Pregenerated sensors for ZIC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036972Ensembl transcript IDs: ENSMUST00000066384.7, ENSMUST00000172646.8, ENSMUST00000173054.8, ENSMUST00000173342.8, ENSMUST00000173933.8, ENSMUST00000174212.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAGCAAAGGTCAGCGCAAATGTATCTTAATAGAGTGTCCGCAGTaGAGTGTGCCGCCTTTGAAGCGGCCGCTCCCCGCGCGCATTTCC | + |
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Preference number: 1 (lower is better) Translates to: ESKGQRKCILIECPQ*SVPPLKRPLPARIS Trigger: GGAAATGCGCGCGGGGAGCGGCCGCTTCAAAGGCGGCACACTTCACTGCGGACACTCTATTAAGATACATTTGCGCTGACCTTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR GCA 90 bp | AAACACTGCTTTGTGAGAGAGCCCTTTGATGTCGCAGGCGCAAGATaGGGGCGCTCAGCTGCGCAGGGCAAGATTACCTTGCAAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: KHCFVREPFDVAGAR*GRSAAQGKITLQAT Trigger: TGTTGCTTGCAAGGTAATCTTGCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCTCACAAAGCAGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR TCA 90 bp | CTAACTTACCATGAAGATGCACCGTGGCGAAGAAACACTGCTTTGTaGGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LTYHEDAPWRRNTAL*ESPLMSQAQDAGAQ Trigger: CTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCTCACAAAGCAGTGTTTCTTCGCCACGGTGCATCTTCATGGTAAGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR TCA 90 bp | CAAATACGCCCTCTGATCACCGCAGAAAGCAGAAACAAAGAGAGCTaGGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATC | + |
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Preference number: 1 (lower is better) Translates to: QIRPLITAESRNKES*AAIQAALFFPRIII Trigger: GATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATCAGAGGGCGTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR CCA 90 bp | GCAAGGACAGAATGCACGGTCACAGGACCATCCAGAGCATCGACTTaGTACACTCACCCTCTACCTCTTTCCTTCTTGCATTACCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: ARTECTVTGPSRAST*YTHPLPLSFLHYLK Trigger: CTTTAGGTAATGCAAGAAGGAAAGAGGTAGAGGGTGAGTGTACCAAGTCGATGCTCTGGATGGTCCTGTGACCGTGCATTCTGTCCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR GCA 90 bp | ATCTCCAGCAAAATTCATCCAGTTAGTAAATCTGGGTGGATGGGATaGAGGCAAGGACAGAATGCACGGTCACAGGACCATCCAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: ISSKIHPVSKSGWMG*RQGQNARSQDHPEH Trigger: ATGCTCTGGATGGTCCTGTGACCGTGCATTCTGTCCTTGCCTGCATCCCATCCACCCAGATTTACTAACTGGATGAATTTTGCTGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR TCA 90 bp | AAACCTGACCAGGGGCAAAGTTTCCATTCTAGGCACACTATAAAATaGAGAAGTGCACATAGGGAGGGAGGAGGCACGTGCATGCATTTT | + |
|
Preference number: 1 (lower is better) Translates to: KPDQGQSFHSRHTIK*RSAHREGGGTCMHF Trigger: AAAATGCATGCACGTGCCTCCTCCCTCCCTATGTGCACTTCTTCATTTTATAGTGTGCCTAGAATGGAAACTTTGCCCCTGGTCAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR TCA 90 bp | AACCAATGGGGCAAAGTGAGTTTGACAGAGAGGAGAACAAATCGCTaGCAAAGAACCTTTTACATTTCACCAGCGTTGTTAGGACGACAA | + |
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Preference number: 1 (lower is better) Translates to: NQWGKVSLTERRTNR*QRTFYISPALLGRQ Trigger: TTGTCGTCCTAACAACGCTGGTGAAATGTAAAAGGTTCTTTGTCAGCGATTTGTTCTCCTCTCTGTCAAACTCACTTTGCCCCATTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR CCA 90 bp | TCCTGGGAGGAAGTATATACTGGAGAGCACAGTGACAGTATTAAATaGCGTGAAAGCAAAGGTCAGCGCAAATGTATCTTAATAGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SWEEVYTGEHSDSIK*RESKGQRKCILIEC Trigger: ACACTCTATTAAGATACATTTGCGCTGACCTTTGCTTTCACGCCATTTAATACTGTCACTGTGCTCTCCAGTATATACTTCCTCCCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCGCAGTGAAGTGTGCCGCCTTTGAAGCGGCCGCTCCCCGCGCGCATTTCATGATCGGGAACAAGTaGCCATTCGCGTGGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VSAVKCAAFEAAAPRAHFMIGNK*PFAWVL Trigger: CAAAACCCACGCGAATGGGCACTTGTTCCCGATCAT...GAAATGCGCGCGGGGAGCGGCCGCTTCAAAGGCGGCACACTTCACTGCGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCGGCCGCTCCCCGCGCGCATTTCCATGGCGAGCCTAACGCGGCATGCTGATAAGTGCCCATTCGCGTaGGTTTTGTTTACCGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: KRPLPARISMASLTRHADKCPFA*VLFTGN Trigger: ATTTCCGGTAAACAAAACCCACGCGAATGGGCACTT...ATCAGCATGCCGCGTTAGGCTCGCCATGGAAATGCGCGCGGGGAGCGGCCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCGTCGCAGGCGCAAGATaGGGGCGCTCAGCTGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGLLDVNIMSLMKSLDGLVAGAR*GRSAAQ Trigger: CTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGAC...GAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR GCA 90 bp | GATCACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTATGATCGGGAACAAGTaGCCATTCGCGTGGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: DHRRKQKQRELSGDSSGPMIGNK*PFAWVL Trigger: CAAAACCCACGCGAATGGGCACTTGTTCCCGATCAT...AGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGTATATACTGGAGAGCACAGTCCTAACGCGGCATGCTaGTGCACCGTCAAACTCACA | + |
