Pregenerated sensors for ZIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002266Ensembl transcript IDs: ENSMUST00000002336.16, ENSMUST00000122432.4, ENSMUST00000203908.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGGGGTAGGAGTCCTGCGGGTGGGCACTGGCCAGTCGGAGTTCTaGAAGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCT | + |
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Preference number: 1 (lower is better) Translates to: VGVGVLRVGTGQSEF*KCSKHHRLQHIHKP Trigger: AGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTGCCCACCCGCAGGACTCCTACCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR GCA 90 bp | AGGGTGAGAAAGGACCAGCCAGTTCTCAGACCACTTCCCAACTGCTaGAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: RVRKDQPVLRPLPNC*SLARIFFGMYLGER Trigger: TCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCAGCAGTTGGGAAGTGGTCTGAGAACTGGCTGGTCCTTTCTCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR GCA 90 bp | TCAAGGGTGAGAAAGGACCAGCCAGTTCTCAGACCACTTCCCAACTaGTGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SRVRKDQPVLRPLPN*CSLARIFFGMYLGE Trigger: CTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCAGCAGTTGGGAAGTGGTCTGAGAACTGGCTGGTCCTTTCTCACCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR TCA 90 bp | CTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTTTAACCACTaGCTCCATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATG | + |
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Preference number: 1 (lower is better) Translates to: LELGSSHFPGKGFNH*LHSSKTCLPTRRDM Trigger: CATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATGGAGTCAGTGGTTAAAGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR TCA 90 bp | ATGCCTTTAATCCCAGTACTTAAGAGGCAGAGATGGGAGGATCTCTaGGAGTTCAAGGACAGCCTGGTCTACATTCCAAGACAGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: MPLIPVLKRQRWEDL*EFKDSLVYIPRQPG Trigger: TCCTGGCTGTCTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCTGCCTCTTAAGTACTGGGATTAAAGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | TTTGGAGCCTGGAATTACACCCACCTGTACATGGATTCTGGAGACTaGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTTTAACCACT | + |
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Preference number: 1 (lower is better) Translates to: FGAWNYTHLYMDSGD*NLGLHTFLARALTT Trigger: AGTGGTTAAAGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCAGGCTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | GAGCTAGCTTGCTCTGGAGACTCCATCTCCTTTTTCTTTGGAGCCTaGAATTACACCCACCTGTACATGGATTCTGGAGACTGGAACTTG | + |
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Preference number: 1 (lower is better) Translates to: ELACSGDSISFFFGA*NYTHLYMDSGDWNL Trigger: CAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCAGGCTCCAAAGAAAAAGGAGATGGAGTCTCCAGAGCAAGCTAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | TTAAGAGGCAGAGATGGGAGGATCTCTGAGAGTTCAAGGACAGCCTaGTCTACATTCCAAGACAGCCAGGACTACATAGAGAAACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LRGRDGRISESSRTA*STFQDSQDYIEKPC Trigger: ACAGGGTTTCTCTATGTAGTCCTGGCTGTCTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCTGCCTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | CTTTTTCTTTGGAGCCTGGAATTACACCCACCTGTACATGGATTCTaGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LFLWSLELHPPVHGF*RLELGSSHFPGKGF Trigger: AAAGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCAGGCTCCAAAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | CCATCTCCTTTTTCTTTGGAGCCTGGAATTACACCCACCTGTACATaGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: PSPFSLEPGITPTCT*ILETGTWVFTLSWQ Trigger: TTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCAGGCTCCAAAGAAAAAGGAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR GCA 90 bp | AGGAAGTTATTGCTGATAAATGCTTCAGTGAAGTTGCTCTTCAACTaGTCTGTCGCTGTCCATGCTACTGCAGAGGGATGGGTCTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RKLLLINASVKLLFN*SVAVHATAEGWVLS Trigger: AGACAAGACCCATCCCTCTGCAGTAGCATGGACAGCGACAGAGCAGTTGAAGAGCAACTTCACTGAAGCATTTATCAGCAATAACTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | ACAAGTCTATGTGGTGTGTACCAAAACTCTTTTTCCAGCAGGCTGTaGCTAGATTTACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: TSLCGVYQNSFSSRL*LDLPRSCFLLSGGN Trigger: GTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAAATCTAGCCACAGCCTGCTGGAAAAAGAGTTTTGGTACACACCACATAGACTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | AACACTTCCTCCATAATTTACTGCAGTTCCTCAGCCATTAAGAGGTaGCTAGCCAACTTTCCACTGGCCATACAGTCTTCTTGGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: NTSSIIYCSSSAIKR*LANFPLAIQSSWLN Trigger: ATTCAGCCAAGAAGACTGTATGGCCAGTGGAAAGTTGGCTAGCCACCTCTTAATGGCTGAGGAACTGCAGTAAATTATGGAGGAAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR GCA 90 bp | TTTCCTCATTACGGAGAATGCTCCAGCCTATTGAAAGAAGGACGATaGAGAGAAATACACAGAGCTCCAGAGATGTCTTGGCTGTATCAA | + |
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Preference number: 1 (lower is better) Translates to: FPHYGECSSLLKEGR*REIHRAPEMSWLYQ Trigger: TTGATACAGCCAAGACATCTCTGGAGCTCTGTGTATTTCTCTGCATCGTCCTTCTTTCAATAGGCTGGAGCATTCTCCGTAATGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR GCA 90 bp | AAGGGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTaGCTCTATCCACAGATGCAGTTGATAGTAGTACCTGTCTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: KGVCLVHCRMFDIIL*LYPQMQLIVVPVCW Trigger: CCAACAGACAGGTACTACTATCAACTGCATCTGTGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR CCA 90 bp | ATCACCAGAGATAGCTCCAAACAGAGTCCTGGATTTCTTCATCTGTaGCTTTTCTACTCTCATGTGAAGATATCTGTGTGCCCTCTAATC | + |
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Preference number: 1 (lower is better) Translates to: ITRDSSKQSPGFLHL*LFYSHVKISVCPLI Trigger: GATTAGAGGGCACACAGATATCTTCACATGAGAGTAGAAAAGCCACAGATGAAGAAATCCAGGACTCTGTTTGGAGCTATCTCTGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CCA 90 bp | AAAGAAGGACGATGCAGAGAAATACACAGAGCTCCAGAGATGTCTTaGCTGTATCAAGTTCTTGATTCTGATGGAGGTTCATCGCTATCA | + |
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Preference number: 1 (lower is better) Translates to: KEGRCREIHRAPEMS*LYQVLDSDGGSSLS Trigger: TGATAGCGATGAACCTCCATCAGAATCAAGAACTTGATACAGCCAAGACATCTCTGGAGCTCTGTGTATTTCTCTGCATCGTCCTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR TCA 90 bp | ACATTGATGTCCGGAATCATGTTGTTACTCTTCCACCTTGTGCATTaGAGCAAGGTCTCTCAATCAAATCCAGAACTCTCTGATGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: TLMSGIMLLLFHLVH*SKVSQSNPELSDVA Trigger: AGCTACATCAGAGAGTTCTGGATTTGATTGAGAGACCTTGCTTCAATGCACAAGGTGGAAGAGTAACAACATGATTCCGGACATCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAGGCTCACTAGCCAATaGAGACTGGGAATGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: ASRSSESAPNITGSSTFTRLTSQ*RLGMSM Trigger: CATTGACATTCCCAGTCTTCATTGGCTAGTGAGCCT...TGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAGACAGAGAGCCTAGGATCACTCTACCTCTGCTCCCAAATCTATTGGCTGCTGTCATCCCAACTTTaGAAAAGTTGGGGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DKTESLGSLYLCSQIYWLLSSQL*KSWGRK Trigger: CTTCCTGCCCCAACTTTTCCAAAGTTGGGATGACAG...CAGCCAATAGATTTGGGAGCAGAGGTAGAGTGATCCTAGGCTCTCTGTCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTCAGCGATGCCACCTTTaGGTCAGCCTTCCTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CSLARIFFGMYLGERHSLQRCHL*VSLPLL Trigger: AAGCAAAGGAAGGCTGACTCAAAGGTGGCATCGCTG...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGATGGGAGGATCTCTGAGAGTTCAAGGACAGCCTGGTCTACATTCCAAGGCTCCAGAGATGTCTTaGCTGTATCAAGTTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: AEMGGSLRVQGQPGLHSKAPEMS*LYQVLD Trigger: ATCAAGAACTTGATACAGCCAAGACATCTCTGGAGC...CTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CAA 90 bp | CATGGTCATGCACACAAACACACACAGGTGGTCTGTACTGGATTGTaGTACCATATATCATTGACACGGAGAGAGACAGCGCAAGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: HGHAHKHTQVVCTGL*YHISLTRRETAQEF Trigger: GAACTCTTGCGCTGTCTCTCTCCGTGTCAATGATATATGGTACAACAATCCAGTACAGACCACCTGTGTGTGTTTGTGTGCATGACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACAGGCTCACTAGCCAATaGAGACTGGGAATGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNRLTSQ*RLGMSM Trigger: CATTGACATTCCCAGTCTTCATTGGCTAGTGAGCCT...