Pregenerated sensors for ZIC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032368Ensembl transcript IDs: ENSMUST00000034927.13, ENSMUST00000065360.5
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTTaGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: QRACSDPTRNWPWGL*RCSVRQPPSLPPPS Trigger: GGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCAAAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR CCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTaGGGCCTTTGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LKPQRACSDPTRNWP*GLWRCSVRQPPSLP Trigger: TGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCAAAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR TCA 90 bp | GCAGGACATACAGAGGACAGTGGAGAAGCAGAATCATGCTTCCCCTaGCTCCTAACACATCTACACCCCTGCAGCCATAGCCAAGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: AGHTEDSGEAESCFP*LLTHLHPCSHSQGP Trigger: AGGCCCTTGGCTATGGCTGCAGGGGTGTAGATGTGTTAGGAGTCAGGGGAAGCATGATTCTGCTTCTCCACTGTCCTCTGTATGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR GCA 90 bp | CTTCCTGTGTTTAATGTTGGGCTCACTGTCTACTGTCACTTTAAATaGAACACTGTTGATCAGTCTTCAACCTCCAAAGCTACTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: LPVFNVGLTVYCHFK*NTVDQSSTSKATEI Trigger: GATCTCAGTAGCTTTGGAGGTTGAAGACTGATCAACAGTGTTGCATTTAAAGTGACAGTAGACAGTGAGCCCAACATTAAACACAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR GCA 90 bp | CTCGTACTATACGAATTCTTGACAGGACATGAAACAACATTTTACTaGACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: LVLYEFLTGHETTFY*TKVLRLWDEMFALY Trigger: ATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTGTTTCATGTCCTGTCAAGAATTCGTATAGTACGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGAGACAAAGAAACCAGCATCCCTACCAGAGAACCTAACTTCTCCGAAGACAAATGGAACAGTTTaGCACGTAGATCCAGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: QQETKKPASLPENLTSPKTNGTV*HVDPGS Trigger: CGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGT...CTTCGGAGAAGTTAGGTTCTCTGGTAGGGATGCTGGTTTCTTTGTCTCTTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR GCA 90 bp | CAACAAGAGACAAAGAAACCAGCATCCCTACCAGAGAACCTAACTTCTCCGAAGAACCTAAAGGCTTGCTaGCTCCTCTGTTTTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: QQETKKPASLPENLTSPKNLKAC*LLCFTQ Trigger: CTGAGTAAAACAGAGGAGGCAGCAAGCCTTTAGGTT...CTTCGGAGAAGTTAGGTTCTCTGGTAGGGATGCTGGTTTCTTTGTCTCTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR GCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGAAACCTAAAGGCTTGCTaGCTCCTCTGTTTTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGNLKAC*LLCFTQ Trigger: CTGAGTAAAACAGAGGAGGCAGCAAGCCTTTAGGTT...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGAAAAGTACTCAGACTTTaGGACGAAATGTTTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGKVLRL*DEMFAL Trigger: AAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTT...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR CAA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTaGACAGGACATGAAACAACATTTTACTGCACTAAAGTACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: WNSLTRRSRLVLYEF*TGHETTFYCTKVLR Trigger: TCTGAGTACTTTAGTGCAGTAAAATGTTGTTTCATGTCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATACCAGAGAGCTTGTTCTaGTCCAACAAGAAATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HFTALKYSDFGTKCLHFIPESLF*SNKKLA Trigger: GGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGG...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR-3UTR TCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAAAAGATAAAGAAAAGCTaGAGCCCCAGAGAGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YINKWNSLTRRSRLVLYEKIKKS*SPRELV Trigger: AACAAGCTCTCTGGGGCTTCAGCTTTTCTTTATCTT...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR CAA 90 bp | TACAGAAAGAGCCCCCGAGCTTCTCACAATTCGCTTACATTAATATaGATGTTGCCTGTGCAATCTATTTCCGTTATTTTTATGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YRKSPRASHNSLTLI*MLPVQSISVIFMVV Trigger: AACAACCATAAAAATAACGGAAATAGATTGCACAGGCAACATCAATATTAATGTAAGCGAATTGTGAGAAGCTCGGGGGCTCTTTCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR CCA 72 bp | AAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTaGCCCTGGGGCCTTTGGCGGTGTTCGGTCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KPQRACSDPTRN*PWGLWRCSVRQ Trigger: CTGCCTGACCGAACACCGCCAAAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR TCA 72 bp | ACAGAGGACAGTGGAGAAGCAGAATCATGCTTCCCCTaGCTCCTAACACATCTACACCCCTGCAGCCATAGC | + |
