Pregenerated sensors for ZKSCAN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029627Ensembl transcript IDs: ENSMUST00000031632.9, ENSMUST00000162220.2, ENSMUST00000198959.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCATCCCCACTCTGCTTCCTCACAGCCAGGAAGTGAACATATGTaGTCCGGCAGACCCTTCTGTAGTGGTGCTCTGCCTTACCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LHPHSASSQPGSEHM*SGRPFCSGALPYPK Trigger: CTTGGGGTAAGGCAGAGCACCACTACAGAAGGGTCTGCCGGAGCACATATGTTCACTTCCTGGCTGTGAGGAAGCAGAGTGGGGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR GCA 90 bp | CATTCTAGGTGGAAGATGCAGAGGAATGTCCTGAGAGCTCTAGCTTaGCCTGACACCTTTCTGCATCCCCACTCTGCTTCCTCACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSRWKMQRNVLRALA*PDTFLHPHSASSQP Trigger: TGGCTGTGAGGAAGCAGAGTGGGGATGCAGAAAGGTGTCAGGGCAAGCTAGAGCTCTCAGGACATTCCTCTGCATCTTCCACCTAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 90 bp | GGCACCTTTAATCTCAACATACAGGAGGTAAAGCCAGAGGCAGGATaGCCTCTTGAGTTTGTGGCCAGCCTGGTCCACATAGCTACTGCC | + |
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Preference number: 1 (lower is better) Translates to: GTFNLNIQEVKPEAG*PLEFVASLVHIATA Trigger: GGCAGTAGCTATGTGGACCAGGCTGGCCACAAACTCAAGAGGTCATCCTGCCTCTGGCTTTACCTCCTGTATGTTGAGATTAAAGGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| 3UTR CCA 90 bp | AAGCTAGAGCTACAGATGGTTGTGAGCCCCCTCTATATGGGGTCCTaGGAACTGAGTTCATTCTCTGGAAGAGCAGCTCAGGGTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: KLELQMVVSPLYMGS*ELSSFSGRAAQGLK Trigger: TTTAAGACCCTGAGCTGCTCTTCCAGAGAATGAACTCAGTTCCCAGGACCCCATATAGAGGGGGCTCACAACCATCTGTAGCTCTAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR CCA 90 bp | CATAAGATCCTAATTCAACTGGGGACGAGGGAGAGACATTCTAGGTaGAAGATGCAGAGGAATGTCCTGAGAGCTCTAGCTTGCCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: HKILIQLGTRERHSR*KMQRNVLRALACPD Trigger: GTCAGGGCAAGCTAGAGCTCTCAGGACATTCCTCTGCATCTTCCACCTAGAATGTCTCTCCCTCGTCCCCAGTTGAATTAGGATCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 90 bp | TTCTCATTCAAAGTGTGTGTGTGTAGACAACCAGGCTGTATTCTCTaGATCATCACGACTGGGCACGCGGGCACGTTAATGCAGATGCCT | + |
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Preference number: 1 (lower is better) Translates to: FSFKVCVCRQPGCIL*IITTGHAGTLMQMP Trigger: AGGCATCTGCATTAACGTGCCCGCGTGCCCAGTCGTGATGATTCAGAGAATACAGCCTGGTTGTCTACACACACACACTTTGAATGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR GCA 90 bp | CAGAAGAGTGCTTCCTGTTTCTCTAGAAGACTGACCTGTGTTACGTaGCCAGTACCCACATTAGGCAACATACAACAGCACGTGATTCCA | + |
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Preference number: 1 (lower is better) Translates to: QKSASCFSRRLTCVT*PVPTLGNIQQHVIP Trigger: TGGAATCACGTGCTGTTGTATGTTGCCTAATGTGGGTACTGGGCACGTAACACAGGTCAGTCTTCTAGAGAAACAGGAAGCACTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR CCA 90 bp | GGCATGTGCTACCTGGTTCCTCCTATAACCTTGAAAAACTTTCTGTaGATCATCTATGACAGTCTAGGGAAGGCAAGGGTGAAATATTCG | + |