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCCTGACAGAGTCTATTCTCTCCTTCCATCATGTGAAACCCTTGGATTGTCAGCCATTAAGAGGTaGCTAGCCAACTTTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: RQPDRVYSLLPSCETLGLSAIKR*LANFPL Trigger: CAGTGGAAAGTTGGCTAGCCACCTCTTAATGGCTGA...CAATCCAAGGGTTTCACATGATGGAAGGAGAGAATAGACTCTGTCAGGCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CAA 90 bp | TACTGTAGTGGCTGGCAGAGAAAAGTCCACCTGAATTCCTCAAATTaGCATGCCAACCAGATCTTCCTTAGTTATTGGAAGGCAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YCSGWQRKVHLNSSN*HANQIFLSYWKARE Trigger: CTCCCTTGCCTTCCAATAACTAAGGAAGATCTGGTTGGCATGCAAATTTGAGGAATTCAGGTGGACTTTTCTCTGCCAGCCACTACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR CAA 90 bp | CATTATGTAGCCACCTTTCCTCATTACGGAGAATGCTCCAGCCTATaGAAAGAAGGACGATGCAGAGAAATACACAGAGCTCCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: HYVATFPHYGECSSL*KEGRCREIHRAPEM Trigger: CATCTCTGGAGCTCTGTGTATTTCTCTGCATCGTCCTTCTTTCAATAGGCTGGAGCATTCTCCGTAATGAGGAAAGGTGGCTACATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | TCTCATAGGACTCCAATGAGAATTCGCTCTGCTAATTCATATACAGAGTTCAGCCACTCCATGATTTACTaGCCTCTGTCCCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SHRTPMRIRSANSYTEFSHSMIY*PLSQLL Trigger: CAGGAGCTGGGACAGAGGTCAGTAAATCATGGAGTG...GCTGAACTCTGTATATGAATTAGCAGAGCGAATTCTCATTGGAGTCCTATGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATCTTGGAGTCACCCCATaGAGGGATTATTGGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHLGVTP*RDYWSF Trigger: GAATGACCAATAATCCCTTCATGGGGTGACTCCAAG...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCCTGACAGAGTCTATTCTCTCCTTCCATCATGTGAAACCCTTGGATTGACGTGGGAGAGAGAATaGAAACAGAGGTTCAACATT | + |
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Preference number: 2 (lower is better) Translates to: RQPDRVYSLLPSCETLGLTWERE*KQRFNI Trigger: AATGTTGAACCTCTGTTTGCATTCTCTCTCCCACGT...CAATCCAAGGGTTTCACATGATGGAAGGAGAGAATAGACTCTGTCAGGCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CAA 90 bp | TCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTTCCTCTAAGTTaGAAAAGCATCCTCCCATTATGTAGCCACCTTTCCTCATTACGG | + |
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Preference number: 2 (lower is better) Translates to: SLGCIWERDILFPLS*KSILPLCSHLSSLR Trigger: CCGTAATGAGGAAAGGTGGCTACATAATGGGAGGATGCTTTTCAAACTTAGAGGAAAGAGAATGTCTCTCTCCCAGATACATCCCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | ATAATTTACTGCAGTTCCTCAGCCATTAAGAGGTGGCTAGCCAACTTTCCACTGCCAAAGACCCAAATGTaGGTTCTGGCTTTTAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: IIYCSSSAIKRWLANFPLPKTQM*VLAFKG Trigger: ACCTTTAAAAGCCAGAACTCACATTTGGGTCTTTGG...CAGTGGAAAGTTGGCTAGCCACCTCTTAATGGCTGAGGAACTGCAGTAAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACTCTGTTCCAATACTTTaGTACTGTCTTTGTAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNSVPIL*YCLCKP Trigger: GGGCTTACAAAGACAGTATCAAAGTATTGGAACAGA...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACTTTGACATCATCCTTTaGCTCTATCCACAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: SAPNITGSSTFTNLTKCYFDIIL*LYPQMQ Trigger: CTGCATCTGTGGATAGAGGCAAAGGATGATGTCAAA...GTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCATAGGACTCCAATGAGAATTCGCTCTGCTAATTCATATACAGAGTTCAGCCCATTCCAGCTCATTTaGCATTCAGAGTTGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SHRTPMRIRSANSYTEFSPFQLI*HSELAN Trigger: GTTGGCCAACTCTGAATGCCAAATGAGCTGGAATGG...GCTGAACTCTGTATATGAATTAGCAGAGCGAATTCTCATTGGAGTCCTATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACACAGCTACTAAGAAATaGAGGAACTGTTCATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SAPNITGSSTFTNLTKCYTATKK*RNCSCV Trigger: CACACATGAACAGTTCCTTCATTTCTTAGTAGCTGT...GTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR TCA 90 bp | TACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATAATTCTGTACACTCCATaGTTTACTGACCTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: YLGPAFCCQEATEIQDHIILYTP*FTDLCP Trigger: GGGACAGAGGTCAGTAAATCATGGAGTGTACAGAAT...TATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR CAA 90 bp | AAAGCACAGATAGATTCAGTTTCACAAAGCTGTGTCCTATTTTCCTaGGAGTCACCCCATGAAGGGATTATTGGTCATTCACATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KAQIDSVSQSCVLFS*ESPHEGIIGHSHQF Trigger: GAACTGATGTGAATGACCAATAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGAATCTATCTGTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAACAGCTACTAAGAAATaGAGGAACTGTTCATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GVCLVHCRMFDIILCLYPTATKK*RNCSCV Trigger: CACACATGAACAGTTCCTTCATTTCTTAGTAGCTGT...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTAAACTGCTGGCTTACTaGAAAACAGCTACTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CSLARIFFGMYLGERHSLKLLAY*KTATKK Trigger: TTTCTTAGTAGCTGTTTTTCAGTAAGCCAGCAGTTT...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR TCA 90 bp | TTACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATATATTTTCAGCTTCATaGGATGTGTGGCCTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LPRSCFLLSGGNRNTRSYIFSAS*DVWPLF Trigger: GAACAGAGGCCACACATCTCATGAAGCTGAAAATAT...ATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR GCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACTCATTTCTAGAAAACTaGTGGCTTACTGAAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNSFLEN*WLTEKQ Trigger: CTGTTTTTCAGTAAGCCAGCAGTTTTCTAGAAATGA...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR GCA 90 bp | TCTCATAGGACTCCAATGAGAATTCGCTCTGCTAATTCATATACAGAGTTCAGCTTTGACATCATCCTTTaGCTCTATCCACAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: SHRTPMRIRSANSYTEFSFDIIL*LYPQMQ Trigger: CTGCATCTGTGGATAGAGGCAAAGGATGATGTCAAA...GCTGAACTCTGTATATGAATTAGCAGAGCGAATTCTCATTGGAGTCCTATGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTAGTAGTACCTGTCTGTTaGAATAGTAACAACAACAAC | + |
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Preference number: 2 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLVVPVC*NSNNNN Trigger: GTTGTTGTTGTTACTATTCCAACAGACAGGTACTAC...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACTGGGAATGTCAATGATTCATCCAAGTGTCTACATTTAAGTGTTTACGGTTACTGTAGTGGCTaGCAGAGAAAAGTCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: MKTGNVNDSSKCLHLSVYGYCSG*QRKVHL Trigger: CAGGTGGACTTTTCTCTGCCAGCCACTACAGTAACC...GTAAACACTTAAATGTAGACACTTGGATGAATCATTGACATTCCCAGTCTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| 3UTR-3UTR CCA 90 bp | ATAATTTACTGCAGTTCCTCAGCCATTAAGAGGTGGCTAGCCAACTTTCCACTGTTTCTAGAAAACTGCTaGCTTACTGAAAAACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: IIYCSSSAIKRWLANFPLFLENC*LTEKQL Trigger: TAGCTGTTTTTCAGTAAGCCAGCAGTTTTCTAGAAA...CAGTGGAAAGTTGGCTAGCCACCTCTTAATGGCTGAGGAACTGCAGTAAATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTATTTCTAGAAAACTGCTaGCTTACTGAAAAACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLFLENC*LTEKQL Trigger: TAGCTGTTTTTCAGTAAGCCAGCAGTTTTCTAGAAA...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCATCATTTCTAGAAAACTaGTGGCTTACTGAAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: GVCLVHCRMFDIILCLYPSFLEN*WLTEKQ Trigger: CTGTTTTTCAGTAAGCCAGCAGTTTTCTAGAAATGA...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 90 bp | TTTTCCAGCAGGCTGTGGCTAGATTTACCTAGGTCCTGCTTTCTGTaGTCAGGAGGCAACAGAAATACAAGATCATATATATATATATAT | + |
|