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Preference number: 3 (lower is better) Translates to: TEDSGEAESCFP*LLTHLHPCSHS Trigger: GCTATGGCTGCAGGGGTGTAGATGTGTTAGGAGTCAGGGGAAGCATGATTCTGCTTCTCCACTGTCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR CAA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGTTGGCCCTGGGGCCTTaGGCGGTGTTCGGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRLALGP*AVFGQA Trigger: TGCCTGACCGAACACCGCCAAAGGCCCCAGGGCCAA...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR GCA 72 bp | GGGGCAGCTGAACCCTTGAATGACTGTAAGTTCATTTaGAAGGCTACAGAAAGAGCCCCCGAGCTTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: GAAEPLNDCKFI*KATERAPELLT Trigger: TGTGAGAAGCTCGGGGGCTCTTTCTGTAGCCTTGCAAATGAACTTACAGTCATTCAAGGGTTCAGCTGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR CAA 90 bp | TACACCCTCTCGGAGAGCCAGCAGGGTAGCGTTCATTTATCAAGTTTATATGACATTCAGTACAAACAGTaGGCTTTCGGCCGCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: YTLSESQQGSVHLSSLYDIQYKQ*AFGRPS Trigger: GGAGGGGCGGCCGAAAGCCAACTGTTTGTACTGAAT...GTCATATAAACTTGATAAATGAACGCTACCCTGCTGGCTCTCCGAGAGGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR CCA 72 bp | CTTAGGCCTGTAACTTGCAGGACATACAGAGGACAGTaGAGAAGCAGAATCATGCTTCCCCTGACTCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LRPVTCRTYRGQ*RSRIMLPLTPN Trigger: GTTAGGAGTCAGGGGAAGCATGATTCTGCTTCTCCACTGTCCTCTGTATGTCCTGCAAGTTACAGGCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR GCA 72 bp | AGTTCTAGCTACGTTGTCTGCCTAATGGGGCGATCATaGAAGCGACAACAAGAGACAAAGAAACCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: SSSYVVCLMGRS*KRQQETKKPAS Trigger: GGATGCTGGTTTCTTTGTCTCTTGTTGTCGCTTGCATGATCGCCCCATTAGGCAGACAACGTAGCTAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR CAA 90 bp | CAACAAGAGACAAAGAAACCAGCATCCCTACCAGAGAACCTAACTTCTCCGAAGGTGTGGTTGTATATTTaGCCAAAAGCAATGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: QQETKKPASLPENLTSPKVWLYI*PKAMDS Trigger: GCTGTCCATTGCTTTTGGCAAAATATACAACCACAC...CTTCGGAGAAGTTAGGTTCTCTGGTAGGGATGCTGGTTTCTTTGTCTCTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR-3UTR CAA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATAATTCAGTACAAACAGTaGGCTTTCGGCCGCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HFTALKYSDFGTKCLHFIIQYKQ*AFGRPS Trigger: GGAGGGGCGGCCGAAAGCCAACTGTTTGTACTGAAT...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| 3UTR GCA 72 bp | TTTAATGTTGGGCTCACTGTCTACTGTCACTTTAAATaGAACACTGTTGATCAGTCTTCAACCTCCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: FNVGLTVYCHFK*NTVDQSSTSKA Trigger: AGCTTTGGAGGTTGAAGACTGATCAACAGTGTTGCATTTAAAGTGACAGTAGACAGTGAGCCCAACATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR GCA 72 bp | AGCTGTCCTAATCATTTGGTAGTATCCAGAATACAATaGAGTATGCAATATGAACCAATATGGCCTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SCPNHLVVSRIQ*SMQYEPIWPSA Trigger: GGCAGAAGGCCATATTGGTTCATATTGCATACTGCATTGTATTCTGGATACTACCAAATGATTAGGACAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR TCA 72 bp | TTTGGTAGTATCCAGAATACAATGCAGTATGCAATATaGACCAATATGGCCTTCTGCCTAGATCAAAATCCA | + |
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Preference number: 3 (lower is better) Translates to: FGSIQNTMQYAI*TNMAFCLDQNP Trigger: TGGATTTTGATCTAGGCAGAAGGCCATATTGGTTCATATTGCATACTGCATTGTATTCTGGATACTACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| 3UTR GCA 72 bp | TACGAATTCTTGACAGGACATGAAACAACATTTTACTaGACTAAAGTACTCAGACTTTGGGACGAAATGTTT | + |
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Preference number: 3 (lower is better) Translates to: YEFLTGHETTFY*TKVLRLWDEMF Trigger: AAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTGTTTCATGTCCTGTCAAGAATTCGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | TGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCCCGCGGCGTCCGTATaGCCGTGTGGGCCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: WRCSVRQPPSLPPPSALQPAASV*PCGPPK Trigger: CTTTGGGGGCCCACACGGCCATACGGACGCCGCGGG...CTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | TGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGGACGTGAAGGCTGTCTaGCCAGCCGAGGCCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: WRCSVRQPPSLPPPSALQDVKAV*PAEASS Trigger: CGAACTGGCCTCGGCTGGCCAGACAGCCTTCACGTC...CTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAGCGAAGAGACTGTGCTaGGCGCTAGCTGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQAKRLC*ALAAAA Trigger: GGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGC...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACTCATACCCCGAGCTaGCGGCGGGCGAAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQTHTPS*RRAKAV Trigger: CACAGCCTTCGCCCGCCGCCAGCTCGGGGTATGAGT...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGTGGCCGGCTGTGTGGTaGACCGCGGAGGAGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGWPAVW*TAEEEG Trigger: GCCCTCCTCCTCCGCGGTTCACCACACAGCCGGCCA...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | TGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGAGAAGCAGATGTGGTTaGTCTGCTCTGGGCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: WRCSVRQPPSLPPPSALQRSRCG*SALGRR Trigger: TCGGCGGCCCAGAGCAGAGCAACCACATCTGCTTCT...CTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR TCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTACGTGGCCGGGGTGGTaGTGGTGGCCCAGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLTWPGW*WWPRAA Trigger: TGCGGCCCTGGGCCACCATCACCACCCCGGCCACGT...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGCGCCGAAGCCCCGGTTaGGGAACAGAAAGTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGRRSPG*GTESPG Trigger: CCCGGGACTTTCTGTTCCGCAACCGGGGCTTCGGCG...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | TGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGTCCAGCCCCGTGATGTaGAGCCATGTTCACGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: WRCSVRQPPSLPPPSALQSSPVM*SHVHVH Trigger: ATGAACGTGAACATGGCTGCACATCACGGGGCTGGA...CTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAATTGTGGGAGACACGATaGTGGGTGGCGTGGACGACT | + |
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Preference number: 4 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQLWETR*WVAWTT Trigger: AGTCGTCCACGCCACCCACCATCGTGTCTCCCACAA...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR TCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTCGTCGGCGAACGGGTTaGTACCCAGGCCCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLRRRTG*YPGPRL Trigger: GAGACGTGGGCCTGGGTATCAACCCGTTCGCCGACG...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGCGAGTGGTGCCGGGATaGACCAAAGGTGGTCACACC | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGRVVPG*TKGGHT Trigger: GGTGTGACCACCTTTGGTGCATCCCGGCACCACTCG...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTACTCATACCCCGAGCTaGCGGCGGGCGAAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLTHTPS*RRAKAV Trigger: CACAGCCTTCGCCCGCCGCCAGCTCGGGGTATGAGT...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGAGGAGGAGGGCGACATaGAGCTGGTGGTCGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGRRRAT*SWWSGC Trigger: ACAACCCGACCACCAGCTCCATGTCGCCCTCCTCCT...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGTCGCTCGTGTGCACGTaGATGTGCTTCTTGCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGSLVCT*MCFLRS Trigger: CGACCGCAAGAAGCACATGCACGTGCACACGAGCGA...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGTGGGAGACACGATGGTaGGTGGCGTGGACGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGWETRW*VAWTTH Trigger: ATGAGTCGTCCACGCCACCCACCATCGTGTCTCCCA...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGAGGGCGACATGGAGCTaGTGGTCGGGTTGTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGRATWS*WSGCLL Trigger: CAACAGACAACCCGACCACCAGCTCCATGTCGCCCT...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTGCCGAGGCCAGTTCGTaGGAACTGGGGTTGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLAEASS*ELGLSL Trigger: CAAGCTCAACCCCAGTTCGCACGAACTGGCCTCGGC...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTGTACTGTTCCGGCCGTaGGTACATGTCCCCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLVLFRP*VHVPGE Trigger: TTCTCCGGGGACATGTACCCACGGCCGGAACAGTAC...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGCCATGTTCACGTTCATaGGCCCATAGCCGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPPPSALQLPNLFRGGPCSRS*AHSREA Trigger: AGCTTCACGGCTATGGGCCCATGAACGTGAACATGG...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCCCAGAGAGCTTGTTCTGATCCAACAAGAAATTGGCCCTGGGGCCTTAGACACGATGGTGGGTaGCGTGGACGACTCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: LKPQRACSDPTRNWPWGLRHDGG*RGRLIP Trigger: GGGTATGAGTCGTCCACGCCACCCACCATCGTGTCT...AAGGCCCCAGGGCCAATTTCTTGTTGGATCAGAACAAGCTCTCTGGGGCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR TCA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGTGGCCGGCTGTGTGGTaGACCGCGGAGGAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRWPAVW*TAEEEG Trigger: GCCCTCCTCCTCCGCGGTTCACCACACAGCCGGCCA...