Pregenerated sensors for ZIC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067860Ensembl transcript IDs: ENSMUST00000088627.11, ENSMUST00000088629.4, ENSMUST00000088631.11, ENSMUST00000137687.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCATAGCTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTaGAGTTACCAAGATGTAGCCCTATATATATGGCCTCTTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: GHSYFWILPQTFLNN*SYQDVALYIWPLAL Trigger: TAAAGCAAGAGGCCATATATATAGGGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAGCTATGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR CCA 90 bp | ACCTTCCTGAACAATTGCAGTTACCAAGATGTAGCCCTATATATATaGCCTCTTGCTTTAAAACTCCATTTCCATCTGATTTGTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TFLNNCSYQDVALYI*PLALKLHFHLICLS Trigger: ACTGAGACAAATCAGATGGAAATGGAGTTTTAAAGCAAGAGGCCATATATATAGGGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR TCA 90 bp | GTTTCGACCCCATTAGACGAAGATACATTCACAAGTGTAATGCTTTaGAGAAAAGTTCAAGACATAACAGGACTTTGGCATGGTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: VSTPLDEDTFTSVML*RKVQDITGLWHGLR Trigger: TCTTAAACCATGCCAAAGTCCTGTTATGTCTTGAACTTTTCTTCAAAGCATTACACTTGTGAATGTATCTTCGTCTAATGGGGTCGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR CCA 90 bp | TGTAATGCTTTGAAGAAAAGTTCAAGACATAACAGGACTTTGGCATaGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATC | + |
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Preference number: 1 (lower is better) Translates to: CNALKKSSRHNRTLA*FKKQSPLRRRRLFI Trigger: GATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCATGCCAAAGTCCTGTTATGTCTTGAACTTTTCTTCAAAGCATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACAGCCTCTCAGTCTTTaGAGTACAAGATTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LALLIAISEVCYPLKLNRQPLSL*STRLRC Trigger: ACATCTCAATCTTGTACTTCAAAGACTGAGAGGCTG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAACCTTCCTGAACAATTaGAGTTACCAAGATGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LALLIAISEVCYPLKLNRTFLNN*SYQDVA Trigger: GGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGT...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGACCTTCCTGAACAATTaGAGTTACCAAGATGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TLTMRSTVQLALLIAISETFLNN*SYQDVA Trigger: GGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGT...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTTAATTAAAATGATTTaGAGGAGTTCCAGAACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLTMRSTVQLALLIAISELIKMI*RSSRTG Trigger: CCCCGTTCTGGAACTCCTTCAAATCATTTTAATTAA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACAGTATTATTTGATTTaGATGCCGAAAATCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LALLIAISEVCYPLKLNRQYYLI*MPKIQD Trigger: GTCCTGGATTTTCGGCATGCAAATCAAATAATACTG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAAACAGGACTTTGGCATaGTTTAAGAAACAATCACCA | + |
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Preference number: 2 (lower is better) Translates to: LALLIAISEVCYPLKLNRNRTLA*FKKQSP Trigger: TGGTGATTGTTTCTTAAACCATGCCAAAGTCCTGTT...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGAAGATTGAGATGTCATaGCCACTAAGTGAATTGATC | + |
|
Preference number: 2 (lower is better) Translates to: TLTMRSTVQLALLIAISEKIEMS*PLSELI Trigger: GATCAATTCACTTAGTGGCCATGACATCTCAATCTT...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR CAA 90 bp | TTTTTAAGAAGCACTTTAACCATGAGAAGCACTGTTCAACTGGCCTaGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: FLRSTLTMRSTVQLA*LIAISEVCYPLKLN Trigger: ATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGTGCTTCTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACATGCCCCAAACCTTCCTaGACAATTGCAGTTACCAAG | + |
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Preference number: 2 (lower is better) Translates to: WFKKQSPLRRRRLFISLTCPKPS*TIAVTK Trigger: CTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCA...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGACATAACAGGACTTTaGCATGGTTTAAGAAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: LALLIAISEVCYPLKLNRDITGL*HGLRNN Trigger: ATTGTTTCTTAAACCATGCCAAAGTCCTGTTATGTC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR CAA 90 bp | CACAAGTGTAATGCTTTGAAGAAAAGTTCAAGACATAACAGGACTTaGGCATGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: HKCNALKKSSRHNRT*AWFKKQSPLRRRRL Trigger: AAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCATGCCAAAGTCCTGTTATGTCTTGAACTTTTCTTCAAAGCATTACACTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR CAA 90 bp | AGTTTCGACCCCATTAGACGAAGATACATTCACAAGTGTAATGCTTaGAAGAAAAGTTCAAGACATAACAGGACTTTGGCATGGTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFDPIRRRYIHKCNA*KKSSRHNRTLAWFK Trigger: CTTAAACCATGCCAAAGTCCTGTTATGTCTTGAACTTTTCTTCAAAGCATTACACTTGTGAATGTATCTTCGTCTAATGGGGTCGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACATTAATTAAAATGATTTaGAGGAGTTCCAGAACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WFKKQSPLRRRRLFISLTLIKMI*RSSRTG Trigger: CCCCGTTCTGGAACTCCTTCAAATCATTTTAATTAA...