Preference number: 2 (lower is better) Translates to: FSSRLWLDLPRSCFL*SGGNRNTRSYIYIY Trigger: ATATATATATATATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAAATCTAGCCACAGCCTGCTGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR TCA 90 bp | GTAGATAGCGATCAACAAATGCTCACAGTTATCAAAGACATTATTTTAACCCACCCAAAGACCCAAATGTaGGTTCTGGCTTTTAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VDSDQQMLTVIKDIILTHPKTQM*VLAFKG Trigger: ACCTTTAAAAGCCAGAACTCACATTTGGGTCTTTGG...GTGGGTTAAAATAATGTCTTTGATAACTGTGAGCATTTGTTGATCGCTATCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCATTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCGTAGTACCTGTCTGTTaGAATAGTAACAACAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: WSFTSVLNRIFHGVENVSVVPVC*NSNNNN Trigger: GTTGTTGTTGTTACTATTCCAACAGACAGGTACTAC...GCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAATGACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR TCA 72 bp | GGAGTCCTGCGGGTGGGCACTGGCCAGTCGGAGTTCTaGAAGTGCTCCAAACATCACAGGCTCCAGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: GVLRVGTGQSEF*KCSKHHRLQHI Trigger: AATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTGCCCACCCGCAGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR GCA 72 bp | GTTGCTCTTCAACTGCTCTGTCGCTGTCCATGCTACTaGAGAGGGATGGGTCTTGTCTCCCTAGCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VALQLLCRCPCY*RGMGLVSLASL Trigger: GAGAGATGCTAGGGAGACAAGACCCATCCCTCTGCAGTAGCATGGACAGCGACAGAGCAGTTGAAGAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | AGTGAAGTTGCTCTTCAACTGCTCTGTCGCTGTCCATaGTACTGCAGAGGGATGGGTCTTGTCTCCCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEVALQLLCRCP*YCRGMGLVSLA Trigger: TGCTAGGGAGACAAGACCCATCCCTCTGCAGTAGCATGGACAGCGACAGAGCAGTTGAAGAGCAACTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CAA 90 bp | TACATGGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTCCAGCGATGCCACCTTaGAGTCAGCCTTCCTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YMDSGDWNLGLHTFLARAPAMPP*SQPSFA Trigger: AGCAAAGGAAGGCTGACTCAAAGGTGGCATCGCTGG...AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | TGGAGCCTGGAATTACACCCACCTGTACATGGATTCTaGAGACTGGAACTTGGGTCTTCACACTTTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WSLELHPPVHGF*RLELGSSHFPG Trigger: GCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCAGGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | GGGTCTTCACACTTTCCTGGCAAGGGCTTTAACCACTaGCTCCATAGCTCCAAAACTTGTCTTCCAACACGC | + |
|
Preference number: 3 (lower is better) Translates to: GSSHFPGKGFNH*LHSSKTCLPTR Trigger: GCGTGTTGGAAGACAAGTTTTGGAGCTATGGAGTCAGTGGTTAAAGCCCTTGCCAGGAAAGTGTGAAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | TGGAATTACACCCACCTGTACATGGATTCTGGAGACTaGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WNYTHLYMDSGD*NLGLHTFLARA Trigger: AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTAATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | CACTCTACCTCTGCTCCCAAATCTATTGGCTGCATTTaGAACACACAGAAGGCCATAGGCTTGGCTAGTACG | + |
|
Preference number: 3 (lower is better) Translates to: HSTSAPKSIGCI*NTQKAIGLAST Trigger: CGTACTAGCCAAGCCTATGGCCTTCTGTGTGTTCCAAATGCAGCCAATAGATTTGGGAGCAGAGGTAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | AGAGATGGGAGGATCTCTGAGAGTTCAAGGACAGCCTaGTCTACATTCCAAGACAGCCAGGACTACATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RDGRISESSRTA*STFQDSQDYIE Trigger: CTCTATGTAGTCCTGGCTGTCTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATCTGAATTCCTCAAATTaGCATGCCAACCAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHLNSSN*HANQIF Trigger: GAAGATCTGGTTGGCATGCAAATTTGAGGAATTCAG...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGACAGAGAGCCTAGGATCACTCTACCTCTGCTCCCAAATCTATTGGCTGCCAACTTTGGAAAAGTaGGGGCAGGAAGAATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DKTESLGSLYLCSQIYWLPTLEK*GQEECH Trigger: GTGACATTCTTCCTGCCCCAACTTTTCCAAAGTTGG...CAGCCAATAGATTTGGGAGCAGAGGTAGAGTGATCCTAGGCTCTCTGTCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | AGAAAGGACCAGCCAGTTCTCAGACCACTTCCCAACTaGTGCAGTCTAGCTAGGATCTTCTTTGGGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RKDQPVLRPLPN*CSLARIFFGMY Trigger: ATACATCCCAAAGAAGATCCTAGCTAGACTGCAGCAGTTGGGAAGTGGTCTGAGAACTGGCTGGTCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | TTGCTGATAAATGCTTCAGTGAAGTTGCTCTTCAACTaGTCTGTCGCTGTCCATGCTACTGCAGAGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLINASVKLLFN*SVAVHATAEGW Trigger: CCATCCCTCTGCAGTAGCATGGACAGCGACAGAGCAGTTGAAGAGCAACTTCACTGAAGCATTTATCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | AGCCTAGGATCACTCTACCTCTGCTCCCAAATCTATTaGCTGCATTTGGAACACACAGAAGGCCATAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLGSLYLCSQIY*LHLEHTEGHRL Trigger: AAGCCTATGGCCTTCTGTGTGTTCCAAATGCAGCCAATAGATTTGGGAGCAGAGGTAGAGTGATCCTAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CAA 90 bp | GTCATTAGTGACCCATTAAGCATCTGCCCTAGGCACCATGGAGGTGGGATTCTCCTGAATTCCTCAAATTaGCATGCCAACCAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VISDPLSICPRHHGGGILLNSSN*HANQIF Trigger: GAAGATCTGGTTGGCATGCAAATTTGAGGAATTCAG...GAGAATCCCACCTCCATGGTGCCTAGGGCAGATGCTTAATGGGTCACTAATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGACAGAGAGCCTAGGATCACTCTACCTCTGCTCCCAAATCTATTGGCTGCCCATGAAGGGATTATaGGTCATTCACATCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DKTESLGSLYLCSQIYWLPMKGL*VIHISS Trigger: AGAACTGATGTGAATGACCAATAATCCCTTCATGGG...CAGCCAATAGATTTGGGAGCAGAGGTAGAGTGATCCTAGGCTCTCTGTCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | GTGGTTACTGTAGTGGCTGGCAGAGAAAAGTCCACCTaGATTCCTCAAATTTGCATGCCAACCAGATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVTVVAGREKST*IPQICMPTRSS Trigger: GGAAGATCTGGTTGGCATGCAAATTTGAGGAATTCAGGTGGACTTTTCTCTGCCAGCCACTACAGTAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR TCA 72 bp | CTAGATCCACCTAATTCTGTACACTCCATGATTTACTaGCCTCTGTCCCAGCTCCTGCTTTCTGTTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LDPPNSVHSMIY*PLSQLLLSVVR Trigger: CCTGACAACAGAAAGCAGGAGCTGGGACAGAGGTCAGTAAATCATGGAGTGTACAGAATTAGGTGGATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | AGGTGGTCTGTACTGGATTGTTGTACCATATATCATTaGCACGGAGAGAGACAGCGCAAGAGTTCCAGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: RWSVLDCCTIYH*HGERQRKSSSD Trigger: ATCGCTGGAACTCTTGCGCTGTCTCTCTCCGTGTCAATGATATATGGTACAACAATCCAGTACAGACCACCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | CCACCTTTCCTCATTACGGAGAATGCTCCAGCCTATTaGAAGAAGGACGATGCAGAGAAATACACAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PPFLITENAPAY*KKDDAEKYTEL Trigger: GAGCTCTGTGTATTTCTCTGCATCGTCCTTCTTTCAATAGGCTGGAGCATTCTCCGTAATGAGGAAAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | TTTTCCAGCAGGCTGTGGCTAGATTTACCTAGGTCCTaGTTTCTGTTGTCAGGAGGCAACAGAAATACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSSRLWLDLPRS*FLLSGGNRNTR Trigger: TCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAAATCTAGCCACAGCCTGCTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | TCCATAATTTACTGCAGTTCCTCAGCCATTAAGAGGTaGCTAGCCAACTTTCCACTGGCCATACAGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SIIYCSSSAIKR*LANFPLAIQSS Trigger: AGAAGACTGTATGGCCAGTGGAAAGTTGGCTAGCCACCTCTTAATGGCTGAGGAACTGCAGTAAATTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | TACGTGGGAGAGAGAATGCAAACAGAGGTTCAACATTaGTGTCCGGAATCATGTTGTTACTCTTCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YVGERMQTEVQH*CPESCCYSSTL Trigger: CAAGGTGGAAGAGTAACAACATGATTCCGGACATCAATGTTGAACCTCTGTTTGCATTCTCTCTCCCACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | CATCTTCAAAAGATTGCAAAGGTTCTAGGTTCTCCTTaGGGTTACTCAAGGGTGAGAAAGGACCAGCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLQKIAKVLGSP*GYSRVRKDQPV Trigger: AACTGGCTGGTCCTTTCTCACCCTTGAGTAACCTCAAGGAGAACCTAGAACCTTTGCAATCTTTTGAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | TGCAGAGGGATGGGTCTTGTCTCCCTAGCATCTCTCTaGAGATACCATCTTCAAAAGATTGCAAAGGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CRGMGLVSLASL*RYHLQKIAKVL Trigger: TAGAACCTTTGCAATCTTTTGAAGATGGTATCTTCAGAGAGATGCTAGGGAGACAAGACCCATCCCTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CCA 72 bp | TGGTCATGCACACAAACACACACAGGTGGTCTGTACTaGATTGTTGTACCATATATCATTGACACGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WSCTQTHTGGLY*IVVPYIIDTER Trigger: TCTCTCCGTGTCAATGATATATGGTACAACAATCCAGTACAGACCACCTGTGTGTGTTTGTGTGCATGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTATACACTGTAGGATGTTaGACATCATCCTTTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLYTVGC*TSSFAS Trigger: AGAGGCAAAGGATGATGTCAAACATCCTACAGTGTA...