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Preference number: 2 (lower is better) Translates to: PKHWQDRSWEEVYTGEHSPNAAC*CTVKLT Trigger: TGTGAGTTTGACGGTGCATCAGCATGCCGCGTTAGG...ACTGTGCTCTCCAGTATATACTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTACGTCGCAGGCGCAAGATaGGGGCGCTCAGCTGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: IHFYYDREQVPIRVGFVYVAGAR*GRSAAQ Trigger: CTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGAC...GTAAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR GCA 90 bp | CACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTGTGGCGAAGAAACACTaGTTTGTGAGAGAGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: HRRKQKQRELSGDSSGPFVAKKH*FVREPF Trigger: AAAGGGCTCTCTCACAAAGCAGTGTTTCTTCGCCAC...AAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCCAGAAACACTGCTTTGTaGGAGAGCCCTTTGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: KRAERRFKRPFSSLALLSRNTAL*ESPLMS Trigger: CGACATCAAAGGGCTCTCTCACAAAGCAGTGTTTCT...GGATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | AATACGCCCTCTGATCACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATAATCCTAACTTACCATaGAGATGCACCGTGGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: NTPSDHRRKQKQRELSGDNPNLP*RCTVAK Trigger: CTTCGCCACGGTGCATCTTCATGGTAAGTTAGGATT...ATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATCAGAGGGCGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGATGTATAGTGAACCCCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGATAGAGTGTCCGCAGTaGAGTGTGCCGCCTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: IRMYSEPLNTGKTGPGRKIECPQ*SVPPLK Trigger: CTTCAAAGGCGGCACACTTCACTGCGGACACTCTAT...CTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGGGGTTCACTATACATCCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR CAA 90 bp | TCCAGAGCATCGACTTGGTACACTCACCCTCTACCTCTTTCCTTCTaGCATTACCTAAAGTACCAGTGTTTGTGCAAACGGCCTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRASTWYTHPLPLSF*HYLKYQCLCKRPSH Trigger: GTGGGAAGGCCGTTTGCACAAACACTGGTACTTTAGGTAATGCAAGAAGGAAAGAGGTAGAGGGTGAGTGTACCAAGTCGATGCTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATAGAAACACTGCTTTGTaGGAGAGCCCTTTGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: QRELSGDSSGPFLPSHYYRNTAL*ESPLMS Trigger: CGACATCAAAGGGCTCTCTCACAAAGCAGTGTTTCT...ATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATCATGAAGATGCACCGTaGCGAAGAAACACTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KQRELSGDSSGPFLPSHYHEDAP*RRNTAL Trigger: CAAAGCAGTGTTTCTTCGCCACGGTGCATCTTCATG...ATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAACTCGCCATCAAACCCAAATACGCCCTCTGATCACCGCAGAAAGCAGAAGAAACACTGCTTTGTaGGAGAGCCCTTTGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: LETRHQTQIRPLITAESRRNTAL*ESPLMS Trigger: CGACATCAAAGGGCTCTCTCACAAAGCAGTGTTTCT...TCTGCTTTCTGCGGTGATCAGAGGGCGTATTTGGGTTTGATGGCGAGTTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR TCA 90 bp | AGATTTCTCAGCTCAATAGAAGGCAGACCATCCTTTTTATTCAACCACAAGGACTCCTCCTCCCTTTCTTaGAAGAATCCCGGGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RFLSSIEGRPSFLFNHKDSSSLS*KNPGCQ Trigger: TTGGCACCCGGGATTCTTTCAAGAAAGGGAGGAGGA...GTCCTTGTGGTTGAATAAAAAGGATGGTCTGCCTTCTATTGAGCTGAGAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR-3UTR GCA 90 bp | TATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGGCCTTTCAGGATTTCGTGAGACTTGCCCATTaGCATAGAAATCCTAACTTA | + |
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Preference number: 2 (lower is better) Translates to: YVLNEKPGRAPGSAFQDFVRLAH*HRNPNL Trigger: TAAGTTAGGATTTCTATGGCAATGGGCAAGTCTCAC...GAAATCCTGAAAGGCCGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAGACAATTAAGGGAACATGGACTTCTAACTTTGCTGCCATCTTCCCCATCAATCCTAACTTACCATaGAGATGCACCGTGGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: NKTIKGTWTSNFAAIFPINPNLP*RCTVAK Trigger: CTTCGCCACGGTGCATCTTCATGGTAAGTTAGGATT...GATGGGGAAGATGGCAGCAAAGTTAGAAGTCCATGTTCCCTTAATTGTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCCATTTTTATTATaGTCGGGAACAAGTGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KQRELSGDSSGPFLPSHYYPFLL*SGTSAH Trigger: ATGGGCACTTGTTCCCGATCATAATAAAAATGGATA...ATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAGACAATTAAGGGAACATGGACTTCTAACTTTGCTGCCATCTTCCCCATCGTGGCGAAGAAACACTaGTTTGTGAGAGAGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NKTIKGTWTSNFAAIFPIVAKKH*FVREPF Trigger: AAAGGGCTCTCTCACAAAGCAGTGTTTCTTCGCCAC...GATGGGGAAGATGGCAGCAAAGTTAGAAGTCCATGTTCCCTTAATTGTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGATGTATAGTGAACCCCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGAGTGACAGTATTAAATaGCGTGAAAGCAAAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IRMYSEPLNTGKTGPGRKSDSIK*RESKGQ Trigger: CTGACCTTTGCTTTCACGCCATTTAATACTGTCACT...CTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGGGGTTCACTATACATCCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR CAA 90 bp | AAGAGACATTTTGCAGCAACTCTAAGGGAGTACATGGGTTACAACTaGGGGACAGTTCTTCACAAATCATTTAGTAAGCACAGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRHFAATLREYMGYN*GTVLHKSFSKHREQ Trigger: CTGCTCCCTGTGCTTACTAAATGATTTGTGAAGAACTGTCCCCAAGTTGTAACCCATGTACTCCCTTAGAGTTGCTGCAAAATGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCTTTCAGGATTTCAGTaGGACTTGCCCATTGCCATA | + |