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Preference number: 1 (lower is better) Translates to: GMCYLVPPITLKNFL*IIYDSLGKARVKYS Trigger: CGAATATTTCACCCTTGCCTTCCCTAGACTGTCATAGATGATCCACAGAAAGTTTTTCAAGGTTATAGGAGGAACCAGGTAGCACATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 90 bp | CCTTTAATCCCTGAACTTTGGAGGTACAGTAAAAGTGGATCTCTGTaGGTTAAAGGTCAGTCTGGTATAATATATAATGAGTTCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: PLIPELWRYSKSGSL*VKGQSGIIYNEFKS Trigger: TGACTTGAACTCATTATATATTATACCAGACTGACCTTTAACTCACAGAGATCCACTTTTACTGTACCTCCAAAGTTCAGGGATTAAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACCCTTCTGTAGTGGTGCTCTGCCTTACCCCAAGCCCAGGAACAATGAATTGGGGTCCTGGGAACTaGGTTCATTCTCTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ADPSVVVLCLTPSPGTMNWGPGN*VHSLEE Trigger: CTCTTCCAGAGAATGAACTCAGTTCCCAGGACCCCA...ATTCATTGTTCCTGGGCTTGGGGTAAGGCAGAGCACCACTACAGAAGGGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACCCTTCTGTAGTGGTGCTCTGCCTTACCCCAAGCCCAGGAACAATGAATACTGAGTTCATTCTCTaGAAGAGCAGCTCAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ADPSVVVLCLTPSPGTMNTEFIL*KSSSGS Trigger: AGACCCTGAGCTGCTCTTCCAGAGAATGAACTCAGT...ATTCATTGTTCCTGGGCTTGGGGTAAGGCAGAGCACCACTACAGAAGGGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGACCCTTCTGTAGTGGTGCTCTGCCTTACCCCAAGCCCAGGAACAATGAATTACTACCTTGTTCTGTaGTCCTTGATCACCCCTACA | + |
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Preference number: 2 (lower is better) Translates to: ADPSVVVLCLTPSPGTMNYYLVL*SLITPT Trigger: TGTAGGGGTGATCAAGGAGCACAGAACAAGGTAGTA...ATTCATTGTTCCTGGGCTTGGGGTAAGGCAGAGCACCACTACAGAAGGGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR GCA 90 bp | GGGATTAAAGGCATGTGCTACCTGGTTCCTCCTATAACCTTGAAAAACTTTCTGGCCCTGACACCTTTCTaGATCCCCACTCTGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GIKGMCYLVPPITLKNFLALTPF*IPTLLP Trigger: AGGAAGCAGAGTGGGGATGCAGAAAGGTGTCAGGGC...CAGAAAGTTTTTCAAGGTTATAGGAGGAACCAGGTAGCACATGCCTTTAATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCATTTTCGAAACCCAAGATCCCAAAATCTGAAGTGCTTGAATGTCTGCCACGAGCAGGAGAGATaGATCAGAAGAGTGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQHFRNPRSQNLKCLNVCHEQER*IRRVLP Trigger: AGGAAGCACTCTTCTGATTCATCTCTCCTGCTCGTG...GCAGACATTCAAGCACTTCAGATTTTGGGATCTTGGGTTTCGAAAATGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATTAAAGGCATGTGCTACCTGGTTCCTCCTATAACCTTGAAAAACTTTCTGTCCCTCGTGCTGAGATaGAAAAACATAGCTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: GIKGMCYLVPPITLKNFLSLVLR*KNIAKV Trigger: TACTTTAGCTATGTTTTTCCATCTCAGCACGAGGGA...CAGAAAGTTTTTCAAGGTTATAGGAGGAACCAGGTAGCACATGCCTTTAATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGACAATGATTGTAGATTGTATTCTAAAAGGCACACGCGAGCTCTGTTTCAAAAAAGTGGATCTCTGTaGGTTAAAGGTCAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TDNDCRLYSKRHTRALFQKSGSL*VKGQSG Trigger: ACCAGACTGACCTTTAACTCACAGAGATCCACTTTT...TTGAAACAGAGCTCGCGTGTGCCTTTTAGAATACAATCTACAATCATTGTCAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR GCA 72 bp | CACTCTGCTTCCTCACAGCCAGGAAGTGAACATATGTaGTCCGGCAGACCCTTCTGTAGTGGTGCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: HSASSQPGSEHM*SGRPFCSGALP Trigger: AGGCAGAGCACCACTACAGAAGGGTCTGCCGGAGCACATATGTTCACTTCCTGGCTGTGAGGAAGCAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 72 bp | GATGCAGAGGAATGTCCTGAGAGCTCTAGCTTGCCCTaGCACCTTTCTGCATCCCCACTCTGCTTCCTCACA | + |