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGAACGTCGCCCGCCGAGTaGTGCCGGGATGCACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGTSPAE*CRDAPK Trigger: CTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGT...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGCCCGCGGCGTCCGTATaGCCGTGTGGGCCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLPAASV*PCGPPK Trigger: CTTTGGGGGCCCACACGGCCATACGGACGCCGCGGG...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGCGCGGGCTGGTCACCTaGCCGTACTGTTCCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: THLLEHSCHSVQTVGFRPRGLVT*PYCSGR Trigger: ACGGCCGGAACAGTACGGCCAGGTGACCAGCCCGCG...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TACACCCTCTCGGAGAGCCAGCAGGGTAGCGTTCATTTATCAAGTTTATATGACGCTCGGATCGCGGGCTaGTCACCTGGCCGTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTLSESQQGSVHLSSLYDARIAG*SPGRTV Trigger: AACAGTACGGCCAGGTGACCAGCCCGCGATCCGAGC...GTCATATAAACTTGATAAATGAACGCTACCCTGCTGGCTCTCCGAGAGGGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGAGACGTGAAGGCTGTCTaGCCAGCCGAGGCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGDVKAV*PAEASS Trigger: CGAACTGGCCTCGGCTGGCCAGACAGCCTTCACGTC...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGGCGAAGAGACTGTGCTaGGCGCTAGCTGCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLAKRLC*ALAAAA Trigger: GGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGC...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCGCGGGCTGGTCACCTaGCCGTACTGTTCCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRRGLVT*PYCSGR Trigger: ACGGCCGGAACAGTACGGCCAGGTGACCAGCCCGCG...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR TCA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCGTCGGCGAACGGGTTaGTACCCAGGCCCACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRRRRTG*YPGPRL Trigger: GAGACGTGGGCCTGGGTATCAACCCGTTCGCCGACG...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR TCA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATAACGTGGCCGGGGTGGTaGTGGTGGCCCAGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HFTALKYSDFGTKCLHFITWPGW*WWPRAA Trigger: TGCGGCCCTGGGCCACCATCACCACCCCGGCCACGT...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGCCAATCGCGGGATACTaGGGTCCGGCGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLPIAGY*GPASRS Trigger: GCTCCTGGACGCCGGACCCCAGTATCCCGCGATTGG...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCAATCGCGGGATACTaGGGTCCGGCGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRPIAGY*GPASRS Trigger: GCTCCTGGACGCCGGACCCCAGTATCCCGCGATTGG...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGGCTCGGATCGCGGGCTaGTCACCTGGCCGTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: THLLEHSCHSVQTVGFRPARIAG*SPGRTV Trigger: AACAGTACGGCCAGGTGACCAGCCCGCGATCCGAGC...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGAAGGGCGACATGGAGCTaGTGGTCGGGTTGTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGRATWS*WSGCLL Trigger: CAACAGACAACCCGACCACCAGCTCCATGTCGCCCT...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGACGACTTTTTGGGGTTaGCCAGCTGCTCCGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: THLLEHSCHSVQTVGFRPTTFWG*PAAPAR Trigger: TCGAGCCGGAGCAGCTGGCCAACCCCAAAAAGTCGT...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGACAGGATGTTGCACGACTTTTTaGGGTTGGCCAGCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLTRRSRLVLYEFLTGCCTTF*GWPAAP Trigger: CGGAGCAGCTGGCCAACCCCAAAAAGTCGTGCAACA...TCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGTGGGAGACACGATGGTaGGTGGCGTGGACGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: THLLEHSCHSVQTVGFRPWETRW*VAWTTH Trigger: ATGAGTCGTCCACGCCACCCACCATCGTGTCTCCCA...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGTTGTGGGAGACACGATaGTGGGTGGCGTGGACGACT | + |
|