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR TCA 72 bp | TTGCAACAGTGCATGAGAATTGTGCCTACTGGCTTCTaGACAGGGTCCCTCGTCACCAGCATCTTCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: LQQCMRIVPTGF*TGSLVTSIFPF Trigger: AAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGCACAATTCTCATGCACTGTTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| 3UTR CCA 72 bp | AAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTaGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: KRFATVHENCAY*LLNRVPRHQHL Trigger: AAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGCCAGCCTCTCAGTCTTaGAAGTACAAGATTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: TLTMRSTVQLALLIAISEPASQS*KYKIEM Trigger: CATCTCAATCTTGTACTTCAAAGACTGAGAGGCTGG...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR GCA 72 bp | GTTCAACTGGCCTTGCTCATTGCCATTTCAGAGGTGTaGTATCCTTTGAAGCTAAATAGATTTGATAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VQLALLIAISEV*YPLKLNRFDRQ Trigger: CTGCCTATCAAATCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAGTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR GCA 72 bp | TACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTaGAGTTACCAAGATGTAGCCCTATATATATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: YFWILPQTFLNN*SYQDVALYIWP Trigger: AGGCCATATATATAGGGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CAA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGAGACATAACAGGACTTaGGCATGGTTTAAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLTMRSTVQLALLIAISERHNRT*AWFKKQ Trigger: TTGTTTCTTAAACCATGCCAAAGTCCTGTTATGTCT...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CAA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTCAGTATTATTTGATTaGCATGCCGAAAATCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: TLTMRSTVQLALLIAISESVLFD*HAENPG Trigger: TCCTGGATTTTCGGCATGCAAATCAAATAATACTGA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| 3UTR-3UTR CAA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAAACCTTCCTGAACAATaGCAGTTACCAAGATGTAGC | + |
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Preference number: 3 (lower is better) Translates to: WFKKQSPLRRRRLFISLTNLPEQ*QLPRCS Trigger: GCTACATCTTGGTAACTGCAATTGTTCAGGAAGGTT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS-3UTR CCA 90 bp | GCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAAAAGGCGCCCGGCCCGTaGTGGGCCGCCACGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: AYWLLNRVPRHQHLPIYKKAPGP*WAATFT Trigger: CGTGAACGTGGCGGCCCACCACGGGCCGGGCGCCTT...TTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | GCAACAGTGCATGAGAATTGTGCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCGGTTGGGCATCTCGTaGTGGCGCGGAGCACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: ATVHENCAYWLLNRVPRHRLGIS*WRGAPK Trigger: CTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCG...GTGACGAGGGACCCTGTTCAGAAGCCAGTAGGCACAATTCTCATGCACTGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR TCA 90 bp | GCAACAGTGCATGAGAATTGTGCCTACTGGCTTCTGAACAGGGTCCCTCGTCACGGCCGCAGCGTGGGTTaGGTCCCCGAAGGGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: ATVHENCAYWLLNRVPRHGRSVG*VPEGIQ Trigger: TTGAATCCCTTCGGGGACTCAACCCACGCTGCGGCC...GTGACGAGGGACCCTGTTCAGAAGCCAGTAGGCACAATTCTCATGCACTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | TACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAATCCGCGGCGGCCGCAGCGTaGGTTGAGTCCCCGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YWLLNRVPRHQHLPIYKSAAAAA*VESPKG Trigger: TCCCTTCGGGGACTCAACCCACGCTGCGGCCGCCGC...GGATTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | TACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAATCCTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: YWLLNRVPRHQHLPIYKSCPRAL*ATGAQR Trigger: GCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACA...GGATTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR TCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTGGCTGGGCTCAGCTTaGAGGCAGCGGCGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEWLGSA*RQRRQR Trigger: CCGCTGCCGCCGCTGCCTTCAAGCTGAGCCCAGCCA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR GCA 90 bp | TCCCTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTCCCAACCCAGGGAACTaGGGGCCTCCGTCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLVTSIFPFINPKLVGKPPNPGN*GPPSRS Trigger: GCTCCTGGACGGAGGCCCGCAGTTCCCTGGGTTGGG...AGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGCGGCGGCCGCAGCGTaGGTTGAGTCCCCGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRAAAAA*VESPKG Trigger: TCCCTTCGGGGACTCAACCCACGCTGCGGCCGCCGC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR CCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTAAGGCGCCCGGCCCGTaGTGGGCCGCCACGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCKAPGP*WAATFT Trigger: CGTGAACGTGGCGGCCCACCACGGGCCGGGCGCCTT...