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGCCTGACAGAGTCTATTCTCTCCTTCCATCATGTGAAACCCTTGGATTGGAATCTTCCATGGTGTaGAAAATGTTAGCTGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RQPDRVYSLLPSCETLGLESSMV*KMLAVV Trigger: CACTACAGCTAACATTTTCAACACCATGGAAGATTC...CAATCCAAGGGTTTCACATGATGGAAGGAGAGAATAGACTCTGTCAGGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | TCCGGAATCATGTTGTTACTCTTCCACCTTGTGCATTaGAGCAAGGTCTCTCAATCAAATCCAGAACTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGIMLLLFHLVH*SKVSQSNPELS Trigger: AGAGAGTTCTGGATTTGATTGAGAGACCTTGCTTCAATGCACAAGGTGGAAGAGTAACAACATGATTCCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | TTGAAAATGTTAGCTGTAGTGAGGCTCACTAGCCAATaGAGACTGGGAATGTCAATGATTCATCCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKMLAVVRLTSQ*RLGMSMIHPSV Trigger: GACACTTGGATGAATCATTGACATTCCCAGTCTTCATTGGCTAGTGAGCCTCACTACAGCTAACATTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR TCA 72 bp | ACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATaGAGGGATTATTGGTCATTCACATCAGTTCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TKLCPIFLGVTP*RDYWSFTSVLN Trigger: GTTTAGAACTGATGTGAATGACCAATAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR GCA 72 bp | CCTAGCATCTCTCTGAAGATACCATCTTCAAAAGATTaGAAAGGTTCTAGGTTCTCCTTGAGGTTACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSISLKIPSSKD*KGSRFSLRLLK Trigger: CTTGAGTAACCTCAAGGAGAACCTAGAACCTTTGCAATCTTTTGAAGATGGTATCTTCAGAGAGATGCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | CACTCAAATGCATCAGTGATACTGTTAGTTACCTACTaGTCATTCTGCCCAAAGCACAATAAAGGTAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSNASVILLVTY*SFCPKHNKGRS Trigger: ACTCCTACCTTTATTGTGCTTTGGGCAGAATGATCAGTAGGTAACTAACAGTATCACTGATGCATTTGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | TGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTaGCTCTATCCACAGATGCAGTTGATAGTAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: CLVHCRMFDIIL*LYPQMQLIVVP Trigger: AGGTACTACTATCAACTGCATCTGTGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTACCACACGTTGCTATTTAACGTTGATATTTAAACGGCCATGTCTCATTTACACTGTAGGATGTTaGACATCATCCTTTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFTTRCYLTLIFKRPCLIYTVGC*TSSFAS Trigger: AGAGGCAAAGGATGATGTCAAACATCCTACAGTGTA...AATGAGACATGGCCGTTTAAATATCAACGTTAAATAGCAACGTGTGGTAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR-3UTR CAA 90 bp | TTACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATATTTTGGCACCATATTaGATAGGTAGAAAGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LPRSCFLLSGGNRNTRSYILAPY*IGRKTP Trigger: TGGTGTCTTTCTACCTATCAAATATGGTGCCAAAAT...ATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR TCA 72 bp | TCAGTACATAACAGATCTCATCTCATAGGACTCCAATaGGAATTCGCTCTGCTAATTCATATACAGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVHNRSHLIGLQ*EFALLIHIQSS Trigger: TGAACTCTGTATATGAATTAGCAGAGCGAATTCTCATTGGAGTCCTATGAGATGAGATCTGTTATGTACTGA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR GCA 72 bp | CTCTTCATTTCAGCTTGTGTGAGCTGGATTCTTGTTTaGAACCAAAAGGATTCCAGGAAACAAAAAGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: LFISACVSWILV*NQKDSRKQKVY Trigger: ATATACTTTTTGTTTCCTGGAATCCTTTTGGTTGCAAACAAGAATCCAGCTCACACAAGCTGAAATGAAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | GCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATTCACAACCACGGCCTTGATCTaGCGCCTTCTGCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSESAPNITGSSTFTTTALI*RLLLLQ Trigger: CTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGT...TGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | GTCATTAGTGACCCATTAAGCATCTGCCCTAGGCACCATGGAGGTGGGATTCTCAGGTGTCACTTCTGCTaGCTCCTGCCTCACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VISDPLSICPRHHGGGILRCHFC*LLPHLA Trigger: AGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCT...GAGAATCCCACCTCCATGGTGCCTAGGGCAGATGCTTAATGGGTCACTAATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATGCTTTGTGCTCTGCTTaGAGGTTTTCCCGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHALCSA*RFSRTR Trigger: ACGAGTGCGGGAAAACCTTCAAGCAGAGCACAAAGC...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | TACATGGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTACTCCTGCCTCACCTTaGTGGGGGTCTCCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YMDSGDWNLGLHTFLARATPASP*WGSPGT Trigger: TGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGT...AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATCCCTGTCTTCTTCCCTaGAGAGGTGTCACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHPCLLP*RGVTSA Trigger: AGCAGAAGTGACACCTCTGCAGGGAAGAAGACAGGG...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATGGCAGGCTTGCGCTTTaGATTTGTGGAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHGRLAL*ICGTAP Trigger: AGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCC...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | GCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATTCACAGCTTTGTGCTCTGCTTaGAGGTTTTCCCGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSESAPNITGSSTFTALCSA*RFSRTR Trigger: ACGAGTGCGGGAAAACCTTCAAGCAGAGCACAAAGC...TGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACACCACGGCCTTGATCTaGCGCCTTCTGCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNTTALI*RLLLLQ Trigger: CTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGT...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CCA 90 bp | TCAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTCCTGCCTCACCTTGCTaGGGGTCTCCAGGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSCVLFSLESPHEGIPASPC*GSPGTS Trigger: CGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGG...AATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GTCATTAGTGACCCATTAAGCATCTGCCCTAGGCACCATGGAGGTGGGATTCTCTCATGTTCCACGAGGTaGAGGGTCTGGTTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VISDPLSICPRHHGGGILSCSTR*RVWLKV Trigger: AACCTTCAACCAGACCCTCCACCTCGTGGAACATGA...GAGAATCCCACCTCCATGGTGCCTAGGGCAGATGCTTAATGGGTCACTAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CAA 72 bp | ATTGGCTGCATTTGGAACACACAGAAGGCCATAGGCTaGGCTAGTACGGTGGGGCAAGCCACCATATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGCIWNTQKAIG*ASTVGQATIYL Trigger: CAGATATATGGTGGCTTGCCCCACCGTACTAGCCAAGCCTATGGCCTTCTGTGTGTTCCAAATGCAGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTAACTCCTGCCTCACCTTaGTGGGGGTCTCCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLTPASP*WGSPGT Trigger: TGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGT...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTAACTTCTGCTGACTCCTaGCTCACCTTGCTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLTSADS*LTLLGV Trigger: GACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGT...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | TACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATACGGGCCCCAGGCACATaGATCTGCTTGTGCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLGPAFCCQEATEIQDHIRAPGT*ICLCSV Trigger: GACGGAGCACAAGCAGATCCATGTGCCTGGGGCCCG...TATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CAA 72 bp | TACACCCACCTGTACATGGATTCTGGAGACTGGAACTaGGGTCTTCACACTTTCCTGGCAAGGGCTTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: YTHLYMDSGDWN*GLHTFLARALT Trigger: GGTTAAAGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTACAGGTGGGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATCTTCTGCTTCTCCAGTaGTGTTGTCTTAGAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHLLLLQ*CCLRIV Trigger: GACAATTCTAAGACAACATCACTGGAGAAGCAGAAG...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTGCAGGCTCCAGTAGCTaGCACTCTTTCTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLARIFFGMYLGERHSLAGSSS*HSFWLK Trigger: CTTCAGCCAGAAAGAGTGGCAGCTACTGGAGCCTGC...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAGGTTTCTCCCCAGCGTaGAGCCTCTCATGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPGFSPA*SLSCLW Trigger: CCAAAGGCATGAGAGGCTGCACGCTGGGGAGAAACC...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GCAGAGATGGGAGGATCTCTGAGAGTTCAAGGACAGCCTGGTCTACATTCCAAGACCCGAAGATGTGCCTaGAATTGCAGATTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AEMGGSLRVQGQPGLHSKTRRCA*NCRFIL Trigger: GAGAATGAATCTGCAATTCCAGGCACATCTTCGGGT...CTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACACGAGGTGGAGGGTCTaGTTGAAGGTTTTCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNTRWRV*LKVFPH Trigger: ATGCGGGAAAACCTTCAACCAGACCCTCCACCTCGT...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATAGGTGTCACTTCTGCTaGCTCCTGCCTCACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHRCHFC*LLPHLA Trigger: AGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCT...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATGGTGGAGGGTCTGGTTaGAGGTTTTCCCGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHGGGSG*RFSRIP Trigger: AGGAATGCGGGAAAACCTTCAACCAGACCCTCCACC...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGGGTGGAGGGTCTGGTTaGAGGTTTTCCCGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEGGGSG*RFSRIP Trigger: AGGAATGCGGGAAAACCTTCAACCAGACCCTCCACC...