Pregenerated sensors for ZIC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041703Ensembl transcript IDs: ENSMUST00000039118.7
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGTGCTAGAGATTGAACCCAGGGCCTTGTGCATGCTAGGCAAGTaGTCTACCACTGAGCTACATCCCTGGTCCTGTTTTATTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PVLEIEPRALCMLGK*STTELHPWSCFILW Trigger: CCACAAAATAAAACAGGACCAGGGATGTAGCTCAGTGGTAGAGCACTTGCCTAGCATGCACAAGGCCCTGGGTTCAATCTCTAGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 90 bp | TGGCAGTGTATATCTCAATTTTTCCACTCTTCCCTTGATAGAATCTaGCACCAGGCCTGTCCCCCTGCGATGTACAAGTCCGACTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: WQCISQFFHSSLDRI*HQACPPAMYKSDLV Trigger: AACCAAGTCGGACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTCTATCAAGGGAAGAGTGGAAAAATTGAGATATACACTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 90 bp | CTCCTTACTACTCAACAAGTTTGGATACAGCCAGGAGGCAGCATCTaGAATTCCCTATTTAAAATCAAAACACAAACCAGCAGAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: LLTTQQVWIQPGGSI*NSLFKIKTQTSRGQ Trigger: CTGTCCTCTGCTGGTTTGTGTTTTGATTTTAAATAGGGAATTTCAGATGCTGCCTCCTGGCTGTATCCAAACTTGTTGAGTAGTAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR GCA 90 bp | CTGTTGTCAATGCAGCAAGTGTGTGTTTTACAATCAAGAAGCCTTTaGAGAATTAAGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATT | + |
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Preference number: 1 (lower is better) Translates to: LLSMQQVCVLQSRSL*RIKSLPEGSKAALI Trigger: AATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACTTAATTCTGCAAAGGCTTCTTGATTGTAAAACACACACTTGCTGCATTGACAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACAAATTGTATTaGCAGTGTATATCTCAATTTTTCCACTCTTCCCTTGATAGAATC | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHTHKLY*QCISQFFHSSLDRI Trigger: GATTCTATCAAGGGAAGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR GCA 90 bp | TACAAAGACTTTTGGATACAGGTACAGTCCAGGATCTGTTGTCAATaGAGCAAGTGTGTGTTTTACAATCAAGAAGCCTTTGCAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: YKDFWIQVQSRICCQ*SKCVFYNQEAFAEL Trigger: TAATTCTGCAAAGGCTTCTTGATTGTAAAACACACACTTGCTGCATTGACAACAGATCCTGGACTGTACCTGTATCCAAAAGTCTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | TTGCTATTACTTCCCCCTCCAGTGCTAGAGATTGAACCCAGGGCCTaGTGCATGCTAGGCAAGTGCTCTACCACTGAGCTACATCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLLLPPPVLEIEPRA*CMLGKCSTTELHPW Trigger: CCAGGGATGTAGCTCAGTGGTAGAGCACTTGCCTAGCATGCACAAGGCCCTGGGTTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | GACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCATaGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTACCT | + |
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Preference number: 2 (lower is better) Translates to: DPVASLSHQFVSGSA*FQVRTWSKDCHLLP Trigger: AGGTAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCACATGGTCCAAGGACTaGCACTTACTACCTCACTTA | + |
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Preference number: 2 (lower is better) Translates to: GLIRPGGKSESPVCLRLSTWSKD*HLLPHL Trigger: TAAGTGAGGTAGTAAGTGGCAGTCCTTGGACCATGT...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAACTACTCAACAAGTTTaGATACAGCCAGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HGGGGVFRVSEDKLVPLATTQQV*IQPGGS Trigger: GCTGCCTCCTGGCTGTATCCAAACTTGTTGAGTAGT...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR TCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACACCCGGTGGCAAGTCTaGGTCACCAGTTTGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QTSLCLLASQRTYGQNHNTRWQV*VTSLSQ Trigger: CTGAGACAAACTGGTGACTCAGACTTGCCACCGGGT...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACGGTGTCAAAGGCCTCTaGGAGGCACTCTGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: IKRCPRNSTMHCTNIPINGVKGL*EALWDM Trigger: CATGTCCCAGAGTGCCTCTCAGAGGCCTTTGACACC...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGCAAAAAGACGTGCAGGAAGAGTCGAGTTTTCACATTACCTTGTCCATTTTTCAGGTTAGGACATaGTCCAAGGACTGCCACTTA | + |
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Preference number: 2 (lower is better) Translates to: TRQKDVQEESSFHITLSIFQVRT*SKDCHL Trigger: TAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAA...AATGGACAAGGTAATGTGAAAACTCGACTCTTCCTGCACGTCTTTTTGCCTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | ACAAATTGTATTGGCAGTGTATATCTCAATTTTTCCACTCTTCCCTaGATAGAATCTGACACCAGGCCTGTCCCCCTGCGATGTACAAGT | + |
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Preference number: 2 (lower is better) Translates to: TNCIGSVYLNFSTLP*IESDTRPVPLRCTS Trigger: ACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTCTATCAAGGGAAGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | TGGACAGGATGTACCCTAACACTTCCTCAGACATCACTGTGCCTATaGGCATCCCAAAGAACTTATGGTCAAAACCATAACTCCTTACTA | + |