Preference number: 4 (lower is better) Translates to: THLLEHSCHSVQTVGFRPLWETR*WVAWTT Trigger: AGTCGTCCACGCCACCCACCATCGTGTCTCCCACAA...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR TCA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGGAAGGCTGTGAGCCCTaGGAAGAGGACTCATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLEGCEP*EEDSWT Trigger: GGTCCATGAGTCCTCTTCTCAGGGCTCACAGCCTTC...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAACGAGTGGTGCCGGGATaGACCAAAGGTGGTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYERVVPG*TKGGHT Trigger: GGTGTGACCACCTTTGGTGCATCCCGGCACCACTCG...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGAGACACGATGGTGGGTaGCGTGGACGACTCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLRHDGG*RGRLIP Trigger: GGGTATGAGTCGTCCACGCCACCCACCATCGTGTCT...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAAAGGAGGAGGGCGACATaGAGCTGGTGGTCGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYERRRAT*SWWSGC Trigger: ACAACCCGACCACCAGCTCCATGTCGCCCTCCTCCT...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGTTGGGGTTGGCCAGCTaGTCCGGCTCGATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRLGLAS*SGSIHL Trigger: TAAATGGATCGAGCCGGAGCAGCTGGCCAACCCCAA...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR GCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAAAGAAGCAGATGTGGTTaGTCTGCTCTGGGCCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYERSRCG*SALGRR Trigger: TCGGCGGCCCAGAGCAGAGCAACCACATCTGCTTCT...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAAGTACTGTTCCGGCCGTaGGTACATGTCCCCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYEVLFRP*VHVPGE Trigger: TTCTCCGGGGACATGTACCCACGGCCGGAACAGTAC...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATAGCCGAGGCCAGTTCGTaGGAACTGGGGTTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTALKYSDFGTKCLHFIAEASS*ELGLSL Trigger: CAAGCTCAACCCCAGTTCGCACGAACTGGCCTCGGC...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATCGGGTTGTCTGTTGTaGGAGACACGATGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYESGCLL*ETRWWV Trigger: CACCCACCATCGTGTCTCCCACAACAGACAACCCGA...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTGCGACATGGAGCTGGTaGTCGGGTTGTCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHFTALKYSDFGTKCLHFATWSW*SGCLLW Trigger: CCACAACAGACAACCCGACCACCAGCTCCATGTCGC...AAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR GCA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATCCAGCCCCGTGATGTaGAGCCATGTTCACGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YINKWNSLTRRSRLVLYESSPVM*SHVHVH Trigger: ATGAACGTGAACATGGCTGCACATCACGGGGCTGGA...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTTTGGGGTTGGCCAGCTaGTCCGGCTCGATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QHFTALKYSDFGTKCLHFLGLAS*SGSIHL Trigger: TAAATGGATCGAGCCGGAGCAGCTGGCCAACCCCAA...AAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATATCGCTCGTGTGCACGTaGATGTGCTTCTTGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HFTALKYSDFGTKCLHFISLVCT*MCFLRS Trigger: CGACCGCAAGAAGCACATGCACGTGCACACGAGCGA...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTCCATGTTCACGTTCATaGGCCCATAGCCGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHFTALKYSDFGTKCLHFPCSRS*AHSREA Trigger: AGCTTCACGGCTATGGGCCCATGAACGTGAACATGG...AAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | CATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTATATGTTGCACGACTTTTTaGGGTTGGCCAGCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HFTALKYSDFGTKCLHFICCTTF*GWPAAP Trigger: CGGAGCAGCTGGCCAACCCCAAAAAGTCGTGCAACA...TATAAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCATGCATCGGCATCCTGAAAATTAGTTATGGCCATAATGGTTTAATTGAATCGGGTTGTCTGTTGTaGGAGACACGATGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KACIGILKISYGHNGLIESGCLL*ETRWWV Trigger: CACCCACCATCGTGTCTCCCACAACAGACAACCCGA...TTCAATTAAACCATTATGGCCATAACTAATTTTCAGGATGCCGATGCATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| 3UTR CAA 72 bp | CTACCAGAGAACCTAACTTCTCCGAAGCAGCATAGCTaGCAAATCTATCAAACTAAACTGCAAGAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPENLTSPKQHS*QIYQTKLQERQ Trigger: TTGTCTTTCTTGCAGTTTAGTTTGATAGATTTGCAAGCTATGCTGCTTCGGAGAAGTTAGGTTCTCTGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| 3UTR CAA 72 bp | TTGACACGTAGATCCAGGCTCGTACTATACGAATTCTaGACAGGACATGAAACAACATTTTACTGCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTRRSRLVLYEF*TGHETTFYCTK Trigger: TTTAGTGCAGTAAAATGTTGTTTCATGTCCTGTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| 3UTR CAA 72 bp | AAGATGAACTCTCTATTCCTCTTCCTGTGTTTAATGTaGGGCTCACTGTCTACTGTCACTTTAAATGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KMNSLFLFLCLM*GSLSTVTLNAT Trigger: TGTTGCATTTAAAGTGACAGTAGACAGTGAGCCCAACATTAAACACAGGAAGAGGAATAGAGAGTTCATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| 3UTR CAA 72 bp | CCAATATCCAATATCGCTGTTATAAGCAGAGAAACTTaGTTCTTTACAGTTAAACATCAATATCCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISNIAVISRET*FFTVKHQYPHP Trigger: AGGGTGGGGATATTGATGTTTAACTGTAAAGAACAAAGTTTCTCTGCTTATAACAGCGATATTGGATATTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| 3UTR CAA 72 bp | AAAAATATAAGTGAAACGCTTTATGGACATTTACTTTaGTACAAAGATGGAAGGCCTGGAAAAGCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KNISETLYGHLL*YKDGRPGKACI Trigger: GATGCATGCTTTTCCAGGCCTTCCATCTTTGTACAAAAGTAAATGTCCATAAAGCGTTTCACTTATATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