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Preference number: 2 (lower is better) Translates to: KGLLDVNIMSLMKSLDGLLSGFQ*DLPIAI Trigger: TATGGCAATGGGCAAGTCTCACTGAAATCCTGAAAG...GAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTAATGGTTAGGAAACACAGTGGATCTATTTATACCAGAAGTTTCTTGGAACCTAGTCATTTACTCTaGCTCTGGAGCCTATGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LLMVRKHSGSIYTRSFLEPSHLL*LWSLWA Trigger: CGCCCATAGGCTCCAGAGTCAGAGTAAATGACTAGG...TTCCAAGAAACTTCTGGTATAAATAGATCCACTGTGTTTCCTAACCATTAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR-3UTR CCA 90 bp | CGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGTCCGCGTCAAACATGAAGATGCACCGTaGCGAAGAAACACTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: RVGFVYRKLNENDLVRVKHEDAP*RRNTAL Trigger: CAAAGCAGTGTTTCTTCGCCACGGTGCATCTTCATG...TTTGACGCGGACTAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR CCA 90 bp | TTATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTCATGAAGATGCACCGTaGCGAAGAAACACTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSIFIMIGNKCPFAWVLFHEDAP*RRNTAL Trigger: CAAAGCAGTGTTTCTTCGCCACGGTGCATCTTCATG...AAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAATGGTTAGGAAACACAGTGGATCTATTTATACCAGAAGTTTCTTGGAATCTTTAGCAATGGTTTaGAACCAATGGGGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLMVRKHSGSIYTRSFLESLAMV*NQWGKV Trigger: CACTTTGCCCCATTGGTTCCAAACCATTGCTAAAGA...TTCCAAGAAACTTCTGGTATAAATAGATCCACTGTGTTTCCTAACCATTAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR TCA 72 bp | GGTCAGCGCAAATGTATCTTAATAGAGTGTCCGCAGTaGAGTGTGCCGCCTTTGAAGCGGCCGCTCCCCGCG | + |
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Preference number: 3 (lower is better) Translates to: GQRKCILIECPQ*SVPPLKRPLPA Trigger: CGCGGGGAGCGGCCGCTTCAAAGGCGGCACACTTCACTGCGGACACTCTATTAAGATACATTTGCGCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR GCA 72 bp | TTTGTGAGAGAGCCCTTTGATGTCGCAGGCGCAAGATaGGGGCGCTCAGCTGCGCAGGGCAAGATTACCTTG | + |
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Preference number: 3 (lower is better) Translates to: FVREPFDVAGAR*GRSAAQGKITL Trigger: CAAGGTAATCTTGCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCTCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR TCA 72 bp | CGCGCGCATTTCCATGGCGAGCCTAACGCGGCATGCTaGTGCACCGTCAAACTCACACTTTCAACCCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: RAHFHGEPNAAC*CTVKLTLSTPK Trigger: TTTTGGGGTTGAAAGTGTGAGTTTGACGGTGCATCAGCATGCCGCGTTAGGCTCGCCATGGAAATGCGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR CCA 72 bp | GAATGCACGGTCACAGGACCATCCAGAGCATCGACTTaGTACACTCACCCTCTACCTCTTTCCTTCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: ECTVTGPSRAST*YTHPLPLSFLH Trigger: ATGCAAGAAGGAAAGAGGTAGAGGGTGAGTGTACCAAGTCGATGCTCTGGATGGTCCTGTGACCGTGCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR TCA 72 bp | TTGGTAAGCTTCTCAGGATGCCCTAGTCATTTACTCTaGCTCTGGAGCCTATGGGCGCTGTCAAGATGTTCG | + |
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Preference number: 3 (lower is better) Translates to: LVSFSGCPSHLL*LWSLWALSRCS Trigger: CGAACATCTTGACAGCGCCCATAGGCTCCAGAGTCAGAGTAAATGACTAGGGCATCCTGAGAAGCTTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR TCA 72 bp | CAGGGGCAAAGTTTCCATTCTAGGCACACTATAAAATaGAGAAGTGCACATAGGGAGGGAGGAGGCACGTGC | + |
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Preference number: 3 (lower is better) Translates to: QGQSFHSRHTIK*RSAHREGGGTC Trigger: GCACGTGCCTCCTCCCTCCCTATGTGCACTTCTTCATTTTATAGTGTGCCTAGAATGGAAACTTTGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR-3UTR CAA 90 bp | GGCCTTGGGCTTTTCAGTTTGTACCCAAAAGCCAGCCCAGACCTAAGGATACCATTGAACAACCCGAGCTaGATTGGACCTTTCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GLGLFSLYPKASPDLRIPLNNPS*IGPFSF Trigger: AAAGGAGAAAGGTCCAATCAAGCTCGGGTTGTTCAA...TGGTATCCTTAGGTCTGGGCTGGCTTTTGGGTACAAACTGAAAAGCCCAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR GCA 72 bp | CAAGTTGGCCACCTTCGTCTTAAATCCTCATTCTGTTaGACACAACTCAACTGGGGATGCTCCCTTGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: QVGHLRLKSSFC*TQLNWGCSLGK Trigger: CTTACCAAGGGAGCATCCCCAGTTGAGTTGTGTGCAACAGAATGAGGATTTAAGACGAAGGTGGCCAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR GCA 72 bp | CTTTCCTTCTTGCATTACCTAAAGTACCAGTGTTTGTaGAAACGGCCTTCCCACATCTACACACATCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSFLHYLKYQCL*KRPSHIYTHHQ Trigger: CTGGTGATGTGTGTAGATGTGGGAAGGCCGTTTGCACAAACACTGGTACTTTAGGTAATGCAAGAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| 3UTR-3UTR CAA 90 bp | AGATTTCTCAGCTCAATAGAAGGCAGACCATCCTTTTTATTCAACCACAAGGACCTTGGGCTTTTCAGTTaGTACCCAAAAGCCAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RFLSSIEGRPSFLFNHKDLGLFS*YPKASP Trigger: TGGGCTGGCTTTTGGGTACAAACTGAAAAGCCCAAG...GTCCTTGTGGTTGAATAAAAAGGATGGTCTGCCTTCTATTGAGCTGAGAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| 