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Preference number: 2 (lower is better) Translates to: WTGCTLTLPQTSLCL*ASQRTYGQNHNSLL Trigger: TAGTAAGGAGTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTGAGGAAGTGTTAGGGTACATCCTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR GCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCACAAGTCCGACTTGGTTaGTTTTTATTTGCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAQVRLG*FLFAIT Trigger: AGTAATAGCAAATAAAAAGCAACCAAGTCGGACTTG...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR GCA 90 bp | ACGAGGCAAAAAGACGTGCAGGAAGAGTCGAGTTTTCACATTACCTTGTCCATTAGGATCTGTTGTCAATaGAGCAAGTGTGTGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: TRQKDVQEESSFHITLSIRICCQ*SKCVFY Trigger: GTAAAACACACACTTGCTGCATTGACAACAGATCCT...AATGGACAAGGTAATGTGAAAACTCGACTCTTCCTGCACGTCTTTTTGCCTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAAATaGTATTGGCAGTGTATATCTCAATTTTTCCACTCTTCCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTHK*YWQCISQFFHSSLD Trigger: ATCAAGGGAAGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCTCTCCATTTCTGCTTaGACAATCACAGTAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IKRCPRNSTMHCTNIPINLSISA*TITVAG Trigger: CCCTGCTACTGTGATTGTTCAAGCAGAAATGGAGAG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR TCA 90 bp | AATCTGAAGACAACATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTACCAGGAGGCAGCATCTaGAATTCCCTATTTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: NLKTTLKGVHVTAPCTVLPGGSI*NSLFKI Trigger: GATTTTAAATAGGGAATTTCAGATGCTGCCTCCTGG...TAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAATGTTGTCTTCAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR GCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCCTCAGACATCACTGTaGCTATTGGCATCCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: IKRCPRNSTMHCTNIPINPQTSL*LLASQR Trigger: TCTTTGGGATGCCAATAGGCACAGTGATGTCTGAGG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR GCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACCAATCAAGAAGCCTTTaGAGAATTAAGTCTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: QTSLCLLASQRTYGQNHNQSRSL*RIKSLP Trigger: TGGTAGAGACTTAATTCTGCAAAGGCTTCTTGATTG...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | ATTGTTATACAAAGACTTTTGGATACAGGTACAGTCCAGGATCTGTaGTCAATGCAGCAAGTGTGTGTTTTACAATCAAGAAGCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IVIQRLLDTGTVQDL*SMQQVCVLQSRSLC Trigger: GCAAAGGCTTCTTGATTGTAAAACACACACTTGCTGCATTGACAACAGATCCTGGACTGTACCTGTATCCAAAAGTCTTTGTATAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR TCA 90 bp | AATCTGAAGACAACATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTATCCTTGTGGCACAGATaGAAGGAAATGCATTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: NLKTTLKGVHVTAPCTVLSLWHR*KEMHLK Trigger: TTTTAAATGCATTTCCTTTCATCTGTGCCACAAGGA...TAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAATGTTGTCTTCAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 90 bp | GTATTAGAAACCAAAGTTGTTTGTTTGATTGTTATACAAAGACTTTaGGATACAGGTACAGTCCAGGATCTGTTGTCAATGCAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VLETKVVCLIVIQRL*DTGTVQDLLSMQQV Trigger: CACTTGCTGCATTGACAACAGATCCTGGACTGTACCTGTATCCAAAAGTCTTTGTATAACAATCAAACAAACAACTTTGGTTTCTAATAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 72 bp | CTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTaGGAGGCACTCTGGGACATGGAGGGGTCCTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LKSSPHYGVKGL*EALWDMEGSWL Trigger: CAACCAGGACCCCTCCATGTCCCAGAGTGCCTCTCAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR GCA 72 bp | CCCCCTCCAGTGCTAGAGATTGAACCCAGGGCCTTGTaGATGCTAGGCAAGTGCTCTACCACTGAGCTACAT | + |
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Preference number: 3 (lower is better) Translates to: PPPVLEIEPRAL*MLGKCSTTELH Trigger: ATGTAGCTCAGTGGTAGAGCACTTGCCTAGCATGCACAAGGCCCTGGGTTCAATCTCTAGCACTGGAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGTCTCAGGCTCAGCATaGTTTCAGGTTAGGACATGG | + |
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Preference number: 3 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAVSGSA*FQVRTW Trigger: CCATGTCCTAACCTGAAACAATGCTGAGCCTGAGAC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 72 bp | CAGGGCCTTGTGCATGCTAGGCAAGTGCTCTACCACTaGGCTACATCCCTGGTCCTGTTTTATTTTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: QGLVHARQVLYH*ATSLVLFYFVV Trigger: AACCACAAAATAAAACAGGACCAGGGATGTAGCTCAGTGGTAGAGCACTTGCCTAGCATGCACAAGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 72 bp | TTATTTGCTATTACTTCCCCCTCCAGTGCTAGAGATTaGACCCAGGGCCTTGTGCATGCTAGGCAAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LFAITSPSSARD*TQGLVHARQVL Trigger: GAGCACTTGCCTAGCATGCACAAGGCCCTGGGTTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACATTGAACCCAGGGCCTaGTGCATGCTAGGCAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: IKRCPRNSTMHCTNIPINIEPRA*CMLGKC Trigger: GCACTTGCCTAGCATGCACAAGGCCCTGGGTTCAAT...