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Preference number: 3 (lower is better) Translates to: DAEECPESSSLP*HLSASPLCFLT Trigger: TGTGAGGAAGCAGAGTGGGGATGCAGAAAGGTGTCAGGGCAAGCTAGAGCTCTCAGGACATTCCTCTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR GCA 72 bp | ATATGTGCTCCGGCAGACCCTTCTGTAGTGGTGCTCTaGCTTACCCCAAGCCCAGGAACAATGAATTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ICAPADPSVVVL*LTPSPGTMNSA Trigger: AGCTGAATTCATTGTTCCTGGGCTTGGGGTAAGGCAGAGCACCACTACAGAAGGGTCTGCCGGAGCACATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR CCA 72 bp | CTACAGATGGTTGTGAGCCCCCTCTATATGGGGTCCTaGGAACTGAGTTCATTCTCTGGAAGAGCAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LQMVVSPLYMGS*ELSSFSGRAAQ Trigger: CTGAGCTGCTCTTCCAGAGAATGAACTCAGTTCCCAGGACCCCATATAGAGGGGGCTCACAACCATCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 72 bp | AATCTCAACATACAGGAGGTAAAGCCAGAGGCAGGATaGCCTCTTGAGTTTGTGGCCAGCCTGGTCCACATA | + |
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Preference number: 3 (lower is better) Translates to: NLNIQEVKPEAG*PLEFVASLVHI Trigger: TATGTGGACCAGGCTGGCCACAAACTCAAGAGGTCATCCTGCCTCTGGCTTTACCTCCTGTATGTTGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| 3UTR TCA 72 bp | AAAGTGTGTGTGTGTAGACAACCAGGCTGTATTCTCTaGATCATCACGACTGGGCACGCGGGCACGTTAATG | + |
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Preference number: 3 (lower is better) Translates to: KVCVCRQPGCIL*IITTGHAGTLM Trigger: CATTAACGTGCCCGCGTGCCCAGTCGTGATGATTCAGAGAATACAGCCTGGTTGTCTACACACACACACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 72 bp | CCACATAGCTACTGCCAGATAGCCAGGGCTACACAGTaGGACCTTTTCTCAACAGTAGCAACAACAAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: PHSYCQIARATQ*DLFSTVATTKA Trigger: GGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCCCTGGCTATCTGGCAGTAGCTATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| 3UTR TCA 72 bp | TCCTATAACCTTGAAAAACTTTCTGTGGATCATCTATaGCAGTCTAGGGAAGGCAAGGGTGAAATATTCGAG | + |
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Preference number: 3 (lower is better) Translates to: SYNLEKLSVDHL*QSREGKGEIFE Trigger: CTCGAATATTTCACCCTTGCCTTCCCTAGACTGTCATAGATGATCCACAGAAAGTTTTTCAAGGTTATAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| 3UTR TCA 72 bp | AATATTTTGAGATTAGCTTTTCACGAGCAGGAGAGATaGATCAGAAGAGTGCTTCCTGTTTCTCTAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: NILRLAFHEQER*IRRVLPVSLED Trigger: GTCTTCTAGAGAAACAGGAAGCACTCTTCTGATTCATCTCTCCTGCTCGTGAAAAGCTAATCTCAAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS-3UTR CCA 90 bp | AGAGCTCTAGCTTGCCCTGACACCTTTCTGCATCCCCACTCTGCTTCCTCACAGCCCAGCACCGAGAGGTaGCGGGACGACCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RALACPDTFLHPHSASSQPSTER*RDDPRA Trigger: GGCTCTGGGGTCGTCCCGCCACCTCTCGGTGCTGGG...CTGTGAGGAAGCAGAGTGGGGATGCAGAAAGGTGTCAGGGCAAGCTAGAGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS-3UTR CCA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACACCCAGCACCGAGAGGTaGCGGGACGACCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPFLNSSNNKSHVSHAETPSTER*RDDPRA Trigger: GGCTCTGGGGTCGTCCCGCCACCTCTCGGTGCTGGG...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTGTGTGTGTCCGCTGGTaGTTAACGAGGGCAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSVCVRW*LTRAAL Trigger: GAGCGCTGCCCTCGTTAAGCACCAGCGGACACACAC...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCATGGTCATCCCCACACTaGCTGTTGGTGCCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVRPFLNSSNNKSHVSHAWSSPH*LLVPSP Trigger: AGGACTGGGCACCAACAGTCAGTGTGGGGATGACCA...