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS-3UTR TCA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGGCTGGGCTCAGCTTaGAGGCAGCGGCGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LVTSIFPFINPKLVGKPFWLGSA*RQRRQR Trigger: CCGCTGCCGCCGCTGCCTTCAAGCTGAGCCCAGCCA...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR TCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTCGGAGGCTGCCTCGCTaGGCCCAGAACCGCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCRRLPR*AQNRAD Trigger: GTCAGCGCGGTTCTGGGCTCAGCGAGGCAGCCTCCG...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR TCA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTCGGAGGCTGCCTCGCTaGGCCCAGAACCGCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LVTSIFPFINPKLVGKPFRRLPR*AQNRAD Trigger: GTCAGCGCGGTTCTGGGCTCAGCGAGGCAGCCTCCG...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR TCA 90 bp | GCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAATTGGGCCGGCTCAGCTaGGCCTCCTCGATCCACTTA | + |
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Preference number: 4 (lower is better) Translates to: AYWLLNRVPRHQHLPIYKLGRLS*ASSIHL Trigger: TAAGTGGATCGAGGAGGCTCAGCTGAGCCGGCCCAA...TTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACTGCAGGCTCGCGGTTaGGCATCTCGTGGTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRLQARG*ASRGGA Trigger: CGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR CCA 90 bp | GCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAAAGGTGGGCACCTGGCTaGCGTGATGGTGGTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: AYWLLNRVPRHQHLPIYKRWAPG*RDGGDG Trigger: ACCATCACCACCATCACGCCAGCCAGGTGCCCACCT...TTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCCPRAL*ATGAQR Trigger: GCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACA...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACTGAACCCTGCGGTGTaGACGCTGAGCTCTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRLNPAV*TLSSGP Trigger: CGGGCCAGAGCTCAGCGTTCACACCGCAGGGTTCAG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR TCA 90 bp | GCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAAGGCATTGGCATAACCTaGACCCTGCGGTGTGAACGC | + |
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Preference number: 4 (lower is better) Translates to: AYWLLNRVPRHQHLPIYKGIGIT*TLRCER Trigger: GCGTTCACACCGCAGGGTTCAGGTTATGCCAATGCC...TTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGCGGTTGGGCATCTCGTaGTGGCGCGGAGCACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISERLGIS*WRGAPK Trigger: CTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCG...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGGCCGCAGCGTGGGTTaGGTCCCCGAAGGGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRGRSVG*VPEGIQ Trigger: TTGAATCCCTTCGGGGACTCAACCCACGCTGCGGCC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
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| CDS-3UTR GCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGCGGAGCACCGAAGCTaGCCACTCCCAACCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCAEHRS*PLPTQG Trigger: TCCCTGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTGGTTGTTGTCCACGTaGCCTGTGGGCGACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEWLLST*PVGDGC Trigger: GCACCCGTCGCCCACAGGGCACGTGGACAACAACCA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTTGGGCATCTCGTGGTaGCGCGGAGCACCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISELGISW*RGAPKL Trigger: CAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACCGCGCAGCCCCAGATaGACCTGGTTGTTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRPRSPR*TWLLST Trigger: CGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGGTCGCAGCTCTTCTTaGGCCGGCTCAGCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRGRSSS*AGSAEP Trigger: AGGCTCAGCTGAGCCGGCCCAAGAAGAGCTGCGACC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGATACCAGCTGGAGCGTaGAGACTGCTCGCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEIPAGA*RLLAEP Trigger: TGGCTCGGCGAGCAGTCTTCACGCTCCAGCTGGTAT...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR TCA 90 bp | TACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAATCCGTTTGTACTTCGCCTTaGAGGACTTGCCTTCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YWLLNRVPRHQHLPIYKSVCTSP*RTCLRG Trigger: CCCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAAC...GGATTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGGTTGTTGTCCACGTaGCCTGTGGGCGACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVTSIFPFINPKLVGKPFWLLST*PVGDGC Trigger: GCACCCGTCGCCCACAGGGCACGTGGACAACAACCA...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAAAGGCGCCCGGCCCGTaGTGGGCCGCCACGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTKAPGP*WAATFT Trigger: CGTGAACGTGGCGGCCCACCACGGGCCGGGCGCCTT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGGCATTGGCATAACCTaGACCCTGCGGTGTGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRGIGIT*TLRCER Trigger: GCGTTCACACCGCAGGGTTCAGGTTATGCCAATGCC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTTTGGGCCGGCTCAGCTaGGCCTCCTCGATCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCLGRLS*ASSIHL Trigger: TAAGTGGATCGAGGAGGCTCAGCTGAGCCGGCCCAA...