3UTR TCA 72 bp | GGCAAAGTGAGTTTGACAGAGAGGAGAACAAATCGCTaGCAAAGAACCTTTTACATTTCACCAGCGTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GKVSLTERRTNR*QRTFYISPALL Trigger: TAACAACGCTGGTGAAATGTAAAAGGTTCTTTGTCAGCGATTTGTTCTCCTCTCTGTCAAACTCACTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| 3UTR CCA 72 bp | GAAGTATATACTGGAGAGCACAGTGACAGTATTAAATaGCGTGAAAGCAAAGGTCAGCGCAAATGTATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EVYTGEHSDSIK*RESKGQRKCIL Trigger: TAAGATACATTTGCGCTGACCTTTGCTTTCACGCCATTTAATACTGTCACTGTGCTCTCCAGTATATACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCCAGGGCTGTGGCTGTTaGCAGAGTGTCGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REPFDVAGARCGRSAAQGQGCGC*QSVAAG Trigger: GCCCGCAGCGACACTCTGGCAACAGCCACAGCCCTG...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCGCAGTGAAGTGTGCCGCCTTTGAAGCGGCCGCTCCCCGCGCGCATTTCGCGAGCTGGGGCCCATaGTGTCCACAGCTGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAVKCAAFEAAAPRAHFASWGP*CPQLLP Trigger: AGGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGC...GAAATGCGCGCGGGGAGCGGCCGCTTCAAAGGCGGCACACTTCACTGCGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| CDS-3UTR GCA 90 bp | AAGCGGCCGCTCCCCGCGCGCATTTCCATGGCGAGCCTAACGCGGCATGCTGATTCCAGGGCCATGGGGTaGGGTGAGGTTCATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRPLPARISMASLTRHADSRAMG*GEVHGQ Trigger: CTGACCATGAACCTCACCGCACCCCATGGCCCTGGA...ATCAGCATGCCGCGTTAGGCTCGCCATGGAAATGCGCGCGGGGAGCGGCCGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCGACCTTCCCACACCCTaGGAAAGGACAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: REPFDVAGARCGRSAAQGDLPTP*ERTREG Trigger: CCCTTCCCTTGTCCTTTCCCAGGGTGTGGGAAGGTC...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCCGTGCGAATGTTTCTTaGGGTCGCTGCTGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: REPFDVAGARCGRSAAQGRANVS*GRCCWR Trigger: TCGCCAACAGCAGCGACCGCAAGAAACATTCGCACG...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCCATGGTGTCCACAGCTaGTACCTGTTGTCGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: REPFDVAGARCGRSAAQGHGVHS*YLLSRQ Trigger: TTGTCTCGACAACAGGTAGCAGCTGTGGACACCATG...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| CDS-3UTR GCA 90 bp | AGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCAAGATTACCTTGCAAGCAACCAAATGTGGTTAGCCTaGTCTGGGCCACCGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKMRALSCAGQDYLASNQMWLA*SGPPTC Trigger: GCACGTCGGTGGCCCAGAGCAGGCTAACCACATTTG...GTTGCTTGCAAGGTAATCTTGCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR TCA 90 bp | AATACGCCCTCTGATCACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATCGCAGAGCAAGCCACTaGGGGCTCACGGCCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTPSDHRRKQKQRELSGDRRASH*GLTAAF Trigger: GAAAGCGGCCGTGAGCCCTCAGTGGCTTGCTCTGCG...ATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATCAGAGGGCGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | GATCACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTCAAATGTGGTTAGCCTaGTCTGGGCCACCGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DHRRKQKQRELSGDSSGPQMWLA*SGPPTC Trigger: GCACGTCGGTGGCCCAGAGCAGGCTAACCACATTTG...AGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATGAAGAAGCGGCGAGCTaGGGCCCATGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KQRELSGDSSGPFLPSHYEEAAS*GPWCPQ Trigger: CTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTC...ATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGGCTTTTCAGTTTGTACCCAAAAGCCAGCCCAGACCTAAGGATACCAAACCGTGCAGGGCTGTaGCTGTTGCCAGAGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLFSLYPKASPDLRIPNRAGL*LLPECR Trigger: GCGACACTCTGGCAACAGCCACAGCCCTGCACGGTT...TGGTATCCTTAGGTCTGGGCTGGCTTTTGGGTACAAACTGAAAAGCCCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGGCCTTTCAGGGCTGTGGCTGTTaGCAGAGTGTCGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKYYVLNEKPGRAPGSAFQGCGC*QSVAAG Trigger: GCCCGCAGCGACACTCTGGCAACAGCCACAGCCCTG...AAAGGCCGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAACTCGCCATCAAACCCAAATACGCCCTCTGATCACCGCAGAAAGCAGAGAAGAAGCGGCGAGCTaGGGCCCATGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LETRHQTQIRPLITAESREEAAS*GPWCPQ Trigger: CTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTC...TCTGCTTTCTGCGGTGATCAGAGGGCGTATTTGGGTTTGATGGCGAGTTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATAGTCGTAGCCAGAGCTaGGTGGCGGTGAGCGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQRELSGDSSGPFLPSHYSRSQS*VAVSDH Trigger: ATGGTCGCTCACCGCCACCCAGCTCTGGCTACGACT...ATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | TATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGGCCTTTCAGGATTTCGCGAGCTGGGGCCCATaGTGTCCACAGCTGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: YVLNEKPGRAPGSAFQDFASWGP*CPQLLL Trigger: AAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGC...GAAATCCTGAAAGGCCGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGGGCTTTTCAGTTTGTACCCAAAAGCCAGCCCAGACCTAAGGATACCAGTTTCTTGCGGTCGCTaGTGTTGGCGAAACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLFSLYPKASPDLRIPVSCGR*CWRNAS