||
| CDS GCA 90 bp | CCGTGTGGGCCCCCAAAGCCGCCGGCCGAAGCAGCGAAGAGACTGTaGTGGGCGCTAGCTGCCGCCGCCGCGTCGCCGAAGCCCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCGPPKPPAEAAKRL*WALAAAAASPKPRL Trigger: CAACCGGGGCTTCGGCGACGCGGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGCTGCTTCGGCCGGCGGCTTTGGGGGCCCACACGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS CCA 90 bp | TGTGGGCCCCCAAAGCCGCCGGCCGAAGCAGCGAAGAGACTGTGCTaGGCGCTAGCTGCCGCCGCCGCGTCGCCGAAGCCCCGGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGPPKPPAEAAKRLC*ALAAAAASPKPRLR Trigger: CCGCAACCGGGGCTTCGGCGACGCGGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGCTGCTTCGGCCGGCGGCTTTGGGGGCCCACA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
||
| CDS GCA 90 bp | GCCCACGTCTCTCTCGGCCACGTCGCCCGCCGAGTGGTGCCGGGATaGACCAAAGGTGGTCACACCAATCGCGGGATACTGGGGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHVSLGHVARRVVPG*TKGGHTNRGILGSG Trigger: GCCGGACCCCAGTATCCCGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGAGACGTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 90 bp | AAAGCCGCCGGCCGAAGCAGCGAAGAGACTGTGCTGGGCGCTAGCTaGCGCCGCCGCGTCGCCGAAGCCCCGGTTGCGGAACAGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KAAGRSSEETVLGAS*RRRVAEAPVAEQKV Trigger: GACTTTCTGTTCCGCAACCGGGGCTTCGGCGACGCGGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGCTGCTTCGGCCGGCGGCTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 90 bp | TCTCGGCCACGTCGCCCGCCGAGTGGTGCCGGGATGCACCAAAGGTaGTCACACCAATCGCGGGATACTGGGGTCCGGCGTCCAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: SRPRRPPSGAGMHQR*SHQSRDTGVRRPGA Trigger: TGCTCCTGGACGCCGGACCCCAGTATCCCGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 90 bp | CATAGCCGTGAAGCTGCGGGGCAGCATAGTGCTCGGATCGCGGGCTaGTCACCTGGCCGTACTGTTCCGGCCGTGGGTACATGTCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: HSREAAGQHSARIAG*SPGRTVPAVGTCPR Trigger: CCGGGGACATGTACCCACGGCCGGAACAGTACGGCCAGGTGACCAGCCCGCGATCCGAGCACTATGCTGCCCCGCAGCTTCACGGCTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 90 bp | ATACCCAGGCCCACGTCTCTCTCGGCCACGTCGCCCGCCGAGTGGTaGCGGGATGCACCAAAGGTGGTCACACCAATCGCGGGATACTGG | + |
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Preference number: 5 (lower is better) Translates to: IPRPTSLSATSPAEW*RDAPKVVTPIAGYW Trigger: CCAGTATCCCGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGAGACGTGGGCCTGGGTAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 90 bp | TGTTCCGGCCGTGGGTACATGTCCCCGGAGAAACCTAGCCGCATCTaGCCGTTAACCACGTTGGGCGAAGCGTGGCCAGCCGCCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: CSGRGYMSPEKPSRI*PLTTLGEAWPAACS Trigger: CGAGCAGGCGGCTGGCCACGCTTCGCCCAACGTGGTTAACGGGCAGATGCGGCTAGGTTTCTCCGGGGACATGTACCCACGGCCGGAACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 90 bp | TTGATACCCAGGCCCACGTCTCTCTCGGCCACGTCGCCCGCCGAGTaGTGCCGGGATGCACCAAAGGTGGTCACACCAATCGCGGGATAC | + |
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Preference number: 5 (lower is better) Translates to: LIPRPTSLSATSPAE*CRDAPKVVTPIAGY Trigger: GTATCCCGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGAGACGTGGGCCTGGGTATCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAACCGTCGGCGAACGGGTaGATACCCAGGCCCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQPSANG*IPRPTS Trigger: AGACGTGGGCCTGGGTATCAACCCGTTCGCCGACGG...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAATCGCCGAAGCCCCGGTaGCGGAACAGAAAGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQSPKPR*RNRKSR Trigger: CCGGGACTTTCTGTTCCGCAACCGGGGCTTCGGCGA...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAGAACTGGGGTTGAGCTaGAAGGCGCCCATGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQELGLS*KAPMPS Trigger: CGACGGCATGGGCGCCTTCAAGCTCAACCCCAGTTC...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 90 bp | GGAAGAAGGCTCCAGCCCCGTGATGTGCAGCCATGTTCACGTTCATaGGCCCATAGCCGTGAAGCTGCGGGGCAGCATAGTGCTCGGATC | + |