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACAGGTGCCCAGTCCTTCTaGTGTCTGGATGTGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: RPFLNSSNNKSHVSHAETGAQSF*CLDVLT Trigger: GGTCAGCACATCCAGACAGCAGAAGGACTGGGCACC...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCACCCCACACTGACTGTTaGTGCCCAGTCCTTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TVRPFLNSSNNKSHVSHAPHTDC*CPVLLL Trigger: CAGCAGAAGGACTGGGCACCAACAGTCAGTGTGGGG...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGCTGTCTGGATGTGCTaGCCAAGGACAGAACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVRPFLNSSNNKSHVSHAAVWMC*PRTELP Trigger: TGGCAGTTCTGTCCTTGGTCAGCACATCCAGACAGC...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGGGTTCTCTGGTGCTTaGAGAGGTCTGAGCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHGFSGA*RGLSAV Trigger: GACAGCGCTCAGACCTCTTCAAGCACCAGAGAACCC...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTGAAACCTTTCCGAGCTaGAGCCAGCTGTTCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSETFPS*SQLFPL Trigger: GAGTGGGAACAGCTGGCTGCAGCTCGGAAAGGTTTC...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACATGGCAGTGCGTCCTTaGTCTTCAGAACCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHMAVRP*SSEPWS Trigger: GCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCAT...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTTGCTCTTCAGAACCCTaGAGCTGCAGCAGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSCSSEP*SCSSTA Trigger: TGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCA...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCTGTCCACAGAGCTGTaGGGCTTCACTGAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSLSTEL*GFTEWH Trigger: ATGCCATTCAGTGAAGCCCCACAGCTCTGTGGACAG...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACAGCTGTGGGGCTTCACTaGATGGCATTTCACATGGAA | + |
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Preference number: 4 (lower is better) Translates to: RPFLNSSNNKSHVSHAETAVGLH*MAFHME Trigger: TTCCATGTGAAATGCCATTCAGTGAAGCCCCACAGC...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTTCAGAACCCTGGAGCTaGAGCAGTACAGCAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSSEPWS*SSTAAF Trigger: AAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGA...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCATTGTCTTCCTGGAACTaGCTCTGGGTCTCAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TVRPFLNSSNNKSHVSHALSSWN*LWVSRS Trigger: GCTTCTTGAGACCCAGAGGCAGTTCCAGGAAGACAA...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACAGCTGGGACCATTCCCTaGGATACTTCTTGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPFLNSSNNKSHVSHAETAGTIP*DTSCSH Trigger: ATGGCTACAAGAAGTATCCCAGGGAATGGTCCCAGC...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACCCTCTGTGTAGTCTCTaGTGTCTGAACAGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHPLCSL*CLNRLE Trigger: TTCCAGCCTGTTCAGACATCAGAGACTACACAGAGG...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | GGGATTAAAGGCATGTGCTACCTGGTTCCTCCTATAACCTTGAAAAACTTTCTGATCTCTCTGGTGCCATaGAGAGTCCACTCGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GIKGMCYLVPPITLKNFLISLVP*RVHSSL Trigger: GAGACTCGAGTGGACTCTGCATGGCACCAGAGAGAT...CAGAAAGTTTTTCAAGGTTATAGGAGGAACCAGGTAGCACATGCCTTTAATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS-3UTR CCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCAGTACAGCAGCTTTTaGCAGCTTTTCTTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSQYSSF*QLFFPV Trigger: GACTGGGAAGAAAAGCTGCCAAAAGCTGCTGTACTG...