Trigger: AGAGGCGTTTCGCCAACAGCAGCGACCGCAAGAAAC...TGGTATCCTTAGGTCTGGGCTGGCTTTTGGGTACAAACTGAAAAGCCCAAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATGACCTTCCCACACCCTaGGAAAGGACAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRELSGDSSGPFLPSHYYDLPTP*ERTREG Trigger: CCCTTCCCTTGTCCTTTCCCAGGGTGTGGGAAGGTC...ATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGATGTATAGTGAACCCCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGAGTCGTAGCCAGAGCTaGGTGGCGGTGAGCGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRMYSEPLNTGKTGPGRKSRSQS*VAVSDH Trigger: ATGGTCGCTCACCGCCACCCAGCTCTGGCTACGACT...CTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGGGGTTCACTATACATCCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAGTTTGTACCCAAAAGCCAGCCCAGACCTAAGGATACCACACAGTGGCGTTTCTTGCGGTCGCTaGTGTTGGCGAAACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLYPKASPDLRIPHSGVSCGR*CWRNAS Trigger: AGAGGCGTTTCGCCAACAGCAGCGACCGCAAGAAAC...GCCACTGTGTGGTATCCTTAGGTCTGGGCTGGCTTTTGGGTACAAACTGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCGTGCGAATGTTTCTTaGGGTCGCTGCTGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRELSGDSSGPFLPSHYYRANVS*GRCCWR Trigger: TCGCCAACAGCAGCGACCGCAAGAAACATTCGCACG...ATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATTCGCTCGTGTGCACGTaGGAATGTTTCTTGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QRELSGDSSGPFLPSHYYSLVCT*ECFLRS Trigger: CGACCGCAAGAAACATTCGCACGTGCACACGAGCGA...ATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCATGAAGATGCACCGTGGCGAAGAAACACTGCTTTGTGAGAGAGCCCTTTCGCTCGTGTGCACGTaGGAATGTTTCTTGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTMKMHRGEETLLCERALSLVCT*ECFLRS Trigger: CGACCGCAAGAAACATTCGCACGTGCACACGAGCGA...AAGGGCTCTCTCACAAAGCAGTGTTTCTTCGCCACGGTGCATCTTCATGGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGGAAGAAGCGGCGAGCTaGGGCCCATGGTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VRRKYYVLNEKPGRAPGSEEAAS*GPWCPQ Trigger: CTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTC...CGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| 3UTR CAA 72 bp | AGAATGCACGGTCACAGGACCATCCAGAGCATCGACTaGGTACACTCACCCTCTACCTCTTTCCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RMHGHRTIQSID*VHSPSTSFLLA Trigger: TGCAAGAAGGAAAGAGGTAGAGGGTGAGTGTACCAAGTCGATGCTCTGGATGGTCCTGTGACCGTGCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
||
| CDS-3UTR TCA 90 bp | CGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGTCCGCGTCAAACGCAGAGCAAGCCACTaGGGGCTCACGGCCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGFVYRKLNENDLVRVKRRASH*GLTAAF Trigger: GAAAGCGGCCGTGAGCCCTCAGTGGCTTGCTCTGCG...TTTGACGCGGACTAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR TCA 90 bp | GATCACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTCCACAGCTGCTACTTaGTTCTTTCAGAGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DHRRKQKQRELSGDSSGPSTAAT*FFQSVS Trigger: AGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGA...AGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | TTATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTCAGGGCTGTGGCTGTTaGCAGAGTGTCGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIFIMIGNKCPFAWVLFQGCGC*QSVAAG Trigger: GCCCGCAGCGACACTCTGGCAACAGCCACAGCCCTG...AAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGACAATTAAGGGAACATGGACTTCTAACTTTGCTGCCATCTTCCCCATCTCCAGGGCCATGGGGTaGGGTGAGGTTCATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTIKGTWTSNFAAIFPISRAMG*GEVHGQ Trigger: CTGACCATGAACCTCACCGCACCCCATGGCCCTGGA...GATGGGGAAGATGGCAGCAAAGTTAGAAGTCCATGTTCCCTTAATTGTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCTCCAGGGCCATGGGGTaGGGTGAGGTTCATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDVNIMSLMKSLDGLSRAMG*GEVHGQ Trigger: CTGACCATGAACCTCACCGCACCCCATGGCCCTGGA...GAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGCAAATGTGGTTAGCCTaGTCTGGGCCACCGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRRKYYVLNEKPGRAPGSQMWLA*SGPPTC Trigger: GCACGTCGGTGGCCCAGAGCAGGCTAACCACATTTG...CGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGCCCATTCGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTACGCAGAGCAAGCCACTaGGGGCTCACGGCCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPIRVGFVYRKLNENDLRRASH*GLTAAF Trigger: GAAAGCGGCCGTGAGCCCTCAGTGGCTTGCTCTGCG...TAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCGAATGGGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGTCGCTCGTGTGCACGTaGGAATGTTTCTTGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRRKYYVLNEKPGRAPGSSLVCT*ECFLRS Trigger: CGACCGCAAGAAACATTCGCACGTGCACACGAGCGA...CGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCCCATGGTGTCCACAGCTaGTACTTGATTCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRAERRFKRPFSSLALLSHGVHS*YLILSE Trigger: CTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATG...GGATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| 