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | ACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGCTTTGCGGAGCACCGAAGCTaGCCACTCCCAACCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSIFPFINPKLVGKPFCFAEHRS*PLPTQG Trigger: TCCCTGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGC...AAAGCAAAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAAGGGATTCAATCCCATaGCTGCAGGCTCGCGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRRDSIP*LQARGW Trigger: CCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCT...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CCA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCGGTCGCAGCTCTTCTTaGGCCGGCTCAGCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQILERDLQQCMRIVPTGGRSSS*AGSAEP Trigger: AGGCTCAGCTGAGCCGGCCCAAGAAGAGCTGCGACC...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR TCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTACTCATGCATGGTGCTaGAGGTCCGGTCGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCTHAWC*RSGRSS Trigger: AGAGCTGCGACCGGACCTTCAGCACCATGCATGAGT...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGGTTTGTACTTCGCCTTaGAGGACTTGCCTTCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEVCTSP*RTCLRG Trigger: CCCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAAC...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGGAAGATTCATAGCCTaGACTGGCAGCAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRGRFIA*TGSRGG Trigger: TCCTCCCCTGCTGCCAGTTCAGGCTATGAATCTTCC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACACCCAACCCAGGGAACTaGGGGCCTCCGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTPNPGN*GPPSRS Trigger: GCTCCTGGACGGAGGCCCGCAGTTCCCTGGGTTGGG...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTTACAGGACAGCTCCTaGTTGATGGGCTGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISELQDSS*LMGCRM Trigger: CATGCGGCAGCCCATCAAGCAGGAGCTGTCCTGTAA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | GCCTACTGGCTTCTGAACAGGGTCCCTCGTCACCAGCATCTTCCCATTTATAAATGGAGGACTGGTTGCTaGATACCAACGTCAGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: AYWLLNRVPRHQHLPIYKWRTGC*IPTSVS Trigger: TGATACTGACGTTGGTATGCAGCAACCAGTCCTCCA...TTTATAAATGGGAAGATGCTGGTGACGAGGGACCCTGTTCAGAAGCCAGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CCA 90 bp | AGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGTTGGGCATCTCGTGGTaGCGCGGAGCACCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSDIRKRFATVHENCAYWLGISW*RGAPKL Trigger: CAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAA...CCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CCA 90 bp | AGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCCGCGCAGCCCCAGATaGACCTGGTTGTTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSDIRKRFATVHENCAYWPRSPR*TWLLST Trigger: CGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGG...CCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR TCA 90 bp | ACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGCTTTATACCAGCTGGAGCGTaGAGACTGCTCGCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSIFPFINPKLVGKPFCFIPAGA*RLLAEP Trigger: TGGCTCGGCGAGCAGTCTTCACGCTCCAGCTGGTAT...AAAGCAAAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR TCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGTTTGTACTTCGCCTTaGAGGACTTGCCTTCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCVCTSP*RTCLRG Trigger: CCCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAAC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTATTCAATCCCATGCCTaGAGGCTCGCGGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCIQSHA*RLAVGH Trigger: ATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAAT...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR GCA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCAGGGATTCAATCCCATaGCTGCAGGCTCGCGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQILERDLQQCMRIVPTGRDSIP*LQARGW Trigger: CCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCT...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTTTACAGGACAGCTCCTaGTTGATGGGCTGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCLQDSS*LMGCRM Trigger: CATGCGGCAGCCCATCAAGCAGGAGCTGTCCTGTAA...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTGCGTAACCAACTCATaGATGGTGCTGAAGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISECVTNS*MVLKVR Trigger: CCGGACCTTCAGCACCATGCATGAGTTGGTTACGCA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGATGCGTAACCAACTCATaGATGGTGCTGAAGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRCVTNS*MVLKVR Trigger: CCGGACCTTCAGCACCATGCATGAGTTGGTTACGCA...