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAGCAGGCTCCAGTAGCTaGCACTCTTTCTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPAGSSS*HSFWLK Trigger: CTTCAGCCAGAAAGAGTGGCAGCTACTGGAGCCTGC...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACACGAGGTGGAGGGTCTaGTTGAAGGTTTTCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAPNITGSSTFTNLTKCYTRWRV*LKVFPH Trigger: ATGCGGGAAAACCTTCAACCAGACCCTCCACCTCGT...GTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GTGTTTACCACACGTTGCTATTTAACGTTGATATTTAAACGGCCATGTCTCATTCGGGCCCCAGGCACATaGATCTGCTTGTGCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFTTRCYLTLIFKRPCLIRAPGT*ICLCSV Trigger: GACGGAGCACAAGCAGATCCATGTGCCTGGGGCCCG...AATGAGACATGGCCGTTTAAATATCAACGTTAAATAGCAACGTGTGGTAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACGCCTCGTGTCTCTTCTaGTGCTTGAGAAGGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SAPNITGSSTFTNLTKCYASCLF*CLRRAT Trigger: AGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGC...GTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACAAAGGGTTTCTCCCCTaGGTGGATCCTGCAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SAPNITGSSTFTNLTKCYKGFLP*VDPAVI Trigger: AATCACTGCAGGATCCACTCAGGGGAGAAACCCTTT...GTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTAAAGGGTTTCTCCCCTaGGTGGATCCTGCAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSCVLFSLESPHEGIKGFLP*VDPAVI Trigger: AATCACTGCAGGATCCACTCAGGGGAGAAACCCTTT...AATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATAGATGTGCCTGGAATTaGAGATTCATTCTCCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHRCAWN*RFILLI Trigger: AATAAGGAGAATGAATCTGCAATTCCAGGCACATCT...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GCAGAGATGGGAGGATCTCTGAGAGTTCAAGGACAGCCTGGTCTACATTCCAAGGAACATCGTTCTCTTTaGCAAAAAGGTCAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEMGGSLRVQGQPGLHSKEHRSL*QKGQLL Trigger: AAGGAGTTGACCTTTTTGCCAAAGAGAACGATGTTC...CTTGGAATGTAGACCAGGCTGTCCTTGAACTCTCAGAGATCCTCCCATCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CCA 90 bp | TACATGGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTGGATTTCTGCCTTTGTaGAATTATCCCCTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YMDSGDWNLGLHTFLARAGFLPL*NYPLSS Trigger: AGAAGACAGGGGATAATTCCACAAAGGCAGAAATCC...AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAGGCAGGCTTGCGCTTTaGATTTGTGGAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPGRLAL*ICGTAP Trigger: AGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCC...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGGCCTCGTGTCTCTTCTaGTGCTTGAGAAGGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEASCLF*CLRRAT Trigger: AGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGC...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | CCATGGAGGTGGGATTCTCAATCCATTCCAGCTCATTaGGCATTCAGAGTTGGCCAACCAATGTTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PWRWDSQSIPAH*AFRVGQPMFSI Trigger: GATGGAAAACATTGGTTGGCCAACTCTGAATGCCAAATGAGCTGGAATGGATTGAGAATCCCACCTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CAA 72 bp | GCACACAAACACACACAGGTGGTCTGTACTGGATTGTaGTACCATATATCATTGACACGGAGAGAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHKHTQVVCTGL*YHISLTRRETA Trigger: CGCTGTCTCTCTCCGTGTCAATGATATATGGTACAACAATCCAGTACAGACCACCTGTGTGTGTTTGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| 3UTR CAA 72 bp | GCCACCTTTCCTCATTACGGAGAATGCTCCAGCCTATaGAAAGAAGGACGATGCAGAGAAATACACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATFPHYGECSSL*KEGRCREIHRA Trigger: AGCTCTGTGTATTTCTCTGCATCGTCCTTCTTTCAATAGGCTGGAGCATTCTCCGTAATGAGGAAAGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAAGCTGGTTTGCTGTCTaGTCAGGACTTGGTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPSWFAV*SGLGEG Trigger: ACCTTCACCAAGTCCTGATCAGACAGCAAACCAGCT...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | GACAAGACAGAGAGCCTAGGATCACTCTACCTCTGCTCCCAAATCTATTGGCTGTTCTGTAGTCGAAGTTaGGGCACATTTCTCCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: DKTESLGSLYLCSQIYWLFCSRS*GTFLLI Trigger: AATAAGGAGAAATGTGCCTCAACTTCGACTACAGAA...CAGCCAATAGATTTGGGAGCAGAGGTAGAGTGATCCTAGGCTCTCTGTCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | GTGTTTACCACACGTTGCTATTTAACGTTGATATTTAAACGGCCATGTCTCATTGGTTTCTCCCCAGCGTaGAGCCTCTCATGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFTTRCYLTLIFKRPCLIGFSPA*SLSCLW Trigger: CCAAAGGCATGAGAGGCTGCACGCTGGGGAGAAACC...AATGAGACATGGCCGTTTAAATATCAACGTTAAATAGCAACGTGTGGTAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GTAGATAGCGATCAACAAATGCTCACAGTTATCAAAGACATTATTTTAACCCACCCTGCCTCACCTTGCTaGGGGTCTCCAGGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: VDSDQQMLTVIKDIILTHPASPC*GSPGTS Trigger: CGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGG...GTGGGTTAAAATAATGTCTTTGATAACTGTGAGCATTTGTTGATCGCTATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | TCAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTTGGAACTGCTCCTCATaGTCTGTGGTTTTCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSCVLFSLESPHEGIWNCSS*SVVFPQ Trigger: TTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCA...AATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTTGCTTGACTTACATCTaGAAGTCTTTCCACACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLARIFFGMYLGERHSLCLTYI*KSFHTP Trigger: AGGGGTGTGGAAAGACTTTCAGATGTAAGTCAAGCA...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | TTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCTGTAGTACTTCTGCTGACTCCTaGCTCACCTTGCTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLNRIFHGVENVSCSTSADS*LTLLGV Trigger: GACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGT...ACTACAGCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGTCGTGTCTCTTCTGGTaGTTGAGAAGGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCESCLFW*LRRATL Trigger: CAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGA...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTAGCTCCTCATGGTCTGTaGTTTTCCCTCAACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFHKAVSYFPWSHPMKGLAPHGL*FSLNIF Trigger: AAAGATGTTGAGGGAAAACCACAGACCATGAGGAGC...TAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGCCTTTGTCACACTTGTaGCACACGAAAGGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEPLSHL*HTKGFS Trigger: GGAGAAACCTTTCGTGTGCCACAAGTGTGACAAAGG...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | CATGCACACAAACACACACAGGTGGTCTGTACTGGATaGTTGTACCATATATCATTGACACGGAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HAHKHTQVVCTG*LYHISLTRRET Trigger: TGTCTCTCTCCGTGTCAATGATATATGGTACAACAATCCAGTACAGACCACCTGTGTGTGTTTGTGTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | TTACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATGCCACTCTTTCTGGCTaGAGTACACAGCTACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPRSCFLLSGGNRNTRSYATLSG*STQLHL Trigger: AAGATGTAGCTGTGTACTTCAGCCAGAAAGAGTGGC...ATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGAAAAGGTCAACTCCTTaGTCCAACCTGGTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEKRSTP*SNLVIN Trigger: GTTGATCACCAGGTTGGAGCAAGGAGTTGACCTTTT...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | TGGTCATTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCCCCTGTCTTCTTCCCTaGAGAGGTGTCACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSFTSVLNRIFHGVENVSPCLLP*RGVTSA Trigger: AGCAGAAGTGACACCTCTGCAGGGAAGAAGACAGGG...GCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAATGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTATTCATTCTCCTTATTaGCCGGTATGCTGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLARIFFGMYLGERHSLIHSPY*PVCWFC Trigger: GCAAAACCAGCATACCGGGCAATAAGGAGAATGAAT...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTATTCATTCTCCTTATTaGCCGGTATGCTGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSCVLFSLESPHEGIIHSPY*PVCWFC Trigger: GCAAAACCAGCATACCGGGCAATAAGGAGAATGAAT...AATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGGCTCCTCATGGTCTGTaGTTTTCCCTCAACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEAPHGL*FSLNIF Trigger: AAAGATGTTGAGGGAAAACCACAGACCATGAGGAGC...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACTCCTTGCATTTAAAGTaGTTTTTACCTTGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNSLHLK*FLPCRA Trigger: TGCCCGACAAGGTAAAAACCACTTTAAATGCAAGGA...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CCA 90 bp | TCTCATAGGACTCCAATGAGAATTCGCTCTGCTAATTCATATACAGAGTTCAGCCCTTTGTCACACTTGTaGCACACGAAAGGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHRTPMRIRSANSYTEFSPLSHL*HTKGFS Trigger: GGAGAAACCTTTCGTGTGCCACAAGTGTGACAAAGG...GCTGAACTCTGTATATGAATTAGCAGAGCGAATTCTCATTGGAGTCCTATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTCACAAAGCTGTGTCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTCATTTCTCCTTATTTTaGGATGGCCTGTCATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSCVLFSLESPHEGIHFSLF*DGLSSL Trigger: AAGTGATGACAGGCCATCTCAAAATAAGGAGAAATG...AATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GTGTTTACCACACGTTGCTATTTAACGTTGATATTTAAACGGCCATGTCTCATTTCATGTTCCACGAGGTaGAGGGTCTGGTTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFTTRCYLTLIFKRPCLISCSTR*RVWLKV Trigger: AACCTTCAACCAGACCCTCCACCTCGTGGAACATGA...AATGAGACATGGCCGTTTAAATATCAACGTTAAATAGCAACGTGTGGTAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | AGGCTGTGGCTAGATTTACCTAGGTCCTGCTTTCTGTaGTCAGGAGGCAACAGAAATACAAGATCATATATA | + |