3UTR CAA 72 bp | CATTCTGTTGCACACAACTCAACTGGGGATGCTCCCTaGGTAAGCTTCTCAGGATGCCCTAGTCATTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSVAHNSTGDAP*VSFSGCPSHLL Trigger: GAGTAAATGACTAGGGCATCCTGAGAAGCTTACCAAGGGAGCATCCCCAGTTGAGTTGTGTGCAACAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAACTCGCCATCAAACCCAAATACGCCCTCTGATCACCGCAGAAAGCAGACCTCGAACTCACATCTaGAAGGTTTCTCGCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LETRHQTQIRPLITAESRPRTHI*KVSRLY Trigger: ATACAGGCGAGAAACCTTTCAGATGTGAGTTCGAGG...TCTGCTTTCTGCGGTGATCAGAGGGCGTATTTGGGTTTGATGGCGAGTTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAGTTTGTACCCAAAAGCCAGCCCAGACCTAAGGATACCACACAGTGGCCATGGTGTCCACAGCTaGTACTTGATTCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLYPKASPDLRIPHSGHGVHS*YLILSE Trigger: CTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATG...GCCACTGTGTGGTATCCTTAGGTCTGGGCTGGCTTTTGGGTACAAACTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172646.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTACGACCTTCCCACACCCTaGGAAAGGACAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHFYYDREQVPIRVGFVYDLPTP*ERTREG Trigger: CCCTTCCCTTGTCCTTTCCCAGGGTGTGGGAAGGTC...GTAAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR CCA 90 bp | CGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGTCCGCGTCAAAAGTCGTAGCCAGAGCTaGGTGGCGGTGAGCGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGFVYRKLNENDLVRVKSRSQS*VAVSDH Trigger: ATGGTCGCTCACCGCCACCCAGCTCTGGCTACGACT...TTTGACGCGGACTAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTCGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGTCCGCTCATGGTCAGGTTCATaGCGCCATAACCGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIRVGFVYRKLNENDLVRSWSGS*RHNRAG Trigger: CCCTGCACGGTTATGGCGGCATGAACCTGACCATGA...GCGGACTAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCGAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTCGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGTCCGCGTTTCTTGCGGTCGCTaGTGTTGGCGAAACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIRVGFVYRKLNENDLVRVSCGR*CWRNAS Trigger: AGAGGCGTTTCGCCAACAGCAGCGACCGCAAGAAAC...GCGGACTAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCGAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGCCCATTCGCGTGGGTTTTGTTTACCGGAAATTAAATGAAAATGATTTAGCGAGCTGGGGCCCATaGTGTCCACAGCTGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QVPIRVGFVYRKLNENDLASWGP*CPQLLL Trigger: AAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGC...TAAATCATTTTCATTTAATTTCCGGTAAACAAAACCCACGCGAATGGGCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR TCA 90 bp | AAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCCTATTTTGAGATTTTCTaGTCTAGCAAAGACCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRAERRFKRPFSSLALLSYFEIF*SSKDLP Trigger: GGGAAGGTCTTTGCTAGATCAGAAAATCTCAAAATA...GGATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR GCA 90 bp | TTATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTCGTGCGAATGTTTCTTaGGGTCGCTGCTGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSIFIMIGNKCPFAWVLFRANVS*GRCCWR Trigger: TCGCCAACAGCAGCGACCGCAAGAAACATTCGCACG...AAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR CAA 72 bp | GTCAAACTCACACTTTCAACCCCAAAACGCGACTCTTaGAACAACCCGAGCTTGATTGGACCTTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLTLSTPKRDS*NNPSLIGPFSF Trigger: AAAGGAGAAAGGTCCAATCAAGCTCGGGTTGTTCAAAGAGTCGCGTTTTGGGGTTGAAAGTGTGAGTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| 3UTR CAA 72 bp | CCTCTTTCCTTCTTGCATTACCTAAAGTACCAGTGTTaGTGCAAACGGCCTTCCCACATCTACACACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSFLHYLKYQC*CKRPSHIYTHH Trigger: GTGATGTGTGTAGATGTGGGAAGGCCGTTTGCACAAACACTGGTACTTTAGGTAATGCAAGAAGGAAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| 3UTR CAA 72 bp | TCGACTTGGTACACTCACCCTCTACCTCTTTCCTTCTaGCATTACCTAAAGTACCAGTGTTTGTGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: STWYTHPLPLSF*HYLKYQCLCKR Trigger: CCGTTTGCACAAACACTGGTACTTTAGGTAATGCAAGAAGGAAAGAGGTAGAGGGTGAGTGTACCAAGTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS-3UTR TCA 90 bp | CCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGTATATACTGGAGAGCACAGTTATTTTGAGATTTTCTaGTCTAGCAAAGACCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKHWQDRSWEEVYTGEHSYFEIF*SSKDLP Trigger: GGGAAGGTCTTTGCTAGATCAGAAAATCTCAAAATA...ACTGTGCTCTCCAGTATATACTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCCTCGAACTCACATCTaGAAGGTTTCTCGCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDVNIMSLMKSLDGLPRTHI*KVSRLY Trigger: ATACAGGCGAGAAACCTTTCAGATGTGAGTTCGAGG...GAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR TCA 90 bp | ATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTACCCTCGAACTCACATCTaGAAGGTTTCTCGCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IHFYYDREQVPIRVGFVYPRTHI*KVSRLY Trigger: ATACAGGCGAGAAACCTTTCAGATGTGAGTTCGAGG...GTAAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCTCCACAGCTGCTACTTaGTTCTTTCAGAGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLDVNIMSLMKSLDGLSTAAT*FFQSVS Trigger: AGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGA...GAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| 3UTR CAA 72 bp | ACAGGTACATGTTTTCAAGGAGATTATGCCTCAGCTTaGAACTTTATTCAACAACCACTGACAAATATACAC | + |