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGGACAGAGAAAGCACTaGAATTACTTCTGGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAGQRKH*NYFWFI Trigger: TATAAACCAGAAGTAATTCAAGTGCTTTCTCTGTCC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACTCTCTCCATTTCTGCTaGAACAATCACAGTAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QTSLCLLASQRTYGQNHNSLHFC*NNHSSR Trigger: CCTGCTACTGTGATTGTTCAAGCAGAAATGGAGAGA...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACATCACAGTTTCCCAGTaGTCTGTCTCAGTAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QTSLCLLASQRTYGQNHNITVSQ*SVSVAS Trigger: AGAAGCTACTGAGACAGACAACTGGGAAACTGTGAT...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | ACGAGGCAAAAAGACGTGCAGGAAGAGTCGAGTTTTCACATTACCTTGTCCATTTTGGTTGCTTTTTATTaGCTATTACTTCCCCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TRQKDVQEESSFHITLSILVAFY*LLLPPP Trigger: TGGAGGGGGAAGTAATAGCAAATAAAAAGCAACCAA...AATGGACAAGGTAATGTGAAAACTCGACTCTTCCTGCACGTCTTTTTGCCTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR TCA 72 bp | ACTCAACAAGTTTGGATACAGCCAGGAGGCAGCATCTaGAATTCCCTATTTAAAATCAAAACACAAACCAGC | + |
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Preference number: 3 (lower is better) Translates to: TQQVWIQPGGSI*NSLFKIKTQTS Trigger: GCTGGTTTGTGTTTTGATTTTAAATAGGGAATTTCAGATGCTGCCTCCTGGCTGTATCCAAACTTGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR GCA 72 bp | ATGCAGCAAGTGTGTGTTTTACAATCAAGAAGCCTTTaGAGAATTAAGTCTCTACCAGAAGGCTCAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: MQQVCVLQSRSL*RIKSLPEGSKA Trigger: TGCTTTTGAGCCTTCTGGTAGAGACTTAATTCTGCAAAGGCTTCTTGATTGTAAAACACACACTTGCTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR GCA 72 bp | TTTTGGATACAGGTACAGTCCAGGATCTGTTGTCAATaGAGCAAGTGTGTGTTTTACAATCAAGAAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: FWIQVQSRICCQ*SKCVFYNQEAF Trigger: AAAGGCTTCTTGATTGTAAAACACACACTTGCTGCATTGACAACAGATCCTGGACTGTACCTGTATCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CCA 72 bp | CACACACACACACACACACACACACACAAATTGTATTaGCAGTGTATATCTCAATTTTTCCACTCTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTHTHKLY*QCISQFFHSSL Trigger: AAGGGAAGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | AATCTGAAGACAACATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAACAAGTCCGACTTGGTaGCTTTTTATTTGCTATTAC | + |
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Preference number: 3 (lower is better) Translates to: NLKTTLKGVHVTAPCTVLTSPTW*LFICYY Trigger: GTAATAGCAAATAAAAAGCAACCAAGTCGGACTTGT...TAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAATGTTGTCTTCAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCAGGTTACATTGAGATaGATAATAAAAGCAGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: IKRCPRNSTMHCTNIPINQVTLR*IIKAAE Trigger: CTCCGCTGCTTTTATTATCAATCTCAATGTAACCTG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR-3UTR CAA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCACATTCATCAGCATTaGGTGGTTAACTATAAACCT | + |
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Preference number: 3 (lower is better) Translates to: IKRCPRNSTMHCTNIPINHIHQH*VVNYKP Trigger: AGGTTTATAGTTAACCACCAAATGCTGATGAATGTG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCAGGGGCCCTGCCCGCTaGCCTGTGCCATGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSRGPAR*PVPCAR Trigger: CCGAGCACATGGCACAGGCCAGCGGGCAGGGCCCCT...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGCCTGGGTGAGTCCCTaGGGCCACGGAGCGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAAWVSP*GHGAGG Trigger: GCCGCCCGCTCCGTGGCCTCAGGGACTCACCCAGGC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | AGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTGGTGCGGGCGCCTGGGTaGGTCCCTGAGGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLYQKAQKQPSLWCQRPLVRAPG*VPEATE Trigger: CTCCGTGGCCTCAGGGACTCACCCAGGCGCCCGCAC...CAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGGAGCGGGCGGCTGGTaGGGGAACCTGGGACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAGAGGW*GNLGQP Trigger: GGGCTGTCCCAGGTTCCCGCACCAGCCGCCCGCTCC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | AGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTGAGGAAGAGGAGGGGCTaGAGGCGGGGGCGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLYQKAQKQPSLWCQRPLRKRRG*RRGRRG Trigger: GCCTCGGCGCCCCCGCCTCCAGCCCCTCCTCTTCCT...CAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCGAAGGTGTGTGGAGATaGCTGGGGGCCCCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSEGVWR*LGAPLA Trigger: GGCCAGTGGGGCCCCCAGCCATCTCCACACACCTTC...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCGGCTGGGGGCCCCACTaGCCTGGCAAACATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSGWGPH*PGKHTT Trigger: AGTGGTATGTTTGCCAGGCCAGTGGGGCCCCCAGCC...