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Preference number: 5 (lower is better) Translates to: GRRLQPRDVQPCSRS*AHSREAAGQHSARI Trigger: GATCCGAGCACTATGCTGCCCCGCAGCTTCACGGCTATGGGCCCATGAACGTGAACATGGCTGCACATCACGGGGCTGGAGCCTTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGCCGTCGGCGAACGGGTaGATACCCAGGCCCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: PSLPPPSALQLPNLFRGGPSANG*IPRPTS Trigger: AGACGTGGGCCTGGGTATCAACCCGTTCGCCGACGG...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | TGGCGGTGTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGTTTACAGATAAGCTCTaGCTTGATGGGTTGGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: WRCSVRQPPSLPPPSALQFTDKL*LDGLAH Trigger: ATGCGCCAACCCATCAAGCAAGAGCTTATCTGTAAA...CTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAACACCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GTTCGGTCAGGCAGCCGCCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAATTTACAGATAAGCTCTaGCTTGATGGGTTGGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: VRSGSRLLFHPLPPFSYQFTDKL*LDGLAH Trigger: ATGCGCCAACCCATCAAGCAAGAGCTTATCTGTAAA...TTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGGCGGCTGCCTGACCGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTTCCACCCCCTTCCGCCCTTCAGCTACCAAACCTTTTCAGAGGTGGGTACCATTCGTTAAAATaGGAAGAGAGCGCGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PSLPPPSALQLPNLFRGGYHSLK*EESALW Trigger: CCACAGCGCGCTCTCTTCCAATTTTAACGAATGGTA...CCCACCTCTGAAAAGGTTTGGTAGCTGAAGGGCGGAAGGGGGTGGAAGAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGCAGAAGCAGATGTGGTaGCTCTGCTCTGGGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: THLLEHSCHSVQTVGFRPQKQMW*LCSGPP Trigger: CGGCGGCCCAGAGCAGAGCAACCACATCTGCTTCTG...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGGAACTGGGGTTGAGCTaGAAGGCGCCCATGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLELGLS*KAPMPS Trigger: CGACGGCATGGGCGCCTTCAAGCTCAACCCCAGTTC...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCACGACTTTTTGGGGTaGGCCAGCTGCTCCGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRHDFLG*ASCSGS Trigger: CGAGCCGGAGCAGCTGGCCAACCCCAAAAAGTCGTG...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | AACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAATTCTTGCAGAAGCAGATGTGGTaGCTCTGCTCTGGGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: NKWNSLTRRSRLVLYEFLQKQMW*LCSGPP Trigger: CGGCGGCCCAGAGCAGAGCAACCACATCTGCTTCTG...CAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | TACATAAACAAATGGAACAGTTTGACACGTAGATCCAGGCTCGTACTATACGAACACGACTTTTTGGGGTaGGCCAGCTGCTCCGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: YINKWNSLTRRSRLVLYEHDFLG*ASCSGS Trigger: CGAGCCGGAGCAGCTGGCCAACCCCAAAAAGTCGTG...TTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCATTTGTTTATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | ACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGCCGTGGTCGGGTTGTCTGTaGTGGGAGACACGATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: THLLEHSCHSVQTVGFRPWSGCL*WETRWW Trigger: CCACCATCGTGTCTCCCACAACAGACAACCCGACCA...CGGCCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGTTGTTGCACGACTTTTaGGGGTTGGCCAGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRLLHDF*GLASCS Trigger: GGAGCAGCTGGCCAACCCCAAAAAGTCGTGCAACAA...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | CAACATTTTACTGCACTAAAGTACTCAGACTTTGGGACGAAATGTTTGCACTTTTTGTTGCACGACTTTTaGGGGTTGGCCAGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QHFTALKYSDFGTKCLHFLLHDF*GLASCS Trigger: GGAGCAGCTGGCCAACCCCAAAAAGTCGTGCAACAA...AAAGTGCAAACATTTCGTCCCAAAGTCTGAGTACTTTAGTGCAGTAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATGCATCGGCATCCTGAAAATTAGTTATGGCCATAATGGTTTAATTGAATGGTCGGGTTGTCTGTaGTGGGAGACACGATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: KACIGILKISYGHNGLIEWSGCL*WETRWW Trigger: CCACCATCGTGTCTCCCACAACAGACAACCCGACCA...TTCAATTAAACCATTATGGCCATAACTAATTTTCAGGATGCCGATGCATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034927.13 |