|
Preference number: 4 (lower is better) Translates to: RLWLDLPRSCFL*SGGNRNTRSYI Trigger: TATATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTAAATCTAGCCACAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | TGGTCATTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCGCCACTCTTTCTGGCTaGAGTACACAGCTACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSFTSVLNRIFHGVENVSATLSG*STQLHL Trigger: AAGATGTAGCTGTGTACTTCAGCCAGAAAGAGTGGC...GCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAATGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TACCTAGGTCCTGCTTTCTGTTGTCAGGAGGCAACAGAAATACAAGATCATATACCTGTCATCACTTTTTaGGGTCTTTTCTGCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLGPAFCCQEATEIQDHIPVITF*GLFCSQ Trigger: TTGAGAGCAGAAAAGACCTCAAAAAGTGATGACAGG...TATATGATCTTGTATTTCTGTTGCCTCCTGACAACAGAAAGCAGGACCTAGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATCATTTCTCCTTATTTTaGGATGGCCTGTCATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHHFSLF*DGLSSL Trigger: AAGTGATGACAGGCCATCTCAAAATAAGGAGAAATG...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATTTCTGTAGTCGAAGTTaGGGCACATTTCTCCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHFCSRS*GTFLLI Trigger: AATAAGGAGAAATGTGCCTCAACTTCGACTACAGAA...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCATCCTTGCATTTAAAGTaGTTTTTACCTTGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPSLHLK*FLPCRA Trigger: TGCCCGACAAGGTAAAAACCACTTTAAATGCAAGGA...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | GGAGTCTGTTTAGTACACTGTAGGATGTTTGACATCATCCTTTGCCTCTATCCAAGATGTGCCTGGAATTaGAGATTCATTCTCCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLVHCRMFDIILCLYPRCAWN*RFILLI Trigger: AATAAGGAGAATGAATCTGCAATTCCAGGCACATCT...TGGATAGAGGCAAAGGATGATGTCAAACATCCTACAGTGTACTAAACAGACTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR GCA 90 bp | TTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCTGTAGTTCGTGTCTCTTCTGGTaGTTGAGAAGGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLNRIFHGVENVSCSSCLFW*LRRATL Trigger: CAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGA...ACTACAGCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | ACTGTTCATGTGTGTCTCGTTTCTCTTGTTTTGACTTaGTCCCAAAGACCCAAATGTGAGTTCTGGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TVHVCLVSLVLT*SQRPKCEFWLL Trigger: TAAAAGCCAGAACTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATGAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | TTTGACATCATCCTTTGCCTCTATCCACAGATGCAGTaGATAGTAGTACCTGTCTGTTGGAATAGTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FDIILCLYPQMQ*IVVPVCWNSNN Trigger: GTTGTTACTATTCCAACAGACAGGTACTACTATCAACTGCATCTGTGGATAGAGGCAAAGGATGATGTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | TCCTATTTTCCTTGGAGTCACCCCATGAAGGGATTATaGGTCATTCACATCAGTTCTAAACAGAATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYFPWSHPMKGL*VIHISSKQNLP Trigger: TGGAAGATTCTGTTTAGAACTGATGTGAATGACCAATAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | ATAGATTCAGTTTCACAAAGCTGTGTCCTATTTTCCTaGGAGTCACCCCATGAAGGGATTATTGGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IDSVSQSCVLFS*ESPHEGIIGHS Trigger: TGAATGACCAATAATCCCTTCATGGGGTGACTCCAAGGAAAATAGGACACAGCTTTGTGAAACTGAATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | TGGTCATTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCCCTGTCATCACTTTTTaGGGTCTTTTCTGCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WSFTSVLNRIFHGVENVSPVITF*GLFCSQ Trigger: TTGAGAGCAGAAAAGACCTCAAAAAGTGATGACAGG...GCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAATGACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR TCA 90 bp | ATGAAGACTGGGAATGTCAATGATTCATCCAAGTGTCTACATTTAAGTGTTTACTGCTTGACTTACATCTaGAAGTCTTTCCACACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTGNVNDSSKCLHLSVYCLTYI*KSFHTP Trigger: AGGGGTGTGGAAAGACTTTCAGATGTAAGTCAAGCA...GTAAACACTTAAATGTAGACACTTGGATGAATCATTGACATTCCCAGTCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | ATGAAGACTGGGAATGTCAATGATTCATCCAAGTGTCTACATTTAAGTGTTTACACCCGAAGATGTGCCTaGAATTGCAGATTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MKTGNVNDSSKCLHLSVYTRRCA*NCRFIL Trigger: GAGAATGAATCTGCAATTCCAGGCACATCTTCGGGT...GTAAACACTTAAATGTAGACACTTGGATGAATCATTGACATTCCCAGTCTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | GCTCTTCATTTCAGCTTGTGTGAGCTGGATTCTTGTTaGCAACCAAAAGGATTCCAGGAAACAAAAAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ALHFSLCELDSC*QPKGFQETKSI Trigger: TATACTTTTTGTTTCCTGGAATCCTTTTGGTTGCAAACAAGAATCCAGCTCACACAAGCTGAAATGAAGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR TCA 90 bp | ATGAAGACTGGGAATGTCAATGATTCATCCAAGTGTCTACATTTAAGTGTTTACCTTCTGCTTCTCCAGTaGTGTTGTCTTAGAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MKTGNVNDSSKCLHLSVYLLLLQ*CCLRIV Trigger: GACAATTCTAAGACAACATCACTGGAGAAGCAGAAG...GTAAACACTTAAATGTAGACACTTGGATGAATCATTGACATTCCCAGTCTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CCA 90 bp | TTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCTGTAGTGAACATCGTTCTCTTTaGCAAAAAGGTCAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLNRIFHGVENVSCSEHRSL*QKGQLL Trigger: AAGGAGTTGACCTTTTTGCCAAAGAGAACGATGTTC...ACTACAGCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| 3UTR CAA 72 bp | TCATTCTGCCCAAAGCACAATAAAGGTAGGAGTCCTTaGGGAAGAATAAGAATAGGAATAATCAAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFCPKHNKGRSP*GRIRIGIIKEE Trigger: TTCTTCTTTGATTATTCCTATTCTTATTCTTCCCAAAGGACTCCTACCTTTATTGTGCTTTGGGCAGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS GCA 90 bp | CACTCCGGGCAGTCCACTCGGGCCCCAGGCACATGGATCTGCTTGTaGTCCGTCAAGTACGAGCTGTTTCGGAAGTGTTTTCCGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSGQSTRAPGTWICL*SVKYELFRKCFPHL Trigger: CAAGTGCGGAAAACACTTCCGAAACAGCTCGTACTTGACGGAGCACAAGCAGATCCATGTGCCTGGGGCCCGAGTGGACTGCCCGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS CCA 90 bp | CCACACCCCTTGCACCGGTACCTGGAGTTTGCCTCGTGTCTCTTCTaGTGCTTGAGAAGGGCTACTTTGCAAGCGAAGACTTTCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PHPLHRYLEFASCLF*CLRRATLQAKTFPH Trigger: GTGTGGGAAAGTCTTCGCTTGCAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGCAAACTCCAGGTACCGGTGCAAGGGGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS TCA 90 bp | GTAGGGTCTCACTCCCGTGTGAATTCGGTAGTGTGTGAGGAAGTATaGGAGGTGCCGGAAAGATTTGCCGCACGTGTCACACTTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSHSRVNSVVCEEV*EVPERFAARVTLVG Trigger: CCCCACAAGTGTGACACGTGCGGCAAATCTTTCCGGCACCTCTCATACTTCCTCACACACTACCGAATTCACACGGGAGTGAGACCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS TCA 90 bp | CCCCAGCGTGCAGCCTCTCATGCCTTTGGATGCTTGACTTACATCTaGAAGTCTTTCCACACCCCTTGCACCGGTACCTGGAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQRAASHAFGCLTYI*KSFHTPCTGTWSLP Trigger: AGGCAAACTCCAGGTACCGGTGCAAGGGGTGTGGAAAGACTTTCAGATGTAAGTCAAGCATCCAAAGGCATGAGAGGCTGCACGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS GCA 90 bp | CTTCCGGATTTCTGCCTTTGTGGAATTATCCCCTGTCTTCTTCCCTaGAGAGGTGTCACTTCTGCTGACTCCTGCCTCACCTTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPDFCLCGIIPCLLP*RGVTSADSCLTLLG Trigger: CCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCTCTGCAGGGAAGAAGACAGGGGATAATTCCACAAAGGCAGAAATCCGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS GCA 90 bp | TTCTTCCCTGCAGAGGTGTCACTTCTGCTGACTCCTGCCTCACCTTaGTGGGGGTCTCCAGGAACATCGTTCTCTTTGGCAAAAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FFPAEVSLLLTPASP*WGSPGTSFSLAKRS Trigger: TGACCTTTTTGCCAAAGAGAACGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCTCTGCAGGGAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS CCA 90 bp | TTCCCTGCAGAGGTGTCACTTCTGCTGACTCCTGCCTCACCTTGCTaGGGGTCTCCAGGAACATCGTTCTCTTTGGCAAAAAGGTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: FPAEVSLLLTPASPC*GSPGTSFSLAKRST Trigger: AGTTGACCTTTTTGCCAAAGAGAACGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCTCTGCAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATAGCTTTGTGCTCTGCTaGAAGGTTTTCCCGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHSFVLC*KVFPHS Trigger: CGAGTGCGGGAAAACCTTCAAGCAGAGCACAAAGCT...