|
Preference number: 4 (lower is better) Translates to: TGTCFQGDYASA*NFIQQPLTNIH Trigger: GTGTATATTTGTCAGTGGTTGTTGAATAAAGTTCAAAGCTGAGGCATAATCTCCTTGAAAACATGTACCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS-3UTR CAA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCATGGTGCTGAAAGTTTaGGAGCAGGGACGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: REPFDVAGARCGRSAAQGMVLKV*EQGRGD Trigger: GTCCCCGCGTCCCTGCTCCAAAACTTTCAGCACCAT...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS GCA 90 bp | GGCTGTGGCTGTTGCCAGAGTGTCGCTGCGGGCCATAGGCCCTGGTaGAAAAGGTTCCGACCTCGCATACATGTCTCCAGGGATCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGCCQSVAAGHRPW*KRFRPRIHVSRDPQ Trigger: CTGGGGATCCCTGGAGACATGTATGCGAGGTCGGAACCTTTTGCACCAGGGCCTATGGCCCGCAGCGACACTCTGGCAACAGCCACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS CCA 90 bp | CAGGGCTGTGGCTGTTGCCAGAGTGTCGCTGCGGGCCATAGGCCCTaGTGCAAAAGGTTCCGACCTCGCATACATGTCTCCAGGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGCGCCQSVAAGHRP*CKRFRPRIHVSRDP Trigger: GGGATCCCTGGAGACATGTATGCGAGGTCGGAACCTTTTGCACCAGGGCCTATGGCCCGCAGCGACACTCTGGCAACAGCCACAGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS GCA 90 bp | CATGGTCAGGTTCATGCCGCCATAACCGTGCAGGGCTGTGGCTGTTaGCAGAGTGTCGCTGCGGGCCATAGGCCCTGGTGCAAAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HGQVHAAITVQGCGC*QSVAAGHRPWCKRF Trigger: GAACCTTTTGCACCAGGGCCTATGGCCCGCAGCGACACTCTGGCAACAGCCACAGCCCTGCACGGTTATGGCGGCATGAACCTGACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS GCA 90 bp | AGGGGTTCGAAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTaGTACCTGTTGTCGAGACAAATAACGTGCATGAGAAGCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSKKRRAGAHGVHS*YLLSRQITCMRSGG Trigger: GCCACCGCTTCTCATGCACGTTATTTGTCTCGACAACAGGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTCGAACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS-3UTR CAA 90 bp | AAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTCTTCCCTCGCATTATTATCCGCAGGGCTGTGGCTGTaGCCAGAGTGTCGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRAERRFKRPFSSLALLSAGLWL*PECRCG Trigger: CCCGCAGCGACACTCTGGCAACAGCCACAGCCCTGC...GGATAATAATGCGAGGGAAGAAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS CCA 90 bp | CCCGGAAGCACGGAGGGGTTCGAAGAAGCGGCGAGCTGGGGCCCATaGTGTCCACAGCTGCTACTTGATTCTTTCAGAGTGTTTCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGSTEGFEEAASWGP*CPQLLLDSFRVFLY Trigger: GTACAGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTCGAACCCCTCCGTGCTTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGCCCTTTGATGTCGCAGGCGCAAGATGCGGGCGCTCAGCTGCGCAGGGCGTCCACAGCTGCTACTaGATTCTTTCAGAGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: REPFDVAGARCGRSAAQGVHSCY*ILSECF Trigger: GAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGAC...GCCCTGCGCAGCTGAGCGCCCGCATCTTGCGCCTGCGACATCAAAGGGCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS GCA 90 bp | AGGGGTTCGAAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTaGTACTTGATTCTTTCAGAGTGTTTCTGTACAGCCGTAACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSKKRRAGAHGVHS*YLILSECFCTAVTA Trigger: AGCGGTTACGGCTGTACAGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTCGAACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS-3UTR CAA 90 bp | CGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGATCGGCCTTTGCAGGGCTGTGGCTGTaGCCAGAGTGTCGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKYYVLNEKPGRAPGSAFAGLWL*PECRCG Trigger: CCCGCAGCGACACTCTGGCAACAGCCACAGCCCTGC...AAAGGCCGATCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR CAA 90 bp | CACCGCAGAAAGCAGAAACAAAGAGAGCTGAGCGGCGATTCAAGCGGCCCTTTTATGGTGCTGAAAGTTTaGGAGCAGGGACGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRRKQKQRELSGDSSGPFMVLKV*EQGRGD Trigger: GTCCCCGCGTCCCTGCTCCAAAACTTTCAGCACCAT...AAAAGGGCCGCTTGAATCGCCGCTCAGCTCTCTTTGTTTCTGCTTTCTGCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR CAA 90 bp | TTATCCATTTTTATTATGATCGGGAACAAGTGCCCATTCGCGTGGGTTTTGTTTGCAGGGCTGTGGCTGTaGCCAGAGTGTCGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSIFIMIGNKCPFAWVLFAGLWL*PECRCG Trigger: CCCGCAGCGACACTCTGGCAACAGCCACAGCCCTGC...AAACAAAACCCACGCGAATGGGCACTTGTTCCCGATCATAATAAAAATGGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS-3UTR CAA 90 bp | CCTAAACACTGGCAAGACAGGTCCTGGGAGGAAGTATATACTGGAGAGCACAGTTCATCCCCTAGCCACTaGCAGATGAGCTCCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKHWQDRSWEEVYTGEHSSSPSH*QMSSCL Trigger: CAAACAGGAGCTCATCTGCAAGTGGCTAGGGGATGA...ACTGTGCTCTCCAGTATATACTTCCTCCCAGGACCTGTCTTGCCAGTGTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| CDS-3UTR CAA 90 bp | AACAAGACAATTAAGGGAACATGGACTTCTAACTTTGCTGCCATCTTCCCCATCATGGTGCTGAAAGTTTaGGAGCAGGGACGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NKTIKGTWTSNFAAIFPIMVLKV*EQGRGD Trigger: GTCCCCGCGTCCCTGCTCCAAAACTTTCAGCACCAT...GATGGGGAAGATGGCAGCAAAGTTAGAAGTCCATGTTCCCTTAATTGTCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 |