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| CDS-3UTR CAA 90 bp | GGTACACATTTACTAGAACATTCTTGCCATTCAGTACAAACAGTTGGCTTTCGGTACCATTCGTTAAAATaGGAAGAGAGCGCGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GTHLLEHSCHSVQTVGFRYHSLK*EESALW Trigger: CCACAGCGCGCTCTCTTCCAATTTTAACGAATGGTA...CCGAAAGCCAACTGTTTGTACTGAATGGCAAGAATGTTCTAGTAAATGTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 72 bp | CCCCCAAAGCCGCCGGCCGAAGCAGCGAAGAGACTGTaGTGGGCGCTAGCTGCCGCCGCCGCGTCGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPKPPAEAAKRL*WALAAAAASPK Trigger: CTTCGGCGACGCGGCGGCGGCAGCTAGCGCCCAGCACAGTCTCTTCGCTGCTTCGGCCGGCGGCTTTGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 72 bp | AAAAAGGAGGTGGCCCGCGGCGTCCGTATGGCCGTGTaGGCCCCCAAAGCCGCCGGCCGAAGCAGCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: KKEVARGVRMAV*APKAAGRSSEE Trigger: CTCTTCGCTGCTTCGGCCGGCGGCTTTGGGGGCCCACACGGCCATACGGACGCCGCGGGCCACCTCCTTTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CAA 90 bp | GAACTGGGGTTGAGCTTGAAGGCGCCCATGCCGTCGGCGAACGGGTaGATACCCAGGCCCACGTCTCTCTCGGCCACGTCGCCCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: ELGLSLKAPMPSANG*IPRPTSLSATSPAE Trigger: CTCGGCGGGCGACGTGGCCGAGAGAGACGTGGGCCTGGGTATCAACCCGTTCGCCGACGGCATGGGCGCCTTCAAGCTCAACCCCAGTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 72 bp | CCCACGTCTCTCTCGGCCACGTCGCCCGCCGAGTGGTaGCGGGATGCACCAAAGGTGGTCACACCAATCGCG | + |
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Preference number: 6 (lower is better) Translates to: PTSLSATSPAEW*RDAPKVVTPIA Trigger: CGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGAGACGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CAA 90 bp | GCTGTCTGGCCAGCCGAGGCCAGTTCGTGCGAACTGGGGTTGAGCTaGAAGGCGCCCATGCCGTCGGCGAACGGGTTGATACCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVWPAEASSCELGLS*KAPMPSANGLIPRP Trigger: GGGCCTGGGTATCAACCCGTTCGCCGACGGCATGGGCGCCTTCAAGCTCAACCCCAGTTCGCACGAACTGGCCTCGGCTGGCCAGACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 72 bp | AGGCCCACGTCTCTCTCGGCCACGTCGCCCGCCGAGTaGTGCCGGGATGCACCAAAGGTGGTCACACCAATC | + |
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Preference number: 6 (lower is better) Translates to: RPTSLSATSPAE*CRDAPKVVTPI Trigger: GATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGAGACGTGGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 72 bp | GAAGCTGCGGGGCAGCATAGTGCTCGGATCGCGGGCTaGTCACCTGGCCGTACTGTTCCGGCCGTGGGTACA | + |
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Preference number: 6 (lower is better) Translates to: EAAGQHSARIAG*SPGRTVPAVGT Trigger: TGTACCCACGGCCGGAACAGTACGGCCAGGTGACCAGCCCGCGATCCGAGCACTATGCTGCCCCGCAGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 72 bp | TCTCTCGGCCACGTCGCCCGCCGAGTGGTGCCGGGATaGACCAAAGGTGGTCACACCAATCGCGGGATACTG | + |
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Preference number: 6 (lower is better) Translates to: SLGHVARRVVPG*TKGGHTNRGIL Trigger: CAGTATCCCGCGATTGGTGTGACCACCTTTGGTGCATCCCGGCACCACTCGGCGGGCGACGTGGCCGAGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CAA 72 bp | TTGAGCTTGAAGGCGCCCATGCCGTCGGCGAACGGGTaGATACCCAGGCCCACGTCTCTCTCGGCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSLKAPMPSANG*IPRPTSLSATS Trigger: CGACGTGGCCGAGAGAGACGTGGGCCTGGGTATCAACCCGTTCGCCGACGGCATGGGCGCCTTCAAGCTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS GCA 72 bp | CGTGGGTACATGTCCCCGGAGAAACCTAGCCGCATCTaGCCGTTAACCACGTTGGGCGAAGCGTGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RGYMSPEKPSRI*PLTTLGEAWPA Trigger: GGCTGGCCACGCTTCGCCCAACGTGGTTAACGGGCAGATGCGGCTAGGTTTCTCCGGGGACATGTACCCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CAA 72 bp | CCAGCCGAGGCCAGTTCGTGCGAACTGGGGTTGAGCTaGAAGGCGCCCATGCCGTCGGCGAACGGGTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: PAEASSCELGLS*KAPMPSANGLI Trigger: TATCAACCCGTTCGCCGACGGCATGGGCGCCTTCAAGCTCAACCCCAGTTCGCACGAACTGGCCTCGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CAA 72 bp | AGGAGGGCGACATGGAGCTGGTGGTCGGGTTGTCTGTaGTGGGAGACACGATGGTGGGTGGCGTGGACGACT | + |
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Preference number: 6 (lower is better) Translates to: RRATWSWWSGCL*WETRWWVAWTT Trigger: AGTCGTCCACGCCACCCACCATCGTGTCTCCCACAACAGACAACCCGACCACCAGCTCCATGTCGCCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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| CDS CCA 72 bp | CTCCAGCCCCGTGATGTGCAGCCATGTTCACGTTCATaGGCCCATAGCCGTGAAGCTGCGGGGCAGCATAGT | + |
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Preference number: 6 (lower is better) Translates to: LQPRDVQPCSRS*AHSREAAGQHS Trigger: ACTATGCTGCCCCGCAGCTTCACGGCTATGGGCCCATGAACGTGAACATGGCTGCACATCACGGGGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034927.13 ENSMUST00000065360.5 |
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