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS TCA 90 bp | CCGCACTTGTCACACTTGTACGGCTTCACCTTTAAATGGAGCCGCTaGTGCTCCGAAAGATGTGAGTTGACCCTGAAGGTCTTCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PHLSHLYGFTFKWSR*CSERCELTLKVFPH Trigger: GTGTGGGAAGACCTTCAGGGTCAACTCACATCTTTCGGAGCATCAGCGGCTCCATTTAAAGGTGAAGCCGTACAAGTGTGACAAGTGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS GCA 90 bp | ACATCTGAAAGTCTTTCCACACCCCTTGCACCGGTACCTGGAGTTTaGCTCGTGTCTCTTCTGGTGCTTGAGAAGGGCTACTTTGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSESLSTPLAPVPGV*LVSLLVLEKGYFAS Trigger: GCTTGCAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGCAAACTCCAGGTACCGGTGCAAGGGGTGTGGAAAGACTTTCAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS-3UTR CAA 90 bp | TACATGGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTAGGTGGAGGGTCTGGTaGAAGGTTTTCCCGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: YMDSGDWNLGLHTFLARARWRVW*KVFPHS Trigger: GGAATGCGGGAAAACCTTCAACCAGACCCTCCACCT...AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS TCA 90 bp | ACTCTGGGAACCACGGCCTTGATCTGCCGCCTTCTGCTTCTCCAGTaGTGTTGTCTTAGAATTGTCTGGCTTCCGGATTTCTGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLGTTALICRLLLLQ*CCLRIVWLPDFCLC Trigger: ACAAAGGCAGAAATCCGGAAGCCAGACAATTCTAAGACAACATCACTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGTTCCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATTTTCAGAGAGCTGGTTaGCTGTCTGATCAGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHFQRAG*LSDQDL Trigger: CAAGTCCTGATCAGACAGCAAACCAGCTCTCTGAAA...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CAA 90 bp | GCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATTCACAAAAAAGGTCAACTCCTaGCTCCAACCTGGTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASRSSESAPNITGSSTFTKKVNS*LQPGDQ Trigger: TTGATCACCAGGTTGGAGCAAGGAGTTGACCTTTTT...TGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
||
| CDS-3UTR CAA 90 bp | GTCATTAGTGACCCATTAAGCATCTGCCCTAGGCACCATGGAGGTGGGATTCTCGGAACATCGTTCTCTTaGGCAAAAAGGTCAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VISDPLSICPRHHGGGILGTSFS*AKRSTP Trigger: AGGAGTTGACCTTTTTGCCAAAGAGAACGATGTTCC...GAGAATCCCACCTCCATGGTGCCTAGGGCAGATGCTTAATGGGTCACTAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
||
| CDS-3UTR CAA 90 bp | TACATGGATTCTGGAGACTGGAACTTGGGTCTTCACACTTTCCTGGCAAGGGCTAAGTGTTTTCCGCACTaGTCACACTTGTACGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YMDSGDWNLGLHTFLARAKCFPH*SHLYGF Trigger: GAAGCCGTACAAGTGTGACAAGTGCGGAAAACACTT...AGCCCTTGCCAGGAAAGTGTGAAGACCCAAGTTCCAGTCTCCAGAATCCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| CDS TCA 90 bp | CTTTTTGAGGTCTTTTCTGCTCTCAAACTCTGGGAACCACGGCCTTaGTCTGCCGCCTTCTGCTTCTCCAGTGATGTTGTCTTAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LFEVFSALKLWEPRP*SAAFCFSSDVVLEL Trigger: CAATTCTAAGACAACATCACTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGTTCCCAGAGTTTGAGAGCAGAAAAGACCTCAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 90 bp | CTTGCATTTAAAGTGGTTTTTACCTTGTCGGGCAGGCTTGCGCTTTaGATTTGTGGAACTGCTCCTCATGGTCTGTGGTTTTCCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFKVVFTLSGRLAL*ICGTAPHGLWFSLN Trigger: GTTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCCCGACAAGGTAAAAACCACTTTAAATGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS-3UTR CAA 90 bp | CACTGGCCAGTCGGAGTTCTGAAAGTGCTCCAAACATCACAGGCTCCAGCACATAAGATGTGCCTGGAATaGCAGATTCATTCTCCTTAT | + |
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Preference number: 5 (lower is better) Translates to: HWPVGVLKVLQTSQAPAHKMCLE*QIHSPY Trigger: ATAAGGAGAATGAATCTGCAATTCCAGGCACATCTT...ATGTGCTGGAGCCTGTGATGTTTGGAGCACTTTCAGAACTCCGACTGGCCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | TGCTCCAAACATCACAGGCTCCAGCACATTCACAAACCTTACAAAATGCTACATAGGTGGAGGGTCTGGTaGAAGGTTTTCCCGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSKHHRLQHIHKPYKMLHRWRVW*KVFPHS Trigger: GGAATGCGGGAAAACCTTCAACCAGACCCTCCACCT...ATGTAGCATTTTGTAAGGTTTGTGAATGTGCTGGAGCCTGTGATGTTTGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | TGCAGTCTAGCTAGGATCTTCTTTGGGATGTATCTGGGAGAGAGACATTCTCTTTTTCAGAGAGCTGGTTaGCTGTCTGATCAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: CSLARIFFGMYLGERHSLFQRAG*LSDQDL Trigger: CAAGTCCTGATCAGACAGCAAACCAGCTCTCTGAAA...AAGAGAATGTCTCTCTCCCAGATACATCCCAAAGAAGATCCTAGCTAGACTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| CDS-3UTR CAA 90 bp | CATAGCTCCAAAACTTGTCTTCCAACACGCAGAGACATGGTCATGCACACAAACGCCTGTCATCACTTTTaGAGGTCTTTTCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSKTCLPTRRDMVMHTNACHHF*RSFLLS Trigger: TGAGAGCAGAAAAGACCTCAAAAAGTGATGACAGGC...GTTTGTGTGCATGACCATGTCTCTGCGTGTTGGAAGACAAGTTTTGGAGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002336.16 |
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| CDS TCA 90 bp | CTTATTGCCCGGTATGCTGGTTTTGCTTGCTTCTGTAGTCGAAGTTaGGGCACATTTCTCCTTATTTTGAGATGGCCTGTCATCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LIARYAGFACFCSRS*GTFLLILRWPVITF Trigger: AAAAGTGATGACAGGCCATCTCAAAATAAGGAGAAATGTGCCTCAACTTCGACTACAGAAGCAAGCAAAACCAGCATACCGGGCAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 90 bp | CACTGGGCGCATGGATCTGGCCTATCTCCAGAGTGGATTTTCAAGTaGTTATTCAATGTAGTTTTGTCAGTGAAACCTTTGTCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HWAHGSGLSPEWIFK*LFNVVLSVKPLSHL Trigger: CAAGTGTGACAAAGGTTTCACTGACAAAACTACATTGAATAATCACTTGAAAATCCACTCTGGAGATAGGCCAGATCCATGCGCCCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS-3UTR CAA 90 bp | CATGTGTGTCTCGTTTCTCTTGTTTTGACTTTGTCCCAAAGACCCAAATGTGAGGCCTGTCATCACTTTTaGAGGTCTTTTCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVCLVSLVLTLSQRPKCEACHHF*RSFLLS Trigger: TGAGAGCAGAAAAGACCTCAAAAAGTGATGACAGGC...CTCACATTTGGGTCTTTGGGACAAAGTCAAAACAAGAGAAACGAGACACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | GTGTTTACCACACGTTGCTATTTAACGTTGATATTTAAACGGCCATGTCTCATTAGCTTTGTGCTCTGCTaGAAGGTTTTCCCGCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFTTRCYLTLIFKRPCLISFVLC*KVFPHS Trigger: CGAGTGCGGGAAAACCTTCAAGCAGAGCACAAAGCT...AATGAGACATGGCCGTTTAAATATCAACGTTAAATAGCAACGTGTGGTAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | TGGTCATTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCAAAAAGGTCAACTCCTaGCTCCAACCTGGTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: WSFTSVLNRIFHGVENVSKKVNS*LQPGDQ Trigger: TTGATCACCAGGTTGGAGCAAGGAGTTGACCTTTTT...GCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAATGACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | TTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCTGTAGTAAGTGTTTTCCGCACTaGTCACACTTGTACGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTSVLNRIFHGVENVSCSKCFPH*SHLYGF Trigger: GAAGCCGTACAAGTGTGACAAGTGCGGAAAACACTT...ACTACAGCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS-3UTR CAA 90 bp | TTCACATCAGTTCTAAACAGAATCTTCCATGGTGTTGAAAATGTTAGCTGTAGTAAGATGTGCCTGGAATaGCAGATTCATTCTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FTSVLNRIFHGVENVSCSKMCLE*QIHSPY Trigger: ATAAGGAGAATGAATCTGCAATTCCAGGCACATCTT...ACTACAGCTAACATTTTCAACACCATGGAAGATTCTGTTTAGAACTGATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 |