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACACATTTGGTAAGTGCTaGGACCATTCCCTGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHTFGKC*DHSLGY Trigger: GTATCCCAGGGAATGGTCCCAGCACTTACCAAATGT...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CCA 90 bp | GGCTACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTTGGGGCTTCACTGAATaGCATTTCACATGGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: GYTVRPFLNSSNNKSHVSWGFTE*HFTWKP Trigger: AGGTTTCCATGTGAAATGCCATTCAGTGAAGCCCCA...ACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR TCA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGTAGTCTCTGATGTCTaGACAGGCTGGAAACATGAA | + |
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Preference number: 4 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHVVSDV*TGWKHE Trigger: TTCATGTTTCCAGCCTGTTCAGACATCAGAGACTAC...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR GCA 90 bp | ACTGACAATGATTGTAGATTGTATTCTAAAAGGCACACGCGAGCTCTGTTTCAAAAGCCATCTCTCTGGTaGCATGCAGAGTCCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: TDNDCRLYSKRHTRALFQKPSLW*HAESTR Trigger: TCGAGTGGACTCTGCATGGCACCAGAGAGATGGCTT...TTGAAACAGAGCTCGCGTGTGCCTTTTAGAATACAATCTACAATCATTGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAATGGCATTTCACATaGAAACCTTGTTTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TVRPFLNSSNNKSHVSHAEWHFT*KPCLWS Trigger: TGACCACAAACAAGGTTTCCATGTGAAATGCCATTC...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS GCA 90 bp | ATGCAGAGTCCACTCGAGTCTCACCTGCGGAGAGGCCCGATCCAGTaGTCTTTGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCCACT | + |
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Preference number: 5 (lower is better) Translates to: MQSPLESHLRRGPIQ*SLQSPRQGRSLLPT Trigger: AGTGGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGTGAGACTCGAGTGGACTCTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS GCA 90 bp | CACATCCTTGAAGGTCATAAAACCCTGCGGAGAGGCCCGATCCAGTaGTCTTTGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCCACT | + |
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Preference number: 5 (lower is better) Translates to: HILEGHKTLRRGPIQ*SLQSPRQGRSLLPT Trigger: AGTGGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGGTTTTATGACCTTCAAGGATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS TCA 90 bp | TCAGCGCCTCCTCAGGGCCGGCCACTTCCTGGTAGCGCAACTGCCTaGATTGTTTTCGAGAAGTTTCGGGGTTCTGCCAATCTCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SAPPQGRPLPGSATA*IVFEKFRGSANLRN Trigger: GTTCCGGAGATTGGCAGAACCCCGAAACTTCTCGAAAACAATTCAGGCAGTTGCGCTACCAGGAAGTGGCCGGCCCTGAGGAGGCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000198959.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGGGTCAGAAATGCTAGGGTCATACTCTTCCCTCTACATAGTGGGCTGCCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GRRVRNARVILFPLHSGLPIQCS*QSPRQG Trigger: GCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGG...CAGCCCACTATGTAGAGGGAAGAGTATGACCCTAGCATTTCTGACCCTCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS GCA 90 bp | GCTCCCAGCGTCCTTTGTGCTCTCTTCACAGAAACCTTTCCGAGCTaGAGCCAGCTGTTCCCACTCTTCCCAGGTCAGAGATTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: APSVLCALFTETFPS*SQLFPLFPGQRFSH Trigger: GTGGCTGAATCTCTGACCTGGGAAGAGTGGGAACAGCTGGCTGCAGCTCGGAAAGGTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CCA 90 bp | CCGATGAGAAGCGGGATGGCAGTGCGTCCTTGCTCTTCAGAACCCTaGAGCTGCAGCAGTACAGCAGCTTTTGGCAGCTTTTCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PMRSGMAVRPCSSEP*SCSSTAAFGSFSSQ Trigger: CTGGGAAGAAAAGCTGCCAAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCATCCCGCTTCTCATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS GCA 90 bp | TTCGTGTTTCCAAGCCAGGCACAACTGTGCTCCCAGCGTCCTTTGTaGTCTCTTCACAGAAACCTTTCCGAGCTGCAGCCAGCTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FVFPSQAQLCSQRPL*SLHRNLSELQPAVP Trigger: GGGAACAGCTGGCTGCAGCTCGGAAAGGTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGCACAGTTGTGCCTGGCTTGGAAACACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS GCA 90 bp | AGAAGCGGGATGGCAGTGCGTCCTTGCTCTTCAGAACCCTGGAGCTaGAGCAGTACAGCAGCTTTTGGCAGCTTTTCTTCCCAGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RSGMAVRPCSSEPWS*SSTAAFGSFSSQSS Trigger: TGAGGACTGGGAAGAAAAGCTGCCAAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCATCCCGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS-3UTR CAA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACACCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RPFLNSSNNKSHVSHAETPIQCS*QSPRQG Trigger: GCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGG...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS CCA 90 bp | TCCTCAGAGGGGTCACCACATTTGGTAAGTGCTGGGACCATTCCCTaGGATACTTCTTGTAGCCATGCCTGTGGCTCTGCCTCCTTTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSEGSPHLVSAGTIP*DTSCSHACGSASFK Trigger: TTTAAAGGAGGCAGAGCCACAGGCATGGCTACAAGAAGTATCCCAGGGAATGGTCCCAGCACTTACCAAATGTGGTGACCCCTCTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS TCA 90 bp | CTCAAGAAGCCCTACAGCACTGTCCACAGAGCTGTGGGGCTTCACTaGATGGCATTTCACATGGAAACCTTGTTTGTGGTCATCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: LKKPYSTVHRAVGLH*MAFHMETLFVVIPT Trigger: TGTGGGGATGACCACAAACAAGGTTTCCATGTGAAATGCCATTCAGTGAAGCCCCACAGCTCTGTGGACAGTGCTGTAGGGCTTCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS-3UTR CAA 90 bp | AGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGACATGCTCCCAGCGTCCTTaGTGCTCTCTTCACAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RPFLNSSNNKSHVSHAETCSQRP*CSLHRN Trigger: GTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGCA...TGTCTCTGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGAGGGGTCACCACATTaGGTAAGTGCTGGGACCATT | + |
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Preference number: 5 (lower is better) Translates to: TVRPFLNSSNNKSHVSHAEGSPH*VSAGTI Trigger: AATGGTCCCAGCACTTACCAAATGTGGTGACCCCTC...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CAA 90 bp | TACACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCAGTACAGCAGCTTTaGGCAGCTTTTCTTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: YTVRPFLNSSNNKSHVSHAVQQL*AAFLPS Trigger: ACTGGGAAGAAAAGCTGCCAAAAGCTGCTGTACTGC...GTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGACCTTTTCTCAACAGTAGCAACAACAAAAGCCACGTGAGTCACGCACTGTTCTCAGACTCATaGTTTTTAGAGTCCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TVRPFLNSSNNKSHVSHALFSDS*FLESLS Trigger: GGAAAGGGACTCTAAAAACAATGAGTCTGAGAACAG...TGCGTGACTCACGTGGCTTTTGTTGTTGCTACTGTTGAGAAAAGGTCTCACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS CAA 72 bp | GAGTCTCACCTGCGGAGAGGCCCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ESHLRRGPIQCS*QSPRQGRSLLP Trigger: GGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGTGAGACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS CAA 72 bp | CATAAAACCCTGCGGAGAGGCCCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HKTLRRGPIQCS*QSPRQGRSLLP Trigger: GGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGGTTTTATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS CAA 90 bp | AGTCCACTCGAGTCTCACCTGCGGAGAGGCCCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCCACTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPLESHLRRGPIQCS*QSPRQGRSLLPTFR Trigger: CCTGAAAGTGGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGTGAGACTCGAGTGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS CAA 90 bp | CTTGAAGGTCATAAAACCCTGCGGAGAGGCCCGATCCAGTGCTCTTaGCAGAGTCCGCGCCAAGGCCGCAGCCTCCTCCCCACTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LEGHKTLRRGPIQCS*QSPRQGRSLLPTFR Trigger: CCTGAAAGTGGGGAGGAGGCTGCGGCCTTGGCGCGGACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGGTTTTATGACCTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031632.9 |
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| CDS GCA 72 bp | TCTCTGGTGCCATGCAGAGTCCACTCGAGTCTCACCTaGGGAGAGGCCCGATCCAGTGCTCTTTGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLVPCRVHSSLT*GEARSSALCRV Trigger: GACTCTGCAAAGAGCACTGGATCGGGCCTCTCCGCAGGTGAGACTCGAGTGGACTCTGCATGGCACCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198959.2 |
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| CDS GCA 72 bp | GACACACCGATGAGAAGCGGGATGGCAGTGCGTCCTTaGTCTTCAGAACCCTGGAGCTGCAGCAGTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: DTPMRSGMAVRP*SSEPWSCSSTA Trigger: TGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCATCCCGCTTCTCATCGGTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS GCA 72 bp | CCAAGCCAGGCACAACTGTGCTCCCAGCGTCCTTTGTaGTCTCTTCACAGAAACCTTTCCGAGCTGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSQAQLCSQRPL*SLHRNLSELQP Trigger: TGGCTGCAGCTCGGAAAGGTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGCACAGTTGTGCCTGGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS GCA 72 bp | GTCATCCCCACACTGACTGTTGGTGCCCAGTCCTTCTaGTGTCTGGATGTGCTGACCAAGGACAGAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: VIPTLTVGAQSF*CLDVLTKDRTA Trigger: GGCAGTTCTGTCCTTGGTCAGCACATCCAGACAGCAGAAGGACTGGGCACCAACAGTCAGTGTGGGGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CCA 72 bp | AGCGGGATGGCAGTGCGTCCTTGCTCTTCAGAACCCTaGAGCTGCAGCAGTACAGCAGCTTTTGGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SGMAVRPCSSEP*SCSSTAAFGSF Trigger: AAAGCTGCCAAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCATCCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS TCA 72 bp | CCTCAGGGCCGGCCACTTCCTGGTAGCGCAACTGCCTaGATTGTTTTCGAGAAGTTTCGGGGTTCTGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PQGRPLPGSATA*IVFEKFRGSAN Trigger: ATTGGCAGAACCCCGAAACTTCTCGAAAACAATTCAGGCAGTTGCGCTACCAGGAAGTGGCCGGCCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000198959.2 |