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGGTTTCTCGCCAGTGTaGACTCGGATATGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRGFSPV*TRIWLT Trigger: GGTCAACCATATCCGAGTGCACACTGGCGAGAAACC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | ACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGCTTTACTCATGCATGGTGCTaGAGGTCCGGTCGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSIFPFINPKLVGKPFCFTHAWC*RSGRSS Trigger: AGAGCTGCGACCGGACCTTCAGCACCATGCATGAGT...AAAGCAAAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGGTTTCTCGCCAGTGTaGACTCGGATATGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCGFSPV*TRIWLT Trigger: GGTCAACCATATCCGAGTGCACACTGGCGAGAAACC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAGGTCGCAGCTCTTCTTaGGCCGGCTCAGCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTGRSSS*AGSAEP Trigger: AGGCTCAGCTGAGCCGGCCCAAGAAGAGCTGCGACC...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACATTGGGCCGGCTCAGCTaGGCCTCCTCGATCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTLGRLS*ASSIHL Trigger: TAAGTGGATCGAGGAGGCTCAGCTGAGCCGGCCCAA...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGCACTCGGATATGGTTaGCCAGTTTGTACTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCALGYG*PVCTSP Trigger: AGGCGAAGTACAAACTGGTCAACCATATCCGAGTGC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTGCACTCGGATATGGTTaGCCAGTTTGTACTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTSIFPFINPKLVGKPFALGYG*PVCTSP Trigger: AGGCGAAGTACAAACTGGTCAACCATATCCGAGTGC...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR TCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTGGCTGGTGCTAGTTTaGACTGCAGAAGGGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEWLVLV*TAEGVL Trigger: TAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGATGGCTGGTGCTAGTTTaGACTGCAGAAGGGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRWLVLV*TAEGVL Trigger: TAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCA...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | GCATCAGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTTTACAGGACAGCTCCTaGTTGATGGGCTGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASDQILERDLQQCMRIVPLQDSS*LMGCRM Trigger: CATGCGGCAGCCCATCAAGCAGGAGCTGTCCTGTAA...AGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCTGCGTAACCAACTCATaGATGGTGCTGAAGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DQILERDLQQCMRIVPTGCVTNS*MVLKVR Trigger: CCGGACCTTCAGCACCATGCATGAGTTGGTTACGCA...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAAGGTGGGCACCTGGCTaGCGTGATGGTGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTRWAPG*RDGGDG Trigger: ACCATCACCACCATCACGCCAGCCAGGTGCCCACCT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGAGAAGCTATAGCGGGTaGAGTGGAAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISERSYSG*SGRFIA Trigger: GGCTATGAATCTTCCACTCCACCCGCTATAGCTTCT...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAACTCATGCATGGTGCTaGAGGTCCGGTCGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTTHAWC*RSGRSS Trigger: AGAGCTGCGACCGGACCTTCAGCACCATGCATGAGT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGATGCTCCATGGTAACATaGGTAACCAACTCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LALLIAISEVCYPLKLNRCSMVT*VTNSCM Trigger: CATGCATGAGTTGGTTACGCATGTTACCATGGAGCA...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | GCATCAGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTGGTTTCTCGCCAGTGTaGACTCGGATATGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASDQILERDLQQCMRIVPGFSPV*TRIWLT Trigger: GGTCAACCATATCCGAGTGCACACTGGCGAGAAACC...AGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGGGTATCTTTACTGTTTaGAGAAGCTATAGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTMRSTVQLALLIAISEGIFTV*RSYSGW Trigger: CCACCCGCTATAGCTTCTGCAAACAGTAAAGATACC...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAGGAAGATTCATAGCCTaGACTGGCAGCAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTGRFIA*TGSRGG Trigger: TCCTCCCCTGCTGCCAGTTCAGGCTATGAATCTTCC...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTTATGGAGGACTGGTTaGTGCATACCAACGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVTSIFPFINPKLVGKPFLWRTG*CIPTSV Trigger: TACTGACGTTGGTATGCAGCAACCAGTCCTCCATAA...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR GCA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGGTATCTTTACTGTTTaGAGAAGCTATAGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCGIFTV*RSYSGW Trigger: CCACCCGCTATAGCTTCTGCAAACAGTAAAGATACC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CCA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCAGTGTTATGGAGGACTaGTTGCTGCATACCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQILERDLQQCMRIVPTGSVMED*LLHTNV Trigger: GACGTTGGTATGCAGCAACCAGTCCTCCATAACACT...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| 3UTR CAA 72 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATaGCAGTTACCAAGATGTAGCCCTATATATATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAPNLPEQ*QLPRCSPIYMA Trigger: GGCCATATATATAGGGCTACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| 3UTR CAA 72 bp | GCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTaGAAGCTAAATAGATTTGATAGGCAGATTAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLIAISEVCYP*KLNRFDRQIRY Trigger: GTACCTAATCTGCCTATCAAATCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR TCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAGCACTCGGATATGGTTaGCCAGTTTGTACTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTALGYG*PVCTSP Trigger: AGGCGAAGTACAAACTGGTCAACCATATCCGAGTGC...