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| CDS GCA 72 bp | CGGTATGGATCCTCTTGTGCTCCCTCAGGGATGAGCTaGGGCCGAAGCACTTGTTACACTCTCCACACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RYGSSCAPSGMS*GRSTCYTLHTC Trigger: ACAAGTGTGGAGAGTGTAACAAGTGCTTCGGCCGCAGCTCATCCCTGAGGGAGCACAAGAGGATCCATACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 90 bp | CTTCTTCCCTGCAGAGGTGTCACTTCTGCTGACTCCTGCCTCACCTaGCTGGGGGTCTCCAGGAACATCGTTCTCTTTGGCAAAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPCRGVTSADSCLT*LGVSRNIVLFGKKV Trigger: GACCTTTTTGCCAAAGAGAACGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCTCTGCAGGGAAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | GAGGTGTCACTTCTGCTGACTCCTGCCTCACCTTGCTaGGGGTCTCCAGGAACATCGTTCTCTTTGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: EVSLLLTPASPC*GSPGTSFSLAK Trigger: TTTTGCCAAAGAGAACGATGTTCCTGGAGACCCCCAGCAAGGTGAGGCAGGAGTCAGCAGAAGTGACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | GTCTTTTCTGCTCTCAAACTCTGGGAACCACGGCCTTaGTCTGCCGCCTTCTGCTTCTCCAGTGATGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFSALKLWEPRP*SAAFCFSSDVV Trigger: GACAACATCACTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGTTCCCAGAGTTTGAGAGCAGAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS GCA 72 bp | TTCTGCCTTTGTGGAATTATCCCCTGTCTTCTTCCCTaGAGAGGTGTCACTTCTGCTGACTCCTGCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: FCLCGIIPCLLP*RGVTSADSCLT Trigger: GGTGAGGCAGGAGTCAGCAGAAGTGACACCTCTGCAGGGAAGAAGACAGGGGATAATTCCACAAAGGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS GCA 72 bp | CACCGGTACCTGGAGTTTGCCTCGTGTCTCTTCTGGTaGTTGAGAAGGGCTACTTTGCAAGCGAAGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HRYLEFASCLFW*LRRATLQAKTF Trigger: GAAAGTCTTCGCTTGCAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGCAAACTCCAGGTACCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | GCGCTTTGGATTTGTGGAACTGCTCCTCATGGTCTGTaGTTTTCCCTCAACATCTTTCCCCGAGGTCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALWICGTAPHGL*FSLNIFPRGRL Trigger: AAGCCGACCTCGGGGAAAGATGTTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | CAGGCTTGCGCTTTGGATTTGTGGAACTGCTCCTCATaGTCTGTGGTTTTCCCTCAACATCTTTCCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QACALDLWNCSS*SVVFPQHLSPR Trigger: CCTCGGGGAAAGATGTTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | TTGCACCGGTACCTGGAGTTTGCCTCGTGTCTCTTCTaGTGCTTGAGAAGGGCTACTTTGCAAGCGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LHRYLEFASCLF*CLRRATLQAKT Trigger: AGTCTTCGCTTGCAAAGTAGCCCTTCTCAAGCACCAGAAGAGACACGAGGCAAACTCCAGGTACCGGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | TCACCTTGCTGGGGGTCTCCAGGAACATCGTTCTCTTaGGCAAAAAGGTCAACTCCTTGCTCCAACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCWGSPGTSFS*AKRSTPCSNLV Trigger: CACCAGGTTGGAGCAAGGAGTTGACCTTTTTGCCAAAGAGAACGATGTTCCTGGAGACCCCCAGCAAGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 90 bp | TGCCTTTGGATGCTTGACTTACATCTGAAAGTCTTTCCACACCCCTaGCACCGGTACCTGGAGTTTGCCTCGTGTCTCTTCTGGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLWMLDLHLKVFPHP*HRYLEFASCLFWCL Trigger: CAAGCACCAGAAGAGACACGAGGCAAACTCCAGGTACCGGTGCAAGGGGTGTGGAAAGACTTTCAGATGTAAGTCAAGCATCCAAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | ACCACGGCCTTGATCTGCCGCCTTCTGCTTCTCCAGTaGTGTTGTCTTAGAATTGTCTGGCTTCCGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: TTALICRLLLLQ*CCLRIVWLPDF Trigger: GAAATCCGGAAGCCAGACAATTCTAAGACAACATCACTGGAGAAGCAGAAGGCGGCAGATCAAGGCCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | TTCCGAAGGAGCGCTCTGTGGTGTTGTAGTTGCTGCTaGTGTTTGACCCGAAGATGTGCCTGGAATTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FRRSALWCCSCC*CLTRRCAWNCR Trigger: TCTGCAATTCCAGGCACATCTTCGGGTCAAACATCAGCAGCAACTACAACACCACAGAGCGCTCCTTCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS GCA 72 bp | CTTGTCGGGCAGGCTTGCGCTTTGGATTTGTGGAACTaGTCCTCATGGTCTGTGGTTTTCCCTCAACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVGQACALDLWN*SSWSVVFPQHL Trigger: AAGATGTTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCCCGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | GGAGCGCTCTGTGGTGTTGTAGTTGCTGCTGATGTTTaGCCCGAAGATGTGCCTGGAATTGCAGATTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: GALCGVVVAADV*PEDVPGIADSF Trigger: GAATGAATCTGCAATTCCAGGCACATCTTCGGGTCAAACATCAGCAGCAACTACAACACCACAGAGCGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | TTTTACCTTGTCGGGCAGGCTTGCGCTTTGGATTTGTaGAACTGCTCCTCATGGTCTGTGGTTTTCCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FYLVGQACALDL*NCSSWSVVFPQ Trigger: TTGAGGGAAAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCCCGACAAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | ATGCTTGACTTACATCTGAAAGTCTTTCCACACCCCTaGCACCGGTACCTGGAGTTTGCCTCGTGTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MLDLHLKVFPHP*HRYLEFASCLF Trigger: GAAGAGACACGAGGCAAACTCCAGGTACCGGTGCAAGGGGTGTGGAAAGACTTTCAGATGTAAGTCAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | AAAGTGGTTTTTACCTTGTCGGGCAGGCTTGCGCTTTaGATTTGTGGAACTGCTCCTCATGGTCTGTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KVVFTLSGRLAL*ICGTAPHGLWF Trigger: AAACCACAGACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCCCGACAAGGTAAAAACCACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | TTGCTGCTGATGTTTGACCCGAAGATGTGCCTGGAATaGCAGATTCATTCTCCTTATTGCCCGGTATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLMFDPKMCLE*QIHSPYCPVCW Trigger: CCAGCATACCGGGCAATAAGGAGAATGAATCTGCAATTCCAGGCACATCTTCGGGTCAAACATCAGCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | GCCGCCTTCTGCTTCTCCAGTGATGTTGTCTTAGAATaGTCTGGCTTCCGGATTTCTGCCTTTGTGGAATTA | + |
|
Preference number: 6 (lower is better) Translates to: AAFCFSSDVVLE*SGFRISAFVEL Trigger: TAATTCCACAAAGGCAGAAATCCGGAAGCCAGACAATTCTAAGACAACATCACTGGAGAAGCAGAAGGCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | TTGCATTTAAAGTGGTTTTTACCTTGTCGGGCAGGCTaGCGCTTTGGATTTGTGGAACTGCTCCTCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLKWFLPCRAG*RFGFVELLLMV Trigger: GACCATGAGGAGCAGTTCCACAAATCCAAAGCGCAAGCCTGCCCGACAAGGTAAAAACCACTTTAAATGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | GTCAAGTACGAGCTGTTTCGGAAGTGTTTTCCGCACTaGTCACACTTGTACGGCTTCACCTTTAAATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKYELFRKCFPH*SHLYGFTFKWS Trigger: GCTCCATTTAAAGGTGAAGCCGTACAAGTGTGACAAGTGCGGAAAACACTTCCGAAACAGCTCGTACTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | GCAGATTCATTCTCCTTATTGCCCGGTATGCTGGTTTaGCTTGCTTCTGTAGTCGAAGTTGAGGCACATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ADSFSLLPGMLV*LASVVEVEAHF Trigger: GAAATGTGCCTCAACTTCGACTACAGAAGCAAGCAAAACCAGCATACCGGGCAATAAGGAGAATGAATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | GAAGATGTGCCTGGAATTGCAGATTCATTCTCCTTATaGCCCGGTATGCTGGTTTTGCTTGCTTCTGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EDVPGIADSFSL*PGMLVLLASVV Trigger: GACTACAGAAGCAAGCAAAACCAGCATACCGGGCAATAAGGAGAATGAATCTGCAATTCCAGGCACATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | ATTCTTCGCTTCTTTTCAGAGAGCTGGTTTGCTGTCTaGTCAGGACTTGGTGAAGGTGAGGCTTCATTAACT | + |
|
Preference number: 6 (lower is better) Translates to: ILRFFSESWFAV*SGLGEGEASLT Trigger: AGTTAATGAAGCCTCACCTTCACCAAGTCCTGATCAGACAGCAAACCAGCTCTCTGAAAAGAAGCGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CCA 72 bp | TACATCTTTGAAGATCACTGGTTCCTTGTACCAGGTTaGCAACGACGTGATCGGAATTCTTCGCTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: YIFEDHWFLVPG*QRRDRNSSLLF Trigger: GAAAAGAAGCGAAGAATTCCGATCACGTCGTTGCCAACCTGGTACAAGGAACCAGTGATCTTCAAAGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS CAA 72 bp | AGGAACATCGTTCTCTTTGGCAAAAAGGTCAACTCCTaGCTCCAACCTGGTGATCAACTTTGGCTTGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RNIVLFGKKVNS*LQPGDQLWLEN Trigger: ATTTTCAAGCCAAAGTTGATCACCAGGTTGGAGCAAGGAGTTGACCTTTTTGCCAAAGAGAACGATGTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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| CDS TCA 72 bp | CATGGATCTGGCCTATCTCCAGAGTGGATTTTCAAGTaGTTATTCAATGTAGTTTTGTCAGTGAAACCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HGSGLSPEWIFK*LFNVVLSVKPL Trigger: CAAAGGTTTCACTGACAAAACTACATTGAATAATCACTTGAAAATCCACTCTGGAGATAGGCCAGATCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002336.16 ENSMUST00000122432.4 ENSMUST00000203908.2 |
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