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| CDS CCA 72 bp | GGGTCACCACATTTGGTAAGTGCTGGGACCATTCCCTaGGATACTTCTTGTAGCCATGCCTGTGGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSPHLVSAGTIP*DTSCSHACGSA Trigger: GGCAGAGCCACAGGCATGGCTACAAGAAGTATCCCAGGGAATGGTCCCAGCACTTACCAAATGTGGTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CAA 72 bp | CTTCAGAACCCTGGAGCTGCAGCAGTACAGCAGCTTTaGGCAGCTTTTCTTCCCAGTCCTCAGAGGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LQNPGAAAVQQL*AAFLPSPQRGH Trigger: GTGACCCCTCTGAGGACTGGGAAGAAAAGCTGCCAAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CAA 90 bp | CAGTTCGTGTTTCCAAGCCAGGCACAACTGTGCTCCCAGCGTCCTTaGTGCTCTCTTCACAGAAACCTTTCCGAGCTGCAGCCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QFVFPSQAQLCSQRP*CSLHRNLSELQPAV Trigger: AACAGCTGGCTGCAGCTCGGAAAGGTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGCACAGTTGTGCCTGGCTTGGAAACACGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS TCA 72 bp | CTGTTGGTGCCCAGTCCTTCTGCTGTCTGGATGTGCTaGCCAAGGACAGAACTGCCACTGTTCTCAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LLVPSPSAVWMC*PRTELPLFSDS Trigger: TGAGTCTGAGAACAGTGGCAGTTCTGTCCTTGGTCAGCACATCCAGACAGCAGAAGGACTGGGCACCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS GCA 72 bp | ATGGCAGTGCGTCCTTGCTCTTCAGAACCCTGGAGCTaGAGCAGTACAGCAGCTTTTGGCAGCTTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: MAVRPCSSEPWS*SSTAAFGSFSS Trigger: GGAAGAAAAGCTGCCAAAAGCTGCTGTACTGCTGCAGCTCCAGGGTTCTGAAGAGCAAGGACGCACTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CCA 72 bp | GGAAACCTTGTTTGTGGTCATCCCCACACTGACTGTTaGTGCCCAGTCCTTCTGCTGTCTGGATGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GNLVCGHPHTDC*CPVLLLSGCAD Trigger: GTCAGCACATCCAGACAGCAGAAGGACTGGGCACCAACAGTCAGTGTGGGGATGACCACAAACAAGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CAA 72 bp | TTTCCAAGCCAGGCACAACTGTGCTCCCAGCGTCCTTaGTGCTCTCTTCACAGAAACCTTTCCGAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: FPSQAQLCSQRP*CSLHRNLSELQ Trigger: CTGCAGCTCGGAAAGGTTTCTGTGAAGAGAGCACAAAGGACGCTGGGAGCACAGTTGTGCCTGGCTTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS TCA 72 bp | TTCACATGGAAACCTTGTTTGTGGTCATCCCCACACTaGCTGTTGGTGCCCAGTCCTTCTGCTGTCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: FTWKPCLWSSPH*LLVPSPSAVWM Trigger: CATCCAGACAGCAGAAGGACTGGGCACCAACAGTCAGTGTGGGGATGACCACAAACAAGGTTTCCATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS TCA 72 bp | CCCTACAGCACTGTCCACAGAGCTGTGGGGCTTCACTaGATGGCATTTCACATGGAAACCTTGTTTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PYSTVHRAVGLH*MAFHMETLFVV Trigger: GACCACAAACAAGGTTTCCATGTGAAATGCCATTCAGTGAAGCCCCACAGCTCTGTGGACAGTGCTGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CAA 72 bp | AGCTTTTCTTCCCAGTCCTCAGAGGGGTCACCACATTaGGTAAGTGCTGGGACCATTCCCTGGGATACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SFSSQSSEGSPH*VSAGTIPWDTS Trigger: AGAAGTATCCCAGGGAATGGTCCCAGCACTTACCAAATGTGGTGACCCCTCTGAGGACTGGGAAGAAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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| CDS CCA 72 bp | ACAGCACTGTCCACAGAGCTGTGGGGCTTCACTGAATaGCATTTCACATGGAAACCTTGTTTGTGGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: TALSTELWGFTE*HFTWKPCLWSS Trigger: GGATGACCACAAACAAGGTTTCCATGTGAAATGCCATTCAGTGAAGCCCCACAGCTCTGTGGACAGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031632.9 ENSMUST00000162220.2 |
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