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | GCATCAGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTTGCTCCATGGTAACATaGGTAACCAACTCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASDQILERDLQQCMRIVPCSMVT*VTNSCM Trigger: CATGCATGAGTTGGTTACGCATGTTACCATGGAGCA...AGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCTGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAAGAAGCTATAGCGGGTaGAGTGGAAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTRSYSG*SGRFIA Trigger: GGCTATGAATCTTCCACTCCACCCGCTATAGCTTCT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACATGCTCCATGGTAACATaGGTAACCAACTCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WFKKQSPLRRRRLFISLTCSMVT*VTNSCM Trigger: CATGCATGAGTTGGTTACGCATGTTACCATGGAGCA...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS CCA 90 bp | GGGTCTGCACGGCCAAATAGCTCCCCGCGCAGCCCCAGATGGACCTaGTTGTTGTCCACGTGCCCTGTGGGCGACGGGTGCCCAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSARPNSSPRSPRWT*LLSTCPVGDGCPAP Trigger: GGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGGGGAGCTATTTGGCCGTGCAGACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS GCA 90 bp | CGGCGGCCGCAGCGTGGGTTGAGTCCCCGAAGGGATTCAATCCCATaGCTGCAGGCTCGCGGTTGGGCATCTCGTGGTGGCGCGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRPQRGLSPRRDSIP*LQARGWASRGGAEH Trigger: GTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCGGGGACTCAACCCACGCTGCGGCCGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
||
| CDS CCA 90 bp | CGGTATGGGTCTGCACGGCCAAATAGCTCCCCGCGCAGCCCCAGATaGACCTGGTTGTTGTCCACGTGCCCTGTGGGCGACGGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYGSARPNSSPRSPR*TWLLSTCPVGDGCP Trigger: TGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGGGGAGCTATTTGGCCGTGCAGACCCATACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS CCA 90 bp | GGATTCAATCCCATGCCTGCAGGCTCGCGGTTGGGCATCTCGTGGTaGCGCGGAGCACCGAAGCTGCCCACTCCCAACCCAGGGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFNPMPAGSRLGISW*RGAPKLPTPNPGNC Trigger: GCAGTTCCCTGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
||
| CDS CCA 90 bp | AAGGGATTCAATCCCATGCCTGCAGGCTCGCGGTTGGGCATCTCGTaGTGGCGCGGAGCACCGAAGCTGCCCACTCCCAACCCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGFNPMPAGSRLGIS*WRGAPKLPTPNPGN Trigger: GTTCCCTGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
||
| CDS CCA 90 bp | TTGAGTCCCCGAAGGGATTCAATCCCATGCCTGCAGGCTCGCGGTTaGGCATCTCGTGGTGGCGCGGAGCACCGAAGCTGCCCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPRRDSIPCLQARG*ASRGGAEHRSCPLP Trigger: TGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCGGGGACTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS CCA 90 bp | AAGCCCAGGAAAGAGCAAGTAGCTAGGAGGCTCAGGAATACCAGCTaGAGCGTGAAGACTGCTCGCCGAGCCAGCGAAAAGCCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRKEQVARRLRNTS*SVKTARRASEKPVL Trigger: CAGCACGGGCTTTTCGCTGGCTCGGCGAGCAGTCTTCACGCTCCAGCTGGTATTCCTGAGCCTCCTAGCTACTTGCTCTTTCCTGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGACCTGCAGGCTCGCGGTaGGGCATCTCGTGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LALLIAISEVCYPLKLNRPAGSR*GISWWR Trigger: GCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGG...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAGTGGCTGGGCTCAGCTaGAAGGCAGCGGCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LALLIAISEVCYPLKLNRVAGLS*KAAAAA Trigger: CGCTGCCGCCGCTGCCTTCAAGCTGAGCCCAGCCAC...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CAA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTCCTGCAGGCTCGCGGTaGGGCATCTCGTGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVTSIFPFINPKLVGKPFPAGSR*GISWWR Trigger: GCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGG...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGCGGCCGCAGCGTGGGTaGAGTCCCCGAAGGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLTMRSTVQLALLIAISERPQRG*SPRRDS Trigger: TGAATCCCTTCGGGGACTCAACCCACGCTGCGGCCG...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CAA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCCGGCCGCAGCGTGGGTaGAGTCCCCGAAGGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: DQILERDLQQCMRIVPTGRPQRG*SPRRDS Trigger: TGAATCCCTTCGGGGACTCAACCCACGCTGCGGCCG...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAAGATGGACCTGGTTGTaGTCCACGTGCCCTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LALLIAISEVCYPLKLNRRWTWL*STCPVG Trigger: GCCCACAGGGCACGTGGACAACAACCAGGTCCATCT...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CAA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTCCCAGATGGACCTGGTaGTTGTCCACGTGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCPRWTW*LSTCPV Trigger: CACAGGGCACGTGGACAACAACCAGGTCCATCTGGG...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088627.11 |
