCATCTGAAGCGCCACTTCAGAGAGAAATCCCAAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | GCTTGGAGGAAAAACTTCCCGCAGTCACCACATCTGTaGCCTCGTTCGCCATTCGATTTCTGCTTCCGGTTA | + |
Preference number: 6 (lower is better) Translates to: AWRKNFPQSPHL*PRSPFDFCFRL Trigger: TAACCGGAAGCAGAAATCGAATGGCGAACGAGGCCACAGATGTGGTGACTGCGGGAAGTTTTTCCTCCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CCA 72 bp | CCGTTCTTCTCGCTCTTCTGGCCCACATGGAGCACTTaGTGTTCAAGGAGGCTGACGTACTGGAAAAAGATC | + |
Preference number: 6 (lower is better) Translates to: PFFSLFWPTWST*CSRRLTYWKKI Trigger: GATCTTTTTCCAGTACGTCAGCCTCCTTGAACACCAAGTGCTCCATGTGGGCCAGAAGAGCGAGAAGAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CAA 72 bp | CTTCTGAGGAAGTACTTCGGGACTTGTGGCAATCTGTaGTCTGCGCTCCTCCAGCTCTCTCTGGATACTCTC | + |
Preference number: 6 (lower is better) Translates to: LLRKYFGTCGNL*SALLQLSLDTL Trigger: GAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CAA 90 bp | TGGTACCATCTTCTGAGGAAGTACTTCGGGACTTGTGGCAATCTGTaGTCTGCGCTCCTCCAGCTCTCTCTGGATACTCTCTATCACAGC | + |
Preference number: 6 (lower is better) Translates to: WYHLLRKYFGTCGNL*SALLQLSLDTLYHS Trigger: GCTGTGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS TCA 72 bp | GCATCCAGGAGCAGTCCTCTTCTTCTACTTTCACTATaGGAAGGTCTGCTTGCTCTTGCGAAGTCTCAGCGG | + |
Preference number: 6 (lower is better) Translates to: ASRSSPLLLLSL*EGLLALAKSQR Trigger: CCGCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAGAAGAGGACTGCTCCTGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS TCA 72 bp | AGGCTGACGTACTGGAAAAAGATCTCACCACACTCGTaGCACTGGTGTGACTTGTCTCTAGAGTGGAGTCGG | + |
Preference number: 6 (lower is better) Translates to: RLTYWKKISPHS*HWCDLSLEWSR Trigger: CCGACTCCACTCTAGAGACAAGTCACACCAGTGTCACGAGTGTGGTGAGATCTTTTTCCAGTACGTCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | GAGGAAGTACTTCGGGACTTGTGGCAATCTGTTGTCTaGGCTCCTCCAGCTCTCTCTGGATACTCTCTATCA | + |
Preference number: 6 (lower is better) Translates to: EEVLRDLWQSVV*APPALSGYSLS Trigger: TGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGATTGCCACAAGTCCCGAAGTACTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CAA 72 bp | ACCGTTCTTCTCGCTCTTCTGGCCCACATGGAGCACTaGGTGTTCAAGGAGGCTGACGTACTGGAAAAAGAT | + |
Preference number: 6 (lower is better) Translates to: TVLLALLAHMEH*VFKEADVLEKD Trigger: ATCTTTTTCCAGTACGTCAGCCTCCTTGAACACCAAGTGCTCCATGTGGGCCAGAAGAGCGAGAAGAACGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS CAA 72 bp | CGGGTGGTACCATCTTCTGAGGAAGTACTTCGGGACTaGTGGCAATCTAACAACCACAACTGTTGTCTGCGC | + |
Preference number: 6 (lower is better) Translates to: RVVPSSEEVLRD*WQSNNHNCCLR Trigger: GCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS TCA 72 bp | GCCTCTCTCCTGGAGACGACTTCTTGTGGACATAGCTaGACTCATTGCAGTCTGTCCTCTTTGAAGAGGACT | + |
Preference number: 6 (lower is better) Translates to: ASLLETTSCGHS*THCSLSSLKRT Trigger: AGTCCTCTTCAAAGAGGACAGACTGCAATGAGTTCAGCTATGTCCACAAGAAGTCGTCTCCAGGAGAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | CTGAACTCATTGCAGTCTGTCCTCTTTGAAGAGGACTaGCCTAGGGTTTCTTTCATGACAACCCCCTGCTGT | + |
Preference number: 6 (lower is better) Translates to: LNSLQSVLFEED*PRVSFMTTPCC Trigger: ACAGCAGGGGGTTGTCATGAAAGAAACCCTAGGGCAGTCCTCTTCAAAGAGGACAGACTGCAATGAGTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | GGGACTTGTGGCAATCTAACAACCACAACTGTTGTCTaGGCTCCTCCAGCTCTCTCTGGATACTCTCTATCA | + |
Preference number: 6 (lower is better) Translates to: GTCGNLTTTTVV*APPALSGYSLS Trigger: TGATAGAGAGTATCCAGAGAGAGCTGGAGGAGCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS CCA 72 bp | GTGGTACCATCTTCTGAGGAAGTACTTCGGGACTTGTaGCAATCTAACAACCACAACTGTTGTCTGCGCTCC | + |
Preference number: 6 (lower is better) Translates to: VVPSSEEVLRDL*QSNNHNCCLRS Trigger: GGAGCGCAGACAACAGTTGTGGTTGTTAGATTGCCACAAGTCCCGAAGTACTTCCTCAGAAGATGGTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161896.2 |
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CDS TCA 72 bp | TACTTCTTCTGTCGCTGCATCTTTGGGATTTCTCTCTaGAGTGGCGCTTCAGATGCTCGATCAGATGCGAGT | + |
Preference number: 6 (lower is better) Translates to: YFFCRCIFGISL*SGASDARSDAS Trigger: ACTCGCATCTGATCGAGCATCTGAAGCGCCACTTCAGAGAGAAATCCCAAAGATGCAGCGACAGAAGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 |
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CDS GCA 72 bp | TCCTCTTCTTCTACTTTCACTATGAGAAGGTCTGCTTaGTCTTGCGAAGTCTCAGCGGGAGGCTCTAAGTGT | + |
Preference number: 6 (lower is better) Translates to: SSSSTFTMRRSA*SCEVSAGGSKC Trigger: ACACTTAGAGCCTCCCGCTGAGACTTCGCAAGAGCAAGCAGACCTTCTCATAGTGAAAGTAGAAGAAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031601.8 ENSMUST00000085671.10 ENSMUST00000161896.2 |
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CDS CCA 72 bp | TCACAGGTATGTGCCACTGTACCCTGCAGTATGGACTaGTCTATTGACAAGGCCATTTTCTTCCAGAAGATT | + |
Preference number: 6 (lower is better) Translates to: SQVCATVPCSMD*SIDKAIFFQKI Trigger: AATCTTCTGGAAGAAAATGGCCTTGTCAATAGACCAGTCCATACTGCAGGGTACAGTGGCACATACCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162168.8 |