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | AGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTGCTACGCCGGGGTCAGTaGCTAGGTCCCGCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLYQKAQKQPSLWCQRPLLRRGQ*LGPAGG Trigger: TCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAG...CAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | TCAGGCTCAGCATTGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTATGGCCGTTTAGCGGGTaGCCACCGGGAGCCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSALFQVRTWSKDCHLLWPFSG*PPGAPG Trigger: TCCCGGGGCTCCCGGTGGCCACCCGCTAAACGGCCA...TAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCTGCTGGATCGACTCCTaGTTGGGTCCAGCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSCWIDS*LGPAQG Trigger: CCCCTGTGCTGGACCCAACCAGGAGTCGATCCAGCA...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGTGTGTGGAGATGGCTaGGGGCCCCACTGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAVCGDG*GPHWPG Trigger: GCCAGGCCAGTGGGGCCCCCAGCCATCTCCACACAC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | TCAGGCTCAGCATTGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTACTGCCCGCTGGCCTGTaGCATGTGCTCGGGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSALFQVRTWSKDCHLLLPAGL*HVLGSE Trigger: CTCGGACCCGAGCACATGGCACAGGCCAGCGGGCAG...TAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCGGGGCCCCACTGGCCTaGCAAACATACCACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSGAPLA*QTYHSL Trigger: CAATGAGTGGTATGTTTGCCAGGCCAGTGGGGCCCC...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | AGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTGGGAGGACGAAGTCCCTaGTGTGGCCTTTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYQKAQKQPSLWCQRPLGGRSP*CGLCRC Trigger: GCAGCGGCAAAGGCCACAGCAGGGACTTCGTCCTCC...CAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACGGTGGGGTCGGGTGCTaGGGGGAGCTGCTGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNGGVGC*GELLPD Trigger: GTCCGGCAGCAGCTCCCCCCAGCACCCGACCCCACC...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | ACGAGGCAAAAAGACGTGCAGGAAGAGTCGAGTTTTCACATTACCTTGTCCATTAACATCCCGGCCGGGTaGGGAGGTGGGGTCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRQKDVQEESSFHITLSINIPAG*GGGVGC Trigger: GCACCCGACCCCACCTCCCCACCCGGCCGGGATGTT...AATGGACAAGGTAATGTGAAAACTCGACTCTTCCTGCACGTCTTTTTGCCTCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCGGCTTTTCCCCTGTATaGGTGCGCTTGTGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSGFSPV*VRLWIL Trigger: CAAGATCCACAAGCGCACTCATACAGGGGAAAAGCC...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAACGAAGTCCCTGCTGTaGCCTTTGCCGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLATKSLL*PLPLLL Trigger: CAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGT...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GAATCTGACACCAGGCCTGTCCCCCTGCGATGTACAAGTCCGACTTGGTTGCTTAGGTGGTTCCATTGCTaGAAGGTGTGTGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESDTRPVPLRCTSPTWLLRWFHC*KVCGDG Trigger: GCCATCTCCACACACCTTCCAGCAATGGAACCACCT...AAGCAACCAAGTCGGACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | GACTTGGTTGCTTTTTATTTGCTATTACTTCCCCCTCCAGTGCTAGAGATTGAACGGGTCCGAGCGCAGTaGTGGCTACGCCGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLVAFYLLLLPPPVLEIERVRAQ*WLRRGQ Trigger: CTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCG...TTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAAATAAAAAGCAACCAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCACCTGAGGGGACAGAGTaGTGGATCGACTCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAPEGTE*WIDSWL Trigger: CAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGG...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACGCGCGGAGCGAAGGGTaGTTCGGCGCGGCCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNARSEG*FGAAVK Trigger: CTTTACGGCCGCGCCGAACCACCCTTCGCTCCGCGC...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GAATCTGACACCAGGCCTGTCCCCCTGCGATGTACAAGTCCGACTTGGTTGCTTTCGCTGGTGTGGACATaGGAGTGTTTCTTTCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: ESDTRPVPLRCTSPTWLLSLVWT*ECFFRS Trigger: CGATCGAAAGAAACACTCCCATGTCCACACCAGCGA...AAGCAACCAAGTCGGACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | AATCTGAAGACAACATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATAGTGCGCGTCCCCTaGGCGCGGAGCGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLKTTLKGVHVTAPCTVLIVRVP*ARSEGW Trigger: CCACCCTTCGCTCCGCGCTCAGGGGACGCGCACTAT...TAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAATGTTGTCTTCAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACTTTTGGAGCAGGGCTTaGCGCCGCTGTCCGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNFWSRA*RRCPRT Trigger: CGTCCGCGGACAGCGGCGTCAAGCCCTGCTCCAAAA...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCATTGAGGTTGGTCACCTaGGGGGACAGAGTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLALRLVT*GDRVLD Trigger: ATCCAGCACTCTGTCCCCTCAGGTGACCAACCTCAA...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCAATGTATCGTCCGCATaGCTTCAGGGTTCCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPGGKSESPVCLRLSNVSSA*LQGSHT Trigger: TGTATGGGAACCCTGAAGTCATGCGGACGATACATT...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACCTTTGCCGCTGCTGCTaGCGCCGCCACTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNLCRCC*RRHCWW Trigger: CCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAG...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | GACTTGGTTGCTTTTTATTTGCTATTACTTCCCCCTCCAGTGCTAGAGATTGAAGGCCTTTGCCGCTGCTaGTGCCGCCGCCACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLVAFYLLLLPPPVLEIEGLCRC*CRRHCW Trigger: CCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCC...TTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAAATAAAAAGCAACCAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACCGCCGCCACTGTTGGTaGCAGTGTAGCCCGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNRRHCW*QCSPRG Trigger: CCCTCTCGGGCTACACTGCCACCAACAGTGGCGGCG...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | GAATCTGACACCAGGCCTGTCCCCCTGCGATGTACAAGTCCGACTTGGTTGCTTCTTCCTCAGAGAGCTTaGGTGGGTGTACGATTTATC | + |
|
Preference number: 4 (lower is better) Translates to: ESDTRPVPLRCTSPTWLLLPQRA*VGVRFI Trigger: GATAAATCGTACACCCACCCAAGCTCTCTGAGGAAG...AAGCAACCAAGTCGGACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACTGCCGCCGCCACTGTTaGTGGCAGTGTAGCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNCRRHC*WQCSPR Trigger: TCTCGGGCTACACTGCCACCAACAGTGGCGGCGGCA...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 72 bp | GCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCATaGTTTCAGGTTAGGACATGGTCCAAGGACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLSHQFVSGSA*FQVRTWSKDCH Trigger: GTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGAGACAAACTGGTGACTCAGACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACGTCCGAGCGCAGTGCTaGCTACGCCGGGGTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKRCPRNSTMHCTNIPINVRAQC*LRRGQC Trigger: GCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGAC...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGGCTTGTCGCTGGTGTaGACATGGGAGTGTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAGLSLV*TWECFF Trigger: AAAGAAACACTCCCATGTCCACACCAGCGACAAGCC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCTGGCCTGTGCCATGTaGTCGGGTCCGAGCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKRCPRNSTMHCTNIPINLACAM*SGPSAV Trigger: CACTGCGCTCGGACCCGAGCACATGGCACAGGCCAG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACGAGGGGACAGAGTGCTaGATCGACTCCTGGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNEGTEC*IDSWLG Trigger: ACCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTC...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | AATCTGAAGACAACATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAGGATCGACTCCTGGTTaGGTCCAGCACAGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: NLKTTLKGVHVTAPCTVLGSTPG*VQHRGQ Trigger: TTGTCCCCTGTGCTGGACCCAACCAGGAGTCGATCC...TAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAATGTTGTCTTCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 72 bp | ATTGGCAGTGTATATCTCAATTTTTCCACTCTTCCCTaGATAGAATCTGACACCAGGCCTGTCCCCCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IGSVYLNFSTLP*IESDTRPVPLR Trigger: TCGCAGGGGGACAGGCCTGGTGTCAGATTCTATCAAGGGAAGAGTGGAAAAATTGAGATATACACTGCCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACCTGGCGGGTTCCTCTTaGTCAAAGGGGGCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IKRCPRNSTMHCTNIPINLAGSS*SKGAPS Trigger: TGATGGAGCCCCCTTTGAGCAAGAGGAACCCGCCAG...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CCA 90 bp | TCAGGCTCAGCATTGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTATTCGATCGCTGCTATTaGCAAACTTCCTATCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSALFQVRTWSKDCHLLFDRCY*QTSYHN Trigger: GTTGTGATAGGAAGTTTGCCAATAGCAGCGATCGAA...TAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| 3UTR CAA 72 bp | CCTGCGATGTACAAGTCCGACTTGGTTGCTTTTTATTaGCTATTACTTCCCCCTCCAGTGCTAGAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAMYKSDLVAFY*LLLPPPVLEIE Trigger: TTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAAATAAAAAGCAACCAAGTCGGACTTGTACATCGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR TCA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACAAACATACCACTCATTaGGGTTGGTCACCTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKRCPRNSTMHCTNIPINKHTTH*GWSPEG Trigger: CCCCTCAGGTGACCAACCTCAATGAGTGGTATGTTT...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR GCA 90 bp | CAGACATCACTGTGCCTATTGGCATCCCAAAGAACTTATGGTCAAAACCATAACGTTTCTTTCGATCGCTaGTATTGGCAAACTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLCLLASQRTYGQNHNVSFDR*YWQTSY Trigger: ATAGGAAGTTTGCCAATAGCAGCGATCGAAAGAAAC...GTTATGGTTTTGACCATAAGTTCTTTGGGATGCCAATAGGCACAGTGATGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| 3UTR CAA 72 bp | ACACACACACACACACACACACACACACAAATTGTATaGGCAGTGTATATCTCAATTTTTCCACTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTQIV*AVYISIFPLFP Trigger: AGGGAAGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| 3UTR CAA 72 bp | CACACACACACACACACACACACACACACACACAAATaGTATTGGCAGTGTATATCTCAATTTTTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHK*YWQCISQFFHS Trigger: AGAGTGGAAAAATTGAGATATACACTGCCAATACAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 90 bp | AGCTCGGCCGCAGCCGCCGCGGCGGCCGCCAGCCCAAGGCGCATCTaGCCGTTTAGCGGGTGGCCACCGGGAGCCCCGGGAGAGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAAAAAAAASPRRI*PFSGWPPGAPGESC Trigger: GCACGACTCTCCCGGGGCTCCCGGTGGCCACCCGCTAAACGGCCAGATGCGCCTTGGGCTGGCGGCCGCCGCGGCGGCTGCGGCCGAGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| CDS GCA 90 bp | GTGCTGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGTaGATGGCGACCGCGCGGCGTTGGGAGTGGGCGGGCGGGCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLATPGSVPRSRGWR*MATARRWEWAGGPT Trigger: GGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| CDS CCA 90 bp | TGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGTGCATaGCGACCGCGCGGCGTTGGGAGTGGGCGGGCGGGCCGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WLRRGQCLGPAGGGA*RPRGVGSGRAGRPA Trigger: TGCTGGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| CDS CCA 90 bp | AGCGCAGTGCTGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTaGAGGTGCATGGCGACCGCGCGGCGTTGGGAGTGGGCGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLATPGSVPRSRG*RCMATARRWEWAGG Trigger: CCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
||
| CDS CCA 90 bp | GCCGCGGCGGCCGCCAGCCCAAGGCGCATCTGGCCGTTTAGCGGGTaGCCACCGGGAGCCCCGGGAGAGTCGTGCAGCGCGGGAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAASPRRIWPFSG*PPGAPGESCSAGKS Trigger: GCTCTTTCCCGCGCTGCACGACTCTCCCGGGGCTCCCGGTGGCCACCCGCTAAACGGCCAGATGCGCCTTGGGCTGGCGGCCGCCGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | GGCCCTGCCCGCTGGCCTGTGCCATGTGCTCGGGTCCGAGCGCAGTaGTGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: GPARWPVPCARVRAQ*WLRRGQCLGPAGGG Trigger: ACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGGCACAGGCCAGCGGGCAGGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 90 bp | GTGCCTAGGTCCCGCGGGTGGAGGTGCATGGCGACCGCGCGGCGTTaGGAGTGGGCGGGCGGGCCGACCAGCACCGGGAAGCCTGTCATA | + |
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Preference number: 5 (lower is better) Translates to: VPRSRGWRCMATARR*EWAGGPTSTGKPVI Trigger: TATGACAGGCTTCCCGGTGCTGGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCAC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | CCATGTGCTCGGGTCCGAGCGCAGTGCTGGCTACGCCGGGGTCAGTaGCTAGGTCCCGCGGGTGGAGGTGCATGGCGACCGCGCGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: PCARVRAQCWLRRGQ*LGPAGGGAWRPRGV Trigger: AACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | CCCTGGGAAGGAGGACAGGGGCCCTGCCCGCTGGCCTGTGCCATGTaGTCGGGTCCGAGCGCAGTGCTGGCTACGCCGGGGTCAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PWEGGQGPCPLACAM*SGPSAVLATPGSVP Trigger: AGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGGCACAGGCCAGCGGGCAGGGCCCCTGTCCTCCTTCCCAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 90 bp | CCTGCCCGCTGGCCTGTGCCATGTGCTCGGGTCCGAGCGCAGTGCTaGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: PARWPVPCARVRAQC*LRRGQCLGPAGGGA Trigger: TGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGGCACAGGCCAGCGGGCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | CCCTCCGGAGGACGAAGTCCCTGCTGTGGCCTTTGCCGCTGCTGCTaGCGCCGCCACTGTTGGTGGCAGTGTAGCCCGAGAGGGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSGGRSPCCGLCRCC*RRHCWWQCSPRGQE Trigger: CTCCTGCCCTCTCGGGCTACACTGCCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGTCCTCCGGAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | GGTCCCTCCGGAGGACGAAGTCCCTGCTGTGGCCTTTGCCGCTGCTaGTGCCGCCGCCACTGTTGGTGGCAGTGTAGCCCGAGAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GPSGGRSPCCGLCRC*CRRHCWWQCSPRGQ Trigger: CTGCCCTCTCGGGCTACACTGCCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGTCCTCCGGAGGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | AAAGGTCCCTCCGGAGGACGAAGTCCCTGCTGTGGCCTTTGCCGCTaGTGCTGCCGCCGCCACTGTTGGTGGCAGTGTAGCCCGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KGPSGGRSPCCGLCR*CCRRHCWWQCSPRG Trigger: CCCTCTCGGGCTACACTGCCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGTCCTCCGGAGGGACCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | GGGCTAATTAGACCCGGTGGCAAGTCTGAGTCACCAGTTTGTCTCAGGCTCAGCGTTTTGGAGCAGGGCTaGACGCCGCTGTCCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: GLIRPGGKSESPVCLRLSVLEQG*TPLSAD Trigger: GTCCGCGGACAGCGGCGTCAAGCCCTGCTCCAAAAC...GCTGAGCCTGAGACAAACTGGTGACTCAGACTTGCCACCGGGTCTAATTAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS TCA 90 bp | GCCCCACTGGCCTGGCAAACATACCACTCATTGAGGTTGGTCACCTaGGGGGACAGAGTGCTGGATCGACTCCTGGTTGGGTCCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: APLAWQTYHSLRLVT*GDRVLDRLLVGSST Trigger: TGTGCTGGACCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGGTGACCAACCTCAATGAGTGGTATGTTTGCCAGGCCAGTGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 90 bp | GGTTCCCATACATTTCCTCATCTTCAGACTCAGAGGTGGTTCCATTaGTGGAAGGTGTGTGGAGATGGCTGGGGGCCCCACTGGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GSHTFPHLQTQRWFH*WKVCGDGWGPHWPG Trigger: GCCAGGCCAGTGGGGCCCCCAGCCATCTCCACACACCTTCCAGCAATGGAACCACCTCTGAGTCTGAAGATGAGGAAATGTATGGGAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 90 bp | TCCCATACATTTCCTCATCTTCAGACTCAGAGGTGGTTCCATTGCTaGAAGGTGTGTGGAGATGGCTGGGGGCCCCACTGGCCTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: SHTFPHLQTQRWFHC*KVCGDGWGPHWPGK Trigger: TTTGCCAGGCCAGTGGGGCCCCCAGCCATCTCCACACACCTTCCAGCAATGGAACCACCTCTGAGTCTGAAGATGAGGAAATGTATGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | AGTCTCTACCAGAAGGCTCAAAAGCAGCCCTCATTATGGTGTCAAAGGCCTCTGATGGTGCCGAAAGTTTaGGAGCAGGGCTTGACGCCG | + |
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Preference number: 5 (lower is better) Translates to: SLYQKAQKQPSLWCQRPLMVPKV*EQGLTP Trigger: CGGCGTCAAGCCCTGCTCCAAAACTTTCGGCACCAT...CAGAGGCCTTTGACACCATAATGAGGGCTGCTTTTGAGCCTTCTGGTAGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | GAATCTGACACCAGGCCTGTCCCCCTGCGATGTACAAGTCCGACTTGGTTGCTTGCTTCCTCAGAGAGCTaGGGTGGGTGTACGATTTAT | + |
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Preference number: 5 (lower is better) Translates to: ESDTRPVPLRCTSPTWLLASSES*GGCTIY Trigger: ATAAATCGTACACCCACCCAAGCTCTCTGAGGAAGC...AAGCAACCAAGTCGGACTTGTACATCGCAGGGGGACAGGCCTGGTGTCAGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | CATGGGGGAGGGGGTGTCTTCAGGGTCTCTGAGGATAAATTAGTACCTTTAGCAGTTGGGCCTGAGCCGTaGCCAAATCCGCTAATCTCA | + |
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Preference number: 5 (lower is better) Translates to: HGGGGVFRVSEDKLVPLAVGPEP*PNPLIS Trigger: TGAGATTAGCGGATTTGGCAACGGCTCAGGCCCAAC...TGCTAAAGGTACTAATTTATCCTCAGAGACCCTGAAGACACCCCCTCCCCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | GACTTGGTTGCTTTTTATTTGCTATTACTTCCCCCTCCAGTGCTAGAGATTGAAGCTGGCGGGTTCCTCTaGCTCAAAGGGGGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: DLVAFYLLLLPPPVLEIEAGGFL*LKGGSI Trigger: GATGGAGCCCCCTTTGAGCAAGAGGAACCCGCCAGC...TTCAATCTCTAGCACTGGAGGGGGAAGTAATAGCAAATAAAAAGCAACCAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | TCAGGCTCAGCATTGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTACATATTCTGAAGCTGTaGGGCCTGAGCCGTTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SGSALFQVRTWSKDCHLLHILKL*GLSRCQ Trigger: TTGGCAACGGCTCAGGCCCAACAGCTTCAGAATATG...TAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | TCAGGCTCAGCATTGTTTCAGGTTAGGACATGGTCCAAGGACTGCCACTTACTATTTCGATCGCTGCTATaGGCAAACTTCCTATCACAA | + |
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Preference number: 5 (lower is better) Translates to: SGSALFQVRTWSKDCHLLFRSLL*ANFLSQ Trigger: TTGTGATAGGAAGTTTGCCAATAGCAGCGATCGAAA...TAGTAAGTGGCAGTCCTTGGACCATGTCCTAACCTGAAACAATGCTGAGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS-3UTR CAA 90 bp | ATTAAAAGGTGTCCACGTAACAGCACCATGCACTGTACTAATATACCTATAAACTCAGAGGTGGTTCCATaGCTGGAAGGTGTGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IKRCPRNSTMHCTNIPINSEVVP*LEGVWR Trigger: TCTCCACACACCTTCCAGCAATGGAACCACCTCTGA...GTTTATAGGTATATTAGTACAGTGCATGGTGCTGTTACGTGGACACCTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | GCAGCCGCCGCGGCGGCCGCCAGCCCAAGGCGCATCTaGCCGTTTAGCGGGTGGCCACCGGGAGCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AAAAAAASPRRI*PFSGWPPGAPG Trigger: TCCCGGGGCTCCCGGTGGCCACCCGCTAAACGGCCAGATGCGCCTTGGGCTGGCGGCCGCCGCGGCGGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS TCA 72 bp | CGCGGCGGCCGCCACCGCCCCATAGTGCGCGTCCCCTaGGCGCGGAGCGAAGGGTGGTTCGGCGCGGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: RGGRHRPIVRVP*ARSEGWFGAAV Trigger: TACGGCCGCGCCGAACCACCCTTCGCTCCGCGCTCAGGGGACGCGCACTATGGGGCGGTGGCGGCCGCCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | TCCCGCGGGTGGAGGTGCATGGCGACCGCGCGGCGTTaGGAGTGGGCGGGCGGGCCGACCAGCACCGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRGWRCMATARR*EWAGGPTSTGK Trigger: CTTCCCGGTGCTGGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | CGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGTGCATaGCGACCGCGCGGCGTTGGGAGTGGGCGGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RGQCLGPAGGGA*RPRGVGSGRAG Trigger: GCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CAA 72 bp | GTCCCGCGGGTGGAGGTGCATGGCGACCGCGCGGCGTaGGGAGTGGGCGGGCGGGCCGACCAGCACCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VPRVEVHGDRAA*GVGGRADQHRE Trigger: TTCCCGGTGCTGGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS TCA 72 bp | CGCCGTCCCGGCCCGCGTAGGTGCCGCTGGCCGAGATaGACATCCCGGCCGGGTGGGGAGGTGGGGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RRPGPRRCRWPR*TSRPGGEVGSG Trigger: ACCCGACCCCACCTCCCCACCCGGCCGGGATGTTCATCTCGGCCAGCGGCACCTACGCGGGCCGGGACGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | ACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTGGAGGTaGATGGCGACCGCGCGGCGTTGGGAGTGGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TPGSVPRSRGWR*MATARRWEWAG Trigger: GCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | GGGTGGAGGTGCATGGCGACCGCGCGGCGTTGGGAGTaGGCGGGCGGGCCGACCAGCACCGGGAAGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GWRCMATARRWE*AGGPTSTGKPV Trigger: GACAGGCTTCCCGGTGCTGGTCGGCCCGCCCGCCCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | CCTGAGGCCACGGAGCGGGCGGCTGGTGCGGGAACCTaGGACAGCCCGGGGAGCCCCTGGGAAGGAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PEATERAAGAGT*DSPGSPWEGGQ Trigger: CTGTCCTCCTTCCCAGGGGCTCCCCGGGCTGTCCCAGGTTCCCGCACCAGCCGCCCGCTCCGTGGCCTCAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | CGGGTCCGAGCGCAGTGCTGGCTACGCCGGGGTCAGTaGCTAGGTCCCGCGGGTGGAGGTGCATGGCGACCG | + |
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Preference number: 6 (lower is better) Translates to: RVRAQCWLRRGQ*LGPAGGGAWRP Trigger: CGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | CTGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGTaGAGGTGCATGGCGACCGCGCGGCGTTGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LATPGSVPRSRG*RCMATARRWEW Trigger: CCACTCCCAACGCCGCGCGGTCGCCATGCACCTCCACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | CGCTGGCCTGTGCCATGTGCTCGGGTCCGAGCGCAGTaGTGGCTACGCCGGGGTCAGTGCCTAGGTCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RWPVPCARVRAQ*WLRRGQCLGPA Trigger: CGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGGCACAGGCCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | TGGCCTGTGCCATGTGCTCGGGTCCGAGCGCAGTGCTaGCTACGCCGGGGTCAGTGCCTAGGTCCCGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: WPVPCARVRAQC*LRRGQCLGPAG Trigger: ACCCGCGGGACCTAGGCACTGACCCCGGCGTAGCCAGCACTGCGCTCGGACCCGAGCACATGGCACAGGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | GGAGGACGAAGTCCCTGCTGTGGCCTTTGCCGCTGCTaGTGCCGCCGCCACTGTTGGTGGCAGTGTAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GGRSPCCGLCRC*CRRHCWWQCSP Trigger: CGGGCTACACTGCCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGTCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | GGACGAAGTCCCTGCTGTGGCCTTTGCCGCTGCTGCTaGCGCCGCCACTGTTGGTGGCAGTGTAGCCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: GRSPCCGLCRCC*RRHCWWQCSPR Trigger: TCTCGGGCTACACTGCCACCAACAGTGGCGGCGGCAGCAGCAGCGGCAAAGGCCACAGCAGGGACTTCGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | CACCTGAGGGGACAGAGTGCTGGATCGACTCCTGGTTaGGTCCAGCACAGGGGACAAAGGGTCACCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: HLRGQSAGSTPG*VQHRGQRVTHG Trigger: CCCGTGGGTGACCCTTTGTCCCCTGTGCTGGACCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CAA 72 bp | TCACCTGAGGGGACAGAGTGCTGGATCGACTCCTGGTaGGGTCCAGCACAGGGGACAAAGGGTCACCCACGG | + |
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Preference number: 6 (lower is better) Translates to: SPEGTECWIDSW*GPAQGTKGHPR Trigger: CCGTGGGTGACCCTTTGTCCCCTGTGCTGGACCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CCA 72 bp | TGGTCACCTGAGGGGACAGAGTGCTGGATCGACTCCTaGTTGGGTCCAGCACAGGGGACAAAGGGTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: WSPEGTECWIDS*LGPAQGTKGHP Trigger: TGGGTGACCCTTTGTCCCCTGTGCTGGACCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGGTGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CAA 90 bp | GCACCGGGAAGCCTGTCATATTCTGAAGCTGTTGGGCCTGAGCCGTaGCCAAATCCGCTAATCTCAGCGCTGGCGGGTTCCTCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: APGSLSYSEAVGPEP*PNPLISALAGSSCS Trigger: TGAGCAAGAGGAACCCGCCAGCGCTGAGATTAGCGGATTTGGCAACGGCTCAGGCCCAACAGCTTCAGAATATGACAGGCTTCCCGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS TCA 72 bp | GCCTGGCAAACATACCACTCATTGAGGTTGGTCACCTaGGGGGACAGAGTGCTGGATCGACTCCTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AWQTYHSLRLVT*GDRVLDRLLVG Trigger: CCCAACCAGGAGTCGATCCAGCACTCTGTCCCCTCAGGTGACCAACCTCAATGAGTGGTATGTTTGCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS CAA 72 bp | AGCCTGTCATATTCTGAAGCTGTTGGGCCTGAGCCGTaGCCAAATCCGCTAATCTCAGCGCTGGCGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLSYSEAVGPEP*PNPLISALAGS Trigger: GGAACCCGCCAGCGCTGAGATTAGCGGATTTGGCAACGGCTCAGGCCCAACAGCTTCAGAATATGACAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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| CDS GCA 72 bp | CGCTGGTGTGGACATGGGAGTGTTTCTTTCGATCGCTaGTATTGGCAAACTTCCTATCACAACCGTCAAATT | + |
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Preference number: 6 (lower is better) Translates to: RWCGHGSVSFDR*YWQTSYHNRQI Trigger: AATTTGACGGTTGTGATAGGAAGTTTGCCAATAGCAGCGATCGAAAGAAACACTCCCATGTCCACACCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039118.7 |
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