||
| CDS-3UTR CAA 90 bp | ACTTTAACCATGAGAAGCACTGTTCAACTGGCCTTGCTCATTGCCATTTCAGAGTTCGCCTTGAAGGACTaGCCTTCGCGGGGACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLTMRSTVQLALLIAISEFALKD*PSRGHS Trigger: GGAATGTCCCCGCGAAGGCAAGTCCTTCAAGGCGAA...CTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCTTCTCATGGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS-3UTR CAA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTTCGCCTTGAAGGACTaGCCTTCGCGGGGACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVTSIFPFINPKLVGKPFFALKD*PSRGHS Trigger: GGAATGTCCCCGCGAAGGCAAGTCCTTCAAGGCGAA...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CAA 90 bp | AGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGAGATGGACCTGGTTGTaGTCCACGTGCCCTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSDIRKRFATVHENCAYWRWTWL*STCPVG Trigger: GCCCACAGGGCACGTGGACAACAACCAGGTCCATCT...CCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | GCATCAGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTCCCAGATGGACCTGGTaGTTGTCCACGTGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASDQILERDLQQCMRIVPPRWTW*LSTCPV Trigger: CACAGGGCACGTGGACAACAACCAGGTCCATCTGGG...AGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCTGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS-3UTR CAA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGAAGTTTGTACTTCGCCTaGAAGGACTTGCCTTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LALLIAISEVCYPLKLNRSLYFA*KDLPSR Trigger: CCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAACT...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS-3UTR CAA 90 bp | GATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGCAGTTTGTACTTCGCCTaGAAGGACTTGCCTTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DQILERDLQQCMRIVPTGSLYFA*KDLPSR Trigger: CCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAACT...GCCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | ACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTTGCTTTCAACACTTCATGTGTTaGCGCAGGGAGCTCGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSIFPFINPKLVGKPFCFQHFMC*RRELGC Trigger: ACACCCGAGCTCCCTGCGCAAACACATGAAGTGTTG...AAAGCAAAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | CTCGTCACCAGCATCTTCCCATTTATAAATCCTAAATTGGTGGGGAAGCCTTTTGTTATGGAGGACTGGTaGCTGCATACCAACGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVTSIFPFINPKLVGKPFVMEDW*LHTNVS Trigger: ACTGACGTTGGTATGCAGCAACCAGTCCTCCATAAC...AAAAGGCTTCCCCACCAATTTAGGATTTATAAATGGGAAGATGCTGGTGACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | CTACTTTTGGATCTTGCCCCAAACCTTCCTGAACAATTGCAGTTACCAAGATGTGTGGCTGGTGCTAGTTaGAACTGCAGAAGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLDLAPNLPEQLQLPRCVAGAS*NCRRGF Trigger: AAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCAC...ACATCTTGGTAACTGCAATTGTTCAGGAAGGTTTGGGGCAAGATCCAAAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTTGCTCATTGCCATTTCAGAGGTGTGCTATCCTTTGAAGCTAAATAGATACCATTCGTTAAAATaGGGAGGAAGTCCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LALLIAISEVCYPLKLNRYHSLK*GGSPGL Trigger: CAACCCTGGACTTCCTCCCAATTTTAACGAATGGTA...TCTATTTAGCTTCAAAGGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CAA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAAGTTTGTACTTCGCCTaGAAGGACTTGCCTTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WFKKQSPLRRRRLFISLTSLYFA*KDLPSR Trigger: CCGCGAAGGCAAGTCCTTCAAGGCGAAGTACAAACT...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CAA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACAGTGGCTGGTGCTAGTTaGAACTGCAGAAGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WFKKQSPLRRRRLFISLTVAGAS*NCRRGF Trigger: AAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCAC...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS-3UTR CAA 90 bp | AGATCAGATATTAGAAAGAGATTTGCAACAGTGCATGAGAATTGTGCCTACTGGTCAGTAAATCATTTCTaGCACAGTAGGTTCGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RSDIRKRFATVHENCAYWSVNHF*HSRFGI Trigger: AATGCCGAACCTACTGTGCAAGAAATGATTTACTGA...CCAGTAGGCACAATTCTCATGCACTGTTGCAAATCTCTTTCTAATATCTGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
||
| CDS-3UTR CAA 90 bp | TGGTTTAAGAAACAATCACCACTAAGGCGAAGAAGACTTTTCATCAGTTTAACATACCATTCGTTAAAATaGGGAGGAAGTCCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WFKKQSPLRRRRLFISLTYHSLK*GGSPGL Trigger: CAACCCTGGACTTCCTCCCAATTTTAACGAATGGTA...TGTTAAACTGATGAAAAGTCTTCTTCGCCTTAGTGGTGATTGTTTCTTAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
||