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| CDS-3UTR CAA 90 bp | CCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGACACAGCTGCTACCTGTaGTCGAGACAAATAACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVRRKYYVLNEKPGRAPGHSCYL*SRQITC Trigger: GCACGTTATTTGTCTCGACAACAGGTAGCAGCTGTG...TCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS-3UTR CAA 90 bp | CCTGTTAGACGTAAATATTATGTCCTTAATGAAAAGCCTGGACGGGCTCCAGGAGTCCACAGCTGCTACTaGATTCTTTCAGAGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVRRKYYVLNEKPGRAPGVHSCY*ILSECF Trigger: GAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGAC...TCCTGGAGCCCGTCCAGGCTTTTCATTAAGGACATAATATTTACGTCTAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS CCA 72 bp | GGCTGTTGCCAGAGTGTCGCTGCGGGCCATAGGCCCTaGTGCAAAAGGTTCCGACCTCGCATACATGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GCCQSVAAGHRP*CKRFRPRIHVS Trigger: GGAGACATGTATGCGAGGTCGGAACCTTTTGCACCAGGGCCTATGGCCCGCAGCGACACTCTGGCAACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS GCA 72 bp | TGTTGCCAGAGTGTCGCTGCGGGCCATAGGCCCTGGTaGAAAAGGTTCCGACCTCGCATACATGTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CCQSVAAGHRPW*KRFRPRIHVSR Trigger: CCTGGAGACATGTATGCGAGGTCGGAACCTTTTGCACCAGGGCCTATGGCCCGCAGCGACACTCTGGCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS CAA 90 bp | AAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTGCTACCTGTaGTCGAGACAAATAACGTGCATGAGAAGCGGTGGCGTGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KKRRAGAHGVHSCYL*SRQITCMRSGGVGF Trigger: GAAGCCCACGCCACCGCTTCTCATGCACGTTATTTGTCTCGACAACAGGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS GCA 72 bp | GCGCATATAGCGGAAAAAGGCTCCAGGGCCATGGGGTaGGGTGAGGTTCATGGTCAGGTTCATGCCGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: AHIAEKGSRAMG*GEVHGQVHAAI Trigger: TATGGCGGCATGAACCTGACCATGAACCTCACCGCACCCCATGGCCCTGGAGCCTTTTTCCGCTATATGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS CCA 72 bp | ACGGAGGGGTTCGAAGAAGCGGCGAGCTGGGGCCCATaGTGTCCACAGCTGCTACTTGATTCTTTCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TEGFEEAASWGP*CPQLLLDSFRV Trigger: CACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTCGAACCCCTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS CAA 72 bp | CGAGCTGGGGCCCATGGTGTCCACAGCTGCTACCTGTaGTCGAGACAAATAACGTGCATGAGAAGCGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAGAHGVHSCYL*SRQITCMRSGG Trigger: GCCACCGCTTCTCATGCACGTTATTTGTCTCGACAACAGGTAGCAGCTGTGGACACCATGGGCCCCAGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS TCA 72 bp | TATAGCGGAAAAAGGCTCCAGGGCCATGGGGTGCGGTaGGGTTCATGGTCAGGTTCATGCCGCCATAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: YSGKRLQGHGVR*GSWSGSCRHNR Trigger: ACGGTTATGGCGGCATGAACCTGACCATGAACCTCACCGCACCCCATGGCCCTGGAGCCTTTTTCCGCTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS TCA 72 bp | CGTTATAGCCGAGTCGTAGCCAGAGCTGGGTGGCGGTaGGCGACCATGAACTTTCATGTGCTTTCGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RYSRVVARAGWR*ATMNFHVLSQR Trigger: TCTCTGCGAAAGCACATGAAAGTTCATGGTCGCTCACCGCCACCCAGCTCTGGCTACGACTCGGCTATAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066384.7 ENSMUST00000172646.8 ENSMUST00000173933.8 |
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| CDS GCA 72 bp | AAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTaGTACCTGTTGTCGAGACAAATAACGTGCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KKRRAGAHGVHS*YLLSRQITCMR Trigger: TCTCATGCACGTTATTTGTCTCGACAACAGGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066384.7 |
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| CDS CAA 72 bp | CGGCGAGCTGGGGCCCATGGTGTCCACAGCTGCTACTaGATTCTTTCAGAGTGTTTCTGTACAGCCGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: RRAGAHGVHSCY*ILSECFCTAVT Trigger: GGTTACGGCTGTACAGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS CAA 90 bp | TCGAAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTGCTACTaGATTCTTTCAGAGTGTTTCTGTACAGCCGTAACCGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKKRRAGAHGVHSCY*ILSECFCTAVTASS Trigger: TGAGGAAGCGGTTACGGCTGTACAGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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| CDS GCA 72 bp | AAGAAGCGGCGAGCTGGGGCCCATGGTGTCCACAGCTaGTACTTGATTCTTTCAGAGTGTTTCTGTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KKRRAGAHGVHS*YLILSECFCTA Trigger: GGCTGTACAGAAACACTCTGAAAGAATCAAGTAGCAGCTGTGGACACCATGGGCCCCAGCTCGCCGCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000172646.8 ENSMUST00000173054.8 ENSMUST00000173342.8 ENSMUST00000173933.8 ENSMUST00000174212.8 |
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