| CDS GCA 72 bp | CCGCGCAGCCCCAGATGGACCTGGTTGTTGTCCACGTaGCCTGTGGGCGACGGGTGCCCAGCGCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSPRWTWLLST*PVGDGCPAPCS Trigger: TGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS CAA 90 bp | GCACGGCCAAATAGCTCCCCGCGCAGCCCCAGATGGACCTGGTTGTaGTCCACGTGCCCTGTGGGCGACGGGTGCCCAGCGCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ARPNSSPRSPRWTWL*STCPVGDGCPAPCS Trigger: TGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGGGGAGCTATTTGGCCGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS CAA 90 bp | TCTGCACGGCCAAATAGCTCCCCGCGCAGCCCCAGATGGACCTGGTaGTTGTCCACGTGCCCTGTGGGCGACGGGTGCCCAGCGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SARPNSSPRSPRWTW*LSTCPVGDGCPAPC Trigger: GCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGGGGAGCTATTTGGCCGTGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
||
| CDS GCA 72 bp | GGTTGGGCATCTCGTGGTGGCGCGGAGCACCGAAGCTaGCCACTCCCAACCCAGGGAACTGCGGGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GWASRGGAEHRS*PLPTQGTAGLR Trigger: ACGGAGGCCCGCAGTTCCCTGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
||
| CDS CCA 72 bp | CCCATGCCTGCAGGCTCGCGGTTGGGCATCTCGTGGTaGCGCGGAGCACCGAAGCTGCCCACTCCCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: PMPAGSRLGISW*RGAPKLPTPNP Trigger: TGGGTTGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
||
| CDS CCA 72 bp | GCCCCAGATGGACCTGGTTGTTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGCCCTGCTCATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: APDGPGCCPRAL*ATGAQRPAHEA Trigger: GGCTTCATGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
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| CDS CCA 72 bp | AATCCCATGCCTGCAGGCTCGCGGTTGGGCATCTCGTaGTGGCGCGGAGCACCGAAGCTGCCCACTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NPMPAGSRLGIS*WRGAPKLPTPN Trigger: GTTGGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS CAA 90 bp | GTTGAGTCCCCGAAGGGATTCAATCCCATGCCTGCAGGCTCGCGGTaGGGCATCTCGTGGTGGCGCGGAGCACCGAAGCTGCCCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VESPKGFNPMPAGSR*GISWWRGAPKLPTP Trigger: GGGAGTGGGCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCGGGGACTCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS CCA 72 bp | CGAAGGGATTCAATCCCATGCCTGCAGGCTCGCGGTTaGGCATCTCGTGGTGGCGCGGAGCACCGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRDSIPCLQARG*ASRGGAEHRSC Trigger: GCAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS CCA 72 bp | TCTGCACGGCCAAATAGCTCCCCGCGCAGCCCCAGATaGACCTGGTTGTTGTCCACGTGCCCTGTGGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: SARPNSSPRSPR*TWLLSTCPVGD Trigger: GTCGCCCACAGGGCACGTGGACAACAACCAGGTCCATCTGGGGCTGCGCGGGGAGCTATTTGGCCGTGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
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| CDS CAA 72 bp | CCGAAGGGATTCAATCCCATGCCTGCAGGCTCGCGGTaGGGCATCTCGTGGTGGCGCGGAGCACCGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PKGFNPMPAGSR*GISWWRGAPKL Trigger: CAGCTTCGGTGCTCCGCGCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS GCA 72 bp | CAGCGTGGGTTGAGTCCCCGAAGGGATTCAATCCCATaGCTGCAGGCTCGCGGTTGGGCATCTCGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QRGLSPRRDSIP*LQARGWASRGG Trigger: GCCACCACGAGATGCCCAACCGCGAGCCTGCAGGCATGGGATTGAATCCCTTCGGGGACTCAACCCACGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 ENSMUST00000137687.2 |
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| CDS CCA 72 bp | AAAGAGCAAGTAGCTAGGAGGCTCAGGAATACCAGCTaGAGCGTGAAGACTGCTCGCCGAGCCAGCGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: KEQVARRLRNTS*SVKTARRASEK Trigger: CTTTTCGCTGGCTCGGCGAGCAGTCTTCACGCTCCAGCTGGTATTCCTGAGCCTCCTAGCTACTTGCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088629.4 |
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| CDS GCA 72 bp | AGGAAGTCCAGGGTTGTGGCTGGTGCTAGTTTGAACTaGAGAAGGGGTTTTAGTGGTATCTTTACTGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RKSRVVAGASLN*RRGFSGIFTVC Trigger: GCAAACAGTAAAGATACCACTAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCACAACCCTGGACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS CAA 72 bp | ATTGGGAGGAAGTCCAGGGTTGTGGCTGGTGCTAGTTaGAACTGCAGAAGGGGTTTTAGTGGTATCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: IGRKSRVVAGAS*NCRRGFSGIFT Trigger: AGTAAAGATACCACTAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCACAACCCTGGACTTCCTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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| CDS CAA 72 bp | CCTGCATTTAGGATAGGAAGTGTTATGGAGGACTGGTaGCTGCATACCAACGTCAGTATCAAGTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PAFRIGSVMEDW*LHTNVSIKFFI Trigger: GATGAAGAACTTGATACTGACGTTGGTATGCAGCAACCAGTCCTCCATAACACTTCCTATCCTAAATGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088629.4 |
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| CDS GCA 72 bp | AACTGCAGAAGGGGTTTTAGTGGTATCTTTACTGTTTaGAGAAGCTATAGCGGGTGGAGTGGAAGATTCATA | + |
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Preference number: 6 (lower is better) Translates to: NCRRGFSGIFTV*RSYSGWSGRFI Trigger: TATGAATCTTCCACTCCACCCGCTATAGCTTCTGCAAACAGTAAAGATACCACTAAAACCCCTTCTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088